Citrus Sinensis ID: 047713

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
Protein Sequence
MGFDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMDG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEEEEEcccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccEEEccEEEEEEEEcccccccEEEEccEEEEEcccccccEEEEEccccccccccEEEEcccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHccccEEcccccccccHHHHHHHHccccccEEEEccccHHHHHHHHHHcccccEEEEEEEEccccccEEEcccccccccEEEEEEcccccccccHHHHHHHHHcccccccccEEccccHHHHHHHHHHHHccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccEEEEccccccccEEccccEEEEEEEEcccccccccccEEEEcccccccccccccccccccccccccccccccccccccccEEEccEEEEccccccccEcEEEEEHHHEEEccccccHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccEEEcHHHccccHHHHHHHHccccEcEEEEccccHHHHHHHHHcEcccccEEEEcccccccccEEEccHHHHcccEEEEccHHHccHHHHHHHHHHHHHccccccHHHEEEEEEHHHcHHHHHHHHHccccEEEEEccc
Coil and Loop (DISEMBL)
mgfdkrwgqtplfprifgheaggivesvgegvtdlqpgdhvlpvftgeckecphchseesnmcdllrintdrgvmindgqsrfsikgkpiyhfvgtstfsEYTVTHVGcvakinpaapldkvcvlscgistgfgatvnvakpkkgqsvaIFGLGAVGLAAAEgarvsgasriigvdlnpsrfneakkfgvtefvnpkdydkpVQQVIADMtnggvdrsveCTGSVQAMISAFECVHDGWGVAVLvgvpnkddafkthpmnllnertlkgtffgnykprsdlpSVVEKYMNKELEVEKFithtvpfseINKAFDLMLAGESIRCIIRMDG
Flexible Loop (DISEMBL)
MGFDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGqsrfsikgkpIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGasriigvdlnpsrfNEAKKFgvtefvnpkdydKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMDG
Low Complexity Region (SEG)
MGFDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFglgavglaaaegaRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMDG
Disordered region (IsUnstruct)
******WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR***
Disordered Region (DISOPRED)
MGFDK**GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD*
Disordered Region (DISEMBL)
MGFDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMDG
Disordered Region (DISPRO)
MGFDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMDG
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGFDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMDG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	329	2.2.26 [Sep-21-2011]
P25141	382	Alcohol dehydrogenase 1 O	N/A	no	0.990	0.853	0.868	1e-168
P14673	380	Alcohol dehydrogenase 1 O	N/A	no	0.990	0.857	0.858	1e-167
P14674	380	Alcohol dehydrogenase 2 O	N/A	no	0.990	0.857	0.855	1e-167
P14675	380	Alcohol dehydrogenase 3 O	N/A	no	0.990	0.857	0.855	1e-167
P12886	380	Alcohol dehydrogenase 1 O	N/A	no	0.990	0.857	0.855	1e-166
Q2R8Z5	379	Alcohol dehydrogenase 1 O	yes	no	0.990	0.860	0.855	1e-166
Q75ZX4	379	Alcohol dehydrogenase 1 O	N/A	no	0.990	0.860	0.855	1e-166
P06525	379	Alcohol dehydrogenase cla	yes	no	0.987	0.857	0.855	1e-166
P14219	379	Alcohol dehydrogenase 1 O	N/A	no	0.990	0.860	0.852	1e-166
P13603	380	Alcohol dehydrogenase 1 O	N/A	no	0.990	0.857	0.852	1e-165

>sp|P25141|ADH1_PETHY Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1

 Score =  590 bits (1522), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 284/327 (86%), Positives = 306/327 (93%), Gaps = 1/327 (0%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTPLFPRIFGHEAGGIVESVGEGVTDL+PGDHVLPVFTGEC++C HC SEESNM
Sbjct: 55  FWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNM 114

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINTDRGVMI+DGQ+RFS  GKPIYHFVGTSTFSEYTV H GCV KI+P APLDKV
Sbjct: 115 CDLLRINTDRGVMIHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKV 174

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTG GAT+NVAKP KG +VAIFGLGAVGLAAAEGAR++GASRIIGVDLNPSRF
Sbjct: 175 CVLSCGISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRF 234

Query: 183 NEAKKFGVTEFVNPKDY-DKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGV 241
           N+AKKFGVTEFVNPKD+ DKPVQQVIA+MT+GGVDRSVECTG+V AMISAFECVHDGWGV
Sbjct: 235 NDAKKFGVTEFVNPKDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGV 294

Query: 242 AVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITH 301
           AVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKP+SD+PSVV+KYM KELE+EKFITH
Sbjct: 295 AVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITH 354

Query: 302 TVPFSEINKAFDLMLAGESIRCIIRMD 328
            VPFSEINKAFD ML GESIRC+I M+
Sbjct: 355 QVPFSEINKAFDYMLKGESIRCMITME 381

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.
Petunia hybrida (taxid: 4102)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|P14673|ADH1_SOLTU Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1

 Score =  587 bits (1514), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 280/326 (85%), Positives = 300/326 (92%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQ P+FPRI GHEA GIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESNM
Sbjct: 54  FWEAKGQNPVFPRILGHEAAGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNM 113

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           C LLRINTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKV
Sbjct: 114 CSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKV 173

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTG GAT+NVAKP KG SVAIFGLGAVGLAAAEGAR++GASRIIGVDLN SRF
Sbjct: 174 CVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRF 233

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
            +AKKFGVTEFVNPKDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECVHDGWGVA
Sbjct: 234 EQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVA 293

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVP+K+  FKTHPMNLLNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT
Sbjct: 294 VLVGVPHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHT 353

Query: 303 VPFSEINKAFDLMLAGESIRCIIRMD 328
           +PF+EINKAFDLML GE +RCII M+
Sbjct: 354 LPFAEINKAFDLMLKGEGLRCIITME 379

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14674|ADH2_SOLTU Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1

 Score =  587 bits (1513), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 279/326 (85%), Positives = 299/326 (91%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQ P+FPRI GHEA GIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESNM
Sbjct: 54  FWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNM 113

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           C LLRINTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKV
Sbjct: 114 CSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKV 173

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTG GAT+NVAKP KG SVAIFGLGAVGLAAAEGAR++GASRIIGVDLN SRF
Sbjct: 174 CVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRF 233

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
            +AKKFGVTEFVNPKDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECVHDGWGVA
Sbjct: 234 EQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVA 293

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT
Sbjct: 294 VLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHT 353

Query: 303 VPFSEINKAFDLMLAGESIRCIIRMD 328
           +PF+EINKAFDLML GE +RCII M+
Sbjct: 354 LPFAEINKAFDLMLKGEGLRCIITME 379

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14675|ADH3_SOLTU Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1

 Score =  587 bits (1512), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 279/326 (85%), Positives = 299/326 (91%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQ P+FPRI GHEA GIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESNM
Sbjct: 54  FWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNM 113

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           C LLRINTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKV
Sbjct: 114 CSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKV 173

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTG GAT+NVAKP KG SVAIFGLGAVGLAAAEGAR++GASRIIGVDLN SRF
Sbjct: 174 CVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRF 233

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
            +AKKFGVTEFVNPKDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECVHDGWGVA
Sbjct: 234 EQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVA 293

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT
Sbjct: 294 VLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHT 353

Query: 303 VPFSEINKAFDLMLAGESIRCIIRMD 328
           +PF+EINKAFDLML GE +RCII M+
Sbjct: 354 LPFAEINKAFDLMLKGEGLRCIITME 379

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P12886|ADH1_PEA Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1

 Score =  585 bits (1509), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 279/326 (85%), Positives = 301/326 (92%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTPLFPRIFGHEAGGIVESVGEGVT L+PGDH LPVFTGEC ECPHC SEESNM
Sbjct: 54  FWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNM 113

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINTDRGVM+ND +SRFSIKG+P++HFVGTSTFSEYTV H GCVAKINP APLDKV
Sbjct: 114 CDLLRINTDRGVMLNDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKV 173

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           C+LSCGI TG GAT+NVAKPK G SVAIFGLGAVGLAAAEGAR+SGASRIIGVDL  SRF
Sbjct: 174 CILSCGICTGLGATINVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRF 233

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
             AKKFGV EFVNPK++DKPVQQVIA+MTNGGVDR+VECTGS+QAMISAFECVHDGWGVA
Sbjct: 234 ELAKKFGVNEFVNPKEHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVA 293

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVP+KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVEKYM  ELE+EKFITHT
Sbjct: 294 VLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHT 353

Query: 303 VPFSEINKAFDLMLAGESIRCIIRMD 328
           VPFSEINKAFD ML GESIRCII+M+
Sbjct: 354 VPFSEINKAFDYMLKGESIRCIIKME 379

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q2R8Z5|ADH1_ORYSJ Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2

 Score =  584 bits (1506), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 279/326 (85%), Positives = 299/326 (91%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTP+FPRIFGHEAGGIVESVGEGVTDL PGDHVLPVFTGECKEC HC S ESNM
Sbjct: 53  FWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNM 112

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINPAAPLDKV
Sbjct: 113 CDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKV 172

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTG GAT+NVAKP KG +VAIFGLGAVGLAAAEGAR++GASRIIG+DLN +RF
Sbjct: 173 CVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRF 232

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
            EA+KFG TEFVNPKD+DKPVQQV+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVA
Sbjct: 233 EEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVA 292

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+
Sbjct: 293 VLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHS 352

Query: 303 VPFSEINKAFDLMLAGESIRCIIRMD 328
           VPFSEIN AFDLM  GE IRCIIRM+
Sbjct: 353 VPFSEINTAFDLMHKGEGIRCIIRME 378

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q75ZX4|ADH1_ORYSI Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1

 Score =  584 bits (1506), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 279/326 (85%), Positives = 299/326 (91%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTP+FPRIFGHEAGGIVESVGEGVTDL PGDHVLPVFTGECKEC HC S ESNM
Sbjct: 53  FWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNM 112

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINPAAPLDKV
Sbjct: 113 CDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKV 172

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTG GAT+NVAKP KG +VAIFGLGAVGLAAAEGAR++GASRIIG+DLN +RF
Sbjct: 173 CVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRF 232

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
            EA+KFG TEFVNPKD+DKPVQQV+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVA
Sbjct: 233 EEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVA 292

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+
Sbjct: 293 VLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHS 352

Query: 303 VPFSEINKAFDLMLAGESIRCIIRMD 328
           VPFSEIN AFDLM  GE IRCIIRM+
Sbjct: 353 VPFSEINTAFDLMHKGEGIRCIIRME 378

Oryza sativa subsp. indica (taxid: 39946)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P06525|ADH1_ARATH Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2

 Score =  584 bits (1505), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 278/325 (85%), Positives = 302/325 (92%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLP+FTGEC EC HCHSEESNM
Sbjct: 53  FWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNM 112

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINT+RG MI+DG+SRFSI GKPIYHF+GTSTFSEYTV H G VAKINP APLDKV
Sbjct: 113 CDLLRINTERGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKV 172

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           C++SCG+STG GAT+NVAKPKKGQSVAIFGLGAVGL AAEGAR++GASRIIGVD N  RF
Sbjct: 173 CIVSCGLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRF 232

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
           ++AK+FGVTE VNPKD+DKP+QQVIA+MT+GGVDRSVECTGSVQAMI AFECVHDGWGVA
Sbjct: 233 DQAKEFGVTECVNPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVA 292

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVP+KDDAFKTHPMN LNERTLKGTFFGNYKP++D+P VVEKYMNKELE+EKFITHT
Sbjct: 293 VLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHT 352

Query: 303 VPFSEINKAFDLMLAGESIRCIIRM 327
           VPFSEINKAFD ML GESIRCII M
Sbjct: 353 VPFSEINKAFDYMLKGESIRCIITM 377

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14219|ADH1_PENAM Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1

 Score =  583 bits (1504), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 278/326 (85%), Positives = 300/326 (92%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTP+FPRIFGHEAGGI+ESVGEGVTD+ PGDHVLPVFTGECKECPHC S ESNM
Sbjct: 53  FWEAKGQTPVFPRIFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNM 112

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINT RGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKV
Sbjct: 113 CDLLRINTVRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKV 172

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTG GA++NVAKP KG +VAIFGLGAVGLAAAEGAR++GASRIIGVDLNPSRF
Sbjct: 173 CVLSCGISTGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRF 232

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
            EAKKFG TEFVNPKD++KPVQ+V+ADMTNGGVDRSVECTG++ AMI AFECVHDGWGVA
Sbjct: 233 EEAKKFGCTEFVNPKDHNKPVQEVLADMTNGGVDRSVECTGNINAMIQAFECVHDGWGVA 292

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVP+KD  FKTHPMN LNERTLKGTFFGN+KPR+DLP+VVE YM KELEVEKFITH+
Sbjct: 293 VLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVELYMKKELEVEKFITHS 352

Query: 303 VPFSEINKAFDLMLAGESIRCIIRMD 328
           VPFSEINKAFDLM  GE IRCIIRM+
Sbjct: 353 VPFSEINKAFDLMAKGEGIRCIIRME 378

Pennisetum americanum (taxid: 4543)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P13603|ADH1_TRIRP Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1

 Score =  582 bits (1500), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 278/326 (85%), Positives = 300/326 (92%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTPLFPRIFGHEAGGIVESVGEGVT L+PGDH LPVFTGEC ECPHC SEESNM
Sbjct: 54  FWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNM 113

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           C+LLRINTDRGVMIND +SRFSIKG+P++HFVGTSTFSEYTV H GCVAKINP APLDKV
Sbjct: 114 CNLLRINTDRGVMINDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKV 173

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           C+LSCGI TG GATVNVAKPK G SVAIFGLGAVGLAAAEGAR+SGASRIIGVDL  SRF
Sbjct: 174 CILSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARMSGASRIIGVDLVSSRF 233

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
             AKKFGV EFVNPKD+DKPVQQVIA+MT+GGVDR+VECTGS+QAMISAFECVHDGWGVA
Sbjct: 234 ELAKKFGVNEFVNPKDHDKPVQQVIAEMTDGGVDRAVECTGSIQAMISAFECVHDGWGVA 293

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVP KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVE+YM  ELE+EKFITH+
Sbjct: 294 VLVGVPKKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEQYMKGELELEKFITHS 353

Query: 303 VPFSEINKAFDLMLAGESIRCIIRMD 328
           +PFSEINKAFD ML GESIRCIIRM+
Sbjct: 354 IPFSEINKAFDYMLKGESIRCIIRME 379

Trifolium repens (taxid: 3899)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
68138959	380	alcohol dehydrogenase [Citrus x paradisi	0.990	0.857	0.935	1e-178
283826825	382	alcohol dehydrogenase 2 [Mangifera indic	0.990	0.853	0.890	1e-172
224093368	380	predicted protein [Populus trichocarpa]	0.987	0.855	0.892	1e-172
224131140	380	predicted protein [Populus trichocarpa]	0.993	0.860	0.877	1e-172
224131144	380	predicted protein [Populus trichocarpa]	0.993	0.860	0.883	1e-171
283826827	379	alcohol dehydrogenase 3 [Mangifera indic	0.975	0.846	0.900	1e-171
118487636	380	unknown [Populus trichocarpa]	0.987	0.855	0.892	1e-171
224093370	380	predicted protein [Populus trichocarpa]	0.987	0.855	0.889	1e-171
1297359	379	alcohol dehydrogenase 2d [Gossypium hirs	0.975	0.846	0.897	1e-171
71793966	380	alcohol dehydrogenase [Alnus glutinosa]	0.987	0.855	0.886	1e-171

>gi|68138959|gb|AAY86033.1| alcohol dehydrogenase [Citrus x paradisi]

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 305/326 (93%), Positives = 315/326 (96%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQ PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM
Sbjct: 54  FWEAKGQNPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 113

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINP APLDKV
Sbjct: 114 CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPLAPLDKV 173

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTGFGATVNVAKP++G +VAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF
Sbjct: 174 CVLSCGISTGFGATVNVAKPEEGPTVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 233

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
           NEAKKFGVTEFVNPKDYDKPVQQVIA+MTNGGVDRSVECTGSVQAMISAFECVHDGWGVA
Sbjct: 234 NEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 293

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVP+KD  FKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYM+KELEVEKFITHT
Sbjct: 294 VLVGVPHKDAVFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHT 353

Query: 303 VPFSEINKAFDLMLAGESIRCIIRMD 328
           VPFSEINKAF+ ML GE +RCIIRM+
Sbjct: 354 VPFSEINKAFEYMLRGEGLRCIIRME 379

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|283826825|gb|ADB43614.1| alcohol dehydrogenase 2 [Mangifera indica] gi|283826831|gb|ADB43617.1| alcohol dehydrogenase 2 [Mangifera indica]

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 292/328 (89%), Positives = 311/328 (94%), Gaps = 2/328 (0%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGEC EC HCHSEESNM
Sbjct: 54  FWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECGECRHCHSEESNM 113

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGC+AKINPAAPLDKV
Sbjct: 114 CDLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCLAKINPAAPLDKV 173

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTG GAT+NVAKPKKGQ+VA+FGLGAVGLAA EGAR++GASRIIGVDLNP RF
Sbjct: 174 CVLSCGISTGLGATLNVAKPKKGQTVAVFGLGAVGLAAVEGARIAGASRIIGVDLNPVRF 233

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
            EAKKFG TEFVNPKDYDKPVQQVIADMT+GGVDRSVECTGS+QAMISAFECVHDGWGVA
Sbjct: 234 AEAKKFGCTEFVNPKDYDKPVQQVIADMTDGGVDRSVECTGSIQAMISAFECVHDGWGVA 293

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKE--LEVEKFIT 300
           VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPR+D+P VVE+YMNKE  L++EKFIT
Sbjct: 294 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRTDIPRVVEQYMNKELDLQLEKFIT 353

Query: 301 HTVPFSEINKAFDLMLAGESIRCIIRMD 328
           H++PFSEINKAFD ML G+S+RCIIRM+
Sbjct: 354 HSLPFSEINKAFDYMLKGDSLRCIIRME 381

Source: Mangifera indica

Species: Mangifera indica

Genus: Mangifera

Family: Anacardiaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093368|ref|XP_002309899.1| predicted protein [Populus trichocarpa] gi|222852802|gb|EEE90349.1| predicted protein [Populus trichocarpa]

 Score =  609 bits (1570), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 290/325 (89%), Positives = 311/325 (95%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTPLFPRIFGHEAGGIVESVGEGVTDL+PGDHVLPVFTGECKEC HC SEESNM
Sbjct: 54  FWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNM 113

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINTDRGVM+NDG+SRFSIKG+PIYHFVGTSTFSEYTV HVGCVAKINPAAPLDKV
Sbjct: 114 CDLLRINTDRGVMLNDGKSRFSIKGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKV 173

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTG GAT+NVAKPKKG SVAIFGLGAVGLAAAEGAR++GASRIIGVDLN +RF
Sbjct: 174 CVLSCGISTGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRF 233

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
           +EAKKFGVTEFVNPKD++KPVQ+VIA+MTNGGVDRSVECTGS+ AMISAFECVHDGWGVA
Sbjct: 234 DEAKKFGVTEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSINAMISAFECVHDGWGVA 293

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVPNKDD+FKTHPMN+LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELE+EKFITH 
Sbjct: 294 VLVGVPNKDDSFKTHPMNVLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHE 353

Query: 303 VPFSEINKAFDLMLAGESIRCIIRM 327
           VPFSEINKAF+ ML+G  +RCIIRM
Sbjct: 354 VPFSEINKAFEYMLSGAGLRCIIRM 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131140|ref|XP_002328464.1| predicted protein [Populus trichocarpa] gi|222838179|gb|EEE76544.1| predicted protein [Populus trichocarpa]

 Score =  608 bits (1569), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 287/327 (87%), Positives = 310/327 (94%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTPLFPRIFGHEAGGIVESVGEGVTDL+PGDHVLPVFTGECKEC HC SEESNM
Sbjct: 54  FWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNM 113

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINTDRGVM+NDG+SRFSI+G+PIYHFVGTSTFSEYTV HVGC+AKINPAAPLDKV
Sbjct: 114 CDLLRINTDRGVMLNDGKSRFSIRGQPIYHFVGTSTFSEYTVVHVGCLAKINPAAPLDKV 173

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           C+LSCG+STG GAT+NVAKPKKG SVAIFGLGAVGLAAAEGAR++GASRIIGVDLN +RF
Sbjct: 174 CILSCGVSTGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRF 233

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
           NEAKKFGVTEFVNPKDY KPVQ+VIA+MTNGGVDRSVECTGS+ AMISAFECVHDGWGVA
Sbjct: 234 NEAKKFGVTEFVNPKDYKKPVQEVIAEMTNGGVDRSVECTGSINAMISAFECVHDGWGVA 293

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVPNKDD+FKTHPM+ LNE+TLKGTFFGNYKPRSDLPSVVE YMNKELE+EKFITH 
Sbjct: 294 VLVGVPNKDDSFKTHPMSFLNEKTLKGTFFGNYKPRSDLPSVVEMYMNKELELEKFITHE 353

Query: 303 VPFSEINKAFDLMLAGESIRCIIRMDG 329
           VPFSEINKAFD ML+G S+RCIIRM+ 
Sbjct: 354 VPFSEINKAFDYMLSGASLRCIIRMEA 380

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131144|ref|XP_002328465.1| predicted protein [Populus trichocarpa] gi|222838180|gb|EEE76545.1| predicted protein [Populus trichocarpa]

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/327 (88%), Positives = 308/327 (94%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTPLFPRIFGHEAG IVESVGEGVTDL+PGDHVLPVFTGECKEC  C SEESNM
Sbjct: 54  FWEAKGQTPLFPRIFGHEAGAIVESVGEGVTDLKPGDHVLPVFTGECKECRQCKSEESNM 113

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINTDRGVM+NDG+SRFSI+G+PIYHFVGTSTFSEYTV HVGC AKINPAAPLDKV
Sbjct: 114 CDLLRINTDRGVMLNDGKSRFSIRGQPIYHFVGTSTFSEYTVVHVGCAAKINPAAPLDKV 173

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTG GAT+NVAKPKKG SVAIFGLGAVGLAAAEGAR+SGASRIIGVDLN +RF
Sbjct: 174 CVLSCGISTGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLNSNRF 233

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
            EAKKFGVTEFVNPKD+DKPV +VIA+MTNGGVDRSVECTGS+ AM+SAFECVHDGWGVA
Sbjct: 234 EEAKKFGVTEFVNPKDHDKPVHEVIAEMTNGGVDRSVECTGSISAMVSAFECVHDGWGVA 293

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVPNKDDAFKTHPMN+LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELE+EKFITH 
Sbjct: 294 VLVGVPNKDDAFKTHPMNILNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHE 353

Query: 303 VPFSEINKAFDLMLAGESIRCIIRMDG 329
           VPFSEINKAF+ ML+G S+RCIIRMD 
Sbjct: 354 VPFSEINKAFEYMLSGASLRCIIRMDA 380

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|283826827|gb|ADB43615.1| alcohol dehydrogenase 3 [Mangifera indica] gi|283826833|gb|ADB43618.1| alcohol dehydrogenase 3 [Mangifera indica]

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 291/323 (90%), Positives = 307/323 (95%), Gaps = 2/323 (0%)

Query: 8   GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR 67
           GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGEC EC HCHSEESNMCDLLR
Sbjct: 56  GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECGECRHCHSEESNMCDLLR 115

Query: 68  INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSC 127
           INTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGC+AKINPAAPLDKVCVLSC
Sbjct: 116 INTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCLAKINPAAPLDKVCVLSC 175

Query: 128 GISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK 187
           GISTG GAT+NVAKPKKGQ+VA+FGLGAVGLAA EGAR++GASRIIGVDLNP RF EAKK
Sbjct: 176 GISTGLGATLNVAKPKKGQTVAVFGLGAVGLAAVEGARIAGASRIIGVDLNPVRFAEAKK 235

Query: 188 FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
           FG TEFVNPKDYDKPVQQVIADMT+GGVDRSVECTGS+QAMISAFECVHDGWGVAVLVGV
Sbjct: 236 FGCTEFVNPKDYDKPVQQVIADMTDGGVDRSVECTGSIQAMISAFECVHDGWGVAVLVGV 295

Query: 248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKE--LEVEKFITHTVPF 305
           PNKDDAFKTHPMNLLNERTLKGTFFGNYKPR+D+P VVE+Y+NKE  LE+EKFITH+VPF
Sbjct: 296 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRTDIPRVVEQYLNKELDLELEKFITHSVPF 355

Query: 306 SEINKAFDLMLAGESIRCIIRMD 328
           SEINKAFD ML G S+R IIRM+
Sbjct: 356 SEINKAFDYMLKGHSLRTIIRME 378

Source: Mangifera indica

Species: Mangifera indica

Genus: Mangifera

Family: Anacardiaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487636|gb|ABK95643.1| unknown [Populus trichocarpa]

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 290/325 (89%), Positives = 311/325 (95%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTPLFPRIFGHEAGGIVESVGEGVTDL+PGDHVLPVFTGECKEC HC SEESNM
Sbjct: 54  FWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNM 113

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINTDRGVM+NDG+SRFSI+G+PIYHFVGTSTFSEYTV HVGCVAKINPAAPLDKV
Sbjct: 114 CDLLRINTDRGVMLNDGKSRFSIRGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKV 173

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTG GAT+NVAKPKKG SVAIFGLGAVGLAAAEGAR++GASRIIGVDLN +RF
Sbjct: 174 CVLSCGISTGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRF 233

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
           +EAKKFGVTEFVNPKD++KPVQ+VIA+MTNGGVDRSVECTGSV AMISAFECVHDGWGVA
Sbjct: 234 DEAKKFGVTEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSVNAMISAFECVHDGWGVA 293

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVPNKDD+FKTHPMN+LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELE+EKFITH 
Sbjct: 294 VLVGVPNKDDSFKTHPMNVLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHE 353

Query: 303 VPFSEINKAFDLMLAGESIRCIIRM 327
           VPFSEINKAF+ ML+G  +RCIIRM
Sbjct: 354 VPFSEINKAFEYMLSGAGLRCIIRM 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093370|ref|XP_002309900.1| predicted protein [Populus trichocarpa] gi|222852803|gb|EEE90350.1| predicted protein [Populus trichocarpa]

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/325 (88%), Positives = 311/325 (95%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTPLFPRIFGHEAGGIVESVGEGVTDL+PGDHVLPVFTGECKEC HC SEESNM
Sbjct: 54  FWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNM 113

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINTDRGVM+NDG+SRFSI+G+PIYHFVGTSTFSEYTV HVGCVAKINPAAPLDKV
Sbjct: 114 CDLLRINTDRGVMLNDGKSRFSIRGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKV 173

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTG GAT+NVAKPKKG S+AIFGLGAVGLAAAEGAR++GASRIIGVDLN +RF
Sbjct: 174 CVLSCGISTGLGATLNVAKPKKGSSIAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRF 233

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
           +EAKKFGVTEFVNPKD++KPVQ+VIA+MTNGGVDRSVECTGSV AMISAFECVHDGWGVA
Sbjct: 234 DEAKKFGVTEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSVNAMISAFECVHDGWGVA 293

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVPNKDD+FKTHPMN+LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELE+EKFITH 
Sbjct: 294 VLVGVPNKDDSFKTHPMNVLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHE 353

Query: 303 VPFSEINKAFDLMLAGESIRCIIRM 327
           VPFSEINKAF+ ML+G  +RCIIRM
Sbjct: 354 VPFSEINKAFEYMLSGAGLRCIIRM 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1297359|gb|AAA98984.1| alcohol dehydrogenase 2d [Gossypium hirsutum]

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 288/321 (89%), Positives = 308/321 (95%)

Query: 8   GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR 67
           GQ PLFPRI GHEAGGIVESVGEGVTDL+PGDHVLP+FTGECKECPHC SEESNMCDLLR
Sbjct: 58  GQNPLFPRILGHEAGGIVESVGEGVTDLKPGDHVLPIFTGECKECPHCLSEESNMCDLLR 117

Query: 68  INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSC 127
           INTDRG MINDG+SRFSI GKPIYHF+GTSTFSEYTV HVG VAKINP APLDKVCVLSC
Sbjct: 118 INTDRGEMINDGKSRFSINGKPIYHFLGTSTFSEYTVVHVGQVAKINPEAPLDKVCVLSC 177

Query: 128 GISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK 187
           G+STGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF +AKK
Sbjct: 178 GMSTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFEQAKK 237

Query: 188 FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
           FGVTEFVNPKDY+KPVQ+ I +MT GGVDRSVECTGS+QAMISAFECVHDGWGVAVLVGV
Sbjct: 238 FGVTEFVNPKDYNKPVQEAIVEMTGGGVDRSVECTGSIQAMISAFECVHDGWGVAVLVGV 297

Query: 248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSE 307
           PNKDDAFKTHP+NLLNE+T+KGTFFGNYKPRSD+P+VVEKYMNKELE++KFITHTVPFSE
Sbjct: 298 PNKDDAFKTHPVNLLNEKTVKGTFFGNYKPRSDIPAVVEKYMNKELELDKFITHTVPFSE 357

Query: 308 INKAFDLMLAGESIRCIIRMD 328
           INKAF+LMLAGE +RC+IRMD
Sbjct: 358 INKAFELMLAGEGLRCVIRMD 378

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|71793966|emb|CAJ21172.1| alcohol dehydrogenase [Alnus glutinosa]

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 288/325 (88%), Positives = 312/325 (96%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +  GQTPLFPRIFGHEAGGIVESVGEGVTDL+ GDHVLPVFTGECKEC HC SEESNM
Sbjct: 54  FWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKLGDHVLPVFTGECKECRHCKSEESNM 113

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           CDLLRINTDRGVM+NDG++RFSI GKPIYHFVGTSTFSEYTV HVGC+AKINPAAPLDKV
Sbjct: 114 CDLLRINTDRGVMLNDGKTRFSINGKPIYHFVGTSTFSEYTVIHVGCLAKINPAAPLDKV 173

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
           CVLSCGISTG GAT+NVAKPKKGQSVA+FGLGAVGLAAAEGAR++GASRIIGVDLNP+RF
Sbjct: 174 CVLSCGISTGLGATLNVAKPKKGQSVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPARF 233

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
            EAKKFGVTEFVNPKD+DKPVQ+V+A+MT+GGVDR+VECTGS+QAMISAFECVHDGWGVA
Sbjct: 234 EEAKKFGVTEFVNPKDHDKPVQEVLAEMTDGGVDRAVECTGSIQAMISAFECVHDGWGVA 293

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVGVP+KDDAFKTHPMNLLNERTLKGTFFGNYKPR+D+P VVEKYMNKELE+EKFITH+
Sbjct: 294 VLVGVPSKDDAFKTHPMNLLNERTLKGTFFGNYKPRTDIPGVVEKYMNKELELEKFITHS 353

Query: 303 VPFSEINKAFDLMLAGESIRCIIRM 327
           VPFSEINKAFDLML G+SIRCII M
Sbjct: 354 VPFSEINKAFDLMLHGKSIRCIITM 378

Source: Alnus glutinosa

Species: Alnus glutinosa

Genus: Alnus

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
TAIR|locus:2025237	379	ADH1 "alcohol dehydrogenase 1"	0.972	0.844	0.828	1.7e-146
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.972	0.839	0.507	1.5e-90
ZFIN|ZDB-GENE-011003-1	376	adh5 "alcohol dehydrogenase 5"	0.966	0.845	0.498	4.7e-87
UNIPROTKB|F1S0C1	374	ADH5 "Uncharacterized protein"	0.954	0.839	0.504	2.6e-86
RGD|2292706	374	Adh5 "alcohol dehydrogenase 5	0.954	0.839	0.511	2.6e-86
UNIPROTKB|P12711	374	Adh5 "Alcohol dehydrogenase cl	0.954	0.839	0.511	2.6e-86
UNIPROTKB|P11766	374	ADH5 "Alcohol dehydrogenase cl	0.954	0.839	0.507	1.1e-85
UNIPROTKB|F1NKS5	374	ADH5 "Uncharacterized protein"	0.951	0.836	0.496	1.8e-85
UNIPROTKB|Q3ZC42	374	ADH5 "Alcohol dehydrogenase cl	0.954	0.839	0.492	2.4e-85
TIGR_CMR|SO_A0161	376	SO_A0161 "zinc-containing alco	0.972	0.851	0.501	3e-85

TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1431 (508.8 bits), Expect = 1.7e-146, P = 1.7e-146
 Identities = 265/320 (82%), Positives = 288/320 (90%)

Query:     8 GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR 67
             GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLP+FTGEC EC HCHSEESNMCDLLR
Sbjct:    58 GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLR 117

Query:    68 INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSC 127
             INT+RG MI+DG+SRFSI GKPIYHF+GTSTFSEYTV H G VAKINP APLDKVC++SC
Sbjct:   118 INTERGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSC 177

Query:   128 GISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKK 187
             G+STG GAT+NVAKPKKGQSVAIF             R++GASRIIGVD N  RF++AK+
Sbjct:   178 GLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKE 237

Query:   188 FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
             FGVTE VNPKD+DKP+QQVIA+MT+GGVDRSVECTGSVQAMI AFECVHDGWGVAVLVGV
Sbjct:   238 FGVTECVNPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGV 297

Query:   248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSE 307
             P+KDDAFKTHPMN LNERTLKGTFFGNYKP++D+P VVEKYMNKELE+EKFITHTVPFSE
Sbjct:   298 PSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSE 357

Query:   308 INKAFDLMLAGESIRCIIRM 327
             INKAFD ML GESIRCII M
Sbjct:   358 INKAFDYMLKGESIRCIITM 377

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045333 "cellular respiration" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;RCA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS;IMP

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
 Identities = 163/321 (50%), Positives = 218/321 (67%)

Query:     7 WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLL 66
             W    L PRIFGHEA GIVES+GEGVT+ + GDHVL VFTGEC  C HC S +SNMC +L
Sbjct:    60 WESQSLLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVL 119

Query:    67 RINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLS 126
              +   +G+M +D ++RFSIKGKP+YH+   S+FSEYTV H GC  K++P APL K+C+LS
Sbjct:   120 GMER-KGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLS 178

Query:   127 CGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAK 186
             CG++ G GA  NVA  +KG SV IF             ++ GA++I+GVD+NP++  +AK
Sbjct:   179 CGVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAK 238

Query:   187 KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246
              FGVT+F+N  D  +P+ QVI  MT GG D S EC G      +A +   DGWG+ V +G
Sbjct:   239 TFGVTDFINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLG 298

Query:   247 VPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFS 306
             VP        H    L+ ++LKGT FG +KP+SDLPS+++KYMNKE+ +++FITH + F 
Sbjct:   299 VPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFD 358

Query:   307 EINKAFDLMLAGESIRCIIRM 327
             EINKAF LM  G+ +RC++ M
Sbjct:   359 EINKAFVLMREGKCLRCVLHM 379

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)]

 Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
 Identities = 160/321 (49%), Positives = 220/321 (68%)

Query:     8 GQTP--LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDL 65
             G  P  LFP I GHE  G VESVGEGVT  +PGD V+P++  +C EC  C + ++N+C  
Sbjct:    56 GSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQK 115

Query:    66 LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
             +R+   +G+M  D  SRF+ KGK ++HF+GTSTFSEYTV     +AK++  APLDKVC+L
Sbjct:   116 IRVTQGQGLM-PDNTSRFTCKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLL 174

Query:   126 SCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEA 185
              CGISTG+GA +N AK + G + A+F             + +GA+RIIG+D+NP +F  A
Sbjct:   175 GCGISTGYGAAINTAKVEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIA 234

Query:   186 KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245
             KKFG TEFVNPKD+ KP+Q+V+ ++T+GGVD S EC G+V  M +A E  H GWG +V++
Sbjct:   235 KKFGATEFVNPKDHSKPIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGTSVII 294

Query:   246 GVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPF 305
             GV        T P  L+  RT KGT FG +K    +P +V  YMNK+L V++F+THT+PF
Sbjct:   295 GVAGAGQEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVNDYMNKKLMVDEFVTHTLPF 354

Query:   306 SEINKAFDLMLAGESIRCIIR 326
             ++IN+AFDLM AG+SIR +++
Sbjct:   355 AQINEAFDLMHAGKSIRAVLQ 375

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1S0C1 ADH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 159/315 (50%), Positives = 222/315 (70%)

Query:    13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
             FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +
Sbjct:    61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120

Query:    73 GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
             G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CG+STG
Sbjct:   121 GLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTG 179

Query:   133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
             +GA VN AK + G + A+F             +V+GASRIIGVD+N  +F  AK+FG +E
Sbjct:   180 YGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGASE 239

Query:   193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
              +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +
Sbjct:   240 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 299

Query:   253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH +PF +IN+AF
Sbjct:   300 EIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAF 359

Query:   313 DLMLAGESIRCIIRM 327
             +LM AG+SIR +I++
Sbjct:   360 ELMHAGKSIRTVIKL 374

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|2292706 Adh5 "alcohol dehydrogenase 5 (class III), chi polypeptide" [Rattus norvegicus (taxid:10116)]

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 161/315 (51%), Positives = 221/315 (70%)

Query:    13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
             FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +
Sbjct:    61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120

Query:    73 GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
             G+M  DG SRF+ KGKPI HF+GTSTFSEYTV     VAKI+P+APLDKVC+L CGISTG
Sbjct:   121 GLM-PDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTG 179

Query:   133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
             +GA VN AK + G + A+F             +V+GASRIIG+D+N  +F +AK+FG TE
Sbjct:   180 YGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATE 239

Query:   193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
              +NP+D+ K +Q+V+ +MT+GGVD S EC G+V+ M SA E  H GWGV+V+VGV    +
Sbjct:   240 CINPQDFSKSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGE 299

Query:   253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+T  + F +INKAF
Sbjct:   300 EISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAF 359

Query:   313 DLMLAGESIRCIIRM 327
             DLM +G SIR +++M
Sbjct:   360 DLMHSGNSIRTVLKM 374

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA;ISO

GO:0003016 "respiratory system process" evidence=IEA;ISO

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA;ISO;IDA

GO:0005504 "fatty acid binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006068 "ethanol catabolic process" evidence=IDA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0007568 "aging" evidence=IEP

GO:0008270 "zinc ion binding" evidence=IEA;ISO

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA;ISO

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA;ISO

GO:0032496 "response to lipopolysaccharide" evidence=IEA;ISO

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0045777 "positive regulation of blood pressure" evidence=IEA;ISO

GO:0046294 "formaldehyde catabolic process" evidence=IEA;ISO

GO:0051409 "response to nitrosative stress" evidence=IEA;ISO

GO:0051775 "response to redox state" evidence=IEA;ISO

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|P12711 Adh5 "Alcohol dehydrogenase class-3" [Rattus norvegicus (taxid:10116)]

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 161/315 (51%), Positives = 221/315 (70%)

Query:    13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
             FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +
Sbjct:    61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120

Query:    73 GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
             G+M  DG SRF+ KGKPI HF+GTSTFSEYTV     VAKI+P+APLDKVC+L CGISTG
Sbjct:   121 GLM-PDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTG 179

Query:   133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
             +GA VN AK + G + A+F             +V+GASRIIG+D+N  +F +AK+FG TE
Sbjct:   180 YGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATE 239

Query:   193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
              +NP+D+ K +Q+V+ +MT+GGVD S EC G+V+ M SA E  H GWGV+V+VGV    +
Sbjct:   240 CINPQDFSKSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGE 299

Query:   253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+T  + F +INKAF
Sbjct:   300 EISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAF 359

Query:   313 DLMLAGESIRCIIRM 327
             DLM +G SIR +++M
Sbjct:   360 DLMHSGNSIRTVLKM 374

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

UNIPROTKB|P11766 ADH5 "Alcohol dehydrogenase class-3" [Homo sapiens (taxid:9606)]

 Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
 Identities = 160/315 (50%), Positives = 220/315 (69%)

Query:    13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
             FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +
Sbjct:    61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120

Query:    73 GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
             G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGISTG
Sbjct:   121 GLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 179

Query:   133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
             +GA VN AK + G   A+F             +V+GASRIIGVD+N  +F  AK+FG TE
Sbjct:   180 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 239

Query:   193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
              +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +
Sbjct:   240 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 299

Query:   253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH + F EINKAF
Sbjct:   300 EIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAF 359

Query:   313 DLMLAGESIRCIIRM 327
             +LM +G+SIR ++++
Sbjct:   360 ELMHSGKSIRTVVKI 374

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009055 "electron carrier activity" evidence=TAS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0005504 "fatty acid binding" evidence=IDA

GO:0051775 "response to redox state" evidence=IDA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IDA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=TAS

UNIPROTKB|F1NKS5 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
 Identities = 156/314 (49%), Positives = 219/314 (69%)

Query:    13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
             FP I GHE  GIVESVGEGVT ++PGD V+P++  +C EC +C + ++N+C  +R+   +
Sbjct:    61 FPVILGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRVTQGK 120

Query:    73 GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
             G+M  DG  RF+ KGK IYHF+GTSTFSEYTV     VAKI+PAAP DKVC+L CGISTG
Sbjct:   121 GLM-PDGTIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTG 179

Query:   133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
             +GA VN AK + G + A+F             + +GASRIIG+D+N + + +AK+FG  E
Sbjct:   180 YGAAVNTAKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAE 239

Query:   193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
              ++P+D++KP+Q+V+ +MT+GGVD S EC G+V  M +A E  H GWGV+V+VGV     
Sbjct:   240 CISPQDFEKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQ 299

Query:   253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                T P  L+  RT KGT FG +K    +P +V  YM K+++V++F+THT+PF +IN+AF
Sbjct:   300 EISTRPFQLVTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIKVDEFVTHTLPFDKINEAF 359

Query:   313 DLMLAGESIRCIIR 326
             DL+  G+SIR +++
Sbjct:   360 DLLHKGKSIRTVLK 373

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

UNIPROTKB|Q3ZC42 ADH5 "Alcohol dehydrogenase class-3" [Bos taurus (taxid:9913)]

 Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
 Identities = 155/315 (49%), Positives = 223/315 (70%)

Query:    13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
             +P I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +
Sbjct:    61 YPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120

Query:    73 GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
             G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGISTG
Sbjct:   121 GLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 179

Query:   133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
             +GA +N AK + G + A+F             +++GA+RIIGVD+N  +F  AK+FG +E
Sbjct:   180 YGAALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASE 239

Query:   193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
              +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWG++V+VGV    +
Sbjct:   240 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGE 299

Query:   253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH++PF +IN+AF
Sbjct:   300 EIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHSLPFDQINEAF 359

Query:   313 DLMLAGESIRCIIRM 327
             DLM AG+SIR ++++
Sbjct:   360 DLMHAGKSIRTVVKL 374

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

TIGR_CMR|SO_A0161 SO_A0161 "zinc-containing alcohol dehydrogenase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
 Identities = 162/323 (50%), Positives = 215/323 (66%)

Query:     8 GQTP--LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDL 65
             G  P  +FP I GHE GGIVES+GEGVT +Q GDHV+P++T EC EC  C S ++N+C  
Sbjct:    54 GDDPEGIFPCILGHEGGGIVESIGEGVTSVQVGDHVIPLYTPECGECKFCKSGKTNLCQK 113

Query:    66 LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
             +R    +G+M  DG SRFS  G+ IYH++GTSTFSEYTV     +AK+NP APL++VC+L
Sbjct:   114 IRETQGKGLM-PDGTSRFSKDGQIIYHYMGTSTFSEYTVLPEISLAKVNPDAPLEEVCLL 172

Query:   126 SCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEA 185
              CG++TG GA +N AK ++G +VAIF              ++ ASRII +D+N S+F  A
Sbjct:   173 GCGVTTGMGAVMNTAKVEEGATVAIFGMGGIGLSAVIGATMAKASRIIVIDINESKFELA 232

Query:   186 KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245
              K G T+F+NPKDYDKP+Q VI ++T+GGVD S EC G+V  M SA EC H GWG +V++
Sbjct:   233 GKLGATDFINPKDYDKPIQDVIVELTDGGVDYSFECIGNVNVMRSALECCHKGWGESVVI 292

Query:   246 GVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPF 305
             GV        T P  L+  R  KG+ FG  K RS+LP  VE+Y+  E ++  FITHT+  
Sbjct:   293 GVAGAGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPEYVERYLAGEFKLSDFITHTMSL 352

Query:   306 SEINKAFDLMLAGESIRCIIRMD 328
              ++N AFDLM  G+SIR +I  D
Sbjct:   353 EQVNDAFDLMHQGKSIRTVIHFD 375

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2R8Z5	ADH1_ORYSJ	1, ., 1, ., 1, ., 1	0.8558	0.9908	0.8601	yes	no
P80467	ADHX_UROHA	1, ., 1, ., 1, ., 2, 8, 4	0.5238	0.9544	0.8418	N/A	no
O19053	ADHX_RABIT	1, ., 1, ., 1, ., 2, 8, 4	0.5174	0.9544	0.8395	yes	no
P73138	FRMA_SYNY3	1, ., 1, ., 1, ., -	0.5079	0.9544	0.8509	N/A	no
P06525	ADH1_ARATH	1, ., 1, ., 1, ., 1	0.8553	0.9878	0.8575	yes	no
P19854	ADHX_HORSE	1, ., 1, ., 1, ., 2, 8, 4	0.5269	0.9544	0.8395	yes	no
P14674	ADH2_SOLTU	1, ., 1, ., 1, ., 1	0.8558	0.9908	0.8578	N/A	no
P14675	ADH3_SOLTU	1, ., 1, ., 1, ., 1	0.8558	0.9908	0.8578	N/A	no
A2XAZ3	ADHX_ORYSI	1, ., 1, ., 1, ., 2, 8, 4	0.5993	0.9635	0.8320	N/A	no
P14673	ADH1_SOLTU	1, ., 1, ., 1, ., 1	0.8588	0.9908	0.8578	N/A	no
P12711	ADHX_RAT	1, ., 1, ., 1, ., 2, 8, 4	0.5365	0.9544	0.8395	yes	no
P86884	ADHX_SCYCA	1, ., 1, ., 1, ., 2, 8, 4	0.5318	0.9513	0.8324	N/A	no
P81601	ADHL_GADMO	1, ., 1, ., 1, ., 2, 8, 4	0.5063	0.9513	0.8346	N/A	no
P28032	ADH2_SOLLC	1, ., 1, ., 1, ., 1	0.8430	0.9878	0.8552	N/A	no
P93629	ADHX_MAIZE	1, ., 1, ., 1, ., 2, 8, 4	0.5727	0.9604	0.8293	N/A	no
P48977	ADH_MALDO	1, ., 1, ., 1, ., 1	0.8343	0.9908	0.8578	N/A	no
P00333	ADH1_MAIZE	1, ., 1, ., 1, ., 1	0.8404	0.9908	0.8601	N/A	no
P00327	ADH1E_HORSE	1, ., 1, ., 1, ., 1	0.5031	0.9544	0.8373	yes	no
P80572	ADHX_PEA	1, ., 1, ., 1, ., 2, 8, 4	0.5822	0.9604	0.8359	N/A	no
Q4R1E8	ADH2_ORYSI	1, ., 1, ., 1, ., 1	0.8251	0.9908	0.8601	N/A	no
Q3ZC42	ADHX_BOVIN	1, ., 1, ., 1, ., 2, 8, 4	0.5174	0.9544	0.8395	yes	no
P46415	ADHX_DROME	1, ., 1, ., 1, ., 2, 8, 4	0.5078	0.9544	0.8284	yes	no
P11766	ADHX_HUMAN	1, ., 1, ., 1, ., 2, 8, 4	0.5333	0.9544	0.8395	yes	no
P25141	ADH1_PETHY	1, ., 1, ., 1, ., 1	0.8685	0.9908	0.8534	N/A	no
P05336	ADH1_HORVU	1, ., 1, ., 1, ., 1	0.8527	0.9908	0.8601	N/A	no
P79896	ADHX_SPAAU	1, ., 1, ., 1, ., 2, 8, 4	0.5318	0.9513	0.8324	N/A	no
P81600	ADHH_GADMO	1, ., 1, ., 1, ., 2, 8, 4	0.5303	0.9483	0.832	N/A	no
P12886	ADH1_PEA	1, ., 1, ., 1, ., 1	0.8558	0.9908	0.8578	N/A	no
P13603	ADH1_TRIRP	1, ., 1, ., 1, ., 1	0.8527	0.9908	0.8578	N/A	no
P17648	ADH_FRAAN	1, ., 1, ., 1, ., 1	0.8343	0.9908	0.8578	N/A	no
P04707	ADH2_MAIZE	1, ., 1, ., 1, ., 1	0.8159	0.9908	0.8601	N/A	no
P14219	ADH1_PENAM	1, ., 1, ., 1, ., 1	0.8527	0.9908	0.8601	N/A	no
P28474	ADHX_MOUSE	1, ., 1, ., 1, ., 2, 8, 4	0.5206	0.9544	0.8395	yes	no
Q54TC2	ADHX_DICDI	1, ., 1, ., 1, ., 2, 8, 4	0.5109	0.9574	0.8311	yes	no
P81431	ADHX_OCTVU	1, ., 1, ., 1, ., 2, 8, 4	0.5063	0.9574	0.8333	N/A	no
P00328	ADH1S_HORSE	1, ., 1, ., 1, ., 1	0.4952	0.9452	0.8315	yes	no
Q0ITW7	ADH2_ORYSJ	1, ., 1, ., 1, ., 1	0.8251	0.9908	0.8601	no	no
Q75ZX4	ADH1_ORYSI	1, ., 1, ., 1, ., 1	0.8558	0.9908	0.8601	N/A	no
P10847	ADH2_HORVU	1, ., 1, ., 1, ., 1	0.7805	0.9513	0.8391	N/A	no
Q07264	ADH1_ZEALU	1, ., 1, ., 1, ., 1	0.8561	0.8875	0.9965	N/A	no
P10848	ADH3_HORVU	1, ., 1, ., 1, ., 1	0.7944	0.9908	0.8601	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.983
4th Layer	1.1.1.1	0.979

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	329
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	0.0
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-176
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-168
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-151
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-150
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-144
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-141
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-137
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-135
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-102
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	8e-86
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	2e-83
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	2e-77
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	2e-58
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-53
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	3e-50
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-49
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	3e-45
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	9e-45
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	7e-43
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	1e-42
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	2e-42
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	4e-41
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	4e-41
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	6e-41
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	8e-41
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	4e-39
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	4e-39
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	2e-38
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	4e-38
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-37
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	3e-36
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	8e-36
cd05281	341	cd05281, TDH, Threonine dehydrogenase	2e-34
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	3e-31
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	2e-28
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	6e-27
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	2e-26
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	2e-26
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	2e-25
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	2e-25
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	2e-23
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	2e-23
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	4e-23
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	1e-22
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-22
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	1e-22
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	3e-22
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	4e-20
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	7e-19
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	7e-19
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	2e-18
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	3e-18
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-17
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	3e-17
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	3e-17
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	3e-16
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	5e-16
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	7e-16
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	9e-16
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	3e-15
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	2e-14
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-12
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	3e-12
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	2e-11
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	3e-10
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	3e-10
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	7e-10
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	3e-09
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	8e-09
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-08
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	4e-08
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	1e-07
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	1e-07
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	3e-07
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	4e-07
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	4e-07
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	5e-07
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	8e-07
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	1e-06
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	2e-06
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	3e-06
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-05
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	2e-05
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	4e-05
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	1e-04
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	1e-04
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	1e-04
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-04
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	4e-04
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	4e-04
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	5e-04
PRK01390	460	PRK01390, murD, UDP-N-acetylmuramoyl-L-alanyl-D-gl	7e-04
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	0.003
cd01076	227	cd01076, NAD_bind_1_Glu_DH, NAD(P) binding domain	0.003
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	0.003
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	0.004

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  652 bits (1685), Expect = 0.0
 Identities = 263/319 (82%), Positives = 288/319 (90%)

Query: 8   GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR 67
           GQTPLFPRI GHEA GIVESVGEGVTDL+PGDHVLPVFTGECKEC HC SE+SNMCDLLR
Sbjct: 51  GQTPLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLR 110

Query: 68  INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSC 127
           INTDRGVMINDG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVC+LSC
Sbjct: 111 INTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSC 170

Query: 128 GISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK 187
           G+STG GA  NVAK KKG +VAIFGLGAVGLA AEGAR+ GASRIIGVDLNPS+F +AKK
Sbjct: 171 GVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKK 230

Query: 188 FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
           FGVTEFVNPKD+DKPVQ+VIA+MT GGVD S ECTG++ AMISAFECVHDGWGV VL+GV
Sbjct: 231 FGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGV 290

Query: 248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSE 307
           P+KD  F THPMNLLN RTLKGT FG YKP++DLP++VEKYM KELE+EKFITH +PFSE
Sbjct: 291 PHKDAVFSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSE 350

Query: 308 INKAFDLMLAGESIRCIIR 326
           INKAFDL+L GE +RCI+ 
Sbjct: 351 INKAFDLLLKGECLRCILH 369

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  491 bits (1266), Expect = e-176
 Identities = 180/316 (56%), Positives = 230/316 (72%), Gaps = 3/316 (0%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINT 70
            LFP I GHE  GIVESVGEGVT+L+PGD V+P+F G+C EC +C S ++N+C   R N 
Sbjct: 53  TLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN- 111

Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
               ++ DG SRF+ KGK IYHF+GTSTFS+YTV     VAKI+PAAPL+ VC+L CG S
Sbjct: 112 -ESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFS 170

Query: 131 TGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV 190
           TG+GA  N AK + G +VA+FGLGAVGL+A  GA+++GASRIIGVD+N  +F +AK+FG 
Sbjct: 171 TGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGA 230

Query: 191 TEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250
           T+F+NPKD DKPV +VI +MT GGVD S ECTG+   M  A E    GWGV+V+VGVP  
Sbjct: 231 TDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG 290

Query: 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINK 310
            +     P  L+  RT KG+FFG +K RSD+P +V KYMNK+ ++++ ITH +PF EINK
Sbjct: 291 AE-LSIRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINK 349

Query: 311 AFDLMLAGESIRCIIR 326
            FDLM +GE IR +I 
Sbjct: 350 GFDLMKSGECIRTVIT 365

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  470 bits (1213), Expect = e-168
 Identities = 182/315 (57%), Positives = 236/315 (74%), Gaps = 1/315 (0%)

Query: 12  LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTD 71
           LFP I GHE  GIVESVGEGVT ++PGDHV+P++T EC EC  C S ++N+C  +R    
Sbjct: 55  LFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQG 114

Query: 72  RGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 131
           +G+M  DG SRFS KGKPIYHF+GTSTFSEYTV     VAKINP APLDKVC+L CG++T
Sbjct: 115 KGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTT 173

Query: 132 GFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT 191
           G+GA +N AK + G +VA+FGLGAVGLA  +GA+ +GASRIIG+D+NP +F  AKKFG T
Sbjct: 174 GYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGAT 233

Query: 192 EFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251
           + VNPKD+DKP+QQV+ +MT+GGVD + EC G+V+ M +A E  H GWG +V++GV    
Sbjct: 234 DCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG 293

Query: 252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA 311
               T P  L+  R  KGT FG +K RS +P +VE YM  +++V++FITHT+P  EIN+A
Sbjct: 294 QEISTRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEA 353

Query: 312 FDLMLAGESIRCIIR 326
           FDLM AG+SIR +++
Sbjct: 354 FDLMHAGKSIRTVVK 368

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  428 bits (1103), Expect = e-151
 Identities = 167/317 (52%), Positives = 232/317 (73%), Gaps = 2/317 (0%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           +PRI GHEA GIVESVGEGV DL+ GDHV+P+F GEC +C +C  +++N+C+  R++  +
Sbjct: 65  YPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFK 124

Query: 73  GVMINDGQSRFSIK--GKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
            VM+NDG++RFS K  G+PIYHF+ TSTF+EYTV    CV KI+P APL K+ +LSCG+S
Sbjct: 125 SVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVS 184

Query: 131 TGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV 190
           TG GA  N A  + G SVAIFGLGAVGLA AEGAR  GAS+IIGVD+NP +F + K+ G+
Sbjct: 185 TGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI 244

Query: 191 TEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250
           T+F+NPKD DKPV + I +MT GGVD S EC G+V+ +  AF   HDGWG+ VL+G+   
Sbjct: 245 TDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPT 304

Query: 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINK 310
                 HPM L + R++ G+ FG++K +S LP++ ++ M   + ++ FITH +PF +IN+
Sbjct: 305 PKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINE 364

Query: 311 AFDLMLAGESIRCIIRM 327
           AF L+  G+++RC++ +
Sbjct: 365 AFQLLEDGKALRCLLHL 381

Length = 381

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  426 bits (1097), Expect = e-150
 Identities = 181/321 (56%), Positives = 231/321 (71%), Gaps = 1/321 (0%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLL 66
           W    LFPRIFGHEA GIVES+GEGVT+ + GDHVL VFTGEC  C HC S +SNMC +L
Sbjct: 57  WESQALFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVL 116

Query: 67  RINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLS 126
            +   +GVM +D ++RFSIKGKP+YH+   S+FSEYTV H GC  K++P APL K+C+LS
Sbjct: 117 GLER-KGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLS 175

Query: 127 CGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK 186
           CG++ G GA  NVA   KG SV IFGLG VGL+ A+GA++ GAS+IIGVD+NP +  +AK
Sbjct: 176 CGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK 235

Query: 187 KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246
            FGVT+F+NP D  +P+QQVI  MT GG D S EC G      +A +   DGWG+ V +G
Sbjct: 236 TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLG 295

Query: 247 VPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFS 306
           VP        H    L+ RTLKG+ FG +KP+SDLPS+V+KYMNKE+ +++FITH + F 
Sbjct: 296 VPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFD 355

Query: 307 EINKAFDLMLAGESIRCIIRM 327
           EINKAF+LM  G+ +RC+I M
Sbjct: 356 EINKAFELMREGKCLRCVIHM 376

Length = 378

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  411 bits (1059), Expect = e-144
 Identities = 162/315 (51%), Positives = 219/315 (69%), Gaps = 1/315 (0%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINT 70
             FP I GHEA GIVESVGEGVT ++PGD V+P+F  +C +C  C + ESN+C    +  
Sbjct: 58  TPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGK 117

Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
            +G+M  DG SRF+ KGKPI+HF+GTSTFSEYTV     VAKI+ AAPL+KVC++ CG S
Sbjct: 118 PQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFS 176

Query: 131 TGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV 190
           TG+GA VN AK   G + A+FGLG VGL+A  G + +GASRII VD+N  +F +AK+ G 
Sbjct: 177 TGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGA 236

Query: 191 TEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250
           TE +NP+DY KP+Q+V+ +MT+GGVD S E  G +  M +A    H+G+GV+V+VGVP  
Sbjct: 237 TECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPS 296

Query: 251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINK 310
                 +PM LL  RT KG  FG +K +  +P +V  YM K+  ++  ITHT+PF +IN+
Sbjct: 297 SQNLSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINE 356

Query: 311 AFDLMLAGESIRCII 325
            FDL+ +G+SIR ++
Sbjct: 357 GFDLLRSGKSIRTVL 371

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  404 bits (1039), Expect = e-141
 Identities = 164/316 (51%), Positives = 228/316 (72%), Gaps = 1/316 (0%)

Query: 12  LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTD 71
           +FP I GHE  GIVE+VGEGVT ++ GDHV+P++T EC EC  C S ++N+C  +R    
Sbjct: 54  VFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQG 113

Query: 72  RGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 131
           +G+M  DG SRFS  G+PIYH++G STFSEYTV     +AKINPAAPL++VC+L CG++T
Sbjct: 114 KGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTT 172

Query: 132 GFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT 191
           G GA +N AK ++G +VA+FGLG +GL+  +GAR++ ASRII +D+NP++F  AKK G T
Sbjct: 173 GIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGAT 232

Query: 192 EFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251
           + VNP DYDKP+Q+VI ++T+GGVD S EC G+V  M +A EC H GWG ++++GV    
Sbjct: 233 DCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG 292

Query: 252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA 311
               T P  L+  R  +G+ FG  K R++LP +VE+YM  E+ ++ F+THT+P  +IN+A
Sbjct: 293 QEISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEA 352

Query: 312 FDLMLAGESIRCIIRM 327
           FDLM  G+SIR +I  
Sbjct: 353 FDLMHEGKSIRTVIHY 368

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  393 bits (1013), Expect = e-137
 Identities = 155/315 (49%), Positives = 213/315 (67%), Gaps = 3/315 (0%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP + GHE  GIVE+VGEGVT ++PGDHV+ +FT EC +C  C S + N+C+ +R    +
Sbjct: 55  FPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGK 114

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           G M  DG +R S  G P+YH++G STF+EYTV H   + KI+P APL+K C+L CG++TG
Sbjct: 115 GTMP-DGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTG 173

Query: 133 FGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE 192
            GA VN AK + G +VA+FGLG VGLAA +GA+ +GA RII VD+NP +   AKKFG T 
Sbjct: 174 IGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATH 233

Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
           FVNPK+ D  V + I ++T+GG D + EC G+V+ M  A E  H   G +V++GV     
Sbjct: 234 FVNPKEVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQ 291

Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
              T P  L+  R  KG+ FG  +PRSD+P +V+ YM  +L +++ +THT+P  +IN+AF
Sbjct: 292 EISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAF 351

Query: 313 DLMLAGESIRCIIRM 327
           DLM  G+SIR +IR 
Sbjct: 352 DLMHEGKSIRSVIRF 366

Length = 366

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  387 bits (997), Expect = e-135
 Identities = 154/315 (48%), Positives = 207/315 (65%), Gaps = 1/315 (0%)

Query: 12  LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTD 71
             P I GHE  GIVES+G GVT L+PGD V+P+F  +C +C  C +   N+C   R    
Sbjct: 52  PLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNG 111

Query: 72  RGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 131
           RG+M  DG SRF+ KGKPI+HF+GTSTF+EYTV     +AKI+P APL+KVC++ CG ST
Sbjct: 112 RGLMS-DGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFST 170

Query: 132 GFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT 191
           G+GA VN AK   G + A+FGLG VGL+   G + +GASRII VD+N  +F +AK+ G T
Sbjct: 171 GYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGAT 230

Query: 192 EFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251
           E +NP+D DKP+ +V+ +MT+GGVD + E  GS   +  A +    G G +V+VGVP   
Sbjct: 231 ECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSG 290

Query: 252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA 311
                 P +LL  RT+KGT FG +K +  +P +V  Y  K+  +++ ITH +PF EIN  
Sbjct: 291 TEATLDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDG 350

Query: 312 FDLMLAGESIRCIIR 326
           FDLM +GESIR I+ 
Sbjct: 351 FDLMRSGESIRTILT 365

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  303 bits (779), Expect = e-102
 Identities = 122/316 (38%), Positives = 179/316 (56%), Gaps = 7/316 (2%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
            P + GHE  G+VE VG GVT ++PGDHV+  +   C  C +C   + N+CD        
Sbjct: 53  LPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCD--LGAGIL 110

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           G  + DG  RF+  G+P+    G  TF+EYTV     V KI+   PLD+  +L CG++TG
Sbjct: 111 GGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTG 170

Query: 133 FGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE 192
            GA VN A+ + G +VA+ G G VGL A +GAR++GASRII VD  P +   A++FG T 
Sbjct: 171 VGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATH 230

Query: 193 FVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251
            VN  + D  V+ V  D+T+G G D + E  G    +  A      G G AV+VG+    
Sbjct: 231 TVNASEDD-AVEAV-RDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPG 287

Query: 252 DAFKTHPMNL-LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINK 310
           +      + L L+E+ L+G+ +G+  PR D+P +++ Y    L++++ +T      EIN+
Sbjct: 288 ETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINE 347

Query: 311 AFDLMLAGESIRCIIR 326
           AF  MLAGE+ R +I 
Sbjct: 348 AFADMLAGENARGVIV 363

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  262 bits (672), Expect = 8e-86
 Identities = 116/318 (36%), Positives = 174/318 (54%), Gaps = 11/318 (3%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCD-LLRINTD 71
            P + GHE  G+VE+VG  VT L+PGDHV+  F   C EC +C S     C+    +N  
Sbjct: 55  LPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNF- 112

Query: 72  RGVMINDGQSRFSI-KGKPIY-HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
            G    DG +  S+  G P++ HF G S+F+ Y V H   V K++   PL+ +  L CGI
Sbjct: 113 SGRRP-DGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGI 171

Query: 130 STGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189
            TG GA +NV KP+ G S+A+FG GAVGLAA   A+++G + II VD+  SR   AK+ G
Sbjct: 172 QTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELG 231

Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            T  +NPK+ D  +   I ++T GGVD +++ TG    +  A + +    G   LVG P 
Sbjct: 232 ATHVINPKEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPP 288

Query: 250 KDDAFKTHPMNLLNE-RTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEI 308
                     +LL   +T++G   G+  P+  +P ++E Y   +   +K +T   PF +I
Sbjct: 289 PGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVT-FYPFEDI 347

Query: 309 NKAFDLMLAGESIRCIIR 326
           N+A     +G+ I+ ++R
Sbjct: 348 NQAIADSESGKVIKPVLR 365

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  256 bits (656), Expect = 2e-83
 Identities = 126/314 (40%), Positives = 179/314 (57%), Gaps = 5/314 (1%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
           P   GHEA G+V  VGEGVTDL+ GDHV+ VF   C  C  C      +C+        G
Sbjct: 62  PMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAG 121

Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGF 133
            ++  G  R  ++G  I H +G S F+EY V     V KI+   PL+   +  C + TG 
Sbjct: 122 TLL-SGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGV 180

Query: 134 GATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF 193
           GA VN A  + GQSVA+ GLG VGL+A  GA  +GAS+++ VDLN  +   A++ G T  
Sbjct: 181 GAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATAT 240

Query: 194 VNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDA 253
           VN  D    V+QV  ++T GGVD + E  GSV A+ +A+E    G G  V  G+P+ +  
Sbjct: 241 VNAGD-PNAVEQV-RELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEAR 297

Query: 254 FKTHPMNLL-NERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                ++L+  ERTLKG++ G+  PR D+P  +  Y++  L V+K +TH +P  EIN+ F
Sbjct: 298 LSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGF 357

Query: 313 DLMLAGESIRCIIR 326
           D + AGE++R +I 
Sbjct: 358 DRLAAGEAVRQVIL 371

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  240 bits (615), Expect = 2e-77
 Identities = 119/322 (36%), Positives = 180/322 (55%), Gaps = 12/322 (3%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDL-LRIN 69
           P +P + GHE  G+V  VG GVT ++PGDHV+  F   C  C  C +   N+CDL   + 
Sbjct: 53  PRYPILGGHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALL 112

Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
           T  G  I+DG  RF   G+ +       TFSEYTV     V KI+   PLDK C++ CG+
Sbjct: 113 T--GSQISDGTYRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGV 170

Query: 130 STGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189
            TG+G+ VN+A  + G +V + G+G VG+ A +GA V+GA ++I VD    +  +A KFG
Sbjct: 171 PTGWGSAVNIADVRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFG 230

Query: 190 VTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQ-AMIS-AFECVHDGWGVAVLVG 246
            T        ++ V Q++ ++TNG G D+++   G V    I+ A      G G  V+ G
Sbjct: 231 ATHAFA--SMEEAV-QLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTG 286

Query: 247 V-PNKDDAFKTHPMNL-LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVP 304
           + P  D   K +   L L ++ L+GT FG   PR+D+P ++E Y   +L++++ IT T  
Sbjct: 287 LGPMADVDVKVNLFELTLLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRTYT 346

Query: 305 FSEINKAFDLMLAGESIRCIIR 326
             +IN+ +  ML G++IR +I 
Sbjct: 347 LDQINEGYQDMLDGKNIRGVIV 368

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  191 bits (487), Expect = 2e-58
 Identities = 109/315 (34%), Positives = 166/315 (52%), Gaps = 14/315 (4%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP + GHEA G+VE+VGEGVTD+ PGD+V+  +   C +C  C       C     N  +
Sbjct: 54  FPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTH-NATQ 112

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
            + + DG          +   +G   F+E T+ H G   K++PAA      +L CG+  G
Sbjct: 113 KMTLTDGT--------ELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAG 164

Query: 133 FGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE 192
            GA VN    K+G SVA+ G G VG AA  GA ++GAS+II VD++  +   A++FG T 
Sbjct: 165 LGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATH 224

Query: 193 FVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251
            VN    D PV+ + A +T G G D  ++  G  +    AF    D  G  VLVGVP  D
Sbjct: 225 TVNSSGTD-PVEAIRA-LTGGFGADVVIDAVGRPETYKQAFY-ARDLAGTVVLVGVPTPD 281

Query: 252 DAFKTHPMNLLNE-RTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINK 310
              +   +++      LK +++G+  P  D P +V+ Y+   L ++ F+T  +   ++ +
Sbjct: 282 MTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEE 341

Query: 311 AFDLMLAGESIRCII 325
           AFD M AG+ +R ++
Sbjct: 342 AFDKMHAGDVLRSVV 356

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  178 bits (454), Expect = 2e-53
 Identities = 100/328 (30%), Positives = 153/328 (46%), Gaps = 16/328 (4%)

Query: 8   GQTPLFPR--IFGHEAGGIVESVGEGVTD---LQPGDHVLPVFTGECKECPHCHSEESNM 62
           G+ P FP   + GHE  G V  VG  V +   L  GD V+  F   C +C +C   + N+
Sbjct: 47  GELP-FPPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENL 105

Query: 63  CDLLRINTDRGVMINDGQSR-FSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDK 121
           C+           + DG +R F + G P+Y +      +EY V     +A +  +    +
Sbjct: 106 CEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSM-GGLAEYAVVPATALAPLPESLDYTE 164

Query: 122 VCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSR 181
             VL C   T +GA  + A  + G++VA+ G+G VG +A + A+  GAS II VD+   +
Sbjct: 165 SAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEK 224

Query: 182 FNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGV 241
             +AK+ G T  VN    D  V  +       GVD  VE  G  +    A + V DG G 
Sbjct: 225 LAKAKELGATHTVNAAKED-AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GR 282

Query: 242 AVLVGVPNKDDAFKTHPMNLL--NERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFI 299
           AV+VG+     A    P+  L      + G++    +PR DLP +V    + +L+ E  +
Sbjct: 283 AVVVGLAPG-GATAEIPITRLVRRGIKIIGSY--GARPRQDLPELVGLAASGKLDPEALV 339

Query: 300 THTVPFSEINKAFDLMLAGE-SIRCIIR 326
           TH     EIN+A++ +  G    R I+ 
Sbjct: 340 THKYKLEEINEAYENLRKGLIHGRAIVE 367

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  170 bits (432), Expect = 3e-50
 Identities = 76/307 (24%), Positives = 126/307 (41%), Gaps = 21/307 (6%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
             I GHE  G V  VG  V   + GD V+      C  C +C + E N+C+        G
Sbjct: 56  DIILGHEFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAG 114

Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGF 133
           +                    G   F+EY            P    ++   L+  ++T +
Sbjct: 115 LGG---------------GIDGG--FAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAY 157

Query: 134 GATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF 193
                 A  + G +V + G G +GL A   A++ GAS +I VD +P R   AK+ G  + 
Sbjct: 158 HGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADV 217

Query: 194 VNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDA 253
           V     D    +++      G D  +E  GS  A+  A E +  G G  V+VGV   +D 
Sbjct: 218 VVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI 276

Query: 254 FKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFD 313
                + +  E TL+G+   + +   D    ++   + +++ EK ITH +P  +  +A++
Sbjct: 277 PLPAGLVVSKELTLRGSLRPSGRE--DFERALDLLASGKIDPEKLITHRLPLDDAAEAYE 334

Query: 314 LMLAGES 320
           L    + 
Sbjct: 335 LFADRKE 341

Length = 350

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  165 bits (421), Expect = 2e-49
 Identities = 66/281 (23%), Positives = 106/281 (37%), Gaps = 33/281 (11%)

Query: 6   RWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDL 65
            +   P  P I GHE  G+V  VG GVT ++ GD V+ +    C  C  C          
Sbjct: 22  GYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGG-- 79

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
                                   I        F+EY V     +  +     L++  +L
Sbjct: 80  ------------------------ILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALL 115

Query: 126 SCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA 185
              ++T + A       K G +V + G G VGL AA+ A+ +GA R+I  D +  +   A
Sbjct: 116 PEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELA 174

Query: 186 KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245
           K+ G    ++ K+ D   +  +     GG D  ++  G  + +  A   +  G G  V+V
Sbjct: 175 KELGADHVIDYKEEDLEEE--LRLTGGGGADVVIDAVGGPETLAQALRLLRPG-GRIVVV 231

Query: 246 GVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVE 286
           G  +           L  E T+ G+  G    R D    ++
Sbjct: 232 GGTSGGPPLDDLRRLLFKELTIIGSTGG---TREDFEEALD 269

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  156 bits (398), Expect = 3e-45
 Identities = 85/304 (27%), Positives = 135/304 (44%), Gaps = 34/304 (11%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
            P   GHE  G+V  VG GVT  + GD V+   T +C  C  C     N+CD   +    
Sbjct: 64  APVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCD--SLGF-I 120

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           G+    G                   F+EY V     V K+    PL+    L   ++  
Sbjct: 121 GLGGGGG------------------GFAEYVVVPAYHVHKLPDNVPLE-EAALVEPLAVA 161

Query: 133 FGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           + A V  +  K G +  + G G +GL      + +GAS+II  + + +R   A++ G T 
Sbjct: 162 WHA-VRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATI 220

Query: 193 FVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251
            ++P + D  V   +  +T G GVD S +C G    + +A + +    G AV V +  K 
Sbjct: 221 VLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKP 277

Query: 252 DAFKTHPMNL-LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEI-N 309
            +F  +P +L L E+TL G+    Y  R D   V++   + +++ E  IT  +P  +I  
Sbjct: 278 ISF--NPNDLVLKEKTLTGSI--CY-TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVE 332

Query: 310 KAFD 313
           K F+
Sbjct: 333 KGFE 336

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  155 bits (395), Expect = 9e-45
 Identities = 99/329 (30%), Positives = 134/329 (40%), Gaps = 35/329 (10%)

Query: 7   WGQTPL--FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCD 64
            G  P      I GHE  G V  VG  V  L+PGD V       C  C  C       C+
Sbjct: 46  RGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCE 105

Query: 65  LLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHV----GCVAKINPAAPLD 120
                   G  I+ GQ+                   EY    V      +AKI    P +
Sbjct: 106 NGLWGWKLGNRIDGGQA-------------------EYV--RVPYADMNLAKIPDGLPDE 144

Query: 121 KVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS 180
              +LS  + TGF      A  K G +VA+ G G VGL A  GAR+ GA+RII VD NP 
Sbjct: 145 DALMLSDILPTGFHGAEL-AGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPE 203

Query: 181 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWG 240
           R + AK+ G T+ +NPK+    V+Q++      GVD  +E  G  +    A + V  G G
Sbjct: 204 RLDLAKEAGATDIINPKN-GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-G 261

Query: 241 VAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFIT 300
               VGV  K D             T K         R+ +P +++     +++  K IT
Sbjct: 262 TIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV---RARMPELLDLIEEGKIDPSKLIT 318

Query: 301 HTVPFSEINKAFDLMLAGES--IRCIIRM 327
           H  P  +I KA+ L        I+ +IR 
Sbjct: 319 HRFPLDDILKAYRLFDNKPDGCIKVVIRP 347

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  150 bits (382), Expect = 7e-43
 Identities = 94/327 (28%), Positives = 138/327 (42%), Gaps = 53/327 (16%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDR 72
           PRI GHE  G +  VG+GVT  + GD V  V     C EC +C     NMC   +     
Sbjct: 54  PRILGHEIAGEIVEVGDGVTGFKVGDRVF-VAPHVPCGECHYCLRGNENMCPNYKKFG-- 110

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTV-----THVGCVAKINPA------APLDK 121
                               + G   F+EY          G V K+ P       A L  
Sbjct: 111 ------------------NLYDGG--FAEYVRVPAWAVKRGGVLKL-PDNVSFEEAAL-- 147

Query: 122 VCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSR 181
           V  L+C I          A  K G +V + G G +GL  A  A+ SGA ++I  DLN  R
Sbjct: 148 VEPLACCI-----NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFR 202

Query: 182 FNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWG 240
              AKK G    ++  + D  + + + ++T+G G D  +  TGS +A   A E V  G G
Sbjct: 203 LEFAKKLGADYTIDAAEED--LVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-G 259

Query: 241 VAVLVGVPNKDDAFKTHPMNLL--NERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKF 298
             +  G   K         NL+   E T+ G++        D    +E   + +++V+  
Sbjct: 260 RILFFGGLPKGSTVNI-DPNLIHYREITITGSY---AASPEDYKEALELIASGKIDVKDL 315

Query: 299 ITHTVPFSEINKAFDLMLAGESIRCII 325
           ITH  P  +I +AF+L   G+S++ +I
Sbjct: 316 ITHRFPLEDIEEAFELAADGKSLKIVI 342

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  150 bits (380), Expect = 1e-42
 Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 35/313 (11%)

Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVM 75
           I GHE  G+V +VG GVT  + GD V+      C  C +C      +C            
Sbjct: 57  IPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCT----------- 105

Query: 76  INDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGA 135
                       +  Y +      +EY +     +  +          +L CGI T + A
Sbjct: 106 ----------SKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHA 155

Query: 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVN 195
            +         +V + G G VGL A   AR  GA  +IGVD +P R   AK  G    +N
Sbjct: 156 -LRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVIN 214

Query: 196 PKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAF 254
               D    Q I ++T+G G D ++EC+G+  A   A E V   WG  VLVG   +    
Sbjct: 215 SGQDD---VQEIRELTSGAGADVAIECSGNTAARRLALEAVRP-WGRLVLVGEGGE---L 267

Query: 255 KTHPMNLL--NERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                N L   +RTL G+++ +     +    + ++   +LEV++ +TH     +  +A+
Sbjct: 268 TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARH---KLEVDRLVTHRFGLDQAPEAY 324

Query: 313 DLMLAGESIRCII 325
            L   GES + + 
Sbjct: 325 ALFAQGESGKVVF 337

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  149 bits (379), Expect = 2e-42
 Identities = 86/324 (26%), Positives = 136/324 (41%), Gaps = 57/324 (17%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHV-----LPVFTGECKECPHCHSEESNMCDLLR 67
            P + GHE  G VE VG GV DL  GD V     LP     C +C +C   E ++C    
Sbjct: 52  PPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLP-----CGKCEYCKKGEYSLCS--- 103

Query: 68  INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINP-------AAPLD 120
              +   +   G  R                F+EY       + KI P       AA ++
Sbjct: 104 ---NYDYI---GSRRDG-------------AFAEYVSVPARNLIKI-PDHVDYEEAAMIE 143

Query: 121 KVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS 180
              V          A V +A    G +V + G G +GL A +  ++ GA R+I VD++  
Sbjct: 144 PAAV-------ALHA-VRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDE 195

Query: 181 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGW 239
           +   A++ G  + +NPK+ D    + + ++T G G D  +E  GS   +  A      G 
Sbjct: 196 KLAVARELGADDTINPKEED---VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG- 251

Query: 240 GVAVLVGVPNKDDAFKTHPMN--LLNERTLKGTFFGNYK--PRSDLPSVVEKYMNKELEV 295
           G  VLVG+P  D           L  E T++G++       P  +  + ++   + +++V
Sbjct: 252 GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKV 311

Query: 296 EKFITHTVPFSEINKAFDLMLAGE 319
           E  ITH +P  +   AF+ +   E
Sbjct: 312 EPLITHRLPLEDGPAAFERLADRE 335

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  146 bits (370), Expect = 4e-41
 Identities = 99/329 (30%), Positives = 148/329 (44%), Gaps = 46/329 (13%)

Query: 8   GQTPLF--PRIFGHEAGGIVESVGEGVTDLQPGDHV--LPVFTGECKECPHCHSEESNMC 63
           G+ P    PRI GHE  G V  VGEGV  L+ GD V   P     C EC  C     N C
Sbjct: 46  GRNPFASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYI--SCGECYACRKGRPNCC 103

Query: 64  DLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVC 123
           + L++    GV  + G                   F+EY V     +  +     LD+  
Sbjct: 104 ENLQV---LGVHRDGG-------------------FAEYIVVPADAL-LVPEGLSLDQAA 140

Query: 124 VLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFN 183
           ++   ++ G  A V  A    G +V + G G +GL   + A+  GA R+I VD++  R  
Sbjct: 141 LVEP-LAIGAHA-VRRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLE 197

Query: 184 EAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVA 242
            A++ G  + +N  D D  V   + ++T+G G D  ++ TG+  +M  A E V  G G  
Sbjct: 198 FARELGADDTINVGDED--VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRV 254

Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFG--NYKPRSDLPSVVEKYMNKELEVEKFIT 300
           VLVG+      F   P    +++ L  T  G  N   R D P V++   + +++ E  IT
Sbjct: 255 VLVGLSKGPVTF---PDPEFHKKEL--TILGSRNAT-REDFPDVIDLLESGKVDPEALIT 308

Query: 301 HTVPFSEINKAFDLMLAGES--IRCIIRM 327
           H  PF ++ +AFDL  A     I+ +I  
Sbjct: 309 HRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  146 bits (370), Expect = 4e-41
 Identities = 89/330 (26%), Positives = 141/330 (42%), Gaps = 61/330 (18%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHV-----LPVFTGECKECPHCHSEESNMCDLLRI 68
           P + GHE+ G V +VG GVT L+ GD V     +P     C+ C  C S   N+C  +R 
Sbjct: 55  PMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVP-----CRTCEFCKSGRYNLCPDMRF 109

Query: 69  NTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINP------AAPLDKV 122
                    DG                  T   Y         K+         A ++  
Sbjct: 110 ---AATPPVDG------------------TLCRYVNHPADFCHKLPDNVSLEEGALVE-- 146

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
             LS G+          A  + G +V +FG G +GL  A  A+  GA++++  D++PSR 
Sbjct: 147 -PLSVGV-----HACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRL 200

Query: 183 NEAKKFGVTEFVNPKDYDKP-VQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWG 240
             AK+ G T  VN +  D P   + IA++  G G D  +ECTG+   + +A      G G
Sbjct: 201 EFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-G 259

Query: 241 VAVLVGVPNKDDAFKTHPMNLLNER--TLKGTF-FGNYKPRSDLPSVVEKYMNKELEVEK 297
             VLVG+   +      P++  + R   ++G F + N       P+ +E   + +++V+ 
Sbjct: 260 TVVLVGMGKPEVTL---PLSAASLREIDIRGVFRYAN-----TYPTAIELLASGKVDVKP 311

Query: 298 FITHTVPFSEINKAFDLMLAG--ESIRCII 325
            ITH  P  +  +AF+    G    I+ +I
Sbjct: 312 LITHRFPLEDAVEAFETAAKGKKGVIKVVI 341

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  145 bits (368), Expect = 6e-41
 Identities = 88/323 (27%), Positives = 142/323 (43%), Gaps = 49/323 (15%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGE----CKECPHCHSEESNMCDLLRI 68
            P + GHE  G+V +VG  VT  + GD V      +    C EC +C     N+C+ L  
Sbjct: 52  PPLVPGHEFAGVVVAVGSKVTGFKVGDRV----AVDPNIYCGECFYCRRGRPNLCENL-- 105

Query: 69  NTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCV---L 125
            T  GV  N G                   F+EY V     V KI      ++  +   L
Sbjct: 106 -TAVGVTRNGG-------------------FAEYVVVPAKQVYKIPDNLSFEEAALAEPL 145

Query: 126 SCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA 185
           SC +    G  +++   K G SV +FG G +GL  A+  +++GASR+   + N  +   A
Sbjct: 146 SCAV---HG--LDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELA 200

Query: 186 KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245
           KK G TE V+P   D   Q    +    G D  +E TG  + +  A E    G G  ++ 
Sbjct: 201 KKLGATETVDPSREDPEAQ---KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVF 256

Query: 246 GVPNKDDAFKTHPMNLLN-ERTLKGTFFGNYK-PRSDLPSVVEKYMNKELEVEKFITHTV 303
           GV   D      P  +   E T+ G+F   Y  PR+     +    + +++V+  ++H +
Sbjct: 257 GVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRA-----IALLESGKIDVKGLVSHRL 311

Query: 304 PFSEINKAFDLMLAGESIRCIIR 326
           P  E+ +A + M +G +++ ++ 
Sbjct: 312 PLEEVPEALEGMRSGGALKVVVV 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  145 bits (369), Expect = 8e-41
 Identities = 81/335 (24%), Positives = 136/335 (40%), Gaps = 36/335 (10%)

Query: 6   RWGQTPLFPRIFGHEAGGIVESVGEGVTD------LQPGDHVL-PVFTGECKECPHCHSE 58
           R  + PL P I GHE  G V ++G GVT       L+ GD V   V    C  C  C   
Sbjct: 48  RRPRVPL-PIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAP-CGRCYRCLVG 105

Query: 59  ESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGC-VAKINPAA 117
           +   C+  +                        H  G   ++E+     G  + ++    
Sbjct: 106 DPTKCENRKK-----YGHEASCDD--------PHLSGG--YAEHIYLPPGTAIVRVPDNV 150

Query: 118 PLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL 177
           P +     +C ++T   A         G +V + G G +GL A   A+++GA R+I +D 
Sbjct: 151 PDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDG 210

Query: 178 NPSRFNEAKKFGVTEFVNPKDYDKP-VQQVIADMTNG-GVDRSVECTGSVQAMISAFECV 235
           +P R   A++FG    ++  +   P  + ++ D+T G G D  +E +G   A+    E +
Sbjct: 211 SPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELL 270

Query: 236 HDGWGVAVLVGV--PNKDDAFKTHPMNLLNERTLKGTFFGNYKPR--SDLPSVVEKYMNK 291
             G G  VLVG   P          +      T+ G    NY P         +E+  ++
Sbjct: 271 RRG-GTYVLVGSVAPAGTVPLDPERIV-RKNLTIIGVH--NYDPSHLYRAVRFLERTQDR 326

Query: 292 ELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 326
                + +TH  P  +IN+A +L  +G +++ +I 
Sbjct: 327 FP-FAELVTHRYPLEDINEALELAESGTALKVVID 360

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  141 bits (359), Expect = 4e-39
 Identities = 92/329 (27%), Positives = 140/329 (42%), Gaps = 44/329 (13%)

Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVM 75
           I GHE  G+VE VG  V +L+ GD V+  FT  C EC +C     + CD    N    + 
Sbjct: 57  ILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCD--NTNPSAEMA 114

Query: 76  INDGQSRFSIKGKPIYHFVG--TSTFSEYT---VTHVGCVAKINPAAPLDKVCVLSCGIS 130
              G +   I G    H  G      +EY       VG   KI      +K   LS  + 
Sbjct: 115 KLYGHAGAGIFGYS--HLTGGYAGGQAEYVRVPFADVGPF-KIPDDLSDEKALFLSDILP 171

Query: 131 TGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV 190
           TG+ A    A+ K G +VA++G G VGL AA  A++ GA R+I +D  P R   A+    
Sbjct: 172 TGYHAAEL-AEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLG 230

Query: 191 TEFVNPKDYDKPVQQVIADMTNG-GVDRSVEC---------------------TGSVQAM 228
            E +N ++ D  V + + ++T G G D  ++                      T    A+
Sbjct: 231 AETINFEEVDDVV-EALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDAL 289

Query: 229 ISAFECVHDGWGVAVLVGV-PNKDDAFKTHPMNLLNER--TLKGTFFGNYKPRSDLPSVV 285
             A + V  G G   ++GV     + F   P+     +  TL+    G    +  LP ++
Sbjct: 290 REAIQAVRKG-GTVSIIGVYGGTVNKF---PIGAAMNKGLTLRM---GQTHVQRYLPRLL 342

Query: 286 EKYMNKELEVEKFITHTVPFSEINKAFDL 314
           E   + EL+    ITH +P  +  +A+ +
Sbjct: 343 ELIESGELDPSFIITHRLPLEDAPEAYKI 371

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  140 bits (355), Expect = 4e-39
 Identities = 88/324 (27%), Positives = 135/324 (41%), Gaps = 41/324 (12%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           W    L P I GHE  G V  VGEGVT L+ GD V +      C EC +C S   N+C  
Sbjct: 52  WPVPKL-PLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPN 110

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
            +I              ++  G           ++EY V     V KI     L +   L
Sbjct: 111 QKITG------------YTTDG----------GYAEYVVVPARYVVKIPEGLDLAEAAPL 148

Query: 126 SCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA 185
            C   T + A +  A  K G+ VA+ G G +G  A + A+  GA  +I +  +  +   A
Sbjct: 149 LCAGITTYRA-LKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELA 206

Query: 186 KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245
           KK G    +N  D    ++ V         D  ++  G    +  + + +  G G  VLV
Sbjct: 207 KKLGADHVINSSD-SDALEAV-----KEIADAIIDTVGPA-TLEPSLKALRRG-GTLVLV 258

Query: 246 GVPNKDDAFKTHPMNL-LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVP 304
           G+P            L L E ++ G+  G    R+DL   ++     E +++  I  T+P
Sbjct: 259 GLPGGGPIPLLPAFLLILKEISIVGSLVGT---RADLEEALD--FAAEGKIKPEILETIP 313

Query: 305 FSEINKAFDLMLAGESIRCIIRMD 328
             EIN+A++ M  G+ +R    +D
Sbjct: 314 LDEINEAYERMEKGK-VRGRAVID 336

Length = 339

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  138 bits (351), Expect = 2e-38
 Identities = 93/313 (29%), Positives = 136/313 (43%), Gaps = 42/313 (13%)

Query: 15  RIFGHEAGGIVESVGEGVTDLQPGDHVL-PVFTGECKECPHCHSEESNMCDLLRINTDRG 73
            I GHEA G+VE VG  V D +PGD V+ P  T              +           G
Sbjct: 55  MILGHEAVGVVEEVGSEVKDFKPGDRVIVPAIT-PDWRSVAAQRGYPSQS---------G 104

Query: 74  VMINDGQSRFS-IKGKPIYHFVGTSTFSEYTVTHV----GCVAKINPAAPLDKVCVLSCG 128
            M+  G  +FS  K            F+EY   HV      +A +      ++  +L   
Sbjct: 105 GML--GGWKFSNFKD---------GVFAEYF--HVNDADANLAPLPDGLTDEQAVMLPDM 151

Query: 129 ISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF 188
           +STGF      A  K G +VA+FG+G VGL A  GAR+ GA RII V   P+R   AK++
Sbjct: 152 MSTGFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEY 210

Query: 189 GVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
           G T+ V+ K+ D  V+Q++  +T G GVD  +   G       A + +  G G    V  
Sbjct: 211 GATDIVDYKNGD-VVEQIL-KLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNY 267

Query: 248 PNKDDAFK--THPMNL-LNERTLKGTFFGNYKPR-SDLPSVVEKYMNKELEVEKFITH-T 302
             +DD          + +  +T+ G      + R   L S++E      ++  K +TH  
Sbjct: 268 YGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIE---YGRVDPSKLLTHHF 324

Query: 303 VPFSEINKAFDLM 315
             F +I +A  LM
Sbjct: 325 FGFDDIEEALMLM 337

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  138 bits (349), Expect = 4e-38
 Identities = 83/316 (26%), Positives = 124/316 (39%), Gaps = 38/316 (12%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
           P   GHE  G V  VG GVT+ + GD V       C  C  C     N+C          
Sbjct: 57  PLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCL--------- 107

Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGF 133
              N G     I G           F+EY V     +  +    P  +  V +  + T +
Sbjct: 108 ---NQGMPGLGIDG----------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPY 154

Query: 134 GATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF 193
            A V   + K G++V + GLG +GL A + A+  GA  +I VD+   +   AK+ G  E 
Sbjct: 155 HAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEV 213

Query: 194 VNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDA 253
           +N  D D P  +  A    GG D   +  G+      A + V  G G  V+VG+      
Sbjct: 214 LNSLD-DSPKDKKAAG-LGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLT 270

Query: 254 FKTHPMNLLNER--TLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA 311
                ++ L  R   + G+F G      DLP V++     +L        T P  EI + 
Sbjct: 271 V---DLSDLIARELRIIGSFGG---TPEDLPEVLDLIAKGKL---DPQVETRPLDEIPEV 321

Query: 312 FDLMLAGE-SIRCIIR 326
            + +  G+   R ++ 
Sbjct: 322 LERLHKGKVKGRVVLV 337

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  136 bits (345), Expect = 2e-37
 Identities = 82/307 (26%), Positives = 131/307 (42%), Gaps = 34/307 (11%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
           P + GHE  G+V  VGE V+  + GD V   F   C  CP+C + +SN+C+         
Sbjct: 55  PHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQV------ 108

Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTH---VGCVAKINPAAPLDKVCVLSCGIS 130
                 Q  F+  G          +F+EY       V  V ++           L C  +
Sbjct: 109 ------QPGFTHPG----------SFAEYVAVPRADVNLV-RLPDDVDFVTAAGLGCRFA 151

Query: 131 TGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV 190
           T F A V+ A+ K G+ VA+ G G VGL+A   A   GA R+I VD++  +   A++ G 
Sbjct: 152 TAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGA 210

Query: 191 TEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250
              VN  + +     V  D+T GG   SV+  G  +   ++   +    G  V VG+   
Sbjct: 211 VATVNASEVEDVAAAV-RDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLG 268

Query: 251 DDAFKTHPMNLL--NERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEI 308
           ++A    PM+ +   E  + G+  G   P     +++    + +L+ E  +  T+   E 
Sbjct: 269 EEAGVALPMDRVVARELEIVGS-HGM--PAHRYDAMLALIASGKLDPEPLVGRTISLDEA 325

Query: 309 NKAFDLM 315
             A   M
Sbjct: 326 PDALAAM 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  133 bits (336), Expect = 3e-36
 Identities = 89/321 (27%), Positives = 127/321 (39%), Gaps = 46/321 (14%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           W   P  P I GHE  G+V +VG GV+ L+ GD V +      C +C +C + +  +C  
Sbjct: 50  WPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCP- 108

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
            + N+   V   DG                  TF+EY +     V  I      ++   L
Sbjct: 109 NQKNSGYTV---DG------------------TFAEYAIADARYVTPIPDGLSFEQAAPL 147

Query: 126 SCGISTGFGATVNVAKPKKGQSVAIFGLG------AVGLAAAEGARVSGASRIIGVDLNP 179
            C   T + A +  A  K G  V I G G       V  A A G RV      I +D+  
Sbjct: 148 LCAGVTVYKA-LKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRV------IAIDVGD 200

Query: 180 SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGW 239
            +   AK+ G   FV+ K  D  V+ V      GG    V    S  A   A + +  G 
Sbjct: 201 EKLELAKELGADAFVDFKKSD-DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG- 258

Query: 240 GVAVLVGVPNKDDAFKTHPMNL-LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKF 298
           G  V VG+P         P +L L   T+ G+  G    R DL   +E       +V+  
Sbjct: 259 GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSLVGT---RQDLQEALE--FAARGKVKPH 312

Query: 299 ITHTVPFSEINKAFDLMLAGE 319
           I   VP  ++N+ F+ M  G+
Sbjct: 313 IQ-VVPLEDLNEVFEKMEEGK 332

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  131 bits (333), Expect = 8e-36
 Identities = 89/314 (28%), Positives = 138/314 (43%), Gaps = 27/314 (8%)

Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVM 75
           + GHE  G V  VG  V  L+ GD V+  FT  C EC +C   +S  C        +G +
Sbjct: 56  VLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCA-------KGGL 108

Query: 76  INDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGA 135
                S      +  Y  V    F++ T+       K+      +   +L   + TG+  
Sbjct: 109 FGYAGSPNLDGAQAEYVRV---PFADGTLL------KLPDGLSDEAALLLGDILPTGYFG 159

Query: 136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVN 195
               A+ + G +VA+ G G VGL A   A+V GA+R+  VD  P R   A   G  E +N
Sbjct: 160 -AKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALG-AEPIN 217

Query: 196 PKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAF 254
            +D  +PV++V  + T G G D  +E  G   A+  AF+ V    GV   VGV    + F
Sbjct: 218 FED-AEPVERV-REATEGRGADVVLEAVGGAAALDLAFDLVRP-GGVISSVGVHT-AEEF 273

Query: 255 KTHPMNLLN-ERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFD 313
               ++  N   TL+   FG    RS  P ++    +  L++E  I H +P  E  +A+ 
Sbjct: 274 PFPGLDAYNKNLTLR---FGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYR 330

Query: 314 LMLAGESIRCIIRM 327
           L    + ++ ++  
Sbjct: 331 LFDKRKVLKVVLDP 344

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  128 bits (324), Expect = 2e-34
 Identities = 90/322 (27%), Positives = 142/322 (44%), Gaps = 50/322 (15%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGE----CKECPHCHSEESNMCDLLRI- 68
           P IFGHE  G V  VGEGVT ++ GD+V    + E    C +C  C +   ++C   +I 
Sbjct: 58  PLIFGHEFAGEVVEVGEGVTRVKVGDYV----SAETHIVCGKCYQCRTGNYHVCQNTKIL 113

Query: 69  NTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCG 128
             D      DG                   F+EY V     + K +   P +   + S  
Sbjct: 114 GVDT-----DG------------------CFAEYVVVPEENLWKNDKDIPPE---IAS-- 145

Query: 129 ISTGFGATVN--VAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK 186
           I    G  V+  +A    G+SV I G G +GL A   A+ +GAS +I  D NP R   AK
Sbjct: 146 IQEPLGNAVHTVLAGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAK 205

Query: 187 KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246
           K G    +NP++ D  V +V +     GVD  +E +G+ +A+    + +  G G   ++G
Sbjct: 206 KMGADVVINPREED--VVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILG 262

Query: 247 VPNKDDAFKTHPMNLLNERTLKG-TFFGNYKPR--SDLPSVVEKYMNKELEVEKFITHTV 303
           +P           +L N    KG T  G    +       V     + ++++   ITH +
Sbjct: 263 LPPGPVDI-----DLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKL 317

Query: 304 PFSEINKAFDLMLAGESIRCII 325
           P  +  +AF+LM +G+  + ++
Sbjct: 318 PLEDFEEAFELMRSGKCGKVVL 339

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  120 bits (302), Expect = 3e-31
 Identities = 86/315 (27%), Positives = 135/315 (42%), Gaps = 24/315 (7%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
            P   GHE  G+VE VG  VT ++PGD V+  F      CP C +  +  C     +   
Sbjct: 53  APAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCV----HGGF 108

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
                DG       G+  Y  V     ++ T+  V      +    L  +  LS  + TG
Sbjct: 109 WGAFVDG-------GQGEYVRV---PLADGTLVKVPGSPS-DDEDLLPSLLALSDVMGTG 157

Query: 133 FGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE 192
             A V  A  + G +V + G GAVGL A   A+  GA RII +  +  R   A++FG T+
Sbjct: 158 HHAAV-SAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATD 216

Query: 193 FVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251
            V  +  ++ V +V  ++T G G D  +EC G+ ++M  A      G G    VGVP+  
Sbjct: 217 IVAERG-EEAVARVR-ELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG 273

Query: 252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA 311
                  +   N   L G   G    R  LP +++  +   +   +    T+P  E+ + 
Sbjct: 274 VELDVRELFFRN-VGLAG---GPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEG 329

Query: 312 FDLMLAGESIRCIIR 326
           +  M    +I+ ++R
Sbjct: 330 YRAMDERRAIKVLLR 344

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  111 bits (281), Expect = 2e-28
 Identities = 94/308 (30%), Positives = 135/308 (43%), Gaps = 44/308 (14%)

Query: 15  RIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCD----LLRINT 70
           RI GHE  G+VE VG  VT+ + GD VL      C  C +C     + C+    +L    
Sbjct: 56  RILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWIL---- 111

Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
             G +I+  Q+ +      I H    +  S Y         K+      +   +LS  + 
Sbjct: 112 --GNLIDGTQAEYV----RIPH----ADNSLY---------KLPEGVDEEAAVMLSDILP 152

Query: 131 TGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV 190
           TG+   V   K K G +VAI G G VGLAA   A++   S+II VDL+ +R   AKK G 
Sbjct: 153 TGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGA 212

Query: 191 TEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFE-C---VHDGWGVAVLV 245
           T  VN    D    + + ++T+G GVD  +E  G + A    FE C   V  G G    V
Sbjct: 213 THTVNSAKGD--AIEQVLELTDGRGVDVVIEAVG-IPA---TFELCQELVAPG-GHIANV 265

Query: 246 GVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPF 305
           GV  K        + + N  T+              P +++   + +L+  K +TH    
Sbjct: 266 GVHGKPVDLHLEKLWIKN-ITITTGLVDTN----TTPMLLKLVSSGKLDPSKLVTHRFKL 320

Query: 306 SEINKAFD 313
           SEI KA+D
Sbjct: 321 SEIEKAYD 328

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  107 bits (271), Expect = 6e-27
 Identities = 93/325 (28%), Positives = 136/325 (41%), Gaps = 67/325 (20%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGE----CKECPHCHSEESNMCDLLRIN 69
           P + GHE  G V  VG  VT  + GD V    +GE    C  C +C +   ++C     N
Sbjct: 58  PMVVGHEFVGEVVEVGSEVTGFKVGDRV----SGEGHIVCGHCRNCRAGRRHLC----RN 109

Query: 70  TDRGVMIN-DGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCG 128
           T +GV +N  G                   F+EY V     V KI    P D   + +  
Sbjct: 110 T-KGVGVNRPG------------------AFAEYLVIPAFNVWKIPDDIPDD---LAA-- 145

Query: 129 ISTGFGATVNVA--KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK 186
           I   FG  V+ A      G+ V I G G +G+ AA  A+  GA  ++  D+N  R   A+
Sbjct: 146 IFDPFGNAVHTALSFDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR 205

Query: 187 KFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245
           K G T  VN    D  ++ V+A++    G D  +E +G+  A     + ++ G  +A+L 
Sbjct: 206 KMGATRAVNVAKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAML- 262

Query: 246 GVPNKDDAFKTHPMNLLNERTLKG-TFFGN---------YKPRSDLPSVVEKYMNKELEV 295
           G+P  D A         N+   KG T  G          YK  + L S         L++
Sbjct: 263 GIPPGDMAID------WNKVIFKGLTIKGIYGREMFETWYKMSALLQS--------GLDL 308

Query: 296 EKFITHTVPFSEINKAFDLMLAGES 320
              ITH  P  +  K F+ M +G+S
Sbjct: 309 SPIITHRFPIDDFQKGFEAMRSGQS 333

Length = 341

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  106 bits (268), Expect = 2e-26
 Identities = 78/317 (24%), Positives = 129/317 (40%), Gaps = 38/317 (11%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTD 71
            P + GHE  G V +VG    D++ GD VL V+    C ECP C + + N+C   R    
Sbjct: 66  LPLVLGHEIVGEVVAVGPDAADVKVGDKVL-VYPWIGCGECPVCLAGDENLCAKGRAL-- 122

Query: 72  RGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 131
            G+  + G                   ++EY +                    L+C   T
Sbjct: 123 -GIFQDGG-------------------YAEYVIVPHSRYLVDPGGLDPALAATLACSGLT 162

Query: 132 GFGA--TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189
            + A   +        + V I G G +GL A    +  G + II VD++ ++   AK  G
Sbjct: 163 AYSAVKKLMPLVAD--EPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAG 220

Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
               VN  D D    + I     GGVD  ++   +      AF+ +  G G  VLVG+  
Sbjct: 221 ADVVVNGSDPD--AAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFG 277

Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
            +      P+  L   T++G++ G+     +L  +V   + K  +++       P S++N
Sbjct: 278 GEATLPL-PLLPLRALTIQGSYVGSL---EELRELVA--LAKAGKLKPIPLTERPLSDVN 331

Query: 310 KAFDLMLAGESI-RCII 325
            A D + AG+ + R ++
Sbjct: 332 DALDDLKAGKVVGRAVL 348

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  106 bits (266), Expect = 2e-26
 Identities = 76/325 (23%), Positives = 133/325 (40%), Gaps = 59/325 (18%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
           P I GHE  G VE VGEGV   +PGD V+  +   C +C +C S E N+C          
Sbjct: 55  PLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA------ 108

Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGF 133
                            Y       F+EY       + K+      +   + +C + T  
Sbjct: 109 ----------------EYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAV 152

Query: 134 GATVNVAKPKKGQSVAI-FGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE 192
            A    A  KKG +V +    G VG+ A + A+  GA R+I V  +P +    K+ G   
Sbjct: 153 HAL-KRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADY 210

Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTG------SVQAMISAFECVHDGWGVAVLVG 246
            ++   + + V+++      GG D  +E  G      S++++           G  VL+G
Sbjct: 211 VIDGSKFSEDVKKL------GGADVVIELVGSPTIEESLRSLNKG--------GRLVLIG 256

Query: 247 VPNKDDAFKTHPMNL----LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
             N        P+      L E  + G+       ++D+   ++  + KE +++  I   
Sbjct: 257 --NVTPDP--APLRPGLLILKEIRIIGSISAT---KADVEEALK--LVKEGKIKPVIDRV 307

Query: 303 VPFSEINKAFDLMLAGESI-RCIIR 326
           V   +IN+A + + +G+ + R +++
Sbjct: 308 VSLEDINEALEDLKSGKVVGRIVLK 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  104 bits (262), Expect = 2e-25
 Identities = 69/235 (29%), Positives = 102/235 (43%), Gaps = 37/235 (15%)

Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
                 + GHEA G VE VG  V  L+ GD V+  F   C  C +C    + +C  L +N
Sbjct: 50  GAEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVC--LTVN 107

Query: 70  TDRGVMINDGQSRFSIKGKPI------YHFVGTSTFSEYTVTHVGCVAKI--NPAAPLDK 121
             R      G +   +   P       Y  V  + F+         + K+     A    
Sbjct: 108 PGR-----AGGAYGYVDMGPYGGGQAEYLRVPYADFN---------LLKLPDRDGAKEKD 153

Query: 122 VCVLSCGI-STGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS 180
             ++   I  TG+     +A  + G +VA+FG G VGL AA  A + GASR+  VD  P 
Sbjct: 154 DYLMLSDIFPTGWHGLE-LAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPE 212

Query: 181 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECV 235
           R + A+  G    ++  D D PV+Q++  +  GGVDR+V+C G        +E  
Sbjct: 213 RLDLAESIGA-IPIDFSDGD-PVEQILG-LEPGGVDRAVDCVG--------YEAR 256

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 98.5 bits (246), Expect = 2e-25
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 5/134 (3%)

Query: 155 AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG- 213
            VGLAA + A+  GA+R+I VD +  +   AK+ G    +N +D D    + + ++T G 
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDED--FVERVRELTGGR 58

Query: 214 GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFG 273
           GVD  ++C G+   +  A E +  G G  V+VG+P            LL E T+ G+  G
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPG-GRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGG 117

Query: 274 NYK-PRSDLPSVVE 286
             +     L  +  
Sbjct: 118 GREEFEEALELLAS 131

Length = 131

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 98.4 bits (245), Expect = 2e-23
 Identities = 93/333 (27%), Positives = 149/333 (44%), Gaps = 56/333 (16%)

Query: 7   WGQTPL-FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGE----CKECPHCHSEESN 61
           W Q+ +  P++ GHE  G V  +G GV  ++ GD+V    + E    C +C  C   + +
Sbjct: 48  WAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV----SVETHIVCGKCYACRRGQYH 103

Query: 62  MCDLLRINTDRGVMIN-DGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLD 120
           +C     NT +   ++ DG                   F+EY V     + K NP +   
Sbjct: 104 VCQ----NT-KIFGVDTDG------------------CFAEYAVVPAQNIWK-NPKSIPP 139

Query: 121 KVCVLSCGISTGFGATVN--VAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178
           +       I    G  V+  +A P  G+SV + G G +GL A   A+ SGA  +I  D N
Sbjct: 140 EYA----TIQEPLGNAVHTVLAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPN 195

Query: 179 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHD 237
             R   AKK G T  VNP   D  V + +AD+T+G GVD  +E +G+ +A+    + V  
Sbjct: 196 EYRLELAKKMGATYVVNPFKED--VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTP 253

Query: 238 GWGVAVLVGVPNKDDAFKTHPM--NLLNERTLKGTFFGNYKPR---SDLPSVVEKYMNKE 292
           G  V++L G+P          +  +  N+   KG        R       +V     + +
Sbjct: 254 GGRVSLL-GLP-------PGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGK 305

Query: 293 LEVEKFITHTVPFSEINKAFDLMLAGESIRCII 325
           L+++  ITH   F +  K F+LM +G++ + I+
Sbjct: 306 LDLDPIITHKFKFDKFEKGFELMRSGQTGKVIL 338

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 97.8 bits (244), Expect = 2e-23
 Identities = 67/319 (21%), Positives = 110/319 (34%), Gaps = 68/319 (21%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLL 66
           W   P  P   GHE  G V ++G GV  L  GD V                         
Sbjct: 45  WFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA------------------------ 80

Query: 67  RINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLS 126
                                      +    F+EY +        + P+    +     
Sbjct: 81  --------------------------GLSGGAFAEYDLADADHAVPL-PSLLDGQA---- 109

Query: 127 CGISTGFGATVNV---AKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFN 183
                  G  +NV      + G++VA+ G G +GL   + A  +GA R+I +D  P+R  
Sbjct: 110 -FPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLA 168

Query: 184 EAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVA 242
            A++ G TE V   D  + + + + ++T G G D  +E  G    +  A E V +  G  
Sbjct: 169 LARELGATEVVT--DDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRL 225

Query: 243 VLVGVPNKDDAFKTHPMNLLNER--TLKGTFFGNYKP-RSDLPSVVEKYMNKELEVEKFI 299
           V+ G     D  +  P    N +   L      + +     +   V+   +  L++   +
Sbjct: 226 VIFGYH--QDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLL 283

Query: 300 THTVPFSEINKAFDLMLAG 318
           TH  P  E+  AF+     
Sbjct: 284 THEFPLEELGDAFEAARRR 302

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 97.3 bits (243), Expect = 4e-23
 Identities = 85/310 (27%), Positives = 118/310 (38%), Gaps = 47/310 (15%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHV-----LPVFTGECKECPHCHSEESNMCDLLRI 68
           P + GHE  G+VE+VG GVT L PG  V      P     C  C +C +   N+C     
Sbjct: 54  PMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRP-----CGTCDYCRAGRPNLC----- 103

Query: 69  NTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCG 128
                +       RF     P  H  G   F EY V        +     L +   L+  
Sbjct: 104 ---LNMRFLGSAMRF-----P--HVQGG--FREYLVVDASQCVPLPDGLSL-RRAALAEP 150

Query: 129 ISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF 188
           ++    A VN A    G+ V + G G +G      AR +GA+ I+  DL  +    A+  
Sbjct: 151 LAVALHA-VNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAM 209

Query: 189 GVTEFVNPKDYDKPVQQVIADMTNGG-VDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
           G  E VN          + A   + G  D   E +G+  A+ SA   V  G G  V VG+
Sbjct: 210 GADETVNLAR-----DPLAAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGM 263

Query: 248 PNKDDAFKTHPMNLL--NERTLKGTF-FGNYKPRSDLPSVVEKYMNKELEVEKFITHTVP 304
                     P+N L   E  L+G+F F       +    V       ++V   IT   P
Sbjct: 264 LGGPVPL---PLNALVAKELDLRGSFRFD-----DEFAEAVRLLAAGRIDVRPLITAVFP 315

Query: 305 FSEINKAFDL 314
             E  +AF L
Sbjct: 316 LEEAAEAFAL 325

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score = 96.1 bits (240), Expect = 1e-22
 Identities = 80/338 (23%), Positives = 129/338 (38%), Gaps = 70/338 (20%)

Query: 1   MGFDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVL--PVFTGECKECPHCHSE 58
           +            P   GHE  G VE VG GV  L+ GD V+  P +   C  C +C   
Sbjct: 45  IDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWG--CGTCRYCRRG 102

Query: 59  ESNMCDLLR---INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINP 115
           E N C+  R   I TD G                         F+EY +     + K+  
Sbjct: 103 EENYCENARFPGIGTDGG-------------------------FAEYLLVPSRRLVKLPR 137

Query: 116 ------AAPLDKVCVLSCGISTGFGATVN-VAKPKKGQSVAIFGLGAVGLAAAEGARVSG 168
                 AAPL      +    T + A    +     G +V + G+G +G  A +  R   
Sbjct: 138 GLDPVEAAPL------ADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALT 191

Query: 169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQA 227
            + +I VD +      A++ G    +N    D  V++V  ++T G G D  ++  GS + 
Sbjct: 192 PATVIAVDRSEEALKLAERLGADHVLNAS--DDVVEEV-RELTGGRGADAVIDFVGSDET 248

Query: 228 MISAFECVHDGWGVAVLVG------VPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDL 281
           +  A + +  G G  V+VG      +P         P     E ++ G+ +G     ++L
Sbjct: 249 LALAAKLLAKG-GRYVIVGYGGHGRLP----TSDLVPT----EISVIGSLWGTR---AEL 296

Query: 282 PSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE 319
             VV    + +++VE       P  + N+A D +  G 
Sbjct: 297 VEVVALAESGKVKVE---ITKFPLEDANEALDRLREGR 331

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 96.0 bits (240), Expect = 1e-22
 Identities = 78/338 (23%), Positives = 115/338 (34%), Gaps = 83/338 (24%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           WG T  +P + GHE  GIV +VG  VT  + GD V +      C  C  C S E   C  
Sbjct: 48  WGPTK-YPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCP- 105

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTST--FSEYTVTHVGCVAKINPAAPLDKVC 123
                   V  N             Y     +   ++++ V     V KI          
Sbjct: 106 -----KGVVTYNG-----------KYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAA 149

Query: 124 VLSCGISTGFGATV------NVAKPKKGQSVAIFGLG-----AVGLAAAEGARVSGASRI 172
            L C      G TV      N   P  G+ V + G+G     AV  A A GA V+  SR 
Sbjct: 150 PLLCA-----GITVYSPLKRNGVGP--GKRVGVVGIGGLGHLAVKFAKALGAEVTAFSR- 201

Query: 173 IGVDLNPSRFNEAKKFGVTEFVNPKD------YDKPVQQVIADMTNGGVDRSVECTGSVQ 226
                +PS+  +A K G  EF+  KD          +  +I              T S  
Sbjct: 202 -----SPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLII-------------DTVSAS 243

Query: 227 AMISAF---ECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPS 283
             +  +          G  VLVG P +       P+ +   +++ G+  G          
Sbjct: 244 HDLDPYLSLLKPG---GTLVLVGAPEEPLPVPPFPL-IFGRKSVAGSLIGG-------RK 292

Query: 284 VVEKYMNKELEVEKFIT---HTVPFSEINKAFDLMLAG 318
             ++ +  +   E  I      +P   IN+A + +  G
Sbjct: 293 ETQEML--DFAAEHGIKPWVEVIPMDGINEALERLEKG 328

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 95.0 bits (237), Expect = 1e-22
 Identities = 72/325 (22%), Positives = 109/325 (33%), Gaps = 89/325 (27%)

Query: 12  LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTD 71
             P   G+ + G V  VG GVT  +PGD V          C   H+E             
Sbjct: 19  PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVF---------CFGPHAE------------- 56

Query: 72  RGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 131
                                           V     +  +    P +          T
Sbjct: 57  ------------------------------RVVVPANLLVPLPDGLPPE------RAALT 80

Query: 132 GFGAT----VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK 187
              AT    V  A+P+ G+ VA+ GLG VGL AA+ A+ +GA  ++GVD + +R   A+ 
Sbjct: 81  ALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEA 140

Query: 188 FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
            G  + V     D        ++   G D  +E +GS  A+ +A   + D  G  VLVG 
Sbjct: 141 LGPADPVAADTAD--------EIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGW 191

Query: 248 PNKDDAFKTHPMNLLNERTLKGTFFG--NYKPRSDLP----------SVVEKYMNKELEV 295
                       +      +            R D P            ++  +  E  +
Sbjct: 192 YGLKPLLLGEEFH-FKRLPI---RSSQVYGIGRYDRPRRWTEARNLEEALD--LLAEGRL 245

Query: 296 EKFITHTVPFSEINKAFDLMLAGES 320
           E  ITH VPF +  +A+ L+     
Sbjct: 246 EALITHRVPFEDAPEAYRLLFEDPP 270

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 94.3 bits (235), Expect = 3e-22
 Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 38/266 (14%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGE-CKECPHCHSEESNMCDLLRINTD 71
            P + GHE  G +  VG  V   + GD V+   T   C  CP+C   + N+C        
Sbjct: 55  TPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLC------PH 108

Query: 72  RGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 131
           R   I                      F+EY +     + ++     L+    L+  ++ 
Sbjct: 109 R-KGIGTQAD---------------GGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAV 151

Query: 132 GFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRII-GVDLNPSRFNEAKKFGV 190
              A    +  + G +V +FG G +GL AA+ A++ GA+ ++ G + +  R + AK+ G 
Sbjct: 152 AVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGA 211

Query: 191 T----EFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245
                   +  +          ++T+G G D  +EC+G+V A+  A E +  G G  V V
Sbjct: 212 DAVNGGEEDLAELVN-------EITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQV 263

Query: 246 GVPNKDDAFKTHPMNLLNERTLKGTF 271
           G+     A       +  E ++ G+ 
Sbjct: 264 GIFGPLAASIDVERIIQKELSVIGSR 289

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 89.5 bits (222), Expect = 4e-20
 Identities = 81/319 (25%), Positives = 124/319 (38%), Gaps = 50/319 (15%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP + GHE  G+VE  G+ V + + GD V       C  C  C S   N C         
Sbjct: 87  FPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHC--------- 137

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINP-------------AAPL 119
               N  +  FS  G           F+EY   +     +IN               A +
Sbjct: 138 ---KNLKELGFSADG----------AFAEYIAVNARYAWEINELREIYSEDKAFEAGALV 184

Query: 120 DKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP 179
           +   V   G+    G        + G  V ++G G +GLAA   A+ +GAS++I  +++ 
Sbjct: 185 EPTSVAYNGLFIRGGGF------RPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISE 238

Query: 180 SRFNEAKKFGVTEFVNP-KDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHD 237
            R N AK+ G     NP K  D    + + ++T G G D  VE  G+  A I   E    
Sbjct: 239 ERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIA 298

Query: 238 GWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGN--YKPRSDLPSVVEKYMNKELEV 295
             G  V +G      A  T P++L   +  +    G   +      PSV++   + ++++
Sbjct: 299 INGKIVYIG-----RAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDM 353

Query: 296 EKFITHTVPFSEINKAFDL 314
            K IT   P   I +A   
Sbjct: 354 TKIITARFPLEGIMEAIKA 372

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 85.5 bits (212), Expect = 7e-19
 Identities = 74/314 (23%), Positives = 116/314 (36%), Gaps = 46/314 (14%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRIN 69
             +P + GHE  G V  VG GV   + GD V +    G C  C +C     N+C      
Sbjct: 51  SKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQ----- 105

Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
                 +N G           Y   G   ++EY V        +    PL +   L C  
Sbjct: 106 ----KAVNTG-----------YTTQG--GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAG 148

Query: 130 STGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189
            T + A  + A P+ G+ VA+ G+G +G  A + AR  G    + +  +P +   A+K G
Sbjct: 149 ITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLG 206

Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
             E V+                 GG D  +    S  A  +A   +  G G  VLVG+P 
Sbjct: 207 ADEVVDSGAELD------EQAAAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPE 259

Query: 250 KD----DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPF 305
                 D F       +  +++ G+  G      +      +   K       +  T P 
Sbjct: 260 SPPFSPDIFPLI----MKRQSIAGSTHGGRADLQEALDFAAEGKVKP------MIETFPL 309

Query: 306 SEINKAFDLMLAGE 319
            + N+A++ M  G+
Sbjct: 310 DQANEAYERMEKGD 323

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 85.7 bits (212), Expect = 7e-19
 Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 38/219 (17%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           +P   GHE  G VE+VG GV DL PGD V  V    C  CP C     ++C         
Sbjct: 53  YPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAK------- 105

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTF---SEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
                             Y F+G+      +EY V     +  +    P++    +   I
Sbjct: 106 ------------------YDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PI 146

Query: 130 STGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189
           + G  A  ++A+  +G++V I G G +GL A + A   GA  +  +D+N  +   AK  G
Sbjct: 147 TVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLG 205

Query: 190 VTEFVNPKDYDKP-VQQVIAD-------MTNGGVDRSVE 220
             +  N ++   P +Q V+ +       +   GV ++VE
Sbjct: 206 AMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVE 244

Length = 347

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 84.2 bits (209), Expect = 2e-18
 Identities = 56/180 (31%), Positives = 74/180 (41%), Gaps = 42/180 (23%)

Query: 4   DKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNM 62
           +      P  P I GHE  G VE+VG GVT    GD V +P     C EC +C S   N+
Sbjct: 50  EGDLPP-PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENL 108

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINP------A 116
           CD                +RF+  G   Y   G   ++EY V        I        A
Sbjct: 109 CD---------------NARFT--G---YTVDG--GYAEYMVADERFAYPIPEDYDDEEA 146

Query: 117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVG-----LAAAEGARVSGASR 171
           APL     L  GI  G+ A + +A  K GQ + ++G GA       +A  +GA V   +R
Sbjct: 147 APL-----LCAGI-IGYRA-LKLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTR 199

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 83.8 bits (208), Expect = 3e-18
 Identities = 69/318 (21%), Positives = 127/318 (39%), Gaps = 42/318 (13%)

Query: 8   GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR 67
           G     P I G +  G+VE+VG GVT+++PG  V+      C  C +C +   N+C    
Sbjct: 52  GIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCA--- 108

Query: 68  INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSC 127
                         ++ I G    H  G   ++EY       +  I      ++      
Sbjct: 109 --------------QYGILG---EHVDG--GYAEYVAVPARNLLPIPDNLSFEEAAAAPL 149

Query: 128 GISTGFGATVNVAKPKKGQSVAIFGLGA-VGLAAAEGARVSGASRIIGVDLNPSRFNEAK 186
              T +   V  A+ + G++V + G G+ VG AA + A++ GA  +I    +  +   AK
Sbjct: 150 TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAK 208

Query: 187 KFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245
           + G    ++ +  D    + + ++T   GVD  VE  G+      + + +  G G  V  
Sbjct: 209 ELGADYVIDYRKEDFV--REVRELTGKRGVDVVVEHVGAATWE-KSLKSLARG-GRLVTC 264

Query: 246 GVPNKDDAFKTHPMNL----LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITH 301
           G     +A    P++L      + ++ G+  G    +++L   +      +L+    I  
Sbjct: 265 GATTGYEA----PIDLRHVFWRQLSILGSTMGT---KAELDEALRLVFRGKLKP--VIDS 315

Query: 302 TVPFSEINKAFDLMLAGE 319
             P  E  +A   + + E
Sbjct: 316 VFPLEEAAEAHRRLESRE 333

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 74/333 (22%), Positives = 115/333 (34%), Gaps = 71/333 (21%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLL 66
           +G  P +P I G +  G V  VG GVT  + GD V              H    N     
Sbjct: 48  YGFIPSYPAILGCDFAGTVVEVGSGVTRFKVGDRV----------AGFVHGGNPN----- 92

Query: 67  RINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLS 126
             +   G                         F EY V      AKI      ++   L 
Sbjct: 93  --DPRNG------------------------AFQEYVVADADLTAKIPDNISFEEAATLP 126

Query: 127 CGIST---------GFGATVNVAKP-KKGQSVAIFGLG--AVGLAAAEGARVSGASRIIG 174
            G+ T         G         P  KG+ V I+G G  +VG  A + A+++G  ++I 
Sbjct: 127 VGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWG-GSSSVGTLAIQLAKLAGY-KVIT 184

Query: 175 VDLNPSRFNEAKKFGVTEFVNPKDY-DKPVQQVIADMTNGGVDRSVECTGSVQAMISAFE 233
              +P  F+  K  G        DY D  V + I   T G +  +++C  + ++     E
Sbjct: 185 T-ASPKNFDLVKSLGADAVF---DYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAE 240

Query: 234 CVHDGWG--VAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNK 291
            +    G  +  L+ VP + +        +  +  L  T FG      +   V  KY+ +
Sbjct: 241 ALGRSGGGKLVSLLPVPEETEP----RKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPE 296

Query: 292 ELEVEKFITHTVP-----FSEINKAFDLMLAGE 319
            LE  K   H V         + +  DL+  G+
Sbjct: 297 LLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGK 329

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 80.8 bits (200), Expect = 3e-17
 Identities = 88/320 (27%), Positives = 128/320 (40%), Gaps = 64/320 (20%)

Query: 15  RIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
           RI GHE  GIV+ VG GVT L+ GD V +  F   C  C +C +    +C        R 
Sbjct: 55  RILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLC--------RS 106

Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKI----NPAAPLDKVCVLSCGI 129
           V  N G   +++ G            +E  +       K+    +PA        ++C  
Sbjct: 107 VK-NAG---YTVDG----------GMAEQCIVTADYAVKVPEGLDPAQ----ASSITCAG 148

Query: 130 STGFGATVNVAKPKKGQSVAIFGLGAVG-LAAAEGARVSGASRIIGVDLNPSRFNEAKKF 188
            T + A + V+  K GQ +AI+G G +G LA      V  A ++I VD+N  +   AK+ 
Sbjct: 149 VTTYKA-IKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEV 206

Query: 189 GVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248
           G    +N K  +  V ++I +   GG   +V    +  A   A + V  G G  V VG+P
Sbjct: 207 GADLTINSKRVE-DVAKIIQE-KTGGAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLP 263

Query: 249 NKDDAFKTHPMNLLNERT----------LKGTFFGNYKPRSDLPSVVEKYMNKELEVEKF 298
            +        M+L   R           L GT       R DL    +     E +V   
Sbjct: 264 PES-------MDLSIPRLVLDGIEVVGSLVGT-------RQDLEEAFQ--FGAEGKV-VP 306

Query: 299 ITHTVPFSEINKAFDLMLAG 318
                P  +IN  FD M  G
Sbjct: 307 KVQLRPLEDINDIFDEMEQG 326

Length = 338

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 81.0 bits (200), Expect = 3e-17
 Identities = 84/314 (26%), Positives = 126/314 (40%), Gaps = 52/314 (16%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
           P + GHE  GI+E VG  V  L  GD V       C  C  C     N+C          
Sbjct: 74  PMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLC---------- 123

Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCV--------L 125
                          P   F  T          V   A +    P + V +        L
Sbjct: 124 ---------------PEMKFFATPPVHGSLANQVVHPADLCFKLP-ENVSLEEGAMCEPL 167

Query: 126 SCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA 185
           S G+     A +    P+    V + G G +GL     AR  GA RI+ VD++  R + A
Sbjct: 168 SVGVHACRRANIG---PETN--VLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVA 222

Query: 186 KKFGVTEFV----NPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGV 241
           K+ G  E V    N +D +  V+++   M  GG+D S +C G  + M +A E    G G 
Sbjct: 223 KQLGADEIVLVSTNIEDVESEVEEIQKAM-GGGIDVSFDCVGFNKTMSTALEATRAG-GK 280

Query: 242 AVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITH 301
             LVG+ + +    T P+     R +     G ++ R+  P  +E   + +++V+  ITH
Sbjct: 281 VCLVGMGHNE---MTVPLTPAAAREVD--VVGVFRYRNTWPLCLEFLRSGKIDVKPLITH 335

Query: 302 TVPFS--EINKAFD 313
              FS  E+ +AF+
Sbjct: 336 RFGFSQKEVEEAFE 349

Length = 364

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 77.8 bits (192), Expect = 3e-16
 Identities = 67/323 (20%), Positives = 108/323 (33%), Gaps = 59/323 (18%)

Query: 6   RWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDL 65
                   P I G EA G+V +VG GVT  + GD V                        
Sbjct: 50  LAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVA----------------------- 86

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
                  G    DG                   ++EY V     +  +      ++   L
Sbjct: 87  --ALGGVG---RDG------------------GYAEYVVVPADWLVPLPDGLSFEEAAAL 123

Query: 126 SCGISTGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVDLNPSRFNE 184
                T + A  + A  K G++V + G  G VG AA + A+  GA+ +  V  +  +   
Sbjct: 124 PLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVS-SSEKLEL 182

Query: 185 AKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAV 243
            K+ G    +N ++ D    + + ++T G GVD  ++  G      S         G  V
Sbjct: 183 LKELGADHVINYREED--FVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPG--GRLV 238

Query: 244 LVGVPNKDDAFKTHPMNLLNER-TLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKF---I 299
            +G  +       + + LL +R TL+G   G+  P +         +   L   K    I
Sbjct: 239 SIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAE--ALAELFDLLASGKLKPVI 296

Query: 300 THTVPFSEINKAFDLMLAGESIR 322
               P +E   A   +L      
Sbjct: 297 DRVYPLAEAPAAAAHLLLERRTT 319

Length = 326

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 76.4 bits (188), Expect = 5e-16
 Identities = 72/274 (26%), Positives = 106/274 (38%), Gaps = 36/274 (13%)

Query: 16  IFGHEAGGIVESVGEGVTD------LQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           + GHE  G V ++  G T       L+ G  V+   T  C  C  C       CD LR  
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLR-- 58

Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCV-LSCG 128
                    G                +  ++E+     G      P    D V     C 
Sbjct: 59  -------KYGHEALDSGWPL------SGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCA 105

Query: 129 ISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF 188
            +T   A +  A   KG+ V + G G +GL AA  A  +GA+R++  D +P R   A  F
Sbjct: 106 TAT-VMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSF 164

Query: 189 GVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248
           G T    P   +   ++        GVD ++E +G+  A+ +  E +  G G AVL G  
Sbjct: 165 GATALAEP---EVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG-- 218

Query: 249 NKDDAFKTHPMNLLNERTLKG--TFFG--NYKPR 278
                F   P+ L  E+ ++   T  G  NY+PR
Sbjct: 219 ---SVFPGGPVALDPEQVVRRWLTIRGVHNYEPR 249

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 76.6 bits (189), Expect = 7e-16
 Identities = 71/314 (22%), Positives = 126/314 (40%), Gaps = 58/314 (18%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           +P I GHE  G VE VGE V   +PGD V  +       C +C S E   C         
Sbjct: 54  YPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC--------- 104

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
                  ++R    G+ +  F     F+EY    V  + K+ P    +   ++ C     
Sbjct: 105 -------KNRLGY-GEELDGF-----FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMV 151

Query: 133 FGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT 191
           +   +  A  KKG++V + G  G VG+ A + A+  GA ++I V  + S+     K+   
Sbjct: 152 YRG-LRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKYADY 209

Query: 192 EFVNPKDYDKPVQQVIADMTNGGVDRSVECTG------SVQAMISAFECVHDGWGVAVLV 245
             V  K + + V+++      GG D  +E  G      S++++           G  + +
Sbjct: 210 VIVGSK-FSEEVKKI------GGADIVIETVGTPTLEESLRSLNMG--------GKIIQI 254

Query: 246 GVPNKDDAFKTHPMNL----LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITH 301
           G  +    +    + L    L +  + G        + D+   ++  +  E +++  I  
Sbjct: 255 GNVDPSPTY---SLRLGYIILKDIEIIGHISAT---KRDVEEALK--LVAEGKIKPVIGA 306

Query: 302 TVPFSEINKAFDLM 315
            V  SEI+KA + +
Sbjct: 307 EVSLSEIDKALEEL 320

Length = 334

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 76.7 bits (189), Expect = 9e-16
 Identities = 77/330 (23%), Positives = 129/330 (39%), Gaps = 47/330 (14%)

Query: 6   RWGQTPLFPRIFGHEAGGIVESVGEGVTD--LQPGDHVLPVFTGECKECPHCHSEESNMC 63
            + + P+ P   GHE  G V  +GEG  +  ++ GD V+      C  C  C+  +  MC
Sbjct: 58  PYVKPPMIP---GHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMC 114

Query: 64  ---DLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLD 120
              DL     +    +N G + +               F +  + H     K+    P +
Sbjct: 115 QKHDLYGFQNN----VNGGMAEYMR-------------FPKEAIVH-----KVPDDIPPE 152

Query: 121 KVCV---LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL 177
              +   L+C +       V+ A  K    V + G G +GL     AR+    ++I +DL
Sbjct: 153 DAILIEPLACALHA-----VDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDL 207

Query: 178 NPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVH 236
              R   A+KFG    +NP + D   +  I ++T G G D  +E TG   A+      + 
Sbjct: 208 KDERLALARKFGADVVLNPPEVDVVEK--IKELTGGYGCDIYIEATGHPSAVEQGLNMIR 265

Query: 237 DGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVE 296
              G  V   V           +    E  + G+  G Y      P  ++   +  L  +
Sbjct: 266 K-LGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYC----YPIAIDLIASGRLPTD 320

Query: 297 KFITHTVPFSEINKAFDLMLAGE-SIRCII 325
             +TH  P  +  +AF+LM  G+ SI+ ++
Sbjct: 321 GIVTHQFPLEDFEEAFELMARGDDSIKVVL 350

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 70.4 bits (173), Expect = 3e-15
 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           P I GHE  GIVE VG GVT L+ GD V+      C +C  C     N+C   +     
Sbjct: 30 LPLILGHEGAGIVEEVGPGVTGLKVGDRVVVYPLIPCGKCAACREGRENLCPNGKF---L 86

Query: 73 GVMINDGQSRF 83
          GV ++ G + +
Sbjct: 87 GVHLDGGFAEY 97

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 72.2 bits (178), Expect = 2e-14
 Identities = 63/312 (20%), Positives = 99/312 (31%), Gaps = 75/312 (24%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
            P I GH+  G+V +VG GVT  + GD V                               
Sbjct: 59  LPLIPGHDVAGVVVAVGPGVTGFKVGDEVF------------------------------ 88

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
                 G + F+  G           ++EY V     +A        ++   L     T 
Sbjct: 89  ------GMTPFTRGG----------AYAEYVVVPADELALKPANLSFEEAAALPLAGLTA 132

Query: 133 FGATVNVAKPKKGQSVAIFG-LGAVG-----LAAAEGARVSGASRIIGVDLNPSRFNEAK 186
           + A   +   K GQ+V I G  G VG     LA A GARV   +         +  +  +
Sbjct: 133 WQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATAS-------AANADFLR 185

Query: 187 KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246
             G  E +   DY K           GGVD  ++  G  + +  +   V  G     LV 
Sbjct: 186 SLGADEVI---DYTK--GDFERAAAPGGVDAVLDTVGG-ETLARSLALVKPG---GRLVS 236

Query: 247 VPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFS 306
           +     A +         R ++  F         L  + E     +L     +    P  
Sbjct: 237 IAGPPPAEQA-----AKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRP--VVDRVFPLE 289

Query: 307 EINKAFDLMLAG 318
           +  +A + + +G
Sbjct: 290 DAAEAHERLESG 301

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 65/322 (20%), Positives = 111/322 (34%), Gaps = 57/322 (17%)

Query: 16  IFGHE-AGGIVESVGEGV-TDLQPGDHV--LPVFTGECKECPHCHSEESNMCDLLRINTD 71
           + GHE  G +V+  G G    L+ G  V  LP+                       +   
Sbjct: 66  VLGHEFCGEVVD-YGPGTERKLKVGTRVTSLPL-----------------------LLCG 101

Query: 72  RGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCV---LSCG 128
           +G     G S  +  G           ++EY +     + ++     ++   +   L+ G
Sbjct: 102 QGASCGIGLSPEAPGG-----------YAEYMLLSEALLLRVPDGLSMEDAALTEPLAVG 150

Query: 129 ISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF 188
           +       V  A+   G+   + G G +GLA     +  G   I+  D +P R   A   
Sbjct: 151 LHA-----VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAM 205

Query: 189 GVTEFVNPKDYDKPVQQVIADMTNGGVDRSV--ECTGSVQAMISAFECVHDGWGVAVLVG 246
           G    V+P                GG   +V  EC G+   +    E    G G  V+VG
Sbjct: 206 GADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVG 264

Query: 247 VPNKDDAFKTHPMNLLN-ERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPF 305
           V  + D     P   +  E TL+  F   Y P  +    ++     +++V   +T TV  
Sbjct: 265 VCMESDNI--EPALAIRKELTLQ--FSLGYTPE-EFADALDALAEGKVDVAPMVTGTVGL 319

Query: 306 SEINKAFD-LMLAGESIRCIIR 326
             +  AF+ L       + ++ 
Sbjct: 320 DGVPDAFEALRDPEHHCKILVD 341

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 66.4 bits (162), Expect = 3e-12
 Identities = 64/214 (29%), Positives = 92/214 (42%), Gaps = 20/214 (9%)

Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR--- 72
           + GHE  G V   G  V  ++ GD V   F   C  C +C    + +C  L +N  R   
Sbjct: 64  VLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVC--LNVNPARAGA 121

Query: 73  --GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVG-CVAKINPAAPLDKVCVLSCGI 129
             G +   G     + G+  Y  V  + F+          + KI      D    LS   
Sbjct: 122 AYGYVDMGGW----VGGQSEYVMVPYADFNLLKFPDRDQALEKI-----RDLTM-LSDIF 171

Query: 130 STGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189
            TG+   V  A    G +V I G G VGLAAA  A++ GA+ +I  DLNP+R  +A+ FG
Sbjct: 172 PTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFG 230

Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG 223
             E V+        +Q+   +    VD +V+C G
Sbjct: 231 C-ETVDLSKDATLPEQIEQILGEPEVDCAVDCVG 263

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 63.8 bits (155), Expect = 2e-11
 Identities = 76/319 (23%), Positives = 126/319 (39%), Gaps = 33/319 (10%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
           P   GHE  G V   G G         ++P     C EC  C +    +C        + 
Sbjct: 54  PLALGHEISGRVIQAGAGAASWIGKAVIVPAVI-PCGECELCKTGRGTIC------RAQK 106

Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGF 133
           +  ND Q  F+       H V  +      +  V          PL+ V V++  ++T +
Sbjct: 107 MPGNDMQGGFA------SHIVVPAKG----LCVVDEARLAAAGLPLEHVSVVADAVTTPY 156

Query: 134 GATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF 193
            A V  A  KKG  V + G G VG    + A+  GA+ ++ +D++P +    K FG    
Sbjct: 157 QAAVQ-AGLKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLT 214

Query: 194 VNPKDYD-KPVQQVIADMTNGGVDRS-----VECTGSVQAMISAFECVHDGWGVAVLVGV 247
           +NPKD   + V+++I         RS      EC+GS     SA   +  G G  V+VG 
Sbjct: 215 LNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGY 273

Query: 248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDL-PSVVEKYMNKELEVEKFITHTVPFS 306
                 ++   +   + R L     GN+    D  P+ ++  ++ ++++  F+    P  
Sbjct: 274 TMAKTEYRLSNLMAFHARAL-----GNWGCPPDRYPAALDLVLDGKIQLGPFV-ERRPLD 327

Query: 307 EINKAFDLMLAGESIRCII 325
           +I   F      +  R  I
Sbjct: 328 QIEHVFAAAHHHKLKRRAI 346

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 70/328 (21%), Positives = 125/328 (38%), Gaps = 77/328 (23%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTD 71
           +PR+ GHE  G +++VGEGV+  + GD V +    G C  C  C   +   C+  ++   
Sbjct: 54  YPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT-- 111

Query: 72  RGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINP------AAPLDKVCVL 125
            GV                    G   ++EY +     +A+I        AAPL     L
Sbjct: 112 -GV-----------------TRDG--GYAEYMLAPAEALARIPDDLDAAEAAPL-----L 146

Query: 126 SCGISTGFGATVNVAKPKKGQSVAIFGLG-----AVGLAAAEGARVSGASRIIGVDLNPS 180
             G++T F A  N +  K G  VA+ G+G     AV  AA  G R    SR         
Sbjct: 147 CAGVTT-FNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISR------GSD 198

Query: 181 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWG 240
           + + A+K G   +++    D   + +      GG    +    + +A+ +    +    G
Sbjct: 199 KADLARKLGAHHYIDTSKED-VAEALQE---LGGAKLILATAPNAKAISALVGGLAPR-G 253

Query: 241 VAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFG---------NYKPRSDLPSVVEKYMNK 291
             +++G   +  A       ++  +++ G   G          +     +  +VE +   
Sbjct: 254 KLLILGAAGEPVAVSP-LQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVETF--- 309

Query: 292 ELEVEKFITHTVPFSEINKAFDLMLAGE 319
                       P  + N+A+D M++G+
Sbjct: 310 ------------PLEKANEAYDRMMSGK 325

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 59.9 bits (146), Expect = 3e-10
 Identities = 51/219 (23%), Positives = 76/219 (34%), Gaps = 61/219 (27%)

Query: 6   RWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVL--PVFTGECKECPHCHSEESNMC 63
            + + P  P   G+EA G+VE+VG GVT    GD V   P                    
Sbjct: 50  AYIEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAA------------------ 91

Query: 64  DLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVC 123
                +  +                         T++EY +     V K  P   L  V 
Sbjct: 92  -----DLGQY-----------------------GTYAEYALVPAAAVVK-LPDG-LSFVE 121

Query: 124 VLSCGIS--TGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS 180
             +  +   T +GA V +A  + G SV I     +VGLAA + A  +GA  +I       
Sbjct: 122 AAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSE 180

Query: 181 RFNEAKKFGVTEFVN--PKDYDKPVQQVIADMTNG-GVD 216
           + +     G    +    +D    V ++    T G GVD
Sbjct: 181 KRDALLALGAAHVIVTDEEDLVAEVLRI----TGGKGVD 215

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 59.1 bits (144), Expect = 7e-10
 Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 54/322 (16%)

Query: 6   RWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDL 65
           R+      P I   +  G V +VGEGVT  + GD V+P F                    
Sbjct: 50  RYPPPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTF-------------------- 89

Query: 66  LRINTDRGVMINDGQSR---FSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
              N   G    + ++      I G            +EY V     + +  P     + 
Sbjct: 90  -FPNWLDGPPTAEDEASALGGPIDG----------VLAEYVVLPEEGLVRA-PDHLSFEE 137

Query: 123 CV-LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSR 181
              L C   T + A   +   K G +V + G G V L A + A+ +GA R+I    +  +
Sbjct: 138 AATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEK 196

Query: 182 FNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWG 240
              AK  G    +N +      ++V+  +T G GVD  VE  G    +  + + V  G G
Sbjct: 197 LERAKALGADHVINYRTTPDWGEEVL-KLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-G 253

Query: 241 VAVLVGVPNKDDA-FKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKF- 298
           V  L+G  +  +A     P+ L    TL+G   G+   R+   +     MN+ +E  +  
Sbjct: 254 VISLIGFLSGFEAPVLLLPL-LTKGATLRGIAVGS---RAQFEA-----MNRAIEAHRIR 304

Query: 299 --ITHTVPFSEINKAFDLMLAG 318
             I    PF E  +A+  + +G
Sbjct: 305 PVIDRVFPFEEAKEAYRYLESG 326

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 57.1 bits (138), Expect = 3e-09
 Identities = 75/305 (24%), Positives = 118/305 (38%), Gaps = 32/305 (10%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTD 71
           +P + GHE  G V  VG  V+    GD V + V  G C EC  C S+    C+  RI + 
Sbjct: 63  YPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCN-KRIWSY 121

Query: 72  RGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 131
             V  +         GKP         F+   V     V KI      ++   L C   T
Sbjct: 122 NDVYTD---------GKPT-----QGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVT 167

Query: 132 GFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT 191
            +    +    + G    I GLG VG    + A+  G    +    +  R    +  G  
Sbjct: 168 VYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGAD 227

Query: 192 EFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251
           +++   D  +   Q  AD  +  +D +V     ++  +S  +      G  +L+GV N  
Sbjct: 228 DYLVSSDAAE--MQEAADSLDYIID-TVPVFHPLEPYLSLLKLD----GKLILMGVINTP 280

Query: 252 DAFKTHPMNLLNERTLKGTFFGNYKPRSD-LPSVVEKYMNKELEVEKFITHTVPFSEINK 310
             F T PM +L  + + G+F G+ K   + L    EK +   +EV       V    +N 
Sbjct: 281 LQFVT-PMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTSMIEV-------VKMDYVNT 332

Query: 311 AFDLM 315
           AF+ +
Sbjct: 333 AFERL 337

Length = 357

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 55.7 bits (135), Expect = 8e-09
 Identities = 69/320 (21%), Positives = 98/320 (30%), Gaps = 80/320 (25%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP I G +  G V +VG GVT  + GD V                               
Sbjct: 58  FPPIPGMDFAGEVVAVGSGVTRFKVGDEVF------------------------------ 87

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPA--APLDKVCVLSCGIS 130
           G +   G               G    +EY V     +AK  P   +  +   +   G+ 
Sbjct: 88  GRLPPKGG--------------GA--LAEYVVAPESGLAKK-PEGVSFEEAAALPVAGL- 129

Query: 131 TGFGATVNVAKPKKGQSVAIFGL-GAVG-----LAAAEGARVSGASRIIGVDLNPSRFNE 184
           T   A  +  K K GQ V I G  G VG     +A A GA V+G       +L       
Sbjct: 130 TALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCSTRNAEL------- 182

Query: 185 AKKFGVTEFVNPKDYDKPVQQVIADMTNGGV-DRSVECTGSVQAMISAFECVHDGW--GV 241
            +  G  E +   DY    +  +A    G   D   +  G+     S +         G 
Sbjct: 183 VRSLGADEVI---DYTT--EDFVALTAGGEKYDVIFDAVGNSPF--SLYRASLALKPGGR 235

Query: 242 AVLVGVPNKDDAFKT---HPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKF 298
            V VG                     R LK  FF       DL  + E     +L+    
Sbjct: 236 YVSVGGGPSGLLLVLLLLPLTLGGGGRRLK--FFLAKPNAEDLEQLAELVEEGKLKP--V 291

Query: 299 ITHTVPFSEINKAFDLMLAG 318
           I    P  +  +A+  + +G
Sbjct: 292 IDSVYPLEDAPEAYRRLKSG 311

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 38/197 (19%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVL---PVFTGECKECPHCHSEESNMCDLLRINT 70
           P I G E  G+VE VG+ V  ++ GD V+    VF G C     C S    +C     N 
Sbjct: 55  PHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDM---CLSGNEMLCR----NG 107

Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
               ++++G                   ++EY V     + KI  +   +    L     
Sbjct: 108 GIIGVVSNG------------------GYAEYIVVPEKNLFKIPDSISDELAASLPVAAL 149

Query: 131 TGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189
           T + A +  A    G++V +FG  G  G+ A + A++ GA  +I V    SR +  K+FG
Sbjct: 150 TAYHA-LKTAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAV----SRKDWLKEFG 203

Query: 190 VTEFVNPKDYDKPVQQV 206
             E V   DYD+  ++V
Sbjct: 204 ADEVV---DYDEVEEKV 217

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 53/196 (27%), Positives = 75/196 (38%), Gaps = 37/196 (18%)

Query: 8   GQTPL--FPRIFGHEAGGIVESVGEGVTDLQPGDHVL--PVFTGECKECPHCHSEESNMC 63
           G  P   +PR+ GHE  G++++VGEGV   + G+ V   PV +  C  C  C   + N+C
Sbjct: 46  GHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVIS--CGHCYPCSIGKPNVC 103

Query: 64  DLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVC 123
             L +    GV  + G                   FSEY V       +I  A   D+  
Sbjct: 104 TSLVV---LGVHRDGG-------------------FSEYAVVPAKNAHRIPDAIA-DQYA 140

Query: 124 VLSCGISTGFGATVNV---AKPKKGQSVAIFGLGAVGLAAAEG-ARVSGASRIIGVDLNP 179
           V    +   F    NV     P +     I+G G VGL   +    V     +I  D   
Sbjct: 141 V----MVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRID 196

Query: 180 SRFNEAKKFGVTEFVN 195
            R   AK+ G    +N
Sbjct: 197 ERLALAKESGADWVIN 212

Length = 339

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 85/335 (25%), Positives = 124/335 (37%), Gaps = 77/335 (22%)

Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVM 75
           + GHEA G+VE VG+G + L PGD V+P       +C +C     + C+     T+RG  
Sbjct: 60  VLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEY-TERG-- 115

Query: 76  INDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGA 135
                    IKG   +         EY V     + K+ P+  L  V VL   +S     
Sbjct: 116 ---------IKGLHGF-------MREYFVDDPEYLVKVPPS--LADVGVLLEPLS----- 152

Query: 136 TVNVAK----------------PKKGQSVAIFGLGAVGLAAA-----EGARVSGASRIIG 174
              V K                P++     + G G +GL AA      G  V   +R   
Sbjct: 153 --VVEKAIEQAEAVQKRLPTWNPRR---ALVLGAGPIGLLAALLLRLRGFEVYVLNR--- 204

Query: 175 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFEC 234
            D    + +  ++ G T +VN      PV +V      G  D  +E TG       A   
Sbjct: 205 RDPPDPKADIVEELGAT-YVNSS--KTPVAEVKLV---GEFDLIIEATGVPPLAFEALPA 258

Query: 235 VHDGWGVAVLVGVPNKDDAF-----KTHPMNLLNERTLKGTFFGNYKPRSDLPSVVE--- 286
           +    GV +L GVP     F     + +   +L  + L G+   N   +      VE   
Sbjct: 259 LAPN-GVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN---KRHFEQAVEDLA 314

Query: 287 --KYMNKELEVEKFITHTVPFSEINKAFDLMLAGE 319
             KY    + +E+ IT  VP  E  +A      GE
Sbjct: 315 QWKYRWPGV-LERLITRRVPLEEFAEALTEKPDGE 348

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 66/263 (25%), Positives = 104/263 (39%), Gaps = 37/263 (14%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
           P + GHE  G +       + L+ G  V    +  C  C +C S   N C          
Sbjct: 60  PMVLGHEVIGKIVHSDS--SGLKEGQTVAINPSKPCGHCKYCLSHNENQC---------- 107

Query: 74  VMINDGQSRFSIKGKPIY--HFVGTSTFSEY-TVTHVGCVAKINPAAPLDKVCVLSCGIS 130
                   RF   G  +Y  H  G   F+ Y  V    C+    P    +KV   +  ++
Sbjct: 108 -----TTMRFF--GSAMYFPHVDGG--FTRYKVVDTAQCIPY--PEKADEKVMAFAEPLA 156

Query: 131 TGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV 190
               A  + A   +G+ V + G+G +G       +  GA+ I+  D++P   + A++ G 
Sbjct: 157 VAIHA-AHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGA 215

Query: 191 TEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250
            + VNP++ D    +       G  D S E +G   ++ +  E V    GV V VG+   
Sbjct: 216 DKLVNPQNDDLDHYK----AEKGYFDVSFEVSGHPSSINTCLE-VTRAKGVMVQVGM--- 267

Query: 251 DDAFKTHPMNLL--NERTLKGTF 271
             A    PM  L   E +LKG+F
Sbjct: 268 GGAPPEFPMMTLIVKEISLKGSF 290

Length = 343

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 50/228 (21%), Positives = 75/228 (32%), Gaps = 72/228 (31%)

Query: 7   WGQTPLFPRIFGHEAG-GIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDL 65
                          G G+VE+VGEGV  L+ GD    V+                    
Sbjct: 50  AYPGLPPLPYVPGSDGAGVVEAVGEGVDGLKVGD---RVWLT------------------ 88

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
                               +G          T +EY V             P D++  L
Sbjct: 89  -------------NLGWGRRQG----------TAAEYVV------------VPADQLVPL 113

Query: 126 SCGISTGFGATVNV------------AKPKKGQSVAIFG-LGAVGLAAAEGARVSGASRI 172
             G+S   GA + +            A  K G++V + G  GAVG AA + AR +GA R+
Sbjct: 114 PDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RV 172

Query: 173 IGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE 220
           I    +       ++ G     N +  D    +++A     GVD  +E
Sbjct: 173 IATASSAEGAELVRQAGADAVFNYRAED-LADRILAATAGQGVDVIIE 219

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 47/209 (22%), Positives = 67/209 (32%), Gaps = 51/209 (24%)

Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVM 75
           I G E  G VE VG  V   + GD V+ +  G                            
Sbjct: 61  ILGLEVAGYVEDVGSDVKRFKEGDRVMALLPG---------------------------- 92

Query: 76  INDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGA 135
                                  ++EY V H G V  I      ++   +     T +  
Sbjct: 93  ---------------------GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQL 131

Query: 136 TVNVAKPKKGQSVAIF-GLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV 194
                  KKGQSV I  G   VG AAA+ A   GA+ II    +  + +  KK      +
Sbjct: 132 LKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTS-SEEKVDFCKKLAAIILI 190

Query: 195 NPKDYDKPVQQVIADMTNGGVDRSVECTG 223
              D +    +V       GV+  ++C G
Sbjct: 191 RYPDEEGFAPKVKKLTGEKGVNLVLDCVG 219

Length = 334

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 64/318 (20%), Positives = 107/318 (33%), Gaps = 76/318 (23%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           +P + G +  G+V +VG  VT  + GD V                               
Sbjct: 56  YPHVPGVDGAGVVVAVGAKVTGWKVGDRVA------------------------------ 85

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTS--TFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
                             YH       +F+EYTV     V  +  +   ++   L C   
Sbjct: 86  ------------------YHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGL 127

Query: 131 TGFGATVNVAKPKKGQSVAIFGL-GAVG-----LAAAEGARVSGASRIIGVDLNPSRFNE 184
           T + A     + + G+++ I G  G VG     LA   G RV           +   F  
Sbjct: 128 TAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-------SKRNFEY 180

Query: 185 AKKFGVTEFVNPKDY-DKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVA 242
            K  G    +   DY D+ V + I ++T G GVD  ++  G   A   A   +     + 
Sbjct: 181 VKSLGADHVI---DYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALA-PTLAFNGHLV 236

Query: 243 VLVGVP--NKDDAFKTHPMNLLNERTLKGT-FFGNYKPRSDLPSVVEKYMN--KELEVEK 297
            + G P  + D  F       ++E  L      G+     DL    E+ +      ++E 
Sbjct: 237 CIQGRPDASPDPPFTRALS--VHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEP 294

Query: 298 FITHTVPFSEINKAFDLM 315
            +   +PF ++ +A   +
Sbjct: 295 LVIEVLPFEQLPEALRAL 312

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 38/163 (23%), Positives = 54/163 (33%), Gaps = 51/163 (31%)

Query: 8   GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR 67
           G  P      G E  GIV  VG GVT L+ GD V+                         
Sbjct: 22  GLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVM------------------------- 56

Query: 68  INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSC 127
                                     +    F+ +       V KI  +   ++   L  
Sbjct: 57  -------------------------GLAPGAFATHVRVDARLVVKIPDSLSFEEAATLPV 91

Query: 128 GISTGFGATVNVAKPKKGQSVAIF-GLGAVGLAAAEGARVSGA 169
              T + A V++A+ +KG+SV I    G VG AA + A+  GA
Sbjct: 92  AYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA 134

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 49.9 bits (119), Expect = 8e-07
 Identities = 70/312 (22%), Positives = 121/312 (38%), Gaps = 39/312 (12%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           WG T  +P + GHE  GIV  +G+ V   + GD V + V  G CK C  C  +  N C  
Sbjct: 61  WGFT-RYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYC-- 117

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYT---VTHVGCVAKINPAAPLDKV 122
                           +       I H  GT  +  Y+   V     V +     PLD  
Sbjct: 118 ---------------PKMIFTYNSIGH-DGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAG 161

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF 182
             L C   T +         + G+ + + GLG +G  A +  +  G  ++  +  + ++ 
Sbjct: 162 APLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKE 220

Query: 183 NEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGV 241
           +EA  + G   F+   D +K ++  I  M     D  ++   +V A+      +    G 
Sbjct: 221 DEAINRLGADSFLVSTDPEK-MKAAIGTM-----DYIIDTVSAVHALGPLLGLLKVN-GK 273

Query: 242 AVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITH 301
            + +G+P K       P+ +L  + + G+  G  K   ++     K+ N   ++E     
Sbjct: 274 LITLGLPEKPLELPIFPL-VLGRKLVGGSDIGGIKETQEMLDFCAKH-NITADIE----- 326

Query: 302 TVPFSEINKAFD 313
            +   EIN A +
Sbjct: 327 LIRMDEINTAME 338

Length = 360

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 49.4 bits (119), Expect = 1e-06
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 13 FPRIFGHEAGGIVESVGEGVTDLQPGDHV 41
           P + G E  G+VE+VG GVT  + GD V
Sbjct: 54 LPFVLGVEGAGVVEAVGPGVTGFKVGDRV 82

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 76/327 (23%), Positives = 129/327 (39%), Gaps = 51/327 (15%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           WG +  +P I GHE  GI   VG+ VT  + GD V + V  G C+ C  C+ +  N C  
Sbjct: 55  WGFSR-YPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPK 113

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
           +       V   + +S    + +          +S+  V     V  I    P D    L
Sbjct: 114 V-------VFTYNSRSSDGTRNQ--------GGYSDVIVVDHRFVLSIPDGLPSDSGAPL 158

Query: 126 SCGISTGFGATVNVAKPKK--------GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL 177
            C       A + V  P K        G+ + + GLG +G  A +  +  G  R+  +  
Sbjct: 159 LC-------AGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISR 210

Query: 178 NPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVH 236
           +  +  EA  + G   F+   D  K  + V      G +D  ++   +  A++  F  + 
Sbjct: 211 SSEKEREAIDRLGADSFLVTTDSQKMKEAV------GTMDFIIDTVSAEHALLPLFSLLK 264

Query: 237 DGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKY-MNKELEV 295
              G  V +G+P K       P+ +L  + + G+  G  K   ++     K+ +  ++E+
Sbjct: 265 VS-GKLVALGLPEKPLDLPIFPL-VLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIEL 322

Query: 296 EKFITHTVPFSEINKAFDLMLAGESIR 322
                  +  S+IN A D  LA   +R
Sbjct: 323 -------IKMSDINSAMD-RLAKSDVR 341

Length = 375

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 47.9 bits (115), Expect = 3e-06
 Identities = 66/344 (19%), Positives = 118/344 (34%), Gaps = 109/344 (31%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
           P + G E  G+VE+VGEGVT  + GD    V                             
Sbjct: 58  PFVPGSEVAGVVEAVGEGVTGFKVGDR---VVA--------------------------- 87

Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGF 133
                                G   F+E  V     V  +      ++   L     T +
Sbjct: 88  -------------------LTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAY 128

Query: 134 GATVNVAKPKKGQSVAIFGL-GAVGLAA-----AEGARV-SGASRIIGVDLNPSRFNEAK 186
            A V  A+ + G++V + G  G VGLAA     A GARV + AS    + L       A+
Sbjct: 129 HALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL-------AR 181

Query: 187 KFGVTEFVNPKDYDKPVQQVIADMTNG-GVD---------RSVECTGSVQAMISAFECVH 236
             G    ++ +D D  +++ +  +T G GVD                S+     A+    
Sbjct: 182 ALGADHVIDYRDPD--LRERVKALTGGRGVDVVYDPVGGDVFEASLRSL-----AWG--- 231

Query: 237 DGWGVAVLVG-----VPNKDDAFKTHPMNLLNER--TLKGTFFGNYKPRSDLPSVVEKYM 289
              G  +++G     +P         P NLL  +  ++ G ++G Y      P ++   +
Sbjct: 232 ---GRLLVIGFASGEIP-------QIPANLLLLKNISVVGVYWGAY--ARREPELLRANL 279

Query: 290 NKELE------VEKFITHTVPFSEINKAFDLMLAGESI-RCIIR 326
            +  +      +   ++   P  +  +A   +   ++  + ++ 
Sbjct: 280 AELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 46.2 bits (111), Expect = 1e-05
 Identities = 36/157 (22%), Positives = 51/157 (32%), Gaps = 51/157 (32%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
             + G E  G+V  VG GVT L  GD V+ +  G                          
Sbjct: 23  EAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAPG-------------------------- 56

Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGF 133
                                    F+   VT    V  I      ++   +     T +
Sbjct: 57  ------------------------AFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAY 92

Query: 134 GATVNVAKPKKGQSVAIF-GLGAVGLAAAEGARVSGA 169
            A V++A+ + G+SV I    G VG AA + AR  GA
Sbjct: 93  YALVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGA 129

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLP 43
          TP  P + G+E  G V  VG GV  L+PGD V+P
Sbjct: 60 TPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIP 93

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 44.5 bits (106), Expect = 4e-05
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 13 FPRIFGHEAGGIVESVGEGVTDLQPGDHV 41
           P I G +  G+VE+VGEGVT  + GD V
Sbjct: 57 LPAILGCDVAGVVEAVGEGVTRFRVGDEV 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 6  RWG---QTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVL 42
          R G     P  P + G E  G VE+VGEGV D + GD V+
Sbjct: 46 RQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVM 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 49/220 (22%), Positives = 78/220 (35%), Gaps = 62/220 (28%)

Query: 2   GFDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHC-----H 56
              +R G+   +  I G +A GIV +VGEGV + + GD V+           HC     +
Sbjct: 71  AARQRRGRDEPY-HIGGSDASGIVWAVGEGVKNWKVGDEVV----------VHCSVWDGN 119

Query: 57  SEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHF-VGTSTFSEYT-VTHVGCVAK-- 112
             E    D          M +  Q         I+ +     +F+++  V     + K  
Sbjct: 120 DPERAGGD---------PMFDPSQR--------IWGYETNYGSFAQFALVQATQLMPKPK 162

Query: 113 ----INPAAPLDKVCVLSCGISTGFGATV-------NVAKPKKGQSVAIFG-LGAVGLAA 160
                  AA                GAT        N    K G +V I+G  G +G  A
Sbjct: 163 HLSWEEAAAY------------MLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMA 210

Query: 161 AEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYD 200
            + AR +GA   + V  +  +    +  G    +N +D+D
Sbjct: 211 IQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINRRDFD 249

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 14 PRIFGHEAGGIVESVGEGVTDLQPGDHV 41
          P+I G +A G+VE+VG  VT  + GD V
Sbjct: 60 PKILGWDASGVVEAVGSEVTLFKVGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 63/321 (19%), Positives = 108/321 (33%), Gaps = 76/321 (23%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FPR+ G EA G VE    G     PG  V                  + M  + R     
Sbjct: 56  FPRVLGIEAVGEVEEAPGG--TFTPGQRVA-----------------TAMGGMGR----- 91

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
                      +  G          +++EYT+     V  I+      ++  L     T 
Sbjct: 92  -----------TFDG----------SYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTA 130

Query: 133 FGATVNVAKPKKGQSVAI------FGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK 186
           +G+       + G ++ I       GL A+ LA A GA V+  +R      +P R    K
Sbjct: 131 WGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTR------SPERAALLK 184

Query: 187 KFGVTE-FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245
           + G  E  ++     + ++        GG D+ +E  G+     S    +  G G+  + 
Sbjct: 185 ELGADEVVIDDGAIAEQLRAA-----PGGFDKVLELVGTATLKDS-LRHLRPG-GIVCMT 237

Query: 246 GVPNKDDAFKT-HPMNLL---NERTLKG--TFFGNYKPRSDLPSVVEKYMNKELEVEKFI 299
           G+       +  +PM+ +      TL G  +      P  +L   V         ++   
Sbjct: 238 GLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAG-----HLDIPP 292

Query: 300 THTVPFSEINKAFDLMLAGES 320
           +    F EI +A   M +  +
Sbjct: 293 SKVFTFDEIVEAHAYMESNRA 313

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 16/40 (40%), Positives = 21/40 (52%)

Query: 8  GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG 47
          G  P  P + G+E  G+V  VG GV+ L  G  VLP+   
Sbjct: 51 GSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGE 90

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGE 48
          P +P   G EA G+V +VG  VT L  GD V+   TGE
Sbjct: 35 PPYPFTPGFEASGVVRAVGPHVTRLAVGDEVI-AGTGE 71

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 18/36 (50%), Positives = 22/36 (61%)

Query: 6  RWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV 41
           +G  P  P I G EA G+V++VGEGV  LQ G  V
Sbjct: 51 TYGYKPELPAIGGSEAVGVVDAVGEGVKGLQVGQRV 86

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|234950 PRK01390, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

 Score = 41.0 bits (97), Expect = 7e-04
 Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)

Query: 144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT 191
            G++VA+FGLG  GLA A  A V+G + +I  D NP+   +A   G+T
Sbjct: 8   AGKTVAVFGLGGSGLATAR-ALVAGGAEVIAWDDNPASRAKAAAAGIT 54

Length = 460

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 47/202 (23%), Positives = 76/202 (37%), Gaps = 27/202 (13%)

Query: 3   FDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           F +++G+  L   I G +A G+V  VG GVT  + GD V+          P     +  +
Sbjct: 67  FLRKYGKLDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPML 126

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYT-VTHVGCVAKINPAAPLDK 121
               RI    G   N G                  +F+E+  V     + K       + 
Sbjct: 127 SSEQRI---WGYETNFG------------------SFAEFALVKDYQLMPKPKHLTWEEA 165

Query: 122 VCVLSCGISTGFGATV--NVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN 178
            C    G +T +   V  N A  K G +V I+G  G +G  A + AR  G +  + V  +
Sbjct: 166 ACPGLTG-ATAYRQLVGWNPAAVKPGDNVLIWGAAGGLGSYATQLARAGGGNP-VAVVSS 223

Query: 179 PSRFNEAKKFGVTEFVNPKDYD 200
           P +    +  G    ++  D+ 
Sbjct: 224 PEKAEYCRSLGAEAVIDRNDFG 245

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|133445 cd01076, NAD_bind_1_Glu_DH, NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

 Score = 38.3 bits (90), Expect = 0.003
 Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 12/62 (19%)

Query: 130 STGFG---ATVNVAK----PKKGQSVAIFGLGAVGLAAA-----EGARVSGASRIIGVDL 177
           +TG G   AT    K       G  VAI G G VG  AA      GA+V   S   G   
Sbjct: 9   ATGRGVAYATREALKKLGIGLAGARVAIQGFGNVGSHAARFLHEAGAKVVAVSDSDGTIY 68

Query: 178 NP 179
           NP
Sbjct: 69  NP 70

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha -beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 227

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV 41
           P  P   G EA G+V  VG GV  ++ GD V
Sbjct: 54 PPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRV 85

Length = 327

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 13/98 (13%)

Query: 122 VCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS 180
           VC++   + T +      AK   GQ V I G  G VG A  E A ++GA  + G      
Sbjct: 118 VCLVLNYV-TAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTA--SE 173

Query: 181 RFNEA-KKFGVTEFV-NPKDYDKPVQQVIADMTNGGVD 216
           R + A ++ G T      KD+      + A +T GGVD
Sbjct: 174 RNHAALRELGATPIDYRTKDW------LPAMLTPGGVD 205

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	329
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.98
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.98
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.97
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.97
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.97
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.97
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.97
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.97
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.97
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.97
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.97
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.97
PTZ00354	334	alcohol dehydrogenase; Provisional	99.97
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.96
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.96
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.96
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.96
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.96
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.96
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.96
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.96
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.96
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.96
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.95
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.95
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.95
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.95
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.95
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.95
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.95
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.95
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.94
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.94
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.94
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.94
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.94
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.94
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.93
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.73
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.71
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.39
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.3
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.15
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.67
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.46
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.21
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.14
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.09
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.04
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.0
PLN02494	477	adenosylhomocysteinase	97.94
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.89
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.8
PRK08324	681	short chain dehydrogenase; Validated	97.79
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.71
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.7
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.64
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.58
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.52
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.47
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.33
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.28
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.21
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.21
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.17
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.16
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.15
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.04
PRK05993	277	short chain dehydrogenase; Provisional	96.96
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	96.91
PRK12742	237	oxidoreductase; Provisional	96.9
PRK06182	273	short chain dehydrogenase; Validated	96.9
PRK05693	274	short chain dehydrogenase; Provisional	96.9
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.86
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.83
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.81
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.81
COG4122	219	Predicted O-methyltransferase [General function pr	96.76
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.72
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.69
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.67
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.67
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.67
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.65
PRK04148	134	hypothetical protein; Provisional	96.64
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.64
TIGR00438	188	rrmJ cell division protein FtsJ.	96.63
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.62
PRK07326	237	short chain dehydrogenase; Provisional	96.59
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.59
PRK08017	256	oxidoreductase; Provisional	96.57
PRK06057	255	short chain dehydrogenase; Provisional	96.51
PRK14967	223	putative methyltransferase; Provisional	96.45
PRK06139	330	short chain dehydrogenase; Provisional	96.43
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.42
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.34
PRK06949	258	short chain dehydrogenase; Provisional	96.34
PRK00536	262	speE spermidine synthase; Provisional	96.32
PRK12828	239	short chain dehydrogenase; Provisional	96.32
PRK08177	225	short chain dehydrogenase; Provisional	96.3
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.29
PRK07806	248	short chain dehydrogenase; Provisional	96.29
PRK05872	296	short chain dehydrogenase; Provisional	96.28
PLN03209	576	translocon at the inner envelope of chloroplast su	96.27
PRK07814	263	short chain dehydrogenase; Provisional	96.27
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.27
PRK07060	245	short chain dehydrogenase; Provisional	96.23
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.22
PRK06953	222	short chain dehydrogenase; Provisional	96.21
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.21
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.21
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	96.21
PRK07825	273	short chain dehydrogenase; Provisional	96.17
PLN02476	278	O-methyltransferase	96.17
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.16
PRK07109	334	short chain dehydrogenase; Provisional	96.16
PRK00811	283	spermidine synthase; Provisional	96.16
PRK06841	255	short chain dehydrogenase; Provisional	96.15
PRK07402	196	precorrin-6B methylase; Provisional	96.13
PRK07831	262	short chain dehydrogenase; Provisional	96.13
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.1
PRK12829	264	short chain dehydrogenase; Provisional	96.08
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.07
PRK06180	277	short chain dehydrogenase; Provisional	96.06
PRK05867	253	short chain dehydrogenase; Provisional	96.04
PRK08339	263	short chain dehydrogenase; Provisional	96.03
PLN02780	320	ketoreductase/ oxidoreductase	96.03
PRK12939	250	short chain dehydrogenase; Provisional	96.0
PRK11207	197	tellurite resistance protein TehB; Provisional	95.99
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.99
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	95.97
PLN02366	308	spermidine synthase	95.97
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	95.97
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	95.96
PRK08628	258	short chain dehydrogenase; Provisional	95.92
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	95.89
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.85
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.84
PRK09291	257	short chain dehydrogenase; Provisional	95.79
PRK05866	293	short chain dehydrogenase; Provisional	95.79
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.78
PRK07062	265	short chain dehydrogenase; Provisional	95.77
PRK07774	250	short chain dehydrogenase; Provisional	95.77
PRK09072	263	short chain dehydrogenase; Provisional	95.76
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.74
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.73
PRK06500	249	short chain dehydrogenase; Provisional	95.72
PRK06196	315	oxidoreductase; Provisional	95.72
PRK08265	261	short chain dehydrogenase; Provisional	95.71
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.71
PRK07478	254	short chain dehydrogenase; Provisional	95.71
PRK07024	257	short chain dehydrogenase; Provisional	95.71
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.7
PRK07890	258	short chain dehydrogenase; Provisional	95.7
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.7
PRK08589	272	short chain dehydrogenase; Validated	95.69
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.69
PRK07904	253	short chain dehydrogenase; Provisional	95.68
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.68
PRK07454	241	short chain dehydrogenase; Provisional	95.67
PLN02589	247	caffeoyl-CoA O-methyltransferase	95.67
PRK06483	236	dihydromonapterin reductase; Provisional	95.64
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.62
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.59
PRK06198	260	short chain dehydrogenase; Provisional	95.58
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.58
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.57
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.57
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.56
PRK06482	276	short chain dehydrogenase; Provisional	95.53
PRK06128	300	oxidoreductase; Provisional	95.52
PRK05854	313	short chain dehydrogenase; Provisional	95.51
PRK07677	252	short chain dehydrogenase; Provisional	95.51
KOG0725	270	consensus Reductases with broad range of substrate	95.5
PRK08226	263	short chain dehydrogenase; Provisional	95.5
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	95.5
PRK06172	253	short chain dehydrogenase; Provisional	95.49
PRK04457	262	spermidine synthase; Provisional	95.48
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.47
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.45
PRK07063	260	short chain dehydrogenase; Provisional	95.45
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.45
PRK06179	270	short chain dehydrogenase; Provisional	95.45
PRK06194	287	hypothetical protein; Provisional	95.43
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.43
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.43
PRK05717	255	oxidoreductase; Validated	95.41
PRK07576	264	short chain dehydrogenase; Provisional	95.41
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.41
PRK05876	275	short chain dehydrogenase; Provisional	95.4
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	95.39
PRK08643	256	acetoin reductase; Validated	95.38
PLN02253	280	xanthoxin dehydrogenase	95.37
PRK07035	252	short chain dehydrogenase; Provisional	95.36
PRK06138	252	short chain dehydrogenase; Provisional	95.35
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.34
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.34
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.33
PRK08703	239	short chain dehydrogenase; Provisional	95.33
PRK07856	252	short chain dehydrogenase; Provisional	95.31
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.31
PRK09186	256	flagellin modification protein A; Provisional	95.28
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.28
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.26
PRK08267	260	short chain dehydrogenase; Provisional	95.26
PRK07067	257	sorbitol dehydrogenase; Provisional	95.24
PRK08300	302	acetaldehyde dehydrogenase; Validated	95.23
PRK06181	263	short chain dehydrogenase; Provisional	95.23
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.22
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	95.19
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.19
PRK06914	280	short chain dehydrogenase; Provisional	95.18
PRK08317	241	hypothetical protein; Provisional	95.18
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.17
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	95.16
PRK06114	254	short chain dehydrogenase; Provisional	95.15
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.15
PRK06398	258	aldose dehydrogenase; Validated	95.13
PRK08251	248	short chain dehydrogenase; Provisional	95.12
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.11
PRK08862	227	short chain dehydrogenase; Provisional	95.11
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.11
COG2910	211	Putative NADH-flavin reductase [General function p	95.11
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.09
PRK05875	276	short chain dehydrogenase; Provisional	95.09
PRK06197	306	short chain dehydrogenase; Provisional	95.08
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.08
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.07
PLN02823	336	spermine synthase	95.07
PRK07985	294	oxidoreductase; Provisional	95.07
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.06
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.06
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.05
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	95.05
PRK07832	272	short chain dehydrogenase; Provisional	95.03
PRK07074	257	short chain dehydrogenase; Provisional	95.03
PRK09242	257	tropinone reductase; Provisional	95.03
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.02
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.99
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	94.99
PRK10538	248	malonic semialdehyde reductase; Provisional	94.99
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	94.98
PRK01581	374	speE spermidine synthase; Validated	94.96
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	94.96
PRK07577	234	short chain dehydrogenase; Provisional	94.96
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	94.96
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	94.94
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	94.93
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	94.93
PRK06125	259	short chain dehydrogenase; Provisional	94.9
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.9
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	94.89
PRK08264	238	short chain dehydrogenase; Validated	94.88
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	94.86
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	94.86
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	94.84
CHL00194	317	ycf39 Ycf39; Provisional	94.83
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.82
PRK05884	223	short chain dehydrogenase; Provisional	94.82
PRK06484	520	short chain dehydrogenase; Validated	94.78
PRK06720	169	hypothetical protein; Provisional	94.78
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	94.77
PRK08618	325	ornithine cyclodeaminase; Validated	94.76
PRK08263	275	short chain dehydrogenase; Provisional	94.75
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	94.74
PRK12937	245	short chain dehydrogenase; Provisional	94.73
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.72
PLN03075	296	nicotianamine synthase; Provisional	94.72
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	94.72
PRK12938	246	acetyacetyl-CoA reductase; Provisional	94.69
PRK12367	245	short chain dehydrogenase; Provisional	94.69
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	94.69
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.69
PRK12548	289	shikimate 5-dehydrogenase; Provisional	94.69
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	94.67
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.65
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	94.63
PRK06484	520	short chain dehydrogenase; Validated	94.63
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	94.62
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	94.6
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	94.6
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	94.59
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.58
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	94.57
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.56
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	94.52
PRK12743	256	oxidoreductase; Provisional	94.5
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	94.49
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	94.49
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.47
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	94.44
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	94.41
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.37
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	94.37
PRK07574	385	formate dehydrogenase; Provisional	94.36
PRK08303	305	short chain dehydrogenase; Provisional	94.34
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.33
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	94.32
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.3
PRK06523	260	short chain dehydrogenase; Provisional	94.29
PRK07791	286	short chain dehydrogenase; Provisional	94.28
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	94.27
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	94.27
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	94.24
PRK10669	558	putative cation:proton antiport protein; Provision	94.24
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	94.2
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	94.17
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	94.15
PRK08328	231	hypothetical protein; Provisional	94.12
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	94.12
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	94.07
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.07
PRK03562	621	glutathione-regulated potassium-efflux system prot	94.05
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.04
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.98
KOG3010	261	consensus Methyltransferase [General function pred	93.98
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	93.95
COG0569	225	TrkA K+ transport systems, NAD-binding component [	93.93
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	93.89
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	93.89
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	93.89
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	93.88
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	93.86
KOG1252	362	consensus Cystathionine beta-synthase and related	93.85
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.84
PRK05562	223	precorrin-2 dehydrogenase; Provisional	93.83
PRK06940	275	short chain dehydrogenase; Provisional	93.83
PRK06101	240	short chain dehydrogenase; Provisional	93.8
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	93.8
PLN02244	340	tocopherol O-methyltransferase	93.78
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	93.71
PLN03139	386	formate dehydrogenase; Provisional	93.68
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	93.65
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	93.64
PRK07775	274	short chain dehydrogenase; Provisional	93.63
PRK05650	270	short chain dehydrogenase; Provisional	93.63
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.62
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	93.61
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	93.61
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	93.59
PRK08278	273	short chain dehydrogenase; Provisional	93.59
PRK03659	601	glutathione-regulated potassium-efflux system prot	93.59
PRK09135	249	pteridine reductase; Provisional	93.58
PRK08223	287	hypothetical protein; Validated	93.54
TIGR02415	254	23BDH acetoin reductases. One member of this famil	93.51
PLN03013	429	cysteine synthase	93.51
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	93.49
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	93.48
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.46
PRK04266	226	fibrillarin; Provisional	93.45
PRK13255	218	thiopurine S-methyltransferase; Reviewed	93.43
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	93.43
PRK07102	243	short chain dehydrogenase; Provisional	93.43
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	93.42
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.4
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	93.34
PRK09134	258	short chain dehydrogenase; Provisional	93.3
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	93.3
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	93.29
PLN00203	519	glutamyl-tRNA reductase	93.29
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.25
PLN02233	261	ubiquinone biosynthesis methyltransferase	93.24
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	93.24
PRK07417	279	arogenate dehydrogenase; Reviewed	93.21
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.2
PRK06947	248	glucose-1-dehydrogenase; Provisional	93.19
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	93.18
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	93.16
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.13
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	93.12
PRK10258	251	biotin biosynthesis protein BioC; Provisional	93.11
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	93.11
PRK14903	431	16S rRNA methyltransferase B; Provisional	93.11
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	93.1
PRK03612	521	spermidine synthase; Provisional	93.09
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	93.08
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	93.07
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	93.06
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	93.05
PRK05855	582	short chain dehydrogenase; Validated	93.02
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	93.01
PF01564	246	Spermine_synth: Spermine/spermidine synthase; Inte	93.0
PRK06849	389	hypothetical protein; Provisional	92.97
PRK08219	227	short chain dehydrogenase; Provisional	92.97
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	92.94
PRK06701	290	short chain dehydrogenase; Provisional	92.93
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	92.92
PRK08936	261	glucose-1-dehydrogenase; Provisional	92.92
PLN02490	340	MPBQ/MSBQ methyltransferase	92.91
PRK13243	333	glyoxylate reductase; Reviewed	92.87
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	92.83
PRK12744	257	short chain dehydrogenase; Provisional	92.83
PRK14982	340	acyl-ACP reductase; Provisional	92.78
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	92.7
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	92.68
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	92.66
PLN02256	304	arogenate dehydrogenase	92.65
PRK12824	245	acetoacetyl-CoA reductase; Provisional	92.64
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	92.64
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	92.64
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	92.61
PLN02928	347	oxidoreductase family protein	92.59
PRK12935	247	acetoacetyl-CoA reductase; Provisional	92.57
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	92.46
PRK07340	304	ornithine cyclodeaminase; Validated	92.44
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	92.43
PRK10901	427	16S rRNA methyltransferase B; Provisional	92.43
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	92.39
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	92.37
PRK14902	444	16S rRNA methyltransferase B; Provisional	92.36
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	92.36

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=6e-55  Score=372.25  Aligned_cols=320  Identities=49%  Similarity=0.922  Sum_probs=297.6

Q ss_pred             cCCCCCC-CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCcccc
Q 047713            5 KRWGQTP-LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRF   83 (329)
Q Consensus         5 ~~~~~~~-~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~   83 (329)
                      .+.|..| .||.++|||.+|+|++||++|+.+++||+|+..++-+||.|.+|.+|+++.|......-+.| .+-+|.+||
T Consensus        46 ~~~G~~p~~~P~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG-~m~dGttrl  124 (366)
T COG1062          46 TLSGDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKG-TMPDGTTRL  124 (366)
T ss_pred             hhcCCCCCCCceecccccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccc-cccCCceee
Confidence            3444343 69999999999999999999999999999999999999999999999999999877777777 788999999


Q ss_pred             ccCCCceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHH
Q 047713           84 SIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEG  163 (329)
Q Consensus        84 ~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~l  163 (329)
                      +.++.+.+++.+.++|+||.++++..+++++++.+++.++.+.|+..|++.+.++.+++++|++|.|+|.|++|++++|-
T Consensus       125 s~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~g  204 (366)
T COG1062         125 SGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQG  204 (366)
T ss_pred             ecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEE
Q 047713          164 ARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAV  243 (329)
Q Consensus       164 a~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv  243 (329)
                      |+..|++++++++.+++|++++++||+++++|..+.. +..+.+++++++++|.+||++|..+.++++++++.+ ||+.+
T Consensus       205 A~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v  282 (366)
T COG1062         205 AKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSV  282 (366)
T ss_pred             HHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhhh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEE
Confidence            9999999999999999999999999999999988763 488999999999999999999999999999999999 59999


Q ss_pred             EeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEE
Q 047713          244 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRC  323 (329)
Q Consensus       244 ~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kv  323 (329)
                      .+|........+.++..+....++.|+.++....+.++.++++++.+|++.+++++++.++|+||++||+.|++++..|-
T Consensus       283 ~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~  362 (366)
T COG1062         283 IIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRS  362 (366)
T ss_pred             EEecCCCCceeecChHHeeccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeE
Confidence            99987776666666666666699999999988888999999999999999999999999999999999999999999988


Q ss_pred             EEee
Q 047713          324 IIRM  327 (329)
Q Consensus       324 vv~~  327 (329)
                      ||.+
T Consensus       363 Vi~~  366 (366)
T COG1062         363 VIRF  366 (366)
T ss_pred             EecC
Confidence            8864

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.2e-54  Score=361.93  Aligned_cols=324  Identities=56%  Similarity=1.018  Sum_probs=304.4

Q ss_pred             CcCCCCCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCcccc
Q 047713            4 DKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRF   83 (329)
Q Consensus         4 ~~~~~~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~   83 (329)
                      |........||+|+|||.+|+|+.+|.+|+.|++||+|+..+...|+.|.+|+++..|.|..-+.....+.+++|+.+||
T Consensus        52 ~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF  131 (375)
T KOG0022|consen   52 WSGKDPEGLFPVILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRF  131 (375)
T ss_pred             ecCCCccccCceEecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceee
Confidence            33333344789999999999999999999999999999999999999999999999999999888888999999999999


Q ss_pred             ccCCCceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHH
Q 047713           84 SIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEG  163 (329)
Q Consensus        84 ~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~l  163 (329)
                      .-+|+++|++-+..+|+||.+++...+++|++..+++.++.+.|..+|+|.|..+.+++++|+++.|+|.|.+|+++++-
T Consensus       132 ~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~G  211 (375)
T KOG0022|consen  132 TCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMG  211 (375)
T ss_pred             eeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEE
Q 047713          164 ARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAV  243 (329)
Q Consensus       164 a~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv  243 (329)
                      |+..|++++++++.+++|++.+++||+++.+|+.+......+.+.+.+++|+|+-|||+|..+.+.+++.+...+||.-+
T Consensus       212 aka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv  291 (375)
T KOG0022|consen  212 AKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSV  291 (375)
T ss_pred             HHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEE
Confidence            99999999999999999999999999999999986554588889999999999999999999999999999999999999


Q ss_pred             EeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEE
Q 047713          244 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRC  323 (329)
Q Consensus       244 ~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kv  323 (329)
                      .+|...........+..+....++.|+.++.+..+.+++.+++.+.++++.++.++++.+||++|++||+.|.+++..|-
T Consensus       292 ~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~  371 (375)
T KOG0022|consen  292 VIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRC  371 (375)
T ss_pred             EEEecCCCcccccchhhhccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEE
Confidence            99987777777777877888999999999999999999999999999999999999999999999999999999999988


Q ss_pred             EEee
Q 047713          324 IIRM  327 (329)
Q Consensus       324 vv~~  327 (329)
                      ||.+
T Consensus       372 vl~~  375 (375)
T KOG0022|consen  372 VLWM  375 (375)
T ss_pred             EEeC
Confidence            8764

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=3.6e-53  Score=369.27  Aligned_cols=282  Identities=30%  Similarity=0.495  Sum_probs=247.6

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEee-cCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCC
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLP-VFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGK   88 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   88 (329)
                      .+.+|+|||||.+|+|+++|++|++|++||||.+ .+..+|++|++|++|+++.|++....                   
T Consensus        54 ~~~~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~-------------------  114 (339)
T COG1064          54 VPKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------------------  114 (339)
T ss_pred             CCCCCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCcccc-------------------
Confidence            3458999999999999999999999999999998 77889999999999999999986552                   


Q ss_pred             ceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           89 PIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        89 ~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                         +++.+|+|+||+++|+.++++||+++++++||++.|++.|.|++| ...+++||++|+|+|.|++|++++|+|+++|
T Consensus       115 ---gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~g  190 (339)
T COG1064         115 ---GYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMG  190 (339)
T ss_pred             ---ceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcC
Confidence               344578999999999999999999999999999999999999996 4599999999999999999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      + +|++++++++|.+.+++||++++++..+.+  ..+.+++.    +|++||+++ +..++.+++.|+++ |+++++|..
T Consensus       191 a-~Via~~~~~~K~e~a~~lGAd~~i~~~~~~--~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~  261 (339)
T COG1064         191 A-EVIAITRSEEKLELAKKLGADHVINSSDSD--ALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLP  261 (339)
T ss_pred             C-eEEEEeCChHHHHHHHHhCCcEEEEcCCch--hhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCC
Confidence            7 999999999999999999999999876443  66666554    999999998 89999999999998 999999987


Q ss_pred             CCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEe
Q 047713          249 NKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIR  326 (329)
Q Consensus       249 ~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~  326 (329)
                      ......... ..++.+++++.|+..++.   .++++++++..++++.+.  +.+.++++|+++|+++|++++. +|.||+
T Consensus       262 ~~~~~~~~~~~~li~~~~~i~GS~~g~~---~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~  336 (339)
T COG1064         262 GGGPIPLLPAFLLILKEISIVGSLVGTR---ADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVID  336 (339)
T ss_pred             CCcccCCCCHHHhhhcCeEEEEEecCCH---HHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEec
Confidence            422222222 335679999999998886   789999999999987543  4379999999999999999986 599887


Q ss_pred             eC
Q 047713          327 MD  328 (329)
Q Consensus       327 ~~  328 (329)
                      +.
T Consensus       337 ~~  338 (339)
T COG1064         337 MS  338 (339)
T ss_pred             CC
Confidence            64

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-49  Score=336.73  Aligned_cols=290  Identities=28%  Similarity=0.444  Sum_probs=251.4

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      +.|+++|||.+|+|+++|+.|+++++||||++.|..+|+.|+.|++||+|.|+++...--                    
T Consensus        60 k~PmvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~at--------------------  119 (354)
T KOG0024|consen   60 KKPMVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCAT--------------------  119 (354)
T ss_pred             ccccccccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccC--------------------
Confidence            469999999999999999999999999999999999999999999999999998765310                    


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                       -..+|++++|++.+++.++|+||++|++++| +..+++++++| ..++++++|.+|||+|+|+||+++...|+.+|+.+
T Consensus       120 -pp~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l~ePLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~  196 (354)
T KOG0024|consen  120 -PPVDGTLAEYYVHPADFCYKLPDNVSFEEGA-LIEPLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASD  196 (354)
T ss_pred             -CCcCCceEEEEEechHheeeCCCCCchhhcc-cccchhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCc
Confidence             1225799999999999999999999999966 56679999998 68899999999999999999999999999999999


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCC--chHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYD--KPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      |+.++..+.|++++++||++.+.+.....  ..+.+.++...+. .+|++|||+|....++.++..++.+ |++++.+..
T Consensus       197 VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g  275 (354)
T KOG0024|consen  197 VVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMG  275 (354)
T ss_pred             EEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccC
Confidence            99999999999999999999887665543  2344555555554 6999999999999999999999998 999999886


Q ss_pred             CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc--ceEEEEe
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE--SIRCIIR  326 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~--~~kvvv~  326 (329)
                      ....+++.. ....+++.+.|++-...   .++..+++++++|++.+++++++.|+++++.+||+.+..+.  ..|+++.
T Consensus       276 ~~~~~fpi~-~v~~kE~~~~g~fry~~---~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~  351 (354)
T KOG0024|consen  276 AEEIQFPII-DVALKEVDLRGSFRYCN---GDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIIT  351 (354)
T ss_pred             CCccccChh-hhhhheeeeeeeeeecc---ccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEe
Confidence            665544432 23578999999874332   58999999999999999999999999999999999988776  4599998


Q ss_pred             eCC
Q 047713          327 MDG  329 (329)
Q Consensus       327 ~~~  329 (329)
                      .++
T Consensus       352 ~~~  354 (354)
T KOG0024|consen  352 GPE  354 (354)
T ss_pred             CCC
Confidence            764

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=3.1e-46  Score=341.69  Aligned_cols=316  Identities=52%  Similarity=0.991  Sum_probs=253.1

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|++|+.|+++.|.+.......|+.. ++.-++.++|.+.
T Consensus        53 ~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~-~~~~~~~~~g~~~  131 (368)
T TIGR02818        53 GVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMP-DGTSRFSKDGQPI  131 (368)
T ss_pred             CCCCeeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCccccccccccc-CCccccccCCCcc
Confidence            357899999999999999999999999999999989999999999999999998744322222211 1111222333333


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                      ++....|+|+||+.+|++.++++|+++++++++++++++.|||+++....++++|++|||+|+|++|++++|+|+.+|++
T Consensus       132 ~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~  211 (368)
T TIGR02818       132 YHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKAS  211 (368)
T ss_pred             cccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            33333579999999999999999999999999999999999999987888999999999999999999999999999987


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|++++.+++++++++++|++.++++.+.+.++.+.+++++++++|+|||++|.+..+..+++++++++|+++.+|....
T Consensus       212 ~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~  291 (368)
T TIGR02818       212 RIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGA  291 (368)
T ss_pred             eEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCC
Confidence            79999999999999999999999887653334667777777668999999999888899999999773399999987532


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM  327 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~  327 (329)
                      .......+..+.++..+.++..+......++.++++++.++++.++++++++|+|+|+++|++.+.+++..|++|.+
T Consensus       292 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~  368 (368)
T TIGR02818       292 GQEISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY  368 (368)
T ss_pred             CCcccccHHHHhccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence            22222222222234456666554333335688999999999988888899999999999999999888778999864

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=2.8e-46  Score=342.51  Aligned_cols=315  Identities=82%  Similarity=1.342  Sum_probs=264.4

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      .+.+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|.+|+.|+++.|.+.......|+...++.+++...|..
T Consensus        53 ~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~  132 (369)
T cd08301          53 TPLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKP  132 (369)
T ss_pred             CCCCCcccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcc
Confidence            34679999999999999999999999999999999999999999999999999997544333444444444455555555


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                      .++....|+|+||++++++.++++|+++++++++++++++.|+|.++....++++|++|||+|+|++|++++|+|+.+|+
T Consensus       133 ~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~  212 (369)
T cd08301         133 IYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGA  212 (369)
T ss_pred             eeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence            55554568999999999999999999999999999999999999987788899999999999999999999999999998


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhcc-CCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHD-GWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~-~~G~vv~~g~~  248 (329)
                      ++|+++++++++.++++++|++.+++..+.+..+.+.+++++++++|+|||++|....+..+++++++ + |+++.+|..
T Consensus       213 ~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~~g~~  291 (369)
T cd08301         213 SRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW-GVTVLLGVP  291 (369)
T ss_pred             CeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCC-CEEEEECcC
Confidence            67999999999999999999998888765322366777877766899999999987788999999998 5 899999976


Q ss_pred             CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEE
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII  325 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv  325 (329)
                      ......++.+..+.+++++.|+..+.+..+.+++++++++.++.+++.++++++|+|+|+++|++.+.+++..|++|
T Consensus       292 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~  368 (369)
T cd08301         292 HKDAVFSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL  368 (369)
T ss_pred             CCCcccccCHHHHhcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence            54323333333345788999987766655557889999999999888878899999999999999999998888886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=6.1e-46  Score=340.47  Aligned_cols=316  Identities=57%  Similarity=1.055  Sum_probs=257.2

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.|+++.|.+.... ..|++..+...++++.|.+.+
T Consensus        62 ~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~  140 (378)
T PLN02827         62 LFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVY  140 (378)
T ss_pred             CCCeeecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccc
Confidence            4689999999999999999999999999999999999999999999999999864221 112221122222223333322


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      +....|+|+||+.+|++.++++|+++++++++++++++.++|+++....++++|++|||+|+|++|++++|+|+.+|++.
T Consensus       141 ~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~  220 (378)
T PLN02827        141 HYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQ  220 (378)
T ss_pred             cccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence            23345899999999999999999999999999999888999987777788999999999999999999999999999867


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      |++++.++++.++++++|++.++++.+.+.++.+.+++++++++|+|||++|....+..+++.+++++|+++.+|.....
T Consensus       221 vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~  300 (378)
T PLN02827        221 IIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK  300 (378)
T ss_pred             EEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC
Confidence            88888899999999999999998876532247777888776689999999998778899999998833899999875443


Q ss_pred             CccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEeeC
Q 047713          252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD  328 (329)
Q Consensus       252 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~~  328 (329)
                      ..+.....++.+++++.|+....+....++.++++++.++++.+++++++.|+|+++++|++.+.+++..|+||.+.
T Consensus       301 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~  377 (378)
T PLN02827        301 PEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP  377 (378)
T ss_pred             ccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence            22222223466899999988765544457889999999999988778999999999999999999888789999875

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1e-45  Score=338.86  Aligned_cols=310  Identities=39%  Similarity=0.714  Sum_probs=253.9

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.|+++.|.+.......|..+ .+..++..++....
T Consensus        60 ~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~~  138 (371)
T cd08281          60 PLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLL-SGGRRLRLRGGEIN  138 (371)
T ss_pred             CCCccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccc-cCcccccccCcccc
Confidence            57899999999999999999999999999999888899999999999999998754322222211 11011111110001


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      +..+.|+|+||+.+|++.++++|+++++++++.+++++.|||.++....++++|++|||+|+|++|++++|+|+..|+++
T Consensus       139 ~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~  218 (371)
T cd08281         139 HHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQ  218 (371)
T ss_pred             cccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence            11123799999999999999999999999999999999999998878889999999999999999999999999999967


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      |++++.+++++++++++|++.++++.+.+  +.+.+++++++++|+|||++|.+..+..++++++++ |+++.+|.....
T Consensus       219 Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~--~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~  295 (371)
T cd08281         219 VVAVDLNEDKLALARELGATATVNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPE  295 (371)
T ss_pred             EEEEcCCHHHHHHHHHcCCceEeCCCchh--HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCC
Confidence            99999999999999999999999876654  778888887668999999999888999999999998 999999875432


Q ss_pred             Ccccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEE
Q 047713          252 DAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII  325 (329)
Q Consensus       252 ~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv  325 (329)
                      ....+.. .++.+++++.|++.+.+..++++.++++++.++++.++++++++|+|+|+++|++.+.+++..|+||
T Consensus       296 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi  370 (371)
T cd08281         296 ARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI  370 (371)
T ss_pred             ceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence            2222222 3456899999988765544467889999999999988888999999999999999999988776654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.2e-45  Score=337.99  Aligned_cols=314  Identities=58%  Similarity=1.049  Sum_probs=254.4

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++++.|++||||++.+..+|+.|++|++|+++.|.+.......|+.. ++..++..+|.+.+
T Consensus        55 ~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~-~g~~~~~~~g~~~~  133 (368)
T cd08300          55 LFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMP-DGTSRFSCKGKPIY  133 (368)
T ss_pred             CCCceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccC-CCccccccCCcccc
Confidence            67999999999999999999999999999999999999999999999999998754322222211 11122223333333


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      .....|+|+||+.++++.++++|+++++++++++++++.|||+++....++++|++|||+|+|++|++++|+|+.+|+++
T Consensus       134 ~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~  213 (368)
T cd08300         134 HFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASR  213 (368)
T ss_pred             cccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence            33345799999999999999999999999999999999999998778889999999999999999999999999999967


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      |++++.++++.++++++|++.++++.+.++++.+.+++++++++|+|||++|....+..+++++++++|+++.+|.....
T Consensus       214 vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~  293 (368)
T cd08300         214 IIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG  293 (368)
T ss_pred             EEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC
Confidence            99999999999999999999999876543347777888877789999999998778999999997733999999875322


Q ss_pred             CccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713          252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR  326 (329)
Q Consensus       252 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~  326 (329)
                      ......+..+.+...+.++..+.+...+++.++++++.++++.+.++++++|+|+|+++||+.+.+++..|++|+
T Consensus       294 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~  368 (368)
T cd08300         294 QEISTRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK  368 (368)
T ss_pred             CccccCHHHHhhcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence            122222222233456667666555545678899999999999887888999999999999999998888899874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.8e-45  Score=336.84  Aligned_cols=316  Identities=53%  Similarity=1.022  Sum_probs=253.7

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCcccccc--CCCc
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSI--KGKP   89 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~   89 (329)
                      .+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|.+|..|+++.|++.......+....++..++..  .+.+
T Consensus        64 ~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~  143 (381)
T PLN02740         64 AYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQP  143 (381)
T ss_pred             CCCccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCc
Confidence            57999999999999999999999999999999999999999999999999998854321000000000000000  0001


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                      .++....|+|+||+++|.+.++++|+++++++++.+++++.|||+++...+++++|++|||+|+|++|++++|+|+.+|+
T Consensus       144 ~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~  223 (381)
T PLN02740        144 IYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGA  223 (381)
T ss_pred             ccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCC
Confidence            11122358999999999999999999999999999999999999987788899999999999999999999999999998


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      ++|++++++++++++++++|++.+++..+.+.++.+.+++++++++|+|||++|.+..+..+++++++++|+++.+|...
T Consensus       224 ~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~  303 (381)
T PLN02740        224 SKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHP  303 (381)
T ss_pred             CcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCC
Confidence            67999999999999999999999888765333477778877766899999999988889999999987339999998754


Q ss_pred             CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM  327 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~  327 (329)
                      ....+++.+..+.++.++.|+..+.+....++.++++++.++.+.++++++++|+|+|+++|++.+.+++..|++|.+
T Consensus       304 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~  381 (381)
T PLN02740        304 TPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL  381 (381)
T ss_pred             CCceecccHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence            432233333324468899988776654445688999999999988888889999999999999999988888999864

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.3e-45  Score=310.11  Aligned_cols=289  Identities=27%  Similarity=0.440  Sum_probs=243.3

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEee-cCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLP-VFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ..+|+++|||.+|+|+++|++|++|++||||=+ ..+.+|.+|++|.+|.+++|++.-. +-+|+         -.||  
T Consensus        63 s~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~-t~~g~---------~~DG--  130 (360)
T KOG0023|consen   63 SKYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHF-TYNGV---------YHDG--  130 (360)
T ss_pred             ccCCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeE-ecccc---------ccCC--
Confidence            689999999999999999999999999999976 5556899999999999999995221 11122         1122  


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                         ....|+|++|+++++.++++||++++++.||++.|+..|.|.+| ...++.||++|-|.|+|++|.+++|+|+++|.
T Consensus       131 ---t~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~  206 (360)
T KOG0023|consen  131 ---TITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM  206 (360)
T ss_pred             ---CCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc
Confidence               33357899999999999999999999999999999999999985 56788899999999997799999999999999


Q ss_pred             CEEEEEcCCh-hhHHHHHhcCCceeeCCC-CCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          170 SRIIGVDLNP-SRFNEAKKFGVTEFVNPK-DYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       170 ~~vv~~~~~~-~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                       +|+++++++ +|.+.++.||++..++.. +.  ++.+.+...+++++|-|.+.  +...++.++.+++.+ |+++++|.
T Consensus       207 -rV~vis~~~~kkeea~~~LGAd~fv~~~~d~--d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~  280 (360)
T KOG0023|consen  207 -RVTVISTSSKKKEEAIKSLGADVFVDSTEDP--DIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGL  280 (360)
T ss_pred             -EEEEEeCCchhHHHHHHhcCcceeEEecCCH--HHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeC
Confidence             899999887 677788889999988776 44  38888888887788888766  446788999999998 99999998


Q ss_pred             CCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEe
Q 047713          248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIR  326 (329)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~  326 (329)
                      +.....++. ..+..+.+++.|+..++.   .+.+++++++.++.+...   .+..+++++++||++|++++- .|.||+
T Consensus       281 p~~~~~~~~-~~lil~~~~I~GS~vG~~---ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~yRfVvD  353 (360)
T KOG0023|consen  281 PEKPLKLDT-FPLILGRKSIKGSIVGSR---KETQEALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRYRFVVD  353 (360)
T ss_pred             cCCcccccc-hhhhcccEEEEeeccccH---HHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeEEEEEE
Confidence            776444333 334678899999999888   789999999999977543   589999999999999999985 499988


Q ss_pred             eC
Q 047713          327 MD  328 (329)
Q Consensus       327 ~~  328 (329)
                      +.
T Consensus       354 ~s  355 (360)
T KOG0023|consen  354 VS  355 (360)
T ss_pred             cc
Confidence            64

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=1.5e-44  Score=329.61  Aligned_cols=303  Identities=34%  Similarity=0.617  Sum_probs=249.9

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|+++|||++|+|+++|++|+.|++||+|++.+..+|+.|.+|+.|+++.|...... .....+-        +|....
T Consensus        53 ~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~-~~~~~~~--------~g~~~~  123 (358)
T TIGR03451        53 EFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNA-TQKMTLT--------DGTELS  123 (358)
T ss_pred             cCCcccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCcccc-ccccccc--------cCcccc
Confidence            5789999999999999999999999999999999999999999999999999752110 0000000        010000


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      .....|+|+||+.+|+..++++|+++++++++.+++++.++|.++.....+++|++|||+|+|++|++++|+|+..|+++
T Consensus       124 ~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~  203 (358)
T TIGR03451       124 PALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASK  203 (358)
T ss_pred             cccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence            00124899999999999999999999999999999999999988778888999999999999999999999999999966


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      |+++++++++.++++++|++.++++.+.+  +.+.+++++++ ++|+|||++|.+..+..++++++++ |+++.+|....
T Consensus       204 Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~--~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~  280 (358)
T TIGR03451       204 IIAVDIDDRKLEWAREFGATHTVNSSGTD--PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTP  280 (358)
T ss_pred             EEEEcCCHHHHHHHHHcCCceEEcCCCcC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCC
Confidence            99999999999999999999999876655  77888888877 8999999999878899999999998 99999997543


Q ss_pred             CCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713          251 DDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR  326 (329)
Q Consensus       251 ~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~  326 (329)
                      .....+.. ..+.++.++.+++.+.....++++++++++.++++.+.++++++|+++|+++|++.+++++..|++|.
T Consensus       281 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~  357 (358)
T TIGR03451       281 DMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE  357 (358)
T ss_pred             CceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence            22222222 34567888888765433334678889999999999888888999999999999999998887888875

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=3.4e-44  Score=325.22  Aligned_cols=286  Identities=29%  Similarity=0.462  Sum_probs=244.6

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++|+.|++||+|++.+..+|+.|++|+.|+++.|.+....  .|                  
T Consensus        53 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~--~g------------------  112 (339)
T cd08239          53 YQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAA--YG------------------  112 (339)
T ss_pred             CCCceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccc--cc------------------
Confidence            3589999999999999999999999999999999999999999999999999864321  11                  


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                       ....|+|+||+.+|++.++++|++++++++++++++++|||+++ ....+++|++|||+|+|++|++++|+|+.+|+++
T Consensus       113 -~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~  190 (339)
T cd08239         113 -WNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAED  190 (339)
T ss_pred             -cCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence             12357999999999999999999999999999999999999986 5678899999999999999999999999999955


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      |+++++++++.++++++|++.++++.+.+   .+.+.+++++ ++|+|||++|+...+..++++++++ |+++.+|....
T Consensus       191 vi~~~~~~~~~~~~~~~ga~~~i~~~~~~---~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~  266 (339)
T cd08239         191 VIGVDPSPERLELAKALGADFVINSGQDD---VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE  266 (339)
T ss_pred             EEEECCCHHHHHHHHHhCCCEEEcCCcch---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC
Confidence            99999999999999999999998875532   4556677766 8999999999877778899999998 99999987543


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM  327 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~  327 (329)
                      . .......++.+++++.|++....   ++++++++++.++.+.+.++++++|+++++++|++.++++..+|+||.+
T Consensus       267 ~-~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~  339 (339)
T cd08239         267 L-TIEVSNDLIRKQRTLIGSWYFSV---PDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF  339 (339)
T ss_pred             c-ccCcHHHHHhCCCEEEEEecCCH---HHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence            2 22222334568899998876443   5789999999999988888899999999999999999887767998864

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=1e-43  Score=324.96  Aligned_cols=313  Identities=58%  Similarity=1.049  Sum_probs=254.2

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++|+.+++||+|++.+..+|+.|.+|..|+++.|++.... ..|+. .++.+++...|...
T Consensus        53 ~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~-~~~~~~~~~~~~~~  130 (365)
T cd08277          53 TLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLM-PDGTSRFTCKGKKI  130 (365)
T ss_pred             CCCCeecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccc-cCCccccccCCccc
Confidence            46789999999999999999999999999999999999999999999999999985432 11221 11222222222222


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                      +.+...|+|+||+.++++.++++|++++++++++++++++|||+++....++++|++|||+|+|++|++++|+|+.+|++
T Consensus       131 ~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~  210 (365)
T cd08277         131 YHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGAS  210 (365)
T ss_pred             ccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            22233589999999999999999999999999999999999999877888999999999999999999999999999987


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|+++++++++.+.++++|++++++..+.+..+.+.+++++++++|+|||++|....+..+++++++.+|+++.+|....
T Consensus       211 ~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  290 (365)
T cd08277         211 RIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG  290 (365)
T ss_pred             eEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc
Confidence            79999999999999999999998887653323566777777668999999999878889999999762399999987543


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR  326 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~  326 (329)
                      . ..++....+.+++++.|++.+.+..+.+++++++++.++.+.++++++++|+|+|+++|++.+.+++..|++++
T Consensus       291 ~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~  365 (365)
T cd08277         291 A-ELSIRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT  365 (365)
T ss_pred             c-ccccCHhHHhhCCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence            2 12222222334788888887766544578999999999988888889999999999999999988887788874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=3.2e-43  Score=317.88  Aligned_cols=293  Identities=28%  Similarity=0.410  Sum_probs=238.8

Q ss_pred             CCCCc-ccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPR-IFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~-~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ..+|. ++|||++|+|+++| .++.+++||||++.|..+|+.|++|++|+++.|++...+   |..              
T Consensus        52 ~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~---g~~--------------  113 (350)
T COG1063          52 VPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFY---GYA--------------  113 (350)
T ss_pred             CCCCCcccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCcccc---ccc--------------
Confidence            34455 99999999999999 778899999999999999999999999999999954321   100              


Q ss_pred             eeeccccccccccEEeeeccEEE-cCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAK-INPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~-~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                      .+....+|+|+||+.+|.+++++ +|+++ ..+++++..++++++++.......+++.+|+|+|+|++|++++++|+..|
T Consensus       114 ~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~G  192 (350)
T COG1063         114 GLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLG  192 (350)
T ss_pred             cccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence            00111358999999999765554 58888 67778899999999886445555666669999999999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          169 ASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +++|++++.+++|++++++ .+++.+++..+.+  ....+.+.+++ ++|++|||+|.+..+..++++++++ |+++.+|
T Consensus       193 a~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~--~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vG  269 (350)
T COG1063         193 ASVVIVVDRSPERLELAKEAGGADVVVNPSEDD--AGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVG  269 (350)
T ss_pred             CceEEEeCCCHHHHHHHHHhCCCeEeecCcccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEe
Confidence            9999999999999999999 5666666554433  67778888888 9999999999999999999999998 9999999


Q ss_pred             cCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc--eEEE
Q 047713          247 VPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES--IRCI  324 (329)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~--~kvv  324 (329)
                      ..............+.|++++.|++..  ....+++.+++++.+|++.+.+++++.++++++++|++.+.+.+.  .|++
T Consensus       270 v~~~~~~~~~~~~~~~kel~l~gs~~~--~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~  347 (350)
T COG1063         270 VYGGEDIPLPAGLVVSKELTLRGSLRP--SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVV  347 (350)
T ss_pred             ccCCccCccCHHHHHhcccEEEeccCC--CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEE
Confidence            876654212223456799999998431  222679999999999999999999999999999999999987553  4888


Q ss_pred             Eee
Q 047713          325 IRM  327 (329)
Q Consensus       325 v~~  327 (329)
                      +.+
T Consensus       348 i~~  350 (350)
T COG1063         348 LKP  350 (350)
T ss_pred             ecC
Confidence            753

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-43  Score=317.88  Aligned_cols=286  Identities=21%  Similarity=0.351  Sum_probs=233.7

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +++|.++|||++|+|+++  +|++|++||||++.+..+|+.|++|+.|+++.|++....   |...              
T Consensus        57 ~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g~~~--------------  117 (343)
T PRK09880         57 IKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFF---GSAM--------------  117 (343)
T ss_pred             ccCCcccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCccee---eccc--------------
Confidence            367999999999999999  789999999999999999999999999999999874321   1100              


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                      +....+|+|+||++++++.++++|+++++++++ +..+++++|+++ ......+|++|+|+|+|++|++++|+|+.+|++
T Consensus       118 ~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~  195 (343)
T PRK09880        118 YFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAA  195 (343)
T ss_pred             ccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence            001125899999999999999999999987644 566788999986 445666899999999999999999999999997


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|++++++++++++++++|++.++++.+.+  +.+.. +. .+++|+|||++|.+..++.++++++++ |+++.+|....
T Consensus       196 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~  270 (343)
T PRK09880        196 EIVCADVSPRSLSLAREMGADKLVNPQNDD--LDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA  270 (343)
T ss_pred             EEEEEeCCHHHHHHHHHcCCcEEecCCccc--HHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC
Confidence            799999999999999999999999876644  43322 22 236999999999878899999999998 99999997543


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEee
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRM  327 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~  327 (329)
                      ...++. ...+.+++++.++...    .++++++++++.++++.+.++++++|+|+|+++|++.+.+++. +|++|.+
T Consensus       271 ~~~~~~-~~~~~k~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        271 PPEFPM-MTLIVKEISLKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             CCccCH-HHHHhCCcEEEEEeec----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            322222 2345688888887642    2579999999999999887888999999999999999988775 5988863

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=8.9e-42  Score=313.59  Aligned_cols=297  Identities=22%  Similarity=0.310  Sum_probs=228.0

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|+.|+++.|.+..... ++..++.          ...
T Consensus        60 ~~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~-~~~~~g~----------~~~  128 (393)
T TIGR02819        60 PTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPAR-AGAAYGY----------VDM  128 (393)
T ss_pred             CCCccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCC-ccceecc----------ccc
Confidence            57999999999999999999999999999999999999999999999999999743110 0000000          000


Q ss_pred             eccccccccccEEeeec--cEEEcCCCCCc----cchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHH
Q 047713           92 HFVGTSTFSEYTVTHVG--CVAKINPAAPL----DKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGAR  165 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~  165 (329)
                       ...+|+|+||+.+|+.  .++++|++++.    .+++++.++++++|+++ ...++++|++|||.|+|++|++++|+|+
T Consensus       129 -~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk  206 (393)
T TIGR02819       129 -GGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQ  206 (393)
T ss_pred             -CCCCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence             0014799999999974  69999998653    34677888899999985 4578999999999888999999999999


Q ss_pred             HcCCCEEEEEcCChhhHHHHHhcCCceeeCCC-CCCchHHHHHHhhhcC-CccEEEEecCCH--------------HHHH
Q 047713          166 VSGASRIIGVDLNPSRFNEAKKFGVTEFVNPK-DYDKPVQQVIADMTNG-GVDRSVECTGSV--------------QAMI  229 (329)
Q Consensus       166 ~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~-~~d~Vid~~g~~--------------~~~~  229 (329)
                      .+|++.+++++.++++.++++++|++. ++.. +.+  +.+.+.+++++ ++|++||++|.+              ..++
T Consensus       207 ~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~~~~~~--~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~  283 (393)
T TIGR02819       207 LLGAAVVIVGDLNPARLAQARSFGCET-VDLSKDAT--LPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLN  283 (393)
T ss_pred             HcCCceEEEeCCCHHHHHHHHHcCCeE-EecCCccc--HHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHH
Confidence            999966777778889999999999974 4433 223  66778887776 899999999975              4799


Q ss_pred             HHHHhhccCCeEEEEeccCCCCCccccc------------cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCc
Q 047713          230 SAFECVHDGWGVAVLVGVPNKDDAFKTH------------PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEK  297 (329)
Q Consensus       230 ~~~~~l~~~~G~vv~~g~~~~~~~~~~~------------~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~  297 (329)
                      .++++++++ |+++.+|...........            ...+.++.++.+..   ....+.+.++++++.++++++.+
T Consensus       284 ~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~  359 (393)
T TIGR02819       284 SLMEVTRVG-GAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAK  359 (393)
T ss_pred             HHHHHhhCC-CEEEEeeecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHH
Confidence            999999998 999999975321111110            11123445555421   11112246799999999998877


Q ss_pred             cee-eeeecccHHHHHHHHHcCcceEEEEeeC
Q 047713          298 FIT-HTVPFSEINKAFDLMLAGESIRCIIRMD  328 (329)
Q Consensus       298 ~~~-~~~~l~~i~~a~~~~~~~~~~kvvv~~~  328 (329)
                      +++ ++|+|+|+++||+.+.+++..|++|.+.
T Consensus       360 ~i~~~~~~l~~~~~a~~~~~~~~~~Kvvi~~~  391 (393)
T TIGR02819       360 AVNVTVISLDDAPEGYAEFDAGAAKKFVIDPH  391 (393)
T ss_pred             ceecceecHHHHHHHHHHHhhCCceEEEEeCC
Confidence            776 7899999999999999887789999764

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-41  Score=307.01  Aligned_cols=289  Identities=24%  Similarity=0.383  Sum_probs=238.7

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++|+.|++||+|++.+..+|+.|++|..|+++.|.+....                      
T Consensus        52 ~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~----------------------  109 (347)
T PRK10309         52 YYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFI----------------------  109 (347)
T ss_pred             CCCcccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCccee----------------------
Confidence            4689999999999999999999999999999999999999999999999999763211                      


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      +....|+|+||+.+|++.++++|+++++++++.+. ++++++++ .....+++|++|||+|+|++|++++|+|+.+|++.
T Consensus       110 g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~  187 (347)
T PRK10309        110 GSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKS  187 (347)
T ss_pred             ccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence            11235799999999999999999999999888663 45567776 46678899999999999999999999999999966


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-Ccc-EEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVD-RSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d-~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      |+++++++++.++++++|++.+++..+.+   ...+.+++.+ ++| +||||+|....+..++++++++ |+++.+|...
T Consensus       188 v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~---~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~  263 (347)
T PRK10309        188 VTAIDINSEKLALAKSLGAMQTFNSREMS---APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLH  263 (347)
T ss_pred             EEEECCCHHHHHHHHHcCCceEecCcccC---HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC
Confidence            88899999999999999999988866532   3446666665 888 9999999888999999999998 9999998754


Q ss_pred             CCCccccc--cccccccceEEEeeecCCC--CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEE
Q 047713          250 KDDAFKTH--PMNLLNERTLKGTFFGNYK--PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCI  324 (329)
Q Consensus       250 ~~~~~~~~--~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvv  324 (329)
                      .....+..  ...+.+++++.|++.+...  ..++++++++++.++.+.++++++++|+|+|+++|++.+.+++. +|+|
T Consensus       264 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvv  343 (347)
T PRK10309        264 HDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVL  343 (347)
T ss_pred             CCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEE
Confidence            43222211  1345688999997764321  13568899999999998888889999999999999999988875 5998


Q ss_pred             EeeC
Q 047713          325 IRMD  328 (329)
Q Consensus       325 v~~~  328 (329)
                      +++.
T Consensus       344 v~~~  347 (347)
T PRK10309        344 LQIP  347 (347)
T ss_pred             EeCC
Confidence            8763

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=3.6e-41  Score=306.35  Aligned_cols=285  Identities=24%  Similarity=0.434  Sum_probs=238.9

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++++.+ +||+|++.+..+|+.|.+|+.|+++.|.+....   |                 
T Consensus        51 ~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g-----------------  109 (349)
T TIGR03201        51 HALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMP---G-----------------  109 (349)
T ss_pred             CCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCcc---C-----------------
Confidence            3678999999999999999999987 999999999999999999999999999864321   1                 


Q ss_pred             eeccccccccccEEeeeccEEEcCC------CCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINP------AAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGA  164 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~------~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la  164 (329)
                        ...+|+|+||+.+|++.++++|+      ++++++++++++++.++|+++. ...+++|++|+|+|+|++|++++|+|
T Consensus       110 --~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a  186 (349)
T TIGR03201       110 --NDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTA  186 (349)
T ss_pred             --cCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHH
Confidence              11247999999999999999999      8999999999999999999864 57889999999999999999999999


Q ss_pred             HHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCC-chHHHHHHhhhcC-Ccc----EEEEecCCHHHHHHHHHhhccC
Q 047713          165 RVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYD-KPVQQVIADMTNG-GVD----RSVECTGSVQAMISAFECVHDG  238 (329)
Q Consensus       165 ~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~-~~d----~Vid~~g~~~~~~~~~~~l~~~  238 (329)
                      +.+|+ +|++++.++++.++++++|++.++++.+.+ .++.+.+++++++ ++|    +|||++|....++.++++++++
T Consensus       187 ~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~  265 (349)
T TIGR03201       187 KAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG  265 (349)
T ss_pred             HHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC
Confidence            99999 799999999999999999999988875542 2366777888876 776    8999999888888999999998


Q ss_pred             CeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcC
Q 047713          239 WGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAG  318 (329)
Q Consensus       239 ~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~  318 (329)
                       |+++.+|.......+.. ..++.++.++.|++....   ++++++++++.++++.+.++++ .|+|+++++|++.++++
T Consensus       266 -G~iv~~G~~~~~~~~~~-~~~~~~~~~~~g~~~~~~---~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~  339 (349)
T TIGR03201       266 -GTLVVVGYTMAKTEYRL-SNLMAFHARALGNWGCPP---DRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHH  339 (349)
T ss_pred             -CeEEEECcCCCCcccCH-HHHhhcccEEEEEecCCH---HHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcC
Confidence             99999997544322222 223456778888764332   5789999999999988776664 79999999999999988


Q ss_pred             cce-EEEEe
Q 047713          319 ESI-RCIIR  326 (329)
Q Consensus       319 ~~~-kvvv~  326 (329)
                      +.. |++++
T Consensus       340 ~~~~k~~~~  348 (349)
T TIGR03201       340 KLKRRAILT  348 (349)
T ss_pred             CccceEEec
Confidence            754 77764

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=6.1e-42  Score=302.04  Aligned_cols=269  Identities=26%  Similarity=0.396  Sum_probs=219.2

Q ss_pred             ccCCcceEEEEEecCCCC------cCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           16 IFGHEAGGIVESVGEGVT------DLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        16 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ++|||++|+|+++|++|+      .|++||||++.+..+|+.|++|+.|+++.|++....   |+....           
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~~-----------   66 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY---GHEALD-----------   66 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc---Cccccc-----------
Confidence            589999999999999999      899999999999999999999999999999874431   110000           


Q ss_pred             eeeccccccccccEEeeec-cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           90 IYHFVGTSTFSEYTVTHVG-CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                       .+...+|+|+||+.+|++ .++++|+++++++++++++++.|+|+++ ......+|++|||+|+|++|++++|+|+.+|
T Consensus        67 -~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G  144 (280)
T TIGR03366        67 -SGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG  144 (280)
T ss_pred             -CCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence             001135799999999997 7999999999999999999999999985 4456679999999999999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +++|++++.+++|.++++++|++.+++..+    ..+.+++++.+ ++|+|||++|.+..++.++++++++ |+++.+|.
T Consensus       145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~  219 (280)
T TIGR03366       145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS  219 (280)
T ss_pred             CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence            966888888999999999999998887643    34556666666 8999999999888899999999998 99999996


Q ss_pred             CCCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcC--CCCCCcceeeeeecccH
Q 047713          248 PNKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNK--ELEVEKFITHTVPFSEI  308 (329)
Q Consensus       248 ~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~--~l~~~~~~~~~~~l~~i  308 (329)
                      ........+. ..++.+++++.|+.....   ++++++++++.++  ++.++++++++|||+|+
T Consensus       220 ~~~~~~~~i~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       220 VFPGGPVALDPEQVVRRWLTIRGVHNYEP---RHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             CCCCCceeeCHHHHHhCCcEEEecCCCCH---HHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            4322122222 234678999998764332   5789999999874  56677888999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=3.4e-41  Score=307.30  Aligned_cols=286  Identities=20%  Similarity=0.353  Sum_probs=226.3

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .+|.++|||++|+|+++|++|+.|++||||++.+. .+|+.|++|+.|+++.|++..... .++         ..+|   
T Consensus        65 ~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~-~~~---------~~~g---  131 (360)
T PLN02586         65 RYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTY-NSI---------GHDG---  131 (360)
T ss_pred             CCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccc-ccc---------ccCC---
Confidence            56899999999999999999999999999986554 479999999999999998743210 000         0000   


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                        ...+|+|+||+++|++.++++|+++++++++++++++.|+|+++.....+++|++|||.|+|++|++++|+|+.+|+ 
T Consensus       132 --~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-  208 (360)
T PLN02586        132 --TKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-  208 (360)
T ss_pred             --CcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-
Confidence              11247999999999999999999999999999999999999987666667899999999999999999999999999 


Q ss_pred             EEEEEcCChhh-HHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSR-FNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +|++++.++++ .+.++++|++.+++..+.     +.+++.++ ++|+|||++|....++.++++++++ |+++.+|...
T Consensus       209 ~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~  281 (360)
T PLN02586        209 KVTVISSSSNKEDEAINRLGADSFLVSTDP-----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPE  281 (360)
T ss_pred             EEEEEeCCcchhhhHHHhCCCcEEEcCCCH-----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCC
Confidence            67766655544 556789999988876542     23444443 6999999999877889999999998 9999998654


Q ss_pred             CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEee
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRM  327 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~  327 (329)
                      ....++. ..++.++..+.++..+..   ++++++++++.++++++  .+ ++|+|+|+++|++.+.+++. +|+|+.+
T Consensus       282 ~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~li~~g~i~~--~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        282 KPLELPI-FPLVLGRKLVGGSDIGGI---KETQEMLDFCAKHNITA--DI-ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             CCCccCH-HHHHhCCeEEEEcCcCCH---HHHHHHHHHHHhCCCCC--cE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            3322222 223456777777665433   56899999999998864  33 58999999999999998876 5888865

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=3.5e-41  Score=300.80  Aligned_cols=263  Identities=24%  Similarity=0.370  Sum_probs=215.2

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      ++|+|+|.|++|+|+++|++|+.|++||||+... ..|                                          
T Consensus        56 ~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~-~~~------------------------------------------   92 (326)
T COG0604          56 PLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALG-GVG------------------------------------------   92 (326)
T ss_pred             CCCCcccceeEEEEEEeCCCCCCcCCCCEEEEcc-CCC------------------------------------------
Confidence            5899999999999999999999999999999763 100                                          


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                         .+|+|+||+.+|++.++++|+++|+++||++++++.|||+++....++++|++|||+|+ |++|++++|+||.+|+ 
T Consensus        93 ---~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-  168 (326)
T COG0604          93 ---RDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-  168 (326)
T ss_pred             ---CCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-
Confidence               14899999999999999999999999999999999999999999899999999999975 9999999999999998 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      .++++++++++.++++++|+++++++.+++  +.+.+++++++ ++|+|||++|. +.+..++++|+++ |+++.++...
T Consensus       169 ~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~--~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~  244 (326)
T COG0604         169 TVVAVVSSSEKLELLKELGADHVINYREED--FVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALS  244 (326)
T ss_pred             cEEEEecCHHHHHHHHhcCCCEEEcCCccc--HHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCC
Confidence            566666777777799999999999998887  99999999998 99999999976 6888899999998 9999999876


Q ss_pred             CCCccccc-cccccccceEEEeeecCC---CCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHc-Cc-ceEE
Q 047713          250 KDDAFKTH-PMNLLNERTLKGTFFGNY---KPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLA-GE-SIRC  323 (329)
Q Consensus       250 ~~~~~~~~-~~~~~~~~~~~g~~~~~~---~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~-~~-~~kv  323 (329)
                      +....... ..++.+.+...|......   ...+.+.++.+++.++.+  ++.+..+|||+|..++...... ++ .+|+
T Consensus       245 g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l--~~~i~~~~~l~e~~~a~a~~~~~~~~~GKv  322 (326)
T COG0604         245 GGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKL--KPVIDRVYPLAEAPAAAAHLLLERRTTGKV  322 (326)
T ss_pred             CCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCC--cceeccEechhhhHHHHHHHHcccCCcceE
Confidence            41111122 223446677777665433   112456778899999966  4557789999995555554332 34 4699


Q ss_pred             EEee
Q 047713          324 IIRM  327 (329)
Q Consensus       324 vv~~  327 (329)
                      ||++
T Consensus       323 vl~~  326 (326)
T COG0604         323 VLKV  326 (326)
T ss_pred             EEeC
Confidence            8864

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=4.4e-40  Score=300.94  Aligned_cols=313  Identities=49%  Similarity=0.907  Sum_probs=258.7

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++++.+++||+|++.+..+|+.|++|+.|++++|+......+.|.+ .++..+++-+|++.+
T Consensus        52 ~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~  130 (365)
T cd05279          52 PLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIH  130 (365)
T ss_pred             CCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccc
Confidence            4678999999999999999999999999999998889999999999999999876544333432 334444555666555


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      +....|+|++|+.++++.++++|+++++++++.+++++.+||+++...+.+++|++|||+|+|++|++++++|+.+|+..
T Consensus       131 ~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~  210 (365)
T cd05279         131 HFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASR  210 (365)
T ss_pred             cccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence            55566899999999999999999999999999999999999998888889999999999988999999999999999966


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhc-cCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVH-DGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~-~~~G~vv~~g~~~~  250 (329)
                      |+++++++++.+.++++|++.+++..+.+.++.+.+++++++++|+|||++|....+..++++++ ++ |+++.++....
T Consensus       211 v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~  289 (365)
T cd05279         211 IIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPS  289 (365)
T ss_pred             EEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCC
Confidence            88888899999999999999888876652237777787775689999999987788899999999 97 99999986432


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR  326 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~  326 (329)
                      .....+....+.++.++.|.+...+...+.+..+++++.++.+.+.++..++|+++++++|++.+++++..|++|.
T Consensus       290 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~  365 (365)
T cd05279         290 GTEATLDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT  365 (365)
T ss_pred             CCceeeCHHHHhcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            2222222222256777888776666555778899999999988776677899999999999999988877788773

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=5.5e-40  Score=300.82  Aligned_cols=314  Identities=51%  Similarity=0.917  Sum_probs=248.8

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++++.+++||+|++.+..+|+.|.+|+.++++.|++.......|+. .++..++-..|++..
T Consensus        59 ~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~  137 (373)
T cd08299          59 PFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIH  137 (373)
T ss_pred             CCCccccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccc
Confidence            5789999999999999999999999999999988899999999999999999875431111221 111122222233333


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      .....|+|+||++++++.++++|+++++++++.+++++.+||+++....++++|++|+|+|+|++|++++++|+..|+.+
T Consensus       138 ~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~  217 (373)
T cd08299         138 HFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASR  217 (373)
T ss_pred             cccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence            33335899999999999999999999999999999999999998888889999999999988999999999999999867


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhh-ccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECV-HDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l-~~~~G~vv~~g~~~~  250 (329)
                      |+++++++++.+.++++|++.+++..+.+.++...+++++.+++|+++|++|.+..+..++..+ +++ |+++.+|....
T Consensus       218 Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~  296 (373)
T cd08299         218 IIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPS  296 (373)
T ss_pred             EEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCC
Confidence            9999999999999999999988887653323566666666568999999998777777777655 566 99999987543


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM  327 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~  327 (329)
                      .....+.+..+.++.++.+...+.+...+++.++++.+.++.+.+++++++.|+++++++|++.+.+++..|+++.+
T Consensus       297 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~  373 (373)
T cd08299         297 SQNLSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF  373 (373)
T ss_pred             CceeecCHHHHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence            32233333234567788888776654445677788888887777777788999999999999999887777888763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.7e-40  Score=303.69  Aligned_cols=286  Identities=21%  Similarity=0.344  Sum_probs=228.0

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCC-CCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .+|.++|||++|+|+++|++|++|++||||++.+.. +|+.|++|+.|+++.|++..... .+..         ..    
T Consensus        59 ~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~~~~---------~~----  124 (375)
T PLN02178         59 RYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTY-NSRS---------SD----  124 (375)
T ss_pred             CCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccc-cccc---------cC----
Confidence            568999999999999999999999999999876665 69999999999999998743210 0000         00    


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccC-CCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAK-PKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                       +...+|+|+||+.+|++.++++|+++++++++++++++.|+|+++..... .++|++|+|.|+|++|++++|+|+.+|+
T Consensus       125 -g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga  203 (375)
T PLN02178        125 -GTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL  203 (375)
T ss_pred             -CCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC
Confidence             01124799999999999999999999999999999999999998644432 3689999999999999999999999999


Q ss_pred             CEEEEEcCCh-hhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNP-SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|++++.++ ++.+.++++|+++++++.+.     +.+++.++ ++|+|||++|.+..+..++++++++ |+++.+|..
T Consensus       204 -~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~-----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~  275 (375)
T PLN02178        204 -RVTVISRSSEKEREAIDRLGADSFLVTTDS-----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLP  275 (375)
T ss_pred             -eEEEEeCChHHhHHHHHhCCCcEEEcCcCH-----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccC
Confidence             677777654 44788899999998876541     24444443 6999999999877889999999998 999999875


Q ss_pred             CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEee
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRM  327 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~  327 (329)
                      .....++. ...+.+++++.|+..+..   +++.++++++.+|++.+.  + +.|||+|+++|++.+.+++. +|+|+.+
T Consensus       276 ~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        276 EKPLDLPI-FPLVLGRKMVGGSQIGGM---KETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             CCCCccCH-HHHHhCCeEEEEeCccCH---HHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            43322222 233567888988776543   578899999999987643  4 67999999999999998876 5988875

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=2.4e-40  Score=298.17  Aligned_cols=271  Identities=21%  Similarity=0.277  Sum_probs=225.7

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCC-CCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .+|.++|||++|+|+++|++|+.|++||+|++.+.. +|+.|.+|..|+++.|++....   |                 
T Consensus        55 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~---g-----------------  114 (329)
T TIGR02822        55 RPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYT---G-----------------  114 (329)
T ss_pred             CCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccC---C-----------------
Confidence            357999999999999999999999999999876654 7999999999999999874321   1                 


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                        ...+|+|+||+.+|+..++++|+++++++++++++++.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+ 
T Consensus       115 --~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-  190 (329)
T TIGR02822       115 --WDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-  190 (329)
T ss_pred             --cccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-
Confidence              11257999999999999999999999999999999999999986 46889999999999999999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|+++++++++.++++++|++++++..+..           .+++|+++++.+.++.+..++++++++ |+++.+|....
T Consensus       191 ~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~-----------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~  258 (329)
T TIGR02822       191 TVHVMTRGAAARRLALALGAASAGGAYDTP-----------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLT  258 (329)
T ss_pred             eEEEEeCChHHHHHHHHhCCceeccccccC-----------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCc
Confidence            799999999999999999999988753211           126899999888888999999999998 99999997433


Q ss_pred             CCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713          251 DDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII  325 (329)
Q Consensus       251 ~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv  325 (329)
                      .. ..+. ...+.+++++.++.....   +++.++++++.++++.   +++++|+|+|+++|++.+.+++.. |+||
T Consensus       259 ~~-~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       259 DT-PPLNYQRHLFYERQIRSVTSNTR---ADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             cC-CCCCHHHHhhCCcEEEEeecCCH---HHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            21 1122 223567888888764332   5678899999999774   457899999999999999988865 7765

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=6e-41  Score=273.87  Aligned_cols=268  Identities=22%  Similarity=0.242  Sum_probs=224.5

Q ss_pred             cCCCCC--CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccc
Q 047713            5 KRWGQT--PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSR   82 (329)
Q Consensus         5 ~~~~~~--~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~   82 (329)
                      -|.|.+  ++.|++||.|.+|+|+++|++|++|++||||+...                                     
T Consensus        54 ~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl~-------------------------------------   96 (336)
T KOG1197|consen   54 FRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYLN-------------------------------------   96 (336)
T ss_pred             HhccccCCCCCCcCCCcccceEEEEecCCccccccccEEEEec-------------------------------------
Confidence            455654  47899999999999999999999999999998531                                     


Q ss_pred             cccCCCceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEc-CCHHHHHHH
Q 047713           83 FSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFG-LGAVGLAAA  161 (329)
Q Consensus        83 ~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G-ag~iG~aai  161 (329)
                                  ..|.|+|++.+|...+.++|+.+++.++|++.+-+.|||..+++..++++|++||||. +|++|++++
T Consensus        97 ------------~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~  164 (336)
T KOG1197|consen   97 ------------PFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLC  164 (336)
T ss_pred             ------------cchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHH
Confidence                        2489999999999999999999999999999999999999999999999999999996 599999999


Q ss_pred             HHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCe
Q 047713          162 EGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWG  240 (329)
Q Consensus       162 ~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G  240 (329)
                      |+++..|+ +++++.++.+|.+.+++.|+++.++++.++  +.+.+.+++++ |+|+++|++|. +.+...+.+|++. |
T Consensus       165 Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~eD--~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G  239 (336)
T KOG1197|consen  165 QLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYSTED--YVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-G  239 (336)
T ss_pred             HHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccchh--HHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-c
Confidence            99999999 899999999999999999999999998877  99999999988 99999999987 7899999999998 9


Q ss_pred             EEEEeccCCCCCccccccccccccceEEEeeecCCCCC-CC----HHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHH
Q 047713          241 VAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPR-SD----LPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLM  315 (329)
Q Consensus       241 ~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~----~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~  315 (329)
                      .++.+|..++.........+--+++++.-.++-.+.+. .+    ..+++.++.++.+.+  .+.++|||+++.+|++++
T Consensus       240 ~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~--~I~~~ypls~vadA~~di  317 (336)
T KOG1197|consen  240 KMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKI--HIDHVYPLSKVADAHADI  317 (336)
T ss_pred             eEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccce--eeeeecchHHHHHHHHHH
Confidence            99999987765433222222334555433232222221 12    346777788887754  488999999999999999


Q ss_pred             HcCcce-EEEEeeC
Q 047713          316 LAGESI-RCIIRMD  328 (329)
Q Consensus       316 ~~~~~~-kvvv~~~  328 (329)
                      ++.++. |+++...
T Consensus       318 esrktvGkvlLlp~  331 (336)
T KOG1197|consen  318 ESRKTVGKVLLLPG  331 (336)
T ss_pred             HhhhccceEEEeCC
Confidence            998865 8777653

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=2.5e-39  Score=295.80  Aligned_cols=298  Identities=25%  Similarity=0.413  Sum_probs=242.8

Q ss_pred             CCCCcccCCcceEEEEEecCCCCc------CCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTD------LQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFS   84 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~------~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~   84 (329)
                      ..+|.++|||++|+|+++|++|+.      |++||+|++.+.++|+.|.+|+.++++.|.+...+   |...+.+.    
T Consensus        52 ~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~~----  124 (361)
T cd08231          52 VPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCDD----  124 (361)
T ss_pred             CCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhc---cccccccC----
Confidence            467899999999999999999986      99999999999999999999999999999875432   21111000    


Q ss_pred             cCCCceeeccccccccccEEeeec-cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHH
Q 047713           85 IKGKPIYHFVGTSTFSEYTVTHVG-CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEG  163 (329)
Q Consensus        85 ~~~~~~~~~~~~g~~a~~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~l  163 (329)
                              ....|+|+||+.++++ .++++|+++++++++.++++++|||+++......++|++|||+|+|.+|++++++
T Consensus       125 --------~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~l  196 (361)
T cd08231         125 --------PHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAA  196 (361)
T ss_pred             --------CCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHH
Confidence                    0124799999999996 7999999999999888889999999998666666799999999889999999999


Q ss_pred             HHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCC-chHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeE
Q 047713          164 ARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYD-KPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGV  241 (329)
Q Consensus       164 a~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~  241 (329)
                      |+.+|+++|+++++++++.++++++|++.+++..+.+ ..+...+++++++ ++|++||++|+...+..++++++++ |+
T Consensus       197 ak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~  275 (361)
T cd08231         197 AKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GT  275 (361)
T ss_pred             HHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CE
Confidence            9999987788888999999999999999888776533 1133567777776 8999999998877889999999998 99


Q ss_pred             EEEeccCCCCCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcC--CCCCCcceeeeeecccHHHHHHHHHcC
Q 047713          242 AVLVGVPNKDDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNK--ELEVEKFITHTVPFSEINKAFDLMLAG  318 (329)
Q Consensus       242 vv~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~--~l~~~~~~~~~~~l~~i~~a~~~~~~~  318 (329)
                      ++.+|.........+.. .++.++.++.++.....   +++.++++++.++  .+.+.++++++|+++++++|++.+.++
T Consensus       276 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~  352 (361)
T cd08231         276 YVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDP---SHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESG  352 (361)
T ss_pred             EEEEcCCCCCCccccCHHHHhhcccEEEEcccCCc---hhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcC
Confidence            99998654322222222 23567888888765333   5788899999887  556677788999999999999999888


Q ss_pred             cceEEEEee
Q 047713          319 ESIRCIIRM  327 (329)
Q Consensus       319 ~~~kvvv~~  327 (329)
                      ...|+||.+
T Consensus       353 ~~~k~vi~~  361 (361)
T cd08231         353 TALKVVIDP  361 (361)
T ss_pred             CceEEEeCC
Confidence            777998863

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=6e-39  Score=292.20  Aligned_cols=285  Identities=28%  Similarity=0.498  Sum_probs=240.8

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++|+.|++||+|++.+..+|+.|.+|..|+++.|......   |+                 
T Consensus        63 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------  122 (351)
T cd08233          63 TAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFI---GL-----------------  122 (351)
T ss_pred             CCCceecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCcee---cc-----------------
Confidence            3689999999999999999999999999999999999999999999999999853210   10                 


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                       ...+|+|+||+.++.+.++++|+++++++++.+ .++.+||+++ ...++++|++|+|+|+|.+|++++|+|+.+|+++
T Consensus       123 -~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~  199 (351)
T cd08233         123 -GGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASK  199 (351)
T ss_pred             -CCCCCceeeEEEechHHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence             001479999999999999999999999988765 6778999986 7788999999999998999999999999999977


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      |+++++++++.++++++|++.++++.+.+  +.+.+++.+++ ++|+|||++|....++.++++++++ |+++.+|....
T Consensus       200 v~~~~~~~~~~~~~~~~ga~~~i~~~~~~--~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~  276 (351)
T cd08233         200 IIVSEPSEARRELAEELGATIVLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEK  276 (351)
T ss_pred             EEEECCCHHHHHHHHHhCCCEEECCCccC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCC
Confidence            88998999999999999999999887665  88888888877 7999999998777899999999998 99999987553


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccH-HHHHHHHHcCcc--eEEEEe
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEI-NKAFDLMLAGES--IRCIIR  326 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i-~~a~~~~~~~~~--~kvvv~  326 (329)
                      ...++ ....+.+++++.+.....   .++++++++++.++.+++.++++++|+++|+ ++|++.+.+++.  +|+||.
T Consensus       277 ~~~~~-~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         277 PISFN-PNDLVLKEKTLTGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             CCccC-HHHHHhhCcEEEEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence            22222 122356788998876433   2679999999999998877778899999996 799999988874  588763

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=4.1e-39  Score=293.62  Aligned_cols=282  Identities=26%  Similarity=0.390  Sum_probs=220.0

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++ +.|++||||+..+..+|+.|.+|+.|+++.|.+.... ..|+                 
T Consensus        56 ~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~-----------------  116 (355)
T cd08230          56 EDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGI-----------------  116 (355)
T ss_pred             CCCeeeccccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCc-----------------
Confidence            46899999999999999999 9999999999998889999999999999999864321 1111                 


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhh------hccCCCCCCeEEEEcCCHHHHHHHHHHH
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATV------NVAKPKKGQSVAIFGLGAVGLAAAEGAR  165 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~------~~~~~~~g~~VlI~Gag~iG~aai~la~  165 (329)
                       ...+|+|+||+.+|++.++++|++++  +++++..++++++.++.      ...++++|++|+|+|+|++|++++|+|+
T Consensus       117 -~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak  193 (355)
T cd08230         117 -KGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLR  193 (355)
T ss_pred             -CCCCccceeEEEeccccEEECCCCCC--cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHH
Confidence             01247999999999999999999998  34555566666554432      2233678999999999999999999999


Q ss_pred             HcCCCEEEEEcC---ChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEE
Q 047713          166 VSGASRIIGVDL---NPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA  242 (329)
Q Consensus       166 ~~G~~~vv~~~~---~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~v  242 (329)
                      .+|+ +|+++++   +++++++++++|++. +++.+.+  +.+ .+  ..+++|+|||++|.+..+..++++++++ |++
T Consensus       194 ~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~--~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~  265 (355)
T cd08230         194 LRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSKTP--VAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-GVV  265 (355)
T ss_pred             HcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCccc--hhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-cEE
Confidence            9999 7888876   688999999999986 4554433  333 11  1248999999999877889999999998 999


Q ss_pred             EEeccCCCCCccccc-----cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCC----CCCcceeeeeecccHHHHHH
Q 047713          243 VLVGVPNKDDAFKTH-----PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEL----EVEKFITHTVPFSEINKAFD  313 (329)
Q Consensus       243 v~~g~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l----~~~~~~~~~~~l~~i~~a~~  313 (329)
                      +.+|.........+.     ..++.+++++.|+.....   ++++++++++.++.+    .++++++++|+++|+++|++
T Consensus       266 v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~  342 (355)
T cd08230         266 ILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANK---RHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALT  342 (355)
T ss_pred             EEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCch---hhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHH
Confidence            999976542222222     234568899999765443   678899999988762    35667899999999999999


Q ss_pred             HHHcCcceEEEEee
Q 047713          314 LMLAGESIRCIIRM  327 (329)
Q Consensus       314 ~~~~~~~~kvvv~~  327 (329)
                      .+.++. .|++|++
T Consensus       343 ~~~~~~-~K~v~~~  355 (355)
T cd08230         343 EKPDGE-IKVVIEW  355 (355)
T ss_pred             hcccCC-eEEEeeC
Confidence            886543 6998864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.2e-38  Score=288.75  Aligned_cols=287  Identities=21%  Similarity=0.331  Sum_probs=228.0

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCC-CCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .+|.++|||++|+|+++|++|+.|++||+|++.+.. +|+.|.+|++|+++.|.+.......+.          .     
T Consensus        62 ~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~----------~-----  126 (357)
T PLN02514         62 NYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY----------T-----  126 (357)
T ss_pred             CCCccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccc----------c-----
Confidence            568999999999999999999999999999876554 699999999999999986421100000          0     


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                      .+...+|+|+||+.+|...++++|+++++++++++++++.|||+++......++|++|+|+|+|++|++++|+|+.+|+ 
T Consensus       127 ~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-  205 (357)
T PLN02514        127 DGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-  205 (357)
T ss_pred             CCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-
Confidence            0111247999999999999999999999999999999999999987666666899999999889999999999999999 


Q ss_pred             EEEEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      ++++++.++++.+ .++++|++.+++..+.     ..+.+.+. ++|+|||++|....++.++++++++ |+++.+|...
T Consensus       206 ~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~  278 (357)
T PLN02514        206 HVTVISSSDKKREEALEHLGADDYLVSSDA-----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVIN  278 (357)
T ss_pred             eEEEEeCCHHHHHHHHHhcCCcEEecCCCh-----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCC
Confidence            6777777766654 4567999877765432     23444433 6999999999777899999999998 9999999764


Q ss_pred             CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEeeC
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRMD  328 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~~  328 (329)
                      ....+. ...++.++.++.|++.+..   .+++++++++.++++  ++++ ++|+|+|+++|++.+.+++. .|+|+.++
T Consensus       279 ~~~~~~-~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~g~l--~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~  351 (357)
T PLN02514        279 TPLQFV-TPMLMLGRKVITGSFIGSM---KETEEMLEFCKEKGL--TSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA  351 (357)
T ss_pred             CCCccc-HHHHhhCCcEEEEEecCCH---HHHHHHHHHHHhCCC--cCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence            332222 1234568889998876544   578999999999975  3455 58999999999999998886 49998875

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=1.9e-37  Score=283.47  Aligned_cols=310  Identities=35%  Similarity=0.637  Sum_probs=241.0

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|++++.|++||+|++.+. +|+.|.+|+.++.+.|.........|...+..+.--..+|.+.+
T Consensus        54 ~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (365)
T cd08278          54 PLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVH  132 (365)
T ss_pred             CCCcccccceeEEEEEeCCCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccc
Confidence            56889999999999999999999999999998764 89999999999999998644221111110000000000000000


Q ss_pred             -eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           92 -HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 -~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                       +....|+|++|+.+++++++++|+++++++++.+++++.+|+.++.....+++|++|||+|+|.+|++++++|+..|++
T Consensus       133 ~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~  212 (365)
T cd08278         133 GHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCT  212 (365)
T ss_pred             cccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence             0112479999999999999999999999999999999999999888888999999999998899999999999999997


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      ++++++.++++.+.++++|++.+++..+.+  +.+.+.++++.++|+|+|++|....+..++++++++ |+++.+|....
T Consensus       213 ~v~~~~~~~~k~~~~~~~g~~~~i~~~~~~--~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~  289 (365)
T cd08278         213 TIIAVDIVDSRLELAKELGATHVINPKEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPP  289 (365)
T ss_pred             eEEEEeCCHHHHHHHHHcCCcEEecCCCcC--HHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCC
Confidence            799999999999999999999888876654  777788777339999999998777889999999998 99999986532


Q ss_pred             CCccccccc-cccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713          251 DDAFKTHPM-NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR  326 (329)
Q Consensus       251 ~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~  326 (329)
                      ......... ++.++.++.++........+.++++++++.++.+.+.+++ ..|+++++++|++.+.+++..|++|+
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~  365 (365)
T cd08278         290 GAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR  365 (365)
T ss_pred             CCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence            212222222 2367788877665433333456788999999987543344 58999999999999998887898874

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=5.4e-37  Score=279.34  Aligned_cols=291  Identities=28%  Similarity=0.392  Sum_probs=236.6

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      ++|.++|||++|+|+++|++++.|++||+|++.+..+|+.|..|..|+++.|.+...    |+.+.              
T Consensus        52 ~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~----~~~~~--------------  113 (351)
T cd08285          52 RHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLG----GWKFS--------------  113 (351)
T ss_pred             CCCcccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCC----Ccccc--------------
Confidence            568999999999999999999999999999998888999999999999999986431    22110              


Q ss_pred             eccccccccccEEeeec--cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           92 HFVGTSTFSEYTVTHVG--CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                       ...+|+|+||+.++.+  .++++|+++++++++.++.++.|||++ ....++++|++|||+|+|++|++++|+|+.+|+
T Consensus       114 -~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~  191 (351)
T cd08285         114 -NFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGA  191 (351)
T ss_pred             -CCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence             1124799999999974  899999999999999999999999998 477889999999999889999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      ++|+++++++++.++++++|++.+++..+.+  +...+.+++.+ ++|++||++|....+..++++++++ |+++.++..
T Consensus       192 ~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~  268 (351)
T cd08285         192 GRIIAVGSRPNRVELAKEYGATDIVDYKNGD--VVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYY  268 (351)
T ss_pred             CeEEEEeCCHHHHHHHHHcCCceEecCCCCC--HHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEeccc
Confidence            7799999999999999999999998876655  77778777766 8999999999877889999999998 999999865


Q ss_pred             CCCCcccccc--c-cccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCc-ceeeeeecccHHHHHHHHHcCc--ceE
Q 047713          249 NKDDAFKTHP--M-NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEK-FITHTVPFSEINKAFDLMLAGE--SIR  322 (329)
Q Consensus       249 ~~~~~~~~~~--~-~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~-~~~~~~~l~~i~~a~~~~~~~~--~~k  322 (329)
                      ..........  . ...+..++.+....  ...+.++++++++.++++.+.. ...+.++++++++|++.+++++  ..|
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k  346 (351)
T cd08285         269 GEDDYLPIPREEWGVGMGHKTINGGLCP--GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIK  346 (351)
T ss_pred             CCCceeecChhhhhhhccccEEEEeecC--CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEE
Confidence            4322112111  1 11334455543321  1236788999999999887743 3445699999999999999876  369


Q ss_pred             EEEee
Q 047713          323 CIIRM  327 (329)
Q Consensus       323 vvv~~  327 (329)
                      ++|++
T Consensus       347 ~~~~~  351 (351)
T cd08285         347 PVIIF  351 (351)
T ss_pred             EEEeC
Confidence            99864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=4.2e-36  Score=274.60  Aligned_cols=309  Identities=39%  Similarity=0.724  Sum_probs=244.3

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|+++|+|++|+|+++|++++.|++||+|++.+..+|++|++|++++.+.|........ | ...++..++.-+|.+.+
T Consensus        52 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~  129 (363)
T cd08279          52 PLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILG-G-QLPDGTRRFTADGEPVG  129 (363)
T ss_pred             CCCccccccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccc-c-ccCCCcccccccCcccc
Confidence            567899999999999999999999999999999999999999999999999975321000 0 00000111111233333


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      .....|+|++|+.++++.++++|+++++++++.+++++.+||.++....++++|++|||+|+|.+|++++++|+..|+.+
T Consensus       130 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~  209 (363)
T cd08279         130 AMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASR  209 (363)
T ss_pred             ccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence            33446899999999999999999999999999999999999998888889999999999988999999999999999955


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      |+++++++++.+.++++|++++++....+  +...+++++.+ ++|++||+++....+..++++++++ |+++.++....
T Consensus       210 Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~  286 (363)
T cd08279         210 IIAVDPVPEKLELARRFGATHTVNASEDD--AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPP  286 (363)
T ss_pred             EEEEcCCHHHHHHHHHhCCeEEeCCCCcc--HHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCC
Confidence            89998999999999999998888876654  77778877755 8999999998777889999999998 99999986442


Q ss_pred             CCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEE
Q 047713          251 DDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII  325 (329)
Q Consensus       251 ~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv  325 (329)
                      ........ .+..++..+.+..++.....+.++++++++.++.+.+.+++.++|+++++++|++.+.+++..|.||
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         287 GETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             CcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            11222222 2233566666665543333467888999999998876555778999999999999999887776665

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=4.8e-36  Score=271.80  Aligned_cols=284  Identities=20%  Similarity=0.311  Sum_probs=230.4

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      ++|.++|||++|+|+++|++|+.+++||+|++.+..+|+.|.+|..++++.|.+...                      +
T Consensus        52 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~  109 (339)
T PRK10083         52 KYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVV----------------------L  109 (339)
T ss_pred             CCCcccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCce----------------------E
Confidence            568999999999999999999999999999999999999999999999999975321                      0


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHH-cCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARV-SGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~-~G~~  170 (329)
                      +...+|+|+||+.++.+.++++|+++++++++ +..++.+++. +....++++|++|+|+|+|.+|++++|+|+. +|++
T Consensus       110 ~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~  187 (339)
T PRK10083        110 GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVK  187 (339)
T ss_pred             EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCC
Confidence            11124799999999999999999999988765 5677788885 5677899999999999999999999999996 6997


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      .++++++++++.++++++|++.+++..+.+  +.+.+..  .+ ++|+|||++|.+..+..++++++++ |+++.+|...
T Consensus       188 ~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~--~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  262 (339)
T PRK10083        188 AVIVADRIDERLALAKESGADWVINNAQEP--LGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSS  262 (339)
T ss_pred             EEEEEcCCHHHHHHHHHhCCcEEecCcccc--HHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC
Confidence            788899999999999999999998876543  5555533  23 5789999999777899999999998 9999998754


Q ss_pred             CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc-c-eEEEEee
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE-S-IRCIIRM  327 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~-~-~kvvv~~  327 (329)
                      ...... ......+++++.+...    ..+.++++++++.++.+.+.+++++.|+++++++|++.++++. . .|+++.+
T Consensus       263 ~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~  337 (339)
T PRK10083        263 EPSEIV-QQGITGKELSIFSSRL----NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF  337 (339)
T ss_pred             CCceec-HHHHhhcceEEEEEec----ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence            322111 1122346666666543    2257889999999998876555779999999999999998653 3 5999987


Q ss_pred             CC
Q 047713          328 DG  329 (329)
Q Consensus       328 ~~  329 (329)
                      .+
T Consensus       338 ~~  339 (339)
T PRK10083        338 AE  339 (339)
T ss_pred             CC
Confidence            64

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=6e-37  Score=277.55  Aligned_cols=271  Identities=19%  Similarity=0.221  Sum_probs=206.1

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|+++|||++|+|+++|.+  .|++||||++.+..+|+ |..|  +..+.|.+....   |                  
T Consensus        57 ~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~---g------------------  110 (341)
T cd08237          57 KLPMALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFR---S------------------  110 (341)
T ss_pred             CCCeeccceeEEEEEeeCCC--ccCCCCEEEECCCCCch-hccc--chhccCCCccee---E------------------
Confidence            57999999999999998864  79999999998888888 4456  345667654321   1                  


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhh--ccCCCCCCeEEEEcCCHHHHHHHHHHHH-cC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVN--VAKPKKGQSVAIFGLGAVGLAAAEGARV-SG  168 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlI~Gag~iG~aai~la~~-~G  168 (329)
                       ...+|+|+||+++|+++++++|++++++++| +..+++++|+++..  ...+++|++|||+|+|++|++++|+|+. .|
T Consensus       111 -~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g  188 (341)
T cd08237         111 -SGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYP  188 (341)
T ss_pred             -ecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcC
Confidence             1124799999999999999999999998765 55688899988643  3457899999999999999999999986 66


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecC---CHHHHHHHHHhhccCCeEEEE
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTG---SVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~  244 (329)
                      ..+|++++.+++|++++++++.+..++             +...+ ++|+|||++|   .+..++.++++++++ |+++.
T Consensus       189 ~~~vi~~~~~~~k~~~a~~~~~~~~~~-------------~~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~  254 (341)
T cd08237         189 ESKLVVFGKHQEKLDLFSFADETYLID-------------DIPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGL  254 (341)
T ss_pred             CCcEEEEeCcHhHHHHHhhcCceeehh-------------hhhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEE
Confidence            558999999999999998866543221             11123 6999999999   456889999999998 99999


Q ss_pred             eccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcC---CCCCCcceeeeeeccc---HHHHHHHHHcC
Q 047713          245 VGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNK---ELEVEKFITHTVPFSE---INKAFDLMLAG  318 (329)
Q Consensus       245 ~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~---~l~~~~~~~~~~~l~~---i~~a~~~~~~~  318 (329)
                      +|.......++. ..++.+++++.|+.....   ++++++++++.++   +..+++++++.|++++   +.++++.+.++
T Consensus       255 ~G~~~~~~~~~~-~~~~~k~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~  330 (341)
T cd08237         255 MGVSEYPVPINT-RMVLEKGLTLVGSSRSTR---EDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN  330 (341)
T ss_pred             EeecCCCcccCH-HHHhhCceEEEEecccCH---HHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc
Confidence            997543322221 234578889998764322   5688999999998   3357778899999865   55555555444


Q ss_pred             cceEEEEeeC
Q 047713          319 ESIRCIIRMD  328 (329)
Q Consensus       319 ~~~kvvv~~~  328 (329)
                      ..+|+||.++
T Consensus       331 ~~gKvvi~~~  340 (341)
T cd08237         331 SWGKTVMEWE  340 (341)
T ss_pred             CcceEEEEee
Confidence            4569999875

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=5e-36  Score=272.53  Aligned_cols=290  Identities=33%  Similarity=0.470  Sum_probs=236.9

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +++|.++|+|++|+|+++|++++++++||+|++.+..+||.|.+|+.|.+..|.+.......+                 
T Consensus        52 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------  114 (347)
T cd05278          52 AKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLG-----------------  114 (347)
T ss_pred             CCCCceeccceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccc-----------------
Confidence            456899999999999999999999999999999999999999999999999998744321111                 


Q ss_pred             eeccccccccccEEeeec--cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           91 YHFVGTSTFSEYTVTHVG--CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                        ....|+|++|++++++  +++++|+++++++++++++++.|||+++ ...++++|++|||.|+|.+|++++|+|+.+|
T Consensus       115 --~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g  191 (347)
T cd05278         115 --NRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLG  191 (347)
T ss_pred             --cCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence              1124799999999997  8999999999999999999999999986 6788999999999888999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ..+++++++++++.+.++++|++.+++..+.+  +.+.++.++++ ++|++||++|....+..++++|+++ |+++.+|.
T Consensus       192 ~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~  268 (347)
T cd05278         192 AARIIAVDSNPERLDLAKEAGATDIINPKNGD--IVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGV  268 (347)
T ss_pred             CCEEEEEeCCHHHHHHHHHhCCcEEEcCCcch--HHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcC
Confidence            65788888888999999999998888876654  77778877776 8999999998767889999999998 99999985


Q ss_pred             CCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc--eEEEE
Q 047713          248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES--IRCII  325 (329)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~--~kvvv  325 (329)
                      .............+.++.++.+.....   .+.++++++++.++.+.+.+.+...|+++++++|++.+.+++.  .|+|+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv  345 (347)
T cd05278         269 YGKPDPLPLLGEWFGKNLTFKTGLVPV---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVI  345 (347)
T ss_pred             CCCCcccCccchhhhceeEEEeeccCc---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEe
Confidence            433221112222245666666543322   3568889999999987654446788999999999999887765  48776


Q ss_pred             e
Q 047713          326 R  326 (329)
Q Consensus       326 ~  326 (329)
                      +
T Consensus       346 ~  346 (347)
T cd05278         346 R  346 (347)
T ss_pred             c
Confidence            5

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=4.9e-36  Score=276.06  Aligned_cols=305  Identities=28%  Similarity=0.399  Sum_probs=237.1

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc-e
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP-I   90 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~   90 (329)
                      ++|.++|||++|+|+++|++++++++||+|++.+..+||.|.+|..++++.|++....+..-..++  ..+..+.|.. .
T Consensus        53 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  130 (386)
T cd08283          53 KKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYG--HAGAGIFGYSHL  130 (386)
T ss_pred             CCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccc--cccccccccccc
Confidence            468999999999999999999999999999999999999999999999999987543210000000  0000000000 0


Q ss_pred             eeccccccccccEEeeec--cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           91 YHFVGTSTFSEYTVTHVG--CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                      . ....|+|++|+.++++  .++++|++++++++++++++++|||+++ ....+++|++|||+|+|.+|++++++|+..|
T Consensus       131 ~-~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g  208 (386)
T cd08283         131 T-GGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLG  208 (386)
T ss_pred             c-CCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence            0 0124799999999988  8999999999999999999999999987 7788999999999988999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCC---------------------HH
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGS---------------------VQ  226 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~---------------------~~  226 (329)
                      +.++++++.++++.+++++++...++++.+.+ ++.+.+++++.+ ++|+|||++|+                     ..
T Consensus       209 ~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~-~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~  287 (386)
T cd08283         209 AERVIAIDRVPERLEMARSHLGAETINFEEVD-DVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPD  287 (386)
T ss_pred             CCEEEEEcCCHHHHHHHHHcCCcEEEcCCcch-HHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchH
Confidence            86699999999999999998544566654431 377778888777 89999999974                     34


Q ss_pred             HHHHHHHhhccCCeEEEEeccCCCCCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeec
Q 047713          227 AMISAFECVHDGWGVAVLVGVPNKDDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPF  305 (329)
Q Consensus       227 ~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l  305 (329)
                      .+..++++++++ |+++.++..... ...... ..+.++.++.+....   ..+.++++++++.++++...+++.+.|++
T Consensus       288 ~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l  362 (386)
T cd08283         288 ALREAIQAVRKG-GTVSIIGVYGGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPL  362 (386)
T ss_pred             HHHHHHHHhccC-CEEEEEcCCCCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecH
Confidence            678899999998 999999865432 122222 235677777775432   22568889999999988765556789999


Q ss_pred             ccHHHHHHHHHcCc-c-eEEEEe
Q 047713          306 SEINKAFDLMLAGE-S-IRCIIR  326 (329)
Q Consensus       306 ~~i~~a~~~~~~~~-~-~kvvv~  326 (329)
                      +++++|++.+.+++ . .|++|+
T Consensus       363 ~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         363 EDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             HHHHHHHHHHHhCCCCeEEEEec
Confidence            99999999998876 3 598885

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=4e-36  Score=278.54  Aligned_cols=279  Identities=19%  Similarity=0.232  Sum_probs=217.0

Q ss_pred             CCCcccCCcceEEEEEecCCCC-cCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           12 LFPRIFGHEAGGIVESVGEGVT-DLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .+|+++|||++|+|+++|++|+ .|++||||++.+...|+.|..|. ++             |                 
T Consensus        61 ~~p~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~-~~-------------g-----------------  109 (410)
T cd08238          61 KEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCP-GY-------------S-----------------  109 (410)
T ss_pred             CCCceeccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCC-Cc-------------c-----------------
Confidence            4789999999999999999998 69999999999988999998882 11             0                 


Q ss_pred             eeccccccccccEEeeec----cEEEcCCCCCccchhcc-c--cc--ccchhhh-----hhhccCCCCCCeEEEEc-CCH
Q 047713           91 YHFVGTSTFSEYTVTHVG----CVAKINPAAPLDKVCVL-S--CG--ISTGFGA-----TVNVAKPKKGQSVAIFG-LGA  155 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~----~~~~~p~~~~~~~aa~~-~--~~--~~ta~~~-----l~~~~~~~~g~~VlI~G-ag~  155 (329)
                        ...+|+|+||+++|++    .++++|+++++++++.+ +  ++  +.+++..     +...+++++|++|+|+| +|+
T Consensus       110 --~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~  187 (410)
T cd08238         110 --YTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGP  187 (410)
T ss_pred             --ccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCH
Confidence              1124799999999987    68999999999987743 2  21  1222222     12457889999999997 599


Q ss_pred             HHHHHHHHHHHcC--CCEEEEEcCChhhHHHHHhc--------CCc-eeeCCCCCCchHHHHHHhhhcC-CccEEEEecC
Q 047713          156 VGLAAAEGARVSG--ASRIIGVDLNPSRFNEAKKF--------GVT-EFVNPKDYDKPVQQVIADMTNG-GVDRSVECTG  223 (329)
Q Consensus       156 iG~aai~la~~~G--~~~vv~~~~~~~~~~~~~~l--------g~~-~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g  223 (329)
                      +|++++|+|+.+|  +.+|++++.+++|+++++++        |++ .++++.+. .++.+.+++++++ ++|+|||++|
T Consensus       188 vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~-~~~~~~v~~~t~g~g~D~vid~~g  266 (410)
T cd08238         188 MGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATI-DDLHATLMELTGGQGFDDVFVFVP  266 (410)
T ss_pred             HHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCcc-ccHHHHHHHHhCCCCCCEEEEcCC
Confidence            9999999999975  45799999999999999997        665 45665431 1377788888877 9999999999


Q ss_pred             CHHHHHHHHHhhccCCeEEEEeccC-CCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceee
Q 047713          224 SVQAMISAFECVHDGWGVAVLVGVP-NKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITH  301 (329)
Q Consensus       224 ~~~~~~~~~~~l~~~~G~vv~~g~~-~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~  301 (329)
                      .+..+..++++++++ |+++.++.. ......++. ..++.+++++.|+..+..   ++++++++++.++++.+.+++++
T Consensus       267 ~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~li~~g~i~~~~~it~  342 (410)
T cd08238         267 VPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGNT---DDMKEAIDLMAAGKLNPARMVTH  342 (410)
T ss_pred             CHHHHHHHHHHhccC-CeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCCH---HHHHHHHHHHHcCCCchhhcEEE
Confidence            888999999999987 887776432 211111222 234568899998765433   57899999999999988888999


Q ss_pred             eeecccHHHHHHHHHcCcceEEEEeeC
Q 047713          302 TVPFSEINKAFDLMLAGESIRCIIRMD  328 (329)
Q Consensus       302 ~~~l~~i~~a~~~~~~~~~~kvvv~~~  328 (329)
                      +|+|+++++|++.+..+..+|+||..+
T Consensus       343 ~~~l~~~~~A~~~~~~~~~gKvvl~~~  369 (410)
T cd08238         343 IGGLNAAAETTLNLPGIPGGKKLIYTQ  369 (410)
T ss_pred             EecHHHHHHHHHHhhccCCceEEEECC
Confidence            999999999999998433469988763

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=9.4e-36  Score=269.23  Aligned_cols=278  Identities=22%  Similarity=0.429  Sum_probs=230.5

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecC-CCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVF-TGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ++|.++|||++|+|+++|+++++|++||+|++.+ ...|+.|.+|..|+++.|......   |                 
T Consensus        53 ~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~---~-----------------  112 (333)
T cd08296          53 SYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT---G-----------------  112 (333)
T ss_pred             CCCcccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCcc---C-----------------
Confidence            5688999999999999999999999999999855 457999999999999999864321   1                 


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                        +...|++++|+.++.+.++++|+++++++++.+++++.++|+++.. .+++++++|||+|+|.+|++++++|+.+|+ 
T Consensus       113 --~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-  188 (333)
T cd08296         113 --VTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-  188 (333)
T ss_pred             --cccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-
Confidence              1124799999999999999999999999999999999999998644 589999999999999999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|++++.++++.+.++++|++.+++..+.+  +.+.+++.  +++|+++|++|.+..+..++++++++ |+++.+|....
T Consensus       189 ~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~  263 (333)
T cd08296         189 RTVAISRGSDKADLARKLGAHHYIDTSKED--VAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAGE  263 (333)
T ss_pred             eEEEEeCChHHHHHHHHcCCcEEecCCCcc--HHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCCC
Confidence            789998999999999999999888876554  66666655  36999999998778899999999998 99999987553


Q ss_pred             CCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEe
Q 047713          251 DDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIR  326 (329)
Q Consensus       251 ~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~  326 (329)
                      .  .++. ..++.++.++.+...+..   .+++.+++++.++.+.  +++ +.|+++++.+|++.+.+++. +|+|++
T Consensus       264 ~--~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~l~--~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         264 P--VAVSPLQLIMGRKSIHGWPSGTA---LDSEDTLKFSALHGVR--PMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             C--CCcCHHHHhhcccEEEEeCcCCH---HHHHHHHHHHHhCCCC--ceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            2  2222 223478889988764332   4678888888877654  344 68999999999999998876 588764

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.8e-35  Score=269.24  Aligned_cols=285  Identities=25%  Similarity=0.392  Sum_probs=232.6

Q ss_pred             CCCcccCCcceEEEEEecCCCC--cCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           12 LFPRIFGHEAGGIVESVGEGVT--DLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~--~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ++|.++|+|++|+|+++|++|+  .|++||+|++.+..+|+.|..|+.|.++.|.....   .|+.              
T Consensus        61 ~~p~~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~--------------  123 (350)
T cd08256          61 KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQ--------------  123 (350)
T ss_pred             CCCcccCcceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeec--------------
Confidence            4688999999999999999999  89999999999999999999999999999975321   1110              


Q ss_pred             eeeccccccccccEEeeec-cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           90 IYHFVGTSTFSEYTVTHVG-CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                         ....|+|++|+.++++ .++++|+++++++++.+ .+++++|.++ ...++++|++|+|.|+|.+|++++++|+.+|
T Consensus       124 ---~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G  198 (350)
T cd08256         124 ---NNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKN  198 (350)
T ss_pred             ---cCCCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence               0124799999999988 57899999999998887 8889999986 7789999999999778999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +..++++++++++.+.++++|++.+++..+.+  +.+.+.+++++ ++|++||++|....+..++++++++ |+++.++.
T Consensus       199 ~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~  275 (350)
T cd08256         199 PKKLIVLDLKDERLALARKFGADVVLNPPEVD--VVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSV  275 (350)
T ss_pred             CcEEEEEcCCHHHHHHHHHcCCcEEecCCCcC--HHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcc
Confidence            87788898899999999999998888776544  77778888777 8999999998666788899999998 99999975


Q ss_pred             CCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713          248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII  325 (329)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv  325 (329)
                      ...............+++++.++....    ..+.++++++.++.+.+.+++.+.|+++++++|++.+++++.. |+++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         276 FGDPVTVDWSIIGDRKELDVLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             CCCCCccChhHhhcccccEEEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            433222221111124566777665432    3688899999999887654567999999999999999987754 6653

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.5e-35  Score=272.75  Aligned_cols=289  Identities=25%  Similarity=0.374  Sum_probs=231.3

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++++.|++||+|++.+..+|+.|+.|..|+++.|.+....   |                 
T Consensus        85 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~---g-----------------  144 (384)
T cd08265          85 TEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKEL---G-----------------  144 (384)
T ss_pred             cCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCccee---e-----------------
Confidence            35689999999999999999999999999999999999999999999999999864310   1                 


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCC------ccchhcccccccchhhhhhhc-cCCCCCCeEEEEcCCHHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAP------LDKVCVLSCGISTGFGATVNV-AKPKKGQSVAIFGLGAVGLAAAEG  163 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~------~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~iG~aai~l  163 (329)
                        ....|+|++|+.++++.++++|++++      ..++++++.++++||+++... .++++|++|||+|+|.+|++++++
T Consensus       145 --~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~l  222 (384)
T cd08265         145 --FSADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIAL  222 (384)
T ss_pred             --ecCCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHH
Confidence              11247999999999999999998642      233667788899999987666 689999999999889999999999


Q ss_pred             HHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCC-CchHHHHHHhhhcC-CccEEEEecCC-HHHHHHHHHhhccCCe
Q 047713          164 ARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY-DKPVQQVIADMTNG-GVDRSVECTGS-VQAMISAFECVHDGWG  240 (329)
Q Consensus       164 a~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~-~~d~Vid~~g~-~~~~~~~~~~l~~~~G  240 (329)
                      |+..|+.+|+++++++++.+.++++|++.+++..+. ..++.+.+++++.+ ++|+|+|++|. ...+..++++|+++ |
T Consensus       223 A~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G  301 (384)
T cd08265         223 AKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-G  301 (384)
T ss_pred             HHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-C
Confidence            999998679999888999999999999888876643 11377788888877 89999999986 34778899999998 9


Q ss_pred             EEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc
Q 047713          241 VAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES  320 (329)
Q Consensus       241 ~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~  320 (329)
                      +++.+|.......+.. .....+..++.+.....  ....+.++++++.++.+.+..++.+.|+++++++|++.+.++..
T Consensus       302 ~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~  378 (384)
T cd08265         302 KIVYIGRAATTVPLHL-EVLQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTD  378 (384)
T ss_pred             EEEEECCCCCCCcccH-HHHhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCC
Confidence            9999986543221111 22234556676654321  12468899999999988765557789999999999999776655


Q ss_pred             eEEEE
Q 047713          321 IRCII  325 (329)
Q Consensus       321 ~kvvv  325 (329)
                      .|+|+
T Consensus       379 ~kvvv  383 (384)
T cd08265         379 GKITI  383 (384)
T ss_pred             ceEEe
Confidence            57765

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=1.8e-35  Score=268.22  Aligned_cols=280  Identities=26%  Similarity=0.420  Sum_probs=233.8

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|++++.|++||+|++.+..+|+.|..|..|+.++|.+....   |+                 
T Consensus        56 ~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------  115 (340)
T cd05284          56 KLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFP---GI-----------------  115 (340)
T ss_pred             CCCeecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCccc---Cc-----------------
Confidence            5689999999999999999999999999999999999999999999999999876542   11                 


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhc-cCCCCCCeEEEEcCCHHHHHHHHHHHHcC-C
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNV-AKPKKGQSVAIFGLGAVGLAAAEGARVSG-A  169 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~iG~aai~la~~~G-~  169 (329)
                        ...|+|++|+.+++++++++|+++++++++++++++.|||+++... ..+.++++|||+|+|.+|++++++|+.+| .
T Consensus       116 --~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~  193 (340)
T cd05284         116 --GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA  193 (340)
T ss_pred             --cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC
Confidence              1247999999999999999999999999999999999999987665 46889999999999789999999999999 6


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|+++++++++.+.++++|++++++..+.   +...+++++++ ++|+|+|++|....+..++++++++ |+++.++..
T Consensus       194 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~  268 (340)
T cd05284         194 -TVIAVDRSEEALKLAERLGADHVLNASDD---VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYG  268 (340)
T ss_pred             -cEEEEeCCHHHHHHHHHhCCcEEEcCCcc---HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCC
Confidence             78888888999999999999888876543   66778887776 8999999998777889999999998 999999865


Q ss_pred             CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR  326 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~  326 (329)
                      .. ..... ...+.++.++.+.....   ...+..+++++.++.+.+   ..+.|+++++++|++.+++++.. |+++.
T Consensus       269 ~~-~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~  339 (340)
T cd05284         269 GH-GRLPT-SDLVPTEISVIGSLWGT---RAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLV  339 (340)
T ss_pred             CC-CccCH-HHhhhcceEEEEEeccc---HHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEec
Confidence            43 11221 11245777877765432   256888999999997753   34689999999999999988764 77764

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=2.4e-35  Score=267.63  Aligned_cols=285  Identities=29%  Similarity=0.503  Sum_probs=231.3

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|+++++|++||+|++.+..+|+.|++|+.|+++.|++......                    
T Consensus        53 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------  112 (343)
T cd05285          53 KEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAAT--------------------  112 (343)
T ss_pred             CCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCcccccc--------------------
Confidence            457899999999999999999999999999999999999999999999999986422100                    


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                       ....|+|++|++++++.++++|+++++++++.+ .++++|++++ ..+++++|++|||.|+|.+|++++|+|+.+|++.
T Consensus       113 -~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~  189 (343)
T cd05285         113 -PPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATK  189 (343)
T ss_pred             -ccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence             012479999999999999999999999998766 5788899885 7889999999999988999999999999999955


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCc-hHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDK-PVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      |+++++++++.++++++|++.+++..+.+. .+.+.+.+.+.+ ++|+|||++|+...+...+++++++ |+++.++...
T Consensus       190 v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  268 (343)
T cd05285         190 VVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGK  268 (343)
T ss_pred             EEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC
Confidence            888888999999999999999888765430 126677777776 8999999998766889999999998 9999998644


Q ss_pred             CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc-c-eEEEE
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE-S-IRCII  325 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~-~-~kvvv  325 (329)
                      .....++. ....+++++.+....    .+.++++++++.++.+.+.+.+.++|+++++++|++.+.+++ . .|++|
T Consensus       269 ~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         269 PEVTLPLS-AASLREIDIRGVFRY----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             CCCccCHH-HHhhCCcEEEEeccC----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            32222211 234466666665422    156888999999997765455678999999999999998875 3 68887

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=2.5e-35  Score=267.68  Aligned_cols=289  Identities=27%  Similarity=0.376  Sum_probs=232.8

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|++|+.+++||+|++.+..+|+.|.+|+.+++..|++.... +..             +    
T Consensus        52 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------------~----  113 (344)
T cd08284          52 TPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLF-GYA-------------G----  113 (344)
T ss_pred             CCCcccccceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccc-ccc-------------c----
Confidence            4578999999999999999999999999999999999999999999999999764221 000             0    


Q ss_pred             eccccccccccEEeeec--cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           92 HFVGTSTFSEYTVTHVG--CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                      ....+|+|++|+.++++  .++++|+++++++++++++++.|||+++. ..++++|++|||+|+|.+|++++++|+.+|+
T Consensus       114 ~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~  192 (344)
T cd08284         114 SPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGA  192 (344)
T ss_pred             cCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCC
Confidence            01124799999999975  99999999999999999999999999864 4788999999999889999999999999997


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      .+++++++++++.+.++++|+. .++....+  +...+.+++++ ++|++||++|....+..++++++++ |+++.+|..
T Consensus       193 ~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~--~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~  268 (344)
T cd08284         193 ARVFAVDPVPERLERAAALGAE-PINFEDAE--PVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVH  268 (344)
T ss_pred             ceEEEEcCCHHHHHHHHHhCCe-EEecCCcC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcC
Confidence            5788888888999999999975 34444433  77788887776 8999999998777889999999998 999999875


Q ss_pred             CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR  326 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~  326 (329)
                      ............+.++.++.+..   ....+.++++++++.++.+.+.+++.+.+++++++++++.+++++..|+|++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~  343 (344)
T cd08284         269 TAEEFPFPGLDAYNKNLTLRFGR---CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD  343 (344)
T ss_pred             CCCCccccHHHHhhcCcEEEEec---CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence            53221111222345677766432   1223678899999999988765556789999999999999887766777764

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=8.7e-35  Score=263.80  Aligned_cols=285  Identities=26%  Similarity=0.385  Sum_probs=229.9

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|+++|||++|+|+++|++++.+++||+|++.+.++|+.|+.|+.+++++|......                      
T Consensus        56 ~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  113 (341)
T PRK05396         56 PVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGV----------------------  113 (341)
T ss_pred             CCCcccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCccee----------------------
Confidence            5688999999999999999999999999999999999999999999999999864211                      


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      +...+|+|++|+.++.+.++++|+++++++++. ..++.+++.++..  ...+|++|+|.|+|.+|++++|+|+.+|+++
T Consensus       114 ~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~-~~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~  190 (341)
T PRK05396        114 GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAI-FDPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARH  190 (341)
T ss_pred             eecCCCcceeeEEechHHeEECcCCCCHHHhHh-hhHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCE
Confidence            122357999999999999999999999888764 4566666655432  3468999999988999999999999999866


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +++++.++++.++++++|++.+++..+.+  +.+.+++++.+ ++|+|||+.|+...+..++++++++ |+++.++....
T Consensus       191 v~~~~~~~~~~~~~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~  267 (341)
T PRK05396        191 VVITDVNEYRLELARKMGATRAVNVAKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG  267 (341)
T ss_pred             EEEEcCCHHHHHHHHHhCCcEEecCcccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC
Confidence            88888889999999999999988876655  77888887766 8999999998878889999999998 99999986543


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEeeC
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD  328 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~~  328 (329)
                      ...... .....++.++.++...  ...+.+..+++++.++ +.+.+.+.+.++++++++|++.+.+++..|++++++
T Consensus       268 ~~~~~~-~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~  341 (341)
T PRK05396        268 DMAIDW-NKVIFKGLTIKGIYGR--EMFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD  341 (341)
T ss_pred             CCcccH-HHHhhcceEEEEEEcc--CccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence            322222 3334567777765421  1124566788888887 445556778999999999999998877569998764

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=5.3e-35  Score=270.10  Aligned_cols=283  Identities=19%  Similarity=0.278  Sum_probs=230.4

Q ss_pred             CcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeec
Q 047713           14 PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHF   93 (329)
Q Consensus        14 P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   93 (329)
                      |.++|||++|+|+++|++++.|++||+|++.+...|+.|..|..+..+.|.....+   |+                  .
T Consensus        82 ~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~---g~------------------~  140 (393)
T cd08246          82 YHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIW---GY------------------E  140 (393)
T ss_pred             ccccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccc---cc------------------c
Confidence            36999999999999999999999999999999999999999999999999753221   11                  0


Q ss_pred             cccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhc--cCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           94 VGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNV--AKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        94 ~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                      ...|+|++|+.+++..++++|+++++++++.++++++|||+++...  +++++|++|+|+|+ |.+|++++++|+.+|+ 
T Consensus       141 ~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-  219 (393)
T cd08246         141 TNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-  219 (393)
T ss_pred             CCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-
Confidence            1247999999999999999999999999999999999999987544  67899999999987 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCC--------------------chHHHHHHhhhcC--CccEEEEecCCHHHH
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYD--------------------KPVQQVIADMTNG--GVDRSVECTGSVQAM  228 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~--------------------~~~~~~~~~~~~~--~~d~Vid~~g~~~~~  228 (329)
                      +++++++++++.+.++++|++.+++.++.+                    ..+.+.+.+++++  ++|+|||++|. ..+
T Consensus       220 ~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~  298 (393)
T cd08246         220 NPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATF  298 (393)
T ss_pred             eEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhH
Confidence            677788899999999999999888764321                    1255677777765  79999999986 678


Q ss_pred             HHHHHhhccCCeEEEEeccCCCCC-ccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeeccc
Q 047713          229 ISAFECVHDGWGVAVLVGVPNKDD-AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSE  307 (329)
Q Consensus       229 ~~~~~~l~~~~G~vv~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~  307 (329)
                      ..++++++++ |+++.++...... ... ...++.++.++.+++...+   +.+..+++++.++.+.  +.+++.|++++
T Consensus       299 ~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~l~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~l~--~~~~~~~~l~~  371 (393)
T cd08246         299 PTSVFVCDRG-GMVVICAGTTGYNHTYD-NRYLWMRQKRIQGSHFAND---REAAEANRLVMKGRID--PCLSKVFSLDE  371 (393)
T ss_pred             HHHHHHhccC-CEEEEEcccCCCCCCCc-HHHHhhheeEEEecccCcH---HHHHHHHHHHHcCCce--eeeeEEEeHHH
Confidence            8999999998 9999998643321 111 1223456777777765443   5688899999998765  34678999999


Q ss_pred             HHHHHHHHHcC-cc-eEEEEe
Q 047713          308 INKAFDLMLAG-ES-IRCIIR  326 (329)
Q Consensus       308 i~~a~~~~~~~-~~-~kvvv~  326 (329)
                      +++|++.+.++ +. .|+++-
T Consensus       372 ~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         372 TPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             HHHHHHHHHhCccccceEEEe
Confidence            99999999887 55 477664

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=8.3e-35  Score=264.35  Aligned_cols=287  Identities=31%  Similarity=0.425  Sum_probs=236.1

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++++.+++||+|++.+...|++|++|..+.++.|.......  |                  
T Consensus        53 ~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------------------  112 (345)
T cd08286          53 TPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWIL--G------------------  112 (345)
T ss_pred             CCCceecccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCccccc--c------------------
Confidence            45789999999999999999999999999999999999999999999998887531110  0                  


Q ss_pred             eccccccccccEEeeec--cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           92 HFVGTSTFSEYTVTHVG--CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                       ...+|+|++|+.++.+  .++++|++++..+++.+++++.+||.++....++++|++|||.|+|.+|++++|+|+.+|.
T Consensus       113 -~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~  191 (345)
T cd08286         113 -NLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSP  191 (345)
T ss_pred             -cccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence             1124799999999987  8999999999999999999999999877777889999999999889999999999999994


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      .+|++++.++++.+.++++|++.++++.+.+  +...+.+++.+ ++|+|||++|....++.+++.++++ |+++.+|..
T Consensus       192 ~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~  268 (345)
T cd08286         192 SKIIMVDLDDNRLEVAKKLGATHTVNSAKGD--AIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVH  268 (345)
T ss_pred             CeEEEEcCCHHHHHHHHHhCCCceecccccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEeccc
Confidence            4788898899999999999999888876554  77777777766 8999999998777889999999998 999999864


Q ss_pred             CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc---ceEEEE
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE---SIRCII  325 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~---~~kvvv  325 (329)
                      ........ ...+.++.++.+....    .+.+.++++++.++.+.+.++++++|++++++++++.+.+..   ..|++|
T Consensus       269 ~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~  343 (345)
T cd08286         269 GKPVDLHL-EKLWIKNITITTGLVD----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVII  343 (345)
T ss_pred             CCCCCcCH-HHHhhcCcEEEeecCc----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEE
Confidence            43222221 1225577777764322    145788899999998776666779999999999999998763   459988


Q ss_pred             ee
Q 047713          326 RM  327 (329)
Q Consensus       326 ~~  327 (329)
                      ++
T Consensus       344 ~~  345 (345)
T cd08286         344 DF  345 (345)
T ss_pred             eC
Confidence            64

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=9e-35  Score=265.96  Aligned_cols=286  Identities=27%  Similarity=0.421  Sum_probs=227.1

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++++.|++||+|++.+..+|+.|..|+.|.++.|++....   +.                 
T Consensus        72 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~---~~-----------------  131 (364)
T PLN02702         72 KEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF---AT-----------------  131 (364)
T ss_pred             CCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCcccc---CC-----------------
Confidence            3588999999999999999999999999999999999999999999999999863211   00                 


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                       ....|+|++|+.++++.++++|+++++++++. ..+++++++++ ...++.+|++|+|+|+|++|++++++|+.+|++.
T Consensus       132 -~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~  208 (364)
T PLN02702        132 -PPVHGSLANQVVHPADLCFKLPENVSLEEGAM-CEPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPR  208 (364)
T ss_pred             -CCCCCcccceEEcchHHeEECCCCCCHHHHhh-hhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence             01247999999999999999999999988764 23455677775 7788999999999988999999999999999977


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhh---hcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADM---TNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~---~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +++++.++++.+.++++|++..+++.....++.+.+.++   .++++|+|||++|.+..+..++++++++ |+++.+|..
T Consensus       209 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~  287 (364)
T PLN02702        209 IVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMG  287 (364)
T ss_pred             EEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccC
Confidence            888988999999999999988776543222366665544   2348999999998778899999999998 999999864


Q ss_pred             CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeec--ccHHHHHHHHHcCcc-eEEEE
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPF--SEINKAFDLMLAGES-IRCII  325 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l--~~i~~a~~~~~~~~~-~kvvv  325 (329)
                      ...... .......+++++.+.+..    ...+..+++++.++.+.+.+.+.+.|++  +++++|++.+++++. .|++|
T Consensus       288 ~~~~~~-~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~  362 (364)
T PLN02702        288 HNEMTV-PLTPAAAREVDVVGVFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMF  362 (364)
T ss_pred             CCCCcc-cHHHHHhCccEEEEeccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEE
Confidence            332111 112235677888876532    1467889999999988665567788665  799999999887765 48887


Q ss_pred             e
Q 047713          326 R  326 (329)
Q Consensus       326 ~  326 (329)
                      .
T Consensus       363 ~  363 (364)
T PLN02702        363 N  363 (364)
T ss_pred             e
Confidence            4

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-34  Score=263.74  Aligned_cols=285  Identities=27%  Similarity=0.430  Sum_probs=235.8

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|++++.|++||+|++.+..+|+.|.+|+.|+.+.|.+...   .|                  
T Consensus        53 ~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------  111 (345)
T cd08260          53 TLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PG------------------  111 (345)
T ss_pred             CCCeeeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcc---cc------------------
Confidence            458899999999999999999999999999987778999999999999999997432   11                  


Q ss_pred             eccccccccccEEeeec--cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           92 HFVGTSTFSEYTVTHVG--CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                       ....|+|++|+.+++.  .++++|++++.++++.++.++.+||+++....++.++++|+|+|+|.+|++++++|+.+|+
T Consensus       112 -~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~  190 (345)
T cd08260         112 -FTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA  190 (345)
T ss_pred             -cCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence             1124799999999985  8999999999999999999999999998778889999999999999999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCC-CCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKD-YDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|+++++++++.+.++++|++.+++..+ .+  +.+.+..+..+++|++||++|....+..++++++++ |+++.+|..
T Consensus       191 -~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~  266 (345)
T cd08260         191 -RVIAVDIDDDKLELARELGAVATVNASEVED--VAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLT  266 (345)
T ss_pred             -eEEEEeCCHHHHHHHHHhCCCEEEccccchh--HHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCc
Confidence             7888888999999999999999988765 33  667777766558999999998767888999999998 999999864


Q ss_pred             CCCCc-cccccc-cccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713          249 NKDDA-FKTHPM-NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII  325 (329)
Q Consensus       249 ~~~~~-~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv  325 (329)
                      ..... ...... ++.++.++.+.....   .+.++++++++.++.+.+.+.+.+.++++++++|++.+++++.. |+|+
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~  343 (345)
T cd08260         267 LGEEAGVALPMDRVVARELEIVGSHGMP---AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVI  343 (345)
T ss_pred             CCCCCccccCHHHHhhcccEEEeCCcCC---HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEe
Confidence            43221 122211 235677777765422   25788899999999876655567899999999999999887764 7665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=1.2e-34  Score=263.74  Aligned_cols=284  Identities=26%  Similarity=0.414  Sum_probs=234.8

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      ++|.++|+|++|+|+++|++++.+++||+|++.+...|+.|..|.+++.+.|......   |                  
T Consensus        65 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------------  123 (350)
T cd08240          65 KLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL---G------------------  123 (350)
T ss_pred             CCCcccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce---e------------------
Confidence            4578999999999999999999999999999999999999999999999999763211   0                  


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                       ....|++++|+.++.+.++++|+++++.+++.+++++.+||+++.....++++++|+|+|+|.+|++++|+|+.+|+++
T Consensus       124 -~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~  202 (350)
T cd08240         124 -IFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPAN  202 (350)
T ss_pred             -eeccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCe
Confidence             1124799999999999999999999999999999999999998776666678999999988999999999999999977


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      |+++++++++.+.++++|++.+++..+.+  +.+.+.+..++++|++||++|....+..++++|+++ |+++.++.....
T Consensus       203 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~  279 (350)
T cd08240         203 IIVVDIDEAKLEAAKAAGADVVVNGSDPD--AAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGE  279 (350)
T ss_pred             EEEEeCCHHHHHHHHHhCCcEEecCCCcc--HHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCC
Confidence            88888899999999999998888766544  666777766558999999998777899999999998 999999865443


Q ss_pred             CccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEe
Q 047713          252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIR  326 (329)
Q Consensus       252 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~  326 (329)
                      ...... ....++.++.+......   +++.++++++.++.+..  .....|+++++++|++.+.+++. .|++++
T Consensus       280 ~~~~~~-~~~~~~~~i~~~~~~~~---~~~~~~~~ll~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         280 ATLPLP-LLPLRALTIQGSYVGSL---EELRELVALAKAGKLKP--IPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             CcccHH-HHhhcCcEEEEcccCCH---HHHHHHHHHHHcCCCcc--ceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            222222 22347778877665433   56888999999987653  35678999999999999988775 487764

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-34  Score=264.87  Aligned_cols=307  Identities=31%  Similarity=0.518  Sum_probs=238.5

Q ss_pred             CCCcccCCcceEEEEEecCCCCc---CCCCCEEeecCCCCCCCCCcccCCCCCCCcccccc--CCCCccccCCccc-ccc
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTD---LQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN--TDRGVMINDGQSR-FSI   85 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~---~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~--~~~g~~~~~~~~~-~~~   85 (329)
                      .+|.++|||++|+|+.+|++++.   |++||+|++.+..+|+.|.+|..+++++|.....+  ..++.  .+|..+ +..
T Consensus        52 ~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  129 (367)
T cd08263          52 PPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTL--YDGTTRLFRL  129 (367)
T ss_pred             CCCcccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccc--cCCccccccc
Confidence            56889999999999999999988   99999999999999999999999999999863210  00000  000000 000


Q ss_pred             CCCceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHH
Q 047713           86 KGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGAR  165 (329)
Q Consensus        86 ~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~  165 (329)
                      .+.+.+. ...|+|++|+.++.+.++++|+++++.+++.++.++.|||.++.....++++++|||+|+|.+|++++++|+
T Consensus       130 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak  208 (367)
T cd08263         130 DGGPVYM-YSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAK  208 (367)
T ss_pred             CCCcccc-ccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHH
Confidence            0000000 124799999999999999999999999999999999999999877788899999999988999999999999


Q ss_pred             HcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713          166 VSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       166 ~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~  244 (329)
                      .+|++++++++.++++.+.++++|++.+++..+.+  +...++...++ ++|+|||++|+.+.+..++++++++ |+++.
T Consensus       209 ~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~  285 (367)
T cd08263         209 AFGASPIIAVDVRDEKLAKAKELGATHTVNAAKED--AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVV  285 (367)
T ss_pred             HcCCCeEEEEeCCHHHHHHHHHhCCceEecCCccc--HHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEE
Confidence            99995588888899999999999999898876655  77778877766 8999999998755788999999998 99999


Q ss_pred             eccCCCCCccccccc-cccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-E
Q 047713          245 VGVPNKDDAFKTHPM-NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-R  322 (329)
Q Consensus       245 ~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-k  322 (329)
                      ++............. ++.++.++.++...  ...+.++.+++++.++.+.+..++++.+++++++++++.+++++.. |
T Consensus       286 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~  363 (367)
T cd08263         286 VGLAPGGATAEIPITRLVRRGIKIIGSYGA--RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGR  363 (367)
T ss_pred             EccCCCCCccccCHHHHhhCCeEEEecCCC--CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccce
Confidence            986443211122212 22567777664321  1124678889999999877655567899999999999999988754 8


Q ss_pred             EEEe
Q 047713          323 CIIR  326 (329)
Q Consensus       323 vvv~  326 (329)
                      +||.
T Consensus       364 ~~~~  367 (367)
T cd08263         364 AIVE  367 (367)
T ss_pred             eeeC
Confidence            8763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=5.9e-35  Score=260.88  Aligned_cols=251  Identities=22%  Similarity=0.262  Sum_probs=193.6

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|+++ .|++||||++.    |..|..|..+                                 
T Consensus        57 ~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~----~~~c~~~~~~---------------------------------   98 (308)
T TIGR01202        57 GYPLVPGYESVGRVVEAGPDT-GFRPGDRVFVP----GSNCYEDVRG---------------------------------   98 (308)
T ss_pred             CCCccCcceeEEEEEEecCCC-CCCCCCEEEEe----Cccccccccc---------------------------------
Confidence            579999999999999999999 69999999873    2234332111                                 


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                         ..|+|+||+.+|++.++++|++++++. +.+ ..++|||+++.. . ..++++|+|+|+|++|++++|+|+.+|++.
T Consensus        99 ---~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~  171 (308)
T TIGR01202        99 ---LFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSP  171 (308)
T ss_pred             ---cCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCce
Confidence               137999999999999999999998754 444 457899998644 3 346899999999999999999999999966


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      |++++.++++++.++++   .++++.+       .    .+.++|+|||++|.+..++.++++++++ |+++.+|.....
T Consensus       172 v~~~~~~~~rl~~a~~~---~~i~~~~-------~----~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~  236 (308)
T TIGR01202       172 PAVWETNPRRRDGATGY---EVLDPEK-------D----PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEP  236 (308)
T ss_pred             EEEeCCCHHHHHhhhhc---cccChhh-------c----cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCC
Confidence            77787777777666543   3333321       0    1237999999999887889999999998 999999975433


Q ss_pred             CccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc-ceEEEEe
Q 047713          252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE-SIRCIIR  326 (329)
Q Consensus       252 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~-~~kvvv~  326 (329)
                      ..++. ...+.+++++.++....   .++++++++++.++++.+++++++.|||+|+++|++.+.++. ..|++|+
T Consensus       237 ~~~~~-~~~~~~~~~i~~~~~~~---~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       237 VNFDF-VPAFMKEARLRIAAEWQ---PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             ccccc-chhhhcceEEEEecccc---hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            22222 23356778888765432   257999999999999988888999999999999999877654 4688874

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=3.6e-34  Score=260.16  Aligned_cols=284  Identities=27%  Similarity=0.417  Sum_probs=231.6

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++++.+++||+|++.+..+|+.|.+|..|+.+.|.+.... .                    
T Consensus        52 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------------  110 (345)
T cd08287          52 RAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFW-G--------------------  110 (345)
T ss_pred             CCCcccccceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcc-c--------------------
Confidence            4588999999999999999999999999999877788999999999999999864321 0                    


Q ss_pred             eccccccccccEEeeec--cEEEcCCCCCccch-----hcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHH
Q 047713           92 HFVGTSTFSEYTVTHVG--CVAKINPAAPLDKV-----CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGA  164 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~a-----a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la  164 (329)
                       ....|+|++|+.++.+  .++++|++++++.+     +++...+++|++++ ..+++++|++|+|.|+|.+|++++++|
T Consensus       111 -~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~la  188 (345)
T cd08287         111 -AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAA  188 (345)
T ss_pred             -CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence             1124799999999975  99999999987221     12335678888875 467899999999988899999999999


Q ss_pred             HHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEE
Q 047713          165 RVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAV  243 (329)
Q Consensus       165 ~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv  243 (329)
                      +..|+++++++++++++.++++++|++.++++.+.+  +.+.+.+++++ ++|+++|++|++..+..++++++++ |+++
T Consensus       189 k~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~--~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v  265 (345)
T cd08287         189 KRLGAERIIAMSRHEDRQALAREFGATDIVAERGEE--AVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVG  265 (345)
T ss_pred             HHcCCCEEEEECCCHHHHHHHHHcCCceEecCCccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEE
Confidence            999997799998898899999999999999887654  77788887776 8999999998878899999999998 9999


Q ss_pred             EeccCCCCCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceE
Q 047713          244 LVGVPNKDDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIR  322 (329)
Q Consensus       244 ~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~k  322 (329)
                      .++......  .... ..+.++.++.+.....   .+.++++++++.++.+.+.+++.+.++++++++|++.+.+.+..|
T Consensus       266 ~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k  340 (345)
T cd08287         266 YVGVPHGGV--ELDVRELFFRNVGLAGGPAPV---RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIK  340 (345)
T ss_pred             EecccCCCC--ccCHHHHHhcceEEEEecCCc---HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceE
Confidence            998654322  2222 3356788887643222   256888999999998876555678999999999999988877779


Q ss_pred             EEEe
Q 047713          323 CIIR  326 (329)
Q Consensus       323 vvv~  326 (329)
                      ++|+
T Consensus       341 ~~~~  344 (345)
T cd08287         341 VLLR  344 (345)
T ss_pred             EEeC
Confidence            9885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=262.43  Aligned_cols=259  Identities=20%  Similarity=0.284  Sum_probs=211.6

Q ss_pred             CCCcccCC--cceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           12 LFPRIFGH--EAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        12 ~~P~~~G~--e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      .+|+++|+  |++|+|..+|++++.|++||+|+..                                             
T Consensus        71 ~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------  105 (348)
T PLN03154         71 LPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI---------------------------------------------  105 (348)
T ss_pred             CCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec---------------------------------------------
Confidence            36899998  8899999999999999999999843                                             


Q ss_pred             eeeccccccccccEEeeecc--EEE--cCCCCCcc-chhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHH
Q 047713           90 IYHFVGTSTFSEYTVTHVGC--VAK--INPAAPLD-KVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEG  163 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~--~~~--~p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~l  163 (329)
                             |+|+||+.++++.  +++  +|++++++ ++|++++++.|||+++....++++|++|||+|+ |++|++++|+
T Consensus       106 -------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiql  178 (348)
T PLN03154        106 -------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQL  178 (348)
T ss_pred             -------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHH
Confidence                   5899999999853  544  48999986 688999999999999888889999999999987 9999999999


Q ss_pred             HHHcCCCEEEEEcCChhhHHHHH-hcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEE
Q 047713          164 ARVSGASRIIGVDLNPSRFNEAK-KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA  242 (329)
Q Consensus       164 a~~~G~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~v  242 (329)
                      |+.+|+ +|+++++++++.++++ ++|++.++++.+.+ ++.+.+++.+++++|+|||++|. ..+..++++++++ |++
T Consensus       179 Ak~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~-~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~i  254 (348)
T PLN03154        179 AKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKEEP-DLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRI  254 (348)
T ss_pred             HHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCCcc-cHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEE
Confidence            999999 7999989999999987 79999999876431 27777777766689999999986 6889999999998 999


Q ss_pred             EEeccCCCCCc-c---c-cccccccccceEEEeeecCCCC--CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHH
Q 047713          243 VLVGVPNKDDA-F---K-THPMNLLNERTLKGTFFGNYKP--RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLM  315 (329)
Q Consensus       243 v~~g~~~~~~~-~---~-~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~  315 (329)
                      +.+|....... .   . .....+.+++++.|+....+..  .+.++++++++.+|++.+  .+...|+|+++++|++.+
T Consensus       255 v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~--~~~~~~~L~~~~~A~~~l  332 (348)
T PLN03154        255 AVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY--IEDMSEGLESAPAALVGL  332 (348)
T ss_pred             EEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC--ceecccCHHHHHHHHHHH
Confidence            99986543211 0   0 1122456788888876543311  135778999999998753  466789999999999999


Q ss_pred             HcCcc-eEEEEeeC
Q 047713          316 LAGES-IRCIIRMD  328 (329)
Q Consensus       316 ~~~~~-~kvvv~~~  328 (329)
                      ++++. +|+||++.
T Consensus       333 ~~g~~~GKvVl~~~  346 (348)
T PLN03154        333 FSGKNVGKQVIRVA  346 (348)
T ss_pred             HcCCCCceEEEEec
Confidence            99886 49999875

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=4.2e-34  Score=264.36  Aligned_cols=285  Identities=19%  Similarity=0.283  Sum_probs=230.4

Q ss_pred             cccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeecc
Q 047713           15 RIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFV   94 (329)
Q Consensus        15 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~   94 (329)
                      .++|||++|+|+++|++++.|++||+|++.+...|+.|++|+.|+++.|......   |.                  ..
T Consensus        79 ~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~------------------~~  137 (398)
T TIGR01751        79 HIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIW---GY------------------ET  137 (398)
T ss_pred             eecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccc---cc------------------cC
Confidence            3899999999999999999999999999999999999999999999999754211   10                  01


Q ss_pred             ccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhh--ccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCE
Q 047713           95 GTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVN--VAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASR  171 (329)
Q Consensus        95 ~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~  171 (329)
                      ..|+|+||+.++++.++++|+++++++++.+++++.+||+++..  ..++++|++|+|+|+ |.+|++++++|+.+|+ +
T Consensus       138 ~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~  216 (398)
T TIGR01751       138 NFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-N  216 (398)
T ss_pred             CCccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-e
Confidence            24799999999999999999999999999999999999998654  467899999999987 9999999999999999 6


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCC--------------------chHHHHHHhhhcC-CccEEEEecCCHHHHHH
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYD--------------------KPVQQVIADMTNG-GVDRSVECTGSVQAMIS  230 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~--------------------~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~  230 (329)
                      ++.++.++++.+.++++|++.+++.++.+                    ..+.+.+.+++.+ ++|++||++|. ..+..
T Consensus       217 vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~  295 (398)
T TIGR01751       217 PVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPT  295 (398)
T ss_pred             EEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHH
Confidence            77777888999999999999999865421                    1245566777776 89999999985 67889


Q ss_pred             HHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHH
Q 047713          231 AFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINK  310 (329)
Q Consensus       231 ~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~  310 (329)
                      ++++++++ |+++.+|..............+.++.++.++.....   ++++++++++.++.+.  +.+++.++++++++
T Consensus       296 ~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~--~~~~~~~~l~~~~~  369 (398)
T TIGR01751       296 SVFVCRRG-GMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFANL---REAWEANRLVAKGRID--PTLSKVYPLEEIGQ  369 (398)
T ss_pred             HHHhhccC-CEEEEEccccCCCCCcCHHHHhhcccEEEccccCcH---HHHHHHHHHHHCCCcc--cceeeEEcHHHHHH
Confidence            99999998 999999875432111111223345666776654433   4577889999988765  34678999999999


Q ss_pred             HHHHHHcCcc-eEEEEeeC
Q 047713          311 AFDLMLAGES-IRCIIRMD  328 (329)
Q Consensus       311 a~~~~~~~~~-~kvvv~~~  328 (329)
                      +++.+.+++. .|+|+++.
T Consensus       370 a~~~~~~~~~~gkvvv~~~  388 (398)
T TIGR01751       370 AHQDVHRNHHQGNVAVLVL  388 (398)
T ss_pred             HHHHHHcCCCCceEEEEeC
Confidence            9999988775 49988875

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.6e-34  Score=258.49  Aligned_cols=275  Identities=21%  Similarity=0.320  Sum_probs=219.8

Q ss_pred             CCCcccCCcceEEEEEecCCCCc-CCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTD-LQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .+|.++|+|++|+|+++|++++. |++||+|++.+..+|+.|+.|..|+..                             
T Consensus        62 ~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~-----------------------------  112 (341)
T cd08262          62 GADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP-----------------------------  112 (341)
T ss_pred             CCCcccccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc-----------------------------
Confidence            46889999999999999999997 999999999999999999999544221                             


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                         ...|+|+||+.++.+.++++|+++++++++ ++.++++||++ ....++++|++|||+|+|.+|++++|+|+.+|++
T Consensus       113 ---~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~  187 (341)
T cd08262         113 ---EAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVG  187 (341)
T ss_pred             ---CCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence               114799999999999999999999998776 67788899998 5788999999999998899999999999999997


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCc--hHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDK--PVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~--~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .++++++++++.++++++|++.+++..+.+.  .+. .+.....+ ++|+|||++|....+..++++++++ |+++.++.
T Consensus       188 ~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~  265 (341)
T cd08262         188 PIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGV  265 (341)
T ss_pred             EEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECC
Confidence            7888888999999999999988888655421  122 34444455 8999999998755778899999998 99999986


Q ss_pred             CCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713          248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR  326 (329)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~  326 (329)
                      ......... ...+.++.++.+....   ..+.+.++++++.++.+.+.+++.+.|++++++++++.+++++.. |+|++
T Consensus       266 ~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         266 CMESDNIEP-ALAIRKELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             CCCCCccCH-HHHhhcceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            533222111 1113466666654322   124688899999999887666667899999999999999988764 77763

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=9.2e-34  Score=257.00  Aligned_cols=286  Identities=28%  Similarity=0.427  Sum_probs=231.8

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|++++.|++||+|+..+...|+.|..|..++...|...+..                      
T Consensus        54 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  111 (340)
T TIGR00692        54 KPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIF----------------------  111 (340)
T ss_pred             CCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcceE----------------------
Confidence            4577999999999999999999999999999999999999999999999999875321                      


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      +....|+|++|+.++++.++++|++++.+. ++++.++.++++++  ....++|++|+|.|+|.+|++++|+|+.+|++.
T Consensus       112 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~-a~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~  188 (340)
T TIGR00692       112 GVDTDGCFAEYAVVPAQNIWKNPKSIPPEY-ATIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYP  188 (340)
T ss_pred             eecCCCcceeEEEeehHHcEECcCCCChHh-hhhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence            111247999999999999999999999854 56778888888875  345678999999888999999999999999854


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      |+++++++++.++++++|++.+++..+.+  +.+.+.+++++ ++|++||++|....+...+++++++ |+++.+|....
T Consensus       189 v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~  265 (340)
T TIGR00692       189 VIVSDPNEYRLELAKKMGATYVVNPFKED--VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPG  265 (340)
T ss_pred             EEEECCCHHHHHHHHHhCCcEEEcccccC--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCC
Confidence            88888889999999999998888876655  77888887766 8999999998777889999999998 99999986533


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM  327 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~  327 (329)
                      .....+......++.++.+...  ....+.+.++++++.++.+.+.+++.+.+++++++++++.+++++..|+|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~  340 (340)
T TIGR00692       266 KVTIDFTNKVIFKGLTIYGITG--RHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL  340 (340)
T ss_pred             CcccchhhhhhhcceEEEEEec--CCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            2222222233456666665442  11224577889999999886555678999999999999999877667888764

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-33  Score=256.23  Aligned_cols=283  Identities=32%  Similarity=0.531  Sum_probs=230.9

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|++++.|++||+|+..+..+|+.|..|+.++.+.|......                      
T Consensus        52 ~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  109 (337)
T cd08261          52 SYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVL----------------------  109 (337)
T ss_pred             CCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCee----------------------
Confidence            4578999999999999999999999999999988899999999999999999642211                      


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      .....|+|++|+.++++ ++++|+++++++++.+ ..+.+++.++ ...++++|++|||+|+|.+|++++|+|+.+|. +
T Consensus       110 ~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~  185 (337)
T cd08261         110 GVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-R  185 (337)
T ss_pred             eecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-e
Confidence            01124799999999999 9999999999998776 5677888875 77889999999999889999999999999999 7


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      |+++++++++.++++++|++++++..+.+  +.+.+.+++++ ++|++||++|+...+..++++++++ |+++.++....
T Consensus       186 v~~~~~s~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~  262 (337)
T cd08261         186 VIVVDIDDERLEFARELGADDTINVGDED--VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKG  262 (337)
T ss_pred             EEEECCCHHHHHHHHHhCCCEEecCcccC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCC
Confidence            88888899999999999999999877655  77888887776 8999999998777889999999998 99999986543


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc-c-eEEEEee
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE-S-IRCIIRM  327 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~-~-~kvvv~~  327 (329)
                      ...... ..+..+++++.+...   ...+.++++++++.++.+.+.+.+...+++++++++++.+++++ . .|+|+++
T Consensus       263 ~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         263 PVTFPD-PEFHKKELTILGSRN---ATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             CCccCH-HHHHhCCCEEEEecc---CChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            221111 122345666666532   22356888999999998765334678999999999999999873 4 5888764

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=1.6e-33  Score=255.43  Aligned_cols=284  Identities=28%  Similarity=0.450  Sum_probs=228.3

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+.+|++++.+++||+|++.+..+|+.|+.|..|.++.|......                      
T Consensus        56 ~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  113 (341)
T cd05281          56 KPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKIL----------------------  113 (341)
T ss_pred             CCCcccccceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceE----------------------
Confidence            4678999999999999999999999999999999999999999999999999753210                      


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      +....|+|++|++++++.++++|++++.+ +++++.++.++++++.  ...++|++|||.|+|.+|++++++|+.+|..+
T Consensus       114 ~~~~~g~~~~~v~v~~~~~~~lP~~~~~~-~a~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~  190 (341)
T cd05281         114 GVDTDGCFAEYVVVPEENLWKNDKDIPPE-IASIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASL  190 (341)
T ss_pred             eccCCCcceEEEEechHHcEECcCCCCHH-HhhhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence            01124799999999999999999999874 4567777888888754  45578999999988999999999999999866


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      |++++.++++.++++++|++++++..+.+  +. .++++.++ ++|++||++|+...+..++++|+++ |+++.++....
T Consensus       191 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~  266 (341)
T cd05281         191 VIASDPNPYRLELAKKMGADVVINPREED--VV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG  266 (341)
T ss_pred             EEEECCCHHHHHHHHHhCcceeeCccccc--HH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC
Confidence            88888889999999999998888765544  66 77777776 9999999998877889999999998 99999986443


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR  326 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~  326 (329)
                      .....+......++..+.+...  ....+.+.++++++.++.+.+.+.+.+.++++++++|++.+.+++..|+|++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~  340 (341)
T cd05281         267 PVDIDLNNLVIFKGLTVQGITG--RKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLY  340 (341)
T ss_pred             CcccccchhhhccceEEEEEec--CCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEec
Confidence            2222222223456667766542  1122467788999999987765667788999999999999988774488875

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=1.9e-33  Score=255.21  Aligned_cols=285  Identities=29%  Similarity=0.474  Sum_probs=231.7

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|+|++|+|+++|++++.|++||+|++.+..+|+.|+.|..|+.+.|......   |                 
T Consensus        51 ~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------------  110 (343)
T cd08235          51 LKPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKF---G-----------------  110 (343)
T ss_pred             CCCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCccee---c-----------------
Confidence            34578999999999999999999999999999999999999999999999999764321   0                 


Q ss_pred             eeccccccccccEEeeecc-----EEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGC-----VAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGAR  165 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~-----~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~  165 (329)
                        ....|+|++|+.++++.     ++++|+++++.+++.+ +++.+||+++. ..++++|++|+|+|+|.+|++++++|+
T Consensus       111 --~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~  186 (343)
T cd08235         111 --NLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAK  186 (343)
T ss_pred             --cCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence              11247999999999999     9999999999998765 78889999864 458999999999988999999999999


Q ss_pred             HcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713          166 VSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       166 ~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~  244 (329)
                      ..|++.++++++++++.+.++++|.+.++++.+.+  +.+.+++++.+ ++|+|||+++....+...+++++++ |+++.
T Consensus       187 ~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~  263 (343)
T cd08235         187 ASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEED--LVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILF  263 (343)
T ss_pred             HcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccC--HHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEE
Confidence            99994488888899999999999998888877655  77778887776 8999999998777889999999998 99999


Q ss_pred             eccCCCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEE
Q 047713          245 VGVPNKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRC  323 (329)
Q Consensus       245 ~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kv  323 (329)
                      ++........... .....++..+.+......   +.++++++++.++.+.+.+.+..+|+++++++|++.+.+++..|+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~  340 (343)
T cd08235         264 FGGLPKGSTVNIDPNLIHYREITITGSYAASP---EDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKI  340 (343)
T ss_pred             EeccCCCCCcccCHHHHhhCceEEEEEecCCh---hhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEE
Confidence            9864332111111 122346666665543222   568889999999987654456788999999999999988873377


Q ss_pred             EE
Q 047713          324 II  325 (329)
Q Consensus       324 vv  325 (329)
                      |+
T Consensus       341 vi  342 (343)
T cd08235         341 VI  342 (343)
T ss_pred             Ee
Confidence            76

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.4e-33  Score=255.66  Aligned_cols=285  Identities=25%  Similarity=0.407  Sum_probs=224.6

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|+++|+|++|+|+++|++|++|++||+|++.+..+|+.|.+|..|+.+.|......   +...              +
T Consensus        52 ~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~--------------~  114 (339)
T cd08232          52 REPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFL---GSAM--------------R  114 (339)
T ss_pred             cCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccce---eecc--------------c
Confidence            4678999999999999999999999999999999999999999999999999874211   0000              0


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      .....|+|++|+.++++.++++|+++++++++. ..+++++|+++.....+ ++++|||.|+|.+|++++|+|+.+|+.+
T Consensus       115 ~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~  192 (339)
T cd08232         115 FPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAE  192 (339)
T ss_pred             cCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence            001247999999999999999999999998765 67888999986555555 8999999988999999999999999867


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhh-cC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMT-NG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +++++.++++.++++++|++.+++..+.+  +    .++. .. ++|++||++|....++..+++|+++ |+++.++...
T Consensus       193 v~~~~~s~~~~~~~~~~g~~~vi~~~~~~--~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~  265 (339)
T cd08232         193 IVATDLADAPLAVARAMGADETVNLARDP--L----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG  265 (339)
T ss_pred             EEEECCCHHHHHHHHHcCCCEEEcCCchh--h----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC
Confidence            88888888888899999998888765432  2    2222 22 6999999998767889999999998 9999998544


Q ss_pred             CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEee
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRM  327 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~  327 (329)
                      ....... ...+.++.++.+...    ..+.++++++++.++.+.+.+.+.++|+++++++|++.+.++.. .|+|+++
T Consensus       266 ~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         266 GPVPLPL-NALVAKELDLRGSFR----FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             CCccCcH-HHHhhcceEEEEEec----CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            2211111 112456677766542    12468889999999987766667789999999999999987765 4888763

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=2e-33  Score=254.39  Aligned_cols=282  Identities=27%  Similarity=0.446  Sum_probs=232.5

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      ++|.++|+|++|+|+++|++++.+++||+|++.+..+|+.|++|..++.+.|......   |                  
T Consensus        55 ~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------------  113 (338)
T cd08254          55 KLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMP---G------------------  113 (338)
T ss_pred             CCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCcc---c------------------
Confidence            4578999999999999999999999999999999999999999999999988543211   1                  


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                       ....|+|++|+.++.+.++++|++++.+++++++.++.+||+++....+++++++|||.|+|.+|++++++|+..|+ +
T Consensus       114 -~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~  191 (338)
T cd08254         114 -LGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-A  191 (338)
T ss_pred             -cccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-E
Confidence             11247999999999999999999999999999999999999998888889999999998889999999999999999 7


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      |++++.++++.+.++++|.+.+++..+..  +...+ ....+ ++|+|+|++|....+..++++|+++ |+++.++....
T Consensus       192 V~~~~~s~~~~~~~~~~g~~~~~~~~~~~--~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~  267 (338)
T cd08254         192 VIAVDIKEEKLELAKELGADEVLNSLDDS--PKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD  267 (338)
T ss_pred             EEEEcCCHHHHHHHHHhCCCEEEcCCCcC--HHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence            99999999999999999998888766544  55555 44455 8999999998778899999999998 99999986543


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEee
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIRM  327 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~~  327 (329)
                      ...... ...+.++.++.++....   .+.+..+++++.++.+.+.   .+.+++++++++++.+.+++.. |+|+++
T Consensus       268 ~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         268 KLTVDL-SDLIARELRIIGSFGGT---PEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             CCccCH-HHHhhCccEEEEeccCC---HHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            322222 22345666777654322   2568889999999977643   4789999999999999988764 887753

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=1.5e-33  Score=258.75  Aligned_cols=295  Identities=24%  Similarity=0.322  Sum_probs=227.1

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|+++|||++|+|+++|++++.+++||+|++.+..+|+.|..|+.++.+.|.+.... ..|..+          |.+. 
T Consensus        52 ~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~-~~~~~~----------~~~~-  119 (375)
T cd08282          52 EPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPG-RAGGAY----------GYVD-  119 (375)
T ss_pred             CCCceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcc-cccccc----------cccc-
Confidence            4689999999999999999999999999999999999999999999999999752110 000000          0000 


Q ss_pred             eccccccccccEEeeec--cEEEcCCCCCcc---chhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHH
Q 047713           92 HFVGTSTFSEYTVTHVG--CVAKINPAAPLD---KVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARV  166 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~---~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~  166 (329)
                      ....+|+|+||+.+|.+  .++++|++++++   ++++++.+++|||+++ ..+++++|++|+|.|+|.+|++++|+|+.
T Consensus       120 ~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~  198 (375)
T cd08282         120 MGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAIL  198 (375)
T ss_pred             cCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence            00124799999999976  899999999998   5677888999999987 77889999999998889999999999999


Q ss_pred             cCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH-----------HHHHHHHhh
Q 047713          167 SGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ-----------AMISAFECV  235 (329)
Q Consensus       167 ~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~-----------~~~~~~~~l  235 (329)
                      .|+.+++++++++++.++++++|+. .+++.+.+  +...+.+++++++|++||++|...           .+..+++++
T Consensus       199 ~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~--~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l  275 (375)
T cd08282         199 RGASRVYVVDHVPERLDLAESIGAI-PIDFSDGD--PVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVT  275 (375)
T ss_pred             cCCCEEEEECCCHHHHHHHHHcCCe-EeccCccc--HHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHh
Confidence            9976788898999999999999984 45555433  777777776668999999998642           478899999


Q ss_pred             ccCCeEEEEeccCCCCCc-----------cccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeee
Q 047713          236 HDGWGVAVLVGVPNKDDA-----------FKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTV  303 (329)
Q Consensus       236 ~~~~G~vv~~g~~~~~~~-----------~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~  303 (329)
                      +++ |+++.++.......           ..+. ..++.++..+.+....   ..+.+..+++++.++.+.+..++.+.|
T Consensus       276 ~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~  351 (375)
T cd08282         276 RPG-GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVSHVI  351 (375)
T ss_pred             hcC-cEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEEEEe
Confidence            998 99988875322110           0011 1122344445443321   225678889999999887655578999


Q ss_pred             ecccHHHHHHHHHcCcceEEEEe
Q 047713          304 PFSEINKAFDLMLAGESIRCIIR  326 (329)
Q Consensus       304 ~l~~i~~a~~~~~~~~~~kvvv~  326 (329)
                      +++++++|++.+.+++..|+|++
T Consensus       352 ~l~~~~~a~~~~~~~~~~kvvv~  374 (375)
T cd08282         352 SLEDAPEAYARFDKRLETKVVIK  374 (375)
T ss_pred             eHHHHHHHHHHHhcCCceEEEeC
Confidence            99999999999988874488875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.6e-33  Score=252.82  Aligned_cols=285  Identities=22%  Similarity=0.381  Sum_probs=227.5

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEe-ecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVL-PVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      .++|.++|||++|+|+++|++++.|++||+|+ .....+|+.|++|..++.+.|+.....+ +              |++
T Consensus        51 ~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~  115 (337)
T cd05283          51 TKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-N--------------GKY  115 (337)
T ss_pred             CCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcc-c--------------ccc
Confidence            35689999999999999999999999999998 4445589999999999999998754321 0              110


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                      ..+....|+|+||+.++.+.++++|+++++++++.+++.+.+||+++. ...+++|++|+|.|+|.+|++++++|+.+|+
T Consensus       116 ~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~  194 (337)
T cd05283         116 PDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLK-RNGVGPGKRVGVVGIGGLGHLAVKFAKALGA  194 (337)
T ss_pred             cCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHcCC
Confidence            011223579999999999999999999999999999999999999864 4568999999998889999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                       +++.+++++++.+.++++|++.+++..+.+  +.   +. ..+++|+|||++|....+..++++++++ |+++.+|...
T Consensus       195 -~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~--~~---~~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  266 (337)
T cd05283         195 -EVTAFSRSPSKKEDALKLGADEFIATKDPE--AM---KK-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPE  266 (337)
T ss_pred             -eEEEEcCCHHHHHHHHHcCCcEEecCcchh--hh---hh-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccC
Confidence             899998999999999999998888765432  22   11 2348999999998765688999999998 9999998754


Q ss_pred             CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR  326 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~  326 (329)
                      .....+. ..++.++.++.+......   ++++++++++.++++.+  . .+.|+++++++||+.+.+++.. |+|++
T Consensus       267 ~~~~~~~-~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         267 EPLPVPP-FPLIFGRKSVAGSLIGGR---KETQEMLDFAAEHGIKP--W-VEVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             CCCccCH-HHHhcCceEEEEecccCH---HHHHHHHHHHHhCCCcc--c-eEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            3322221 223467888888776533   57888999999987643  3 3789999999999999988864 87763

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=5e-33  Score=251.97  Aligned_cols=282  Identities=27%  Similarity=0.433  Sum_probs=226.6

Q ss_pred             CCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .|.++|||++|+|+++|++++.|++||+|++.+. .+|+.|.+|..+..+.|.+...   .|+                 
T Consensus        53 ~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------  112 (338)
T PRK09422         53 TGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGY-----------------  112 (338)
T ss_pred             CCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccc---cCc-----------------
Confidence            4789999999999999999999999999997654 4799999999999999986432   111                 


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHH-cCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARV-SGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~-~G~~  170 (329)
                        ..+|+|+||+.++.++++++|++++++++++++.++.|||+++ ..+++++|++|||+|+|++|++++++|+. .|+ 
T Consensus       113 --~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-  188 (338)
T PRK09422        113 --TVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-  188 (338)
T ss_pred             --cccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-
Confidence              1247999999999999999999999999999999999999986 77889999999999999999999999998 598 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +++++++++++.+.++++|++.+++....+ ++.+.+++.++ ++|+++++.++...+..++++++.+ |+++.+|....
T Consensus       189 ~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~  265 (338)
T PRK09422        189 KVIAVDINDDKLALAKEVGADLTINSKRVE-DVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE  265 (338)
T ss_pred             eEEEEeCChHHHHHHHHcCCcEEecccccc-cHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC
Confidence            899999999999999999998888764311 26677777665 6886665556778899999999998 99999986433


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEeeC
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIRMD  328 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~~~  328 (329)
                      ..... ......+..++.++.....   +.++++++++.++.+..  .+ ..++++++++|++.+.+++.. |+++.+.
T Consensus       266 ~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        266 SMDLS-IPRLVLDGIEVVGSLVGTR---QDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             Cceec-HHHHhhcCcEEEEecCCCH---HHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence            22111 1223346677766543222   56888999999987643  34 468999999999999988765 8887653

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=4.3e-33  Score=250.97  Aligned_cols=258  Identities=14%  Similarity=0.173  Sum_probs=207.2

Q ss_pred             CCCCcccCCcceEEEEEecCCCCc-CCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTD-LQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      +.+|.++|||++|+|+++|+++++ |++||+|++.+..                                          
T Consensus        58 ~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~~------------------------------------------   95 (324)
T cd08291          58 KALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGS------------------------------------------   95 (324)
T ss_pred             CCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCCC------------------------------------------
Confidence            357899999999999999999996 9999999864210                                          


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEE-c-CCHHHHHHHHHHHHc
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF-G-LGAVGLAAAEGARVS  167 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~-G-ag~iG~aai~la~~~  167 (329)
                            +|+|+||+.+|++.++++|+++++++++++++++.|||.. ....+. ++++++|+ | +|++|++++|+|+.+
T Consensus        96 ------~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~  167 (324)
T cd08291          96 ------YGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKAD  167 (324)
T ss_pred             ------CCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHc
Confidence                  2699999999999999999999999999888889999754 455555 56667665 4 599999999999999


Q ss_pred             CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          168 GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       168 G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+ +|+++++++++.++++++|+++++++.+.+  +.+.+++++.+ ++|+|||++|.. .....+++++++ |+++.+|
T Consensus       168 G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g  242 (324)
T cd08291         168 GI-KVINIVRRKEQVDLLKKIGAEYVLNSSDPD--FLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYG-STLYVYG  242 (324)
T ss_pred             CC-EEEEEeCCHHHHHHHHHcCCcEEEECCCcc--HHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCC-CEEEEEE
Confidence            99 789998999999999999999999877655  88888888877 899999999874 567789999998 9999998


Q ss_pred             cCCCCCcccc-ccccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-e
Q 047713          247 VPNKDDAFKT-HPMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-I  321 (329)
Q Consensus       247 ~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~  321 (329)
                      .......... ....+.+++++.++....+..   .+.++++++++. +.  ++++++++|+|+|+++|++.+.+++. +
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~i~~~~~l~~~~~a~~~~~~~~~~G  319 (324)
T cd08291         243 YLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TE--LKTTFASRYPLALTLEAIAFYSKNMSTG  319 (324)
T ss_pred             ecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cc--cccceeeEEcHHHHHHHHHHHHhCCCCC
Confidence            6543321112 223456888998887655432   135667788877 54  45678899999999999999988765 5


Q ss_pred             EEEEe
Q 047713          322 RCIIR  326 (329)
Q Consensus       322 kvvv~  326 (329)
                      |++|.
T Consensus       320 kvv~~  324 (324)
T cd08291         320 KKLLI  324 (324)
T ss_pred             eEEeC
Confidence            88763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1e-32  Score=250.29  Aligned_cols=282  Identities=28%  Similarity=0.467  Sum_probs=232.3

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecC-CCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVF-TGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ++|.++|+|++|+|+++|++++.+++||+|+..+ ..+|+.|.+|..++.+.|.+....   |                 
T Consensus        55 ~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------------  114 (341)
T cd08297          55 KLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS---G-----------------  114 (341)
T ss_pred             CCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCcccc---c-----------------
Confidence            4577899999999999999999999999999865 468999999999999999875321   1                 


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                        ....|++++|+.++++.++++|++++++++++++..+.|||.++.. .+++++++|||+|+ +.+|++++++|+.+|+
T Consensus       115 --~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~  191 (341)
T cd08297         115 --YTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL  191 (341)
T ss_pred             --cccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC
Confidence              1224799999999999999999999999999999999999998655 58999999999987 7799999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|++++.++++.+.++++|++.+++..+.+  +.+.+.+++++ ++|++||+.++...+..++++++++ |+++.++..
T Consensus       192 -~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~  267 (341)
T cd08297         192 -RVIAIDVGDEKLELAKELGADAFVDFKKSD--DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLP  267 (341)
T ss_pred             -eEEEEeCCHHHHHHHHHcCCcEEEcCCCcc--HHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCC
Confidence             899998999999999999999888876654  77888888766 8999999888778899999999998 999999864


Q ss_pred             CCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713          249 NKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR  326 (329)
Q Consensus       249 ~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~  326 (329)
                      .... .... .....++.++.+......   +.++.+++++.++.+.+  .+ ..|++++++++++.+..++.. |++++
T Consensus       268 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~  340 (341)
T cd08297         268 PGGF-IPLDPFDLVLRGITIVGSLVGTR---QDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVD  340 (341)
T ss_pred             CCCC-CCCCHHHHHhcccEEEEeccCCH---HHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEe
Confidence            4221 1222 122356777776543322   56888999999987743  33 679999999999999987764 88876


Q ss_pred             e
Q 047713          327 M  327 (329)
Q Consensus       327 ~  327 (329)
                      +
T Consensus       341 ~  341 (341)
T cd08297         341 F  341 (341)
T ss_pred             C
Confidence            4

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.8e-33  Score=251.35  Aligned_cols=267  Identities=24%  Similarity=0.326  Sum_probs=213.3

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++++.|++||+|++.+..+|+.|++|+.|+++.|++...+   |                  
T Consensus        53 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---~------------------  111 (325)
T cd08264          53 PMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGII---G------------------  111 (325)
T ss_pred             CCCeecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCcccee---e------------------
Confidence            3578999999999999999999999999999999999999999999999999874321   1                  


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                       ....|+|++|+.++++.++++|+++++++++.+++++.+||+++.. .++++|++|+|+|+ |++|++++++|+.+|+ 
T Consensus       112 -~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-  188 (325)
T cd08264         112 -VVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA-  188 (325)
T ss_pred             -ccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-
Confidence             1124799999999999999999999999999999999999998654 88999999999987 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|++++    +.+.++++|++.+++..+    ..+.+++++ +++|+|+|++|. ..+..++++++++ |+++.++....
T Consensus       189 ~v~~~~----~~~~~~~~g~~~~~~~~~----~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~  257 (325)
T cd08264         189 EVIAVS----RKDWLKEFGADEVVDYDE----VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLTG  257 (325)
T ss_pred             eEEEEe----HHHHHHHhCCCeeecchH----HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCC
Confidence            677765    236678899988876543    345566665 679999999986 6889999999998 99999986422


Q ss_pred             CCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce
Q 047713          251 DDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI  321 (329)
Q Consensus       251 ~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~  321 (329)
                      .. .... ...+.++.++.+...+..   +.++++++++...+    ..+.+.|+++++++|++.+.+++..
T Consensus       258 ~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~----~~~~~~~~~~~~~~a~~~~~~~~~~  321 (325)
T cd08264         258 GE-VKLDLSDLYSKQISIIGSTGGTR---KELLELVKIAKDLK----VKVWKTFKLEEAKEALKELFSKERD  321 (325)
T ss_pred             CC-CccCHHHHhhcCcEEEEccCCCH---HHHHHHHHHHHcCC----ceeEEEEcHHHHHHHHHHHHcCCCc
Confidence            11 1111 122345666666544332   56888888885332    2356889999999999999877654

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=7.8e-33  Score=251.40  Aligned_cols=260  Identities=18%  Similarity=0.223  Sum_probs=200.0

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|+++|||++|+|+++|++|+.|++||+|+..                                              
T Consensus        66 ~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------   99 (345)
T cd08293          66 APWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF----------------------------------------------   99 (345)
T ss_pred             CCccCCCceEeeEEEEEeccCCCCCCCCCEEEec----------------------------------------------
Confidence            3568899999999999999999999999999843                                              


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccc----hhcccccccchhhhhhhccCCCCC--CeEEEEcC-CHHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDK----VCVLSCGISTGFGATVNVAKPKKG--QSVAIFGL-GAVGLAAAEG  163 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga-g~iG~aai~l  163 (329)
                           .++|+||+++|++.++++|+.+++++    +++++.++.|||+++.+..++++|  ++|||+|+ |++|++++|+
T Consensus       100 -----~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiql  174 (345)
T cd08293         100 -----NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQI  174 (345)
T ss_pred             -----CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHH
Confidence                 13799999999999999999865443    456788899999998777888877  99999987 9999999999


Q ss_pred             HHHcCCCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEE
Q 047713          164 ARVSGASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA  242 (329)
Q Consensus       164 a~~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~v  242 (329)
                      |+.+|+.+|+++++++++.+++++ +|++.++++.+.+  +.+.+++++++++|+|||++|+. .+..++++++++ |++
T Consensus       175 Ak~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~--~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~-G~i  250 (345)
T cd08293         175 GRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDN--VAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNEN-SHI  250 (345)
T ss_pred             HHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCC--HHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccC-CEE
Confidence            999998568999899999998876 9999999877655  88888887766899999999874 578999999998 999


Q ss_pred             EEeccCCCC---Ccc--cccc--cccc--ccceEEEeeecCCCC--CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHH
Q 047713          243 VLVGVPNKD---DAF--KTHP--MNLL--NERTLKGTFFGNYKP--RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA  311 (329)
Q Consensus       243 v~~g~~~~~---~~~--~~~~--~~~~--~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a  311 (329)
                      +.+|.....   ...  ....  ..+.  ++.++.......+..  .+.++++++++.++.+.+.  ....++++++++|
T Consensus       251 v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A  328 (345)
T cd08293         251 ILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEA  328 (345)
T ss_pred             EEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHH
Confidence            999853211   000  0100  0111  233332222111110  1235677888999987644  3456799999999


Q ss_pred             HHHHHcCcc-eEEEEee
Q 047713          312 FDLMLAGES-IRCIIRM  327 (329)
Q Consensus       312 ~~~~~~~~~-~kvvv~~  327 (329)
                      ++.+.+++. .|+|+++
T Consensus       329 ~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         329 FQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHhcCCCCCeEEEEC
Confidence            999988875 4888864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=6e-33  Score=251.00  Aligned_cols=277  Identities=22%  Similarity=0.385  Sum_probs=225.7

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      ++|.++|+|++|+|+++|++++.+++||+|++.+..+|+.|.+|..|+++.|.....+                      
T Consensus        53 ~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  110 (334)
T PRK13771         53 KYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGY----------------------  110 (334)
T ss_pred             CCCeeccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCcccccc----------------------
Confidence            5678999999999999999999999999999988889999999999999999875431                      


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                      +....|+|++|+.++.+.++++|+++++.+++.+++++.++|+++... .++++++|+|+|+ |.+|++++++|+.+|+ 
T Consensus       111 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-  188 (334)
T PRK13771        111 GEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-  188 (334)
T ss_pred             ccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-
Confidence            111247999999999999999999999999999999999999987554 8899999999987 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +++++++++++.+.++++ ++.+++..  +  +...++++  +++|++||++|. ..+..++++++++ |+++.+|....
T Consensus       189 ~vi~~~~~~~~~~~~~~~-~~~~~~~~--~--~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~  259 (334)
T PRK13771        189 KVIAVTSSESKAKIVSKY-ADYVIVGS--K--FSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMG-GKIIQIGNVDP  259 (334)
T ss_pred             EEEEEeCCHHHHHHHHHH-HHHhcCch--h--HHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcC-CEEEEEeccCC
Confidence            788888889999998888 66666543  2  55556654  369999999986 5678999999998 99999987543


Q ss_pred             CCc--cccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEee
Q 047713          251 DDA--FKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRM  327 (329)
Q Consensus       251 ~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~  327 (329)
                      ...  ..... .+.++.++.+...   ..+++++.+++++.++.+.  +.+.+.|+++++++|++.+.++.. .|+++..
T Consensus       260 ~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        260 SPTYSLRLGY-IILKDIEIIGHIS---ATKRDVEEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             CCCcccCHHH-HHhcccEEEEecC---CCHHHHHHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            222  11112 2456777777532   2235688899999998764  346789999999999999987765 4888764

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=2.5e-32  Score=247.91  Aligned_cols=286  Identities=27%  Similarity=0.467  Sum_probs=229.0

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|++++.|++||+|++.+..+|++|++|..+.+..|+.-..                      .
T Consensus        51 ~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~  108 (343)
T cd08236          51 HPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDY----------------------I  108 (343)
T ss_pred             CCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcce----------------------E
Confidence            457899999999999999999999999999999999999999999999999876211                      0


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      +....|+|++|+.+|++.++++|+++++++++.+ .++++||+++. ...++++++|+|+|+|.+|++++|+|+.+|+++
T Consensus       109 ~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~  186 (343)
T cd08236         109 GSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKR  186 (343)
T ss_pred             ecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence            1113579999999999999999999999998877 67889999864 778999999999988999999999999999954


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +++++.++++.+.++++|++.+++..+..   ...++...++ ++|++||++|....+..++++|+++ |+++.++....
T Consensus       187 v~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~  262 (343)
T cd08236         187 VIAVDIDDEKLAVARELGADDTINPKEED---VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYG  262 (343)
T ss_pred             EEEEcCCHHHHHHHHHcCCCEEecCcccc---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCC
Confidence            88888888999999999998888765432   4556666666 8999999998777889999999998 99999986543


Q ss_pred             CCccccc--cccccccceEEEeeecCCC--CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHc-Ccce-EEE
Q 047713          251 DDAFKTH--PMNLLNERTLKGTFFGNYK--PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLA-GESI-RCI  324 (329)
Q Consensus       251 ~~~~~~~--~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~-~~~~-kvv  324 (329)
                      .......  ...+.++.++.+.......  ..+.++++++++.++.+.+.+.+.+.+++++++++++.+.+ +... |+|
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v  342 (343)
T cd08236         263 DVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVL  342 (343)
T ss_pred             CcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEe
Confidence            2111111  1123567777776653221  13567888999999887544456789999999999999988 4444 665


Q ss_pred             E
Q 047713          325 I  325 (329)
Q Consensus       325 v  325 (329)
                      +
T Consensus       343 ~  343 (343)
T cd08236         343 L  343 (343)
T ss_pred             C
Confidence            3

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.9e-32  Score=245.05  Aligned_cols=269  Identities=23%  Similarity=0.352  Sum_probs=216.2

Q ss_pred             CCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceee
Q 047713           13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYH   92 (329)
Q Consensus        13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~   92 (329)
                      +|.++|+|++|+|+++|++   +++||+|...+..+|+.|.+|..|.++.|......   ++                  
T Consensus        50 ~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------  105 (319)
T cd08242          50 FPGVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVL---GI------------------  105 (319)
T ss_pred             CCCccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCccc---Cc------------------
Confidence            5789999999999999998   67999999999999999999999999988874431   00                  


Q ss_pred             ccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEE
Q 047713           93 FVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRI  172 (329)
Q Consensus        93 ~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~v  172 (329)
                      ....|+|++|+.++.++++++|++++.++++.+ ..++++|.. ....++++|++|||+|+|.+|++++|+|+.+|+ ++
T Consensus       106 ~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~-~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~v  182 (319)
T cd08242         106 VDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEI-LEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DV  182 (319)
T ss_pred             cCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eE
Confidence            012479999999999999999999999887753 445566654 577889999999999889999999999999999 68


Q ss_pred             EEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCC
Q 047713          173 IGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD  252 (329)
Q Consensus       173 v~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~  252 (329)
                      ++++.++++.++++++|++.+++..+.          ..++++|++||++|....+..++++++++ |+++..+......
T Consensus       183 i~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~  251 (319)
T cd08242         183 VLVGRHSEKLALARRLGVETVLPDEAE----------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAGPA  251 (319)
T ss_pred             EEEcCCHHHHHHHHHcCCcEEeCcccc----------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCC
Confidence            889889999999999999887765321          12238999999998877889999999998 9999876533322


Q ss_pred             ccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEe
Q 047713          253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR  326 (329)
Q Consensus       253 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~  326 (329)
                      .... .....++.++.+...      ..++++++++.++.+++.+.+.+.|+++++++|++.+.++...|++++
T Consensus       252 ~~~~-~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~  318 (319)
T cd08242         252 SFDL-TKAVVNEITLVGSRC------GPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLR  318 (319)
T ss_pred             ccCH-HHheecceEEEEEec------ccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeC
Confidence            2221 123456777776543      237889999999988666667899999999999999987766788875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3e-32  Score=246.66  Aligned_cols=282  Identities=22%  Similarity=0.384  Sum_probs=229.7

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++++.|++||+|++.+..+|+.|.+|..+.++.|+.....   |                  
T Consensus        56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g------------------  114 (342)
T cd08266          56 PLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGIL---G------------------  114 (342)
T ss_pred             CCCeecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhcccccccccccccc---c------------------
Confidence            4588999999999999999999999999999999999999999999999999863210   0                  


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                       ....|++++|+.++.+.++++|+.+++++++.+++++.++++++....++.++++++|+|+ +.+|++++++++..|+ 
T Consensus       115 -~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-  192 (342)
T cd08266         115 -EHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-  192 (342)
T ss_pred             -cccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-
Confidence             1124789999999999999999999999999999999999998878888999999999987 7999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +++.++.++++.+.+++++.+.+++..+.+  +...+.+.+.+ ++|++++++|. ..+...+++++++ |+++.++...
T Consensus       193 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~  268 (342)
T cd08266         193 TVIATAGSEDKLERAKELGADYVIDYRKED--FVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATT  268 (342)
T ss_pred             EEEEEeCCHHHHHHHHHcCCCeEEecCChH--HHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCC
Confidence            788888888888888888887777654433  66666766665 89999999976 5788899999998 9999998654


Q ss_pred             CCCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713          250 KDDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR  326 (329)
Q Consensus       250 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~  326 (329)
                      ... ..... ..+.++.++.+......   ..+.++++++.++.+.  +.+.+.|+++++++|++.+.++... |++++
T Consensus       269 ~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  341 (342)
T cd08266         269 GYE-APIDLRHVFWRQLSILGSTMGTK---AELDEALRLVFRGKLK--PVIDSVFPLEEAAEAHRRLESREQFGKIVLT  341 (342)
T ss_pred             CCC-CCcCHHHHhhcceEEEEEecCCH---HHHHHHHHHHHcCCcc--cceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence            321 11121 23456777776654332   4677888999888654  3467899999999999999877654 88775

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=3.3e-32  Score=245.30  Aligned_cols=253  Identities=17%  Similarity=0.263  Sum_probs=203.2

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      ..|.++|.|++|+|+++|+   .|++||||+..                                               
T Consensus        56 ~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-----------------------------------------------   85 (325)
T TIGR02825        56 EGDTMMGQQVARVVESKNV---ALPKGTIVLAS-----------------------------------------------   85 (325)
T ss_pred             CCCcEecceEEEEEEeCCC---CCCCCCEEEEe-----------------------------------------------
Confidence            3578999999999999874   59999999853                                               


Q ss_pred             eccccccccccEEeeeccEEEc----CCCCCccch-hcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHH
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKI----NPAAPLDKV-CVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGAR  165 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~----p~~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~  165 (329)
                           ++|++|+.++.+.+.++    |++++++++ +++++++.|||+++....++++|++|||+|+ |++|++++|+|+
T Consensus        86 -----~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk  160 (325)
T TIGR02825        86 -----PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAK  160 (325)
T ss_pred             -----cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHH
Confidence                 36899999999988887    899999987 6899999999999888899999999999985 999999999999


Q ss_pred             HcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713          166 VSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       166 ~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      ..|+ +|+++++++++.++++++|++.++++.+.+ .+.+.++...++++|+|||++|+ ..+..++++++++ |+++.+
T Consensus       161 ~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~-~~~~~~~~~~~~gvdvv~d~~G~-~~~~~~~~~l~~~-G~iv~~  236 (325)
T TIGR02825       161 LKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTVK-SLEETLKKASPDGYDCYFDNVGG-EFSNTVIGQMKKF-GRIAIC  236 (325)
T ss_pred             HcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccccc-cHHHHHHHhCCCCeEEEEECCCH-HHHHHHHHHhCcC-cEEEEe
Confidence            9999 789888999999999999999999876532 25566666655589999999986 5679999999998 999999


Q ss_pred             ccCCCCC---ccc---cccccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHH
Q 047713          246 GVPNKDD---AFK---THPMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLML  316 (329)
Q Consensus       246 g~~~~~~---~~~---~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~  316 (329)
                      |......   ..+   .....+.+++++.++....+..   .+.++++++++.++++.+.  +...|+++++++|++.++
T Consensus       237 G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~  314 (325)
T TIGR02825       237 GAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGML  314 (325)
T ss_pred             cchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHh
Confidence            8643211   111   1122345677777765433221   1357789999999987654  446789999999999999


Q ss_pred             cCcce-EEEE
Q 047713          317 AGESI-RCII  325 (329)
Q Consensus       317 ~~~~~-kvvv  325 (329)
                      +++.. |+|+
T Consensus       315 ~~~~~gkvVv  324 (325)
T TIGR02825       315 KGENLGKTIV  324 (325)
T ss_pred             cCCCCCeEEe
Confidence            88764 7776

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.4e-31  Score=241.95  Aligned_cols=281  Identities=27%  Similarity=0.442  Sum_probs=225.5

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|++++.+++||+|++.+...|+.|.+|..++.+.|......                      
T Consensus        51 ~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  108 (334)
T cd08234          51 APPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAV----------------------  108 (334)
T ss_pred             CCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCccee----------------------
Confidence            4788999999999999999999999999999999999999999999999988764210                      


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      +....|+|++|+.++++.++++|+++++.+++.+ .++.++++++ ..+++++|++|||+|+|.+|++++++|+..|+++
T Consensus       109 ~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~  186 (334)
T cd08234         109 GVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASR  186 (334)
T ss_pred             ccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence            0112479999999999999999999999988765 7788898886 7789999999999988999999999999999955


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      ++++++++++.+.++++|++.+++..+.+  +... +...++++|++||++|....+..++++++++ |+++.++.....
T Consensus       187 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~  262 (334)
T cd08234         187 VTVAEPNEEKLELAKKLGATETVDPSRED--PEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPD  262 (334)
T ss_pred             EEEECCCHHHHHHHHHhCCeEEecCCCCC--HHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCC
Confidence            88888899999999999998887765544  4433 3333338999999998777889999999998 999999865432


Q ss_pred             Cccccccc-cccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEE
Q 047713          252 DAFKTHPM-NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCII  325 (329)
Q Consensus       252 ~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv  325 (329)
                      ........ .+.++.++.+....    .+.++++++++.++.+.+.+.+.+++++++++++++.+.+ +. .|+|+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         263 ARVSISPFEIFQKELTIIGSFIN----PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             CCcccCHHHHHhCCcEEEEeccC----HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            22222221 12356677665432    2468889999999987665556788999999999999988 54 47765

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.3e-32  Score=243.13  Aligned_cols=277  Identities=27%  Similarity=0.478  Sum_probs=222.0

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|++++.|++||+|++.+..+|+.|.+|..++++.|.+. .  +.|                  
T Consensus        53 ~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~------------------  111 (332)
T cd08259          53 KYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNR-A--EYG------------------  111 (332)
T ss_pred             CCCeeccccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCc-c--ccc------------------
Confidence            4578999999999999999999999999999998899999999999999999864 1  111                  


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                       ....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.. ..+++++++||+|+ |.+|++++++++..|. 
T Consensus       112 -~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-  188 (332)
T cd08259         112 -EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-  188 (332)
T ss_pred             -cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-
Confidence             1225799999999999999999999999999999999999998766 88999999999986 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      .++++++++++.+.+++++.+.+++..+    +.+.+.+..  ++|++++++|. .....++++++++ |+++.++....
T Consensus       189 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~g~~~~  260 (332)
T cd08259         189 RVIAVTRSPEKLKILKELGADYVIDGSK----FSEDVKKLG--GADVVIELVGS-PTIEESLRSLNKG-GRLVLIGNVTP  260 (332)
T ss_pred             eEEEEeCCHHHHHHHHHcCCcEEEecHH----HHHHHHhcc--CCCEEEECCCh-HHHHHHHHHhhcC-CEEEEEcCCCC
Confidence            7888888888888888898877765432    444454443  69999999976 4578889999998 99999986443


Q ss_pred             CCcc-ccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713          251 DDAF-KTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR  326 (329)
Q Consensus       251 ~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~  326 (329)
                      .... ... ....++.++.+...   .....++++++++.++.+.  +.+.+.|+++++++|++.+.+++.. |++++
T Consensus       261 ~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         261 DPAPLRPG-LLILKEIRIIGSIS---ATKADVEEALKLVKEGKIK--PVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             CCcCCCHH-HHHhCCcEEEEecC---CCHHHHHHHHHHHHcCCCc--cceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            2211 111 11245666665532   1225678889999888764  3467899999999999999987764 77763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=1.2e-31  Score=241.49  Aligned_cols=257  Identities=19%  Similarity=0.274  Sum_probs=210.3

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++|+.|++||+|++.+.                                            
T Consensus        56 ~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~--------------------------------------------   91 (324)
T cd08292          56 PELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPV--------------------------------------------   91 (324)
T ss_pred             CCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEeccC--------------------------------------------
Confidence            456899999999999999999999999999986521                                            


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                           .|+|++|+.+++..++++|+++++++++.+++++.++|+++ ...++++|++|||+|+ |.+|++++++|+.+|+
T Consensus        92 -----~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~  165 (324)
T cd08292          92 -----HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI  165 (324)
T ss_pred             -----CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC
Confidence                 26999999999999999999999999999999899999875 5688999999999976 9999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +++++..++++.+.++++|++.+++..+.+  +.+.+++++.+ ++|+|||++|. .....++++++++ |+++.+|..
T Consensus       166 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-g~~v~~g~~  240 (324)
T cd08292         166 -NVINLVRRDAGVAELRALGIGPVVSTEQPG--WQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEG-GTLVSFGSM  240 (324)
T ss_pred             -eEEEEecCHHHHHHHHhcCCCEEEcCCCch--HHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCC-cEEEEEecC
Confidence             778887888888888889998888776544  78888888887 99999999987 5778899999998 999999864


Q ss_pred             CCCCccccc-cccccccceEEEeeecCCCC-------CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc
Q 047713          249 NKDDAFKTH-PMNLLNERTLKGTFFGNYKP-------RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES  320 (329)
Q Consensus       249 ~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~-------~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~  320 (329)
                      ... ..... ...+.++.++.+.....+..       .+.+..+++++.++.+.+.  +.+.|+++++++|++.+.+++.
T Consensus       241 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~  317 (324)
T cd08292         241 SGE-PMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGR  317 (324)
T ss_pred             CCC-CCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCC
Confidence            322 11222 11345788888876543221       1357778899999977643  3678999999999999887665


Q ss_pred             e-EEEE
Q 047713          321 I-RCII  325 (329)
Q Consensus       321 ~-kvvv  325 (329)
                      . |+++
T Consensus       318 ~~kvvv  323 (324)
T cd08292         318 AGKVLL  323 (324)
T ss_pred             CceEEe
Confidence            4 7775

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.6e-32  Score=244.66  Aligned_cols=272  Identities=23%  Similarity=0.274  Sum_probs=214.0

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ..++|.++|||++|+|+++|++++.|++||+|++.+..+|+.|..|..     |...                       
T Consensus        74 ~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~~-----------------------  125 (350)
T cd08274          74 TLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----IDYI-----------------------  125 (350)
T ss_pred             CCCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cccc-----------------------
Confidence            346789999999999999999999999999999988888888776421     2110                       


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G  168 (329)
                        +...+|+|++|+.++...++++|+++++.+++++++++.+||+++ ...++++|++|||+|+ |.+|++++++|+.+|
T Consensus       126 --~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g  202 (350)
T cd08274         126 --GSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRG  202 (350)
T ss_pred             --CCCCCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcC
Confidence              001137999999999999999999999999999999999999986 7788999999999987 999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      + ++++++.++ +.+.++++|++.+++..+..  +..  ...+.+ ++|+|||++|. ..++.++++++++ |+++.+|.
T Consensus       203 ~-~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~--~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~  274 (350)
T cd08274         203 A-IVIAVAGAA-KEEAVRALGADTVILRDAPL--LAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGA  274 (350)
T ss_pred             C-EEEEEeCch-hhHHHHhcCCeEEEeCCCcc--HHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecc
Confidence            9 677776655 78888999987665543332  333  444455 89999999986 5789999999998 99999986


Q ss_pred             CCCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713          248 PNKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII  325 (329)
Q Consensus       248 ~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv  325 (329)
                      ..... .... ..++.++.++.++.....   +.+.++++++.++.+.  +++.+.|+++++++|++.+..++.. |+|+
T Consensus       275 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi  348 (350)
T cd08274         275 IAGPV-VELDLRTLYLKDLTLFGSTLGTR---EVFRRLVRYIEEGEIR--PVVAKTFPLSEIREAQAEFLEKRHVGKLVL  348 (350)
T ss_pred             cCCcc-ccCCHHHhhhcceEEEEeecCCH---HHHHHHHHHHHCCCcc--cccccccCHHHHHHHHHHHhcCCCceEEEE
Confidence            43221 1222 222567778887765322   5688899999998764  3467889999999999999877654 7776


Q ss_pred             e
Q 047713          326 R  326 (329)
Q Consensus       326 ~  326 (329)
                      +
T Consensus       349 ~  349 (350)
T cd08274         349 V  349 (350)
T ss_pred             e
Confidence            5

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.2e-31  Score=242.11  Aligned_cols=270  Identities=26%  Similarity=0.344  Sum_probs=217.9

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .+|.++|||++|+|+++|+++.++++||+|++.+. .+|+.|.+|..++.++|......   |+                
T Consensus        57 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----------------  117 (329)
T cd08298          57 KLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT---GY----------------  117 (329)
T ss_pred             CCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc---cc----------------
Confidence            56889999999999999999999999999987655 58999999999999999865421   11                


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                         ..+|+|++|+.++.+.++++|+++++.+++++++++.+||+++ +.++++++++|+|+|+|.+|++++++|+..|. 
T Consensus       118 ---~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-  192 (329)
T cd08298         118 ---TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-  192 (329)
T ss_pred             ---ccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-
Confidence               1247899999999999999999999999999999999999987 88999999999999999999999999999998 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|++++.++++.+.++++|++..++..+.           ..+++|+++++.+....++.++++++++ |+++.++....
T Consensus       193 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~  260 (329)
T cd08298         193 EVFAFTRSGEHQELARELGADWAGDSDDL-----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS  260 (329)
T ss_pred             eEEEEcCChHHHHHHHHhCCcEEeccCcc-----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC
Confidence            88888889999999999999877765432           1237999999877778899999999998 99998874321


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEE
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCI  324 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvv  324 (329)
                      . ........+.++..+.+.....   .+.++++++++.++.+.+   ..+.|+++++++|++.+++++.. |+|
T Consensus       261 ~-~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v  328 (329)
T cd08298         261 D-IPAFDYELLWGEKTIRSVANLT---RQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAV  328 (329)
T ss_pred             C-CCccchhhhhCceEEEEecCCC---HHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceee
Confidence            1 1111111233455555544221   245778889998887654   35889999999999999987765 655

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=2.2e-31  Score=240.46  Aligned_cols=277  Identities=26%  Similarity=0.430  Sum_probs=221.4

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .+|.++|+|++|+|+++|++++.|++||+|++.+. .+|++|++|..++++.|.+....   +                 
T Consensus        52 ~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------------  111 (330)
T cd08245          52 KYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNT---G-----------------  111 (330)
T ss_pred             CCCcccCccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCcccc---C-----------------
Confidence            56889999999999999999999999999987554 67999999999999999984321   1                 


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                        ....|+|++|+.+++++++++|+++++++++.+++.+.+||.++.. .+++++++|||+|+|.+|++++++|+.+|. 
T Consensus       112 --~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-  187 (330)
T cd08245         112 --YTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-  187 (330)
T ss_pred             --cccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-
Confidence              1124799999999999999999999999999999999999998644 789999999999888899999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|+++++++++.+.++++|++.+++.....  ....    ..+++|++||+++.......++++++++ |+++.++....
T Consensus       188 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~  260 (330)
T cd08245         188 ETVAITRSPDKRELARKLGADEVVDSGAEL--DEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPES  260 (330)
T ss_pred             EEEEEeCCHHHHHHHHHhCCcEEeccCCcc--hHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCC
Confidence            789988999999999999988887654432  2222    2247999999988778889999999998 99999986432


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII  325 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv  325 (329)
                      .........++.++.++.+...+..   ..++.+++++.++.+.+   ..+.|++++++++++.+.+++.. |+|+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         261 PPFSPDIFPLIMKRQSIAGSTHGGR---ADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             CccccchHHHHhCCCEEEEeccCCH---HHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            2111111223456677776654332   46778889998887753   34789999999999999887765 6553

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.3e-31  Score=242.64  Aligned_cols=258  Identities=19%  Similarity=0.266  Sum_probs=205.0

Q ss_pred             CCCcccCCcc--eEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           12 LFPRIFGHEA--GGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        12 ~~P~~~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      .+|+++|+++  .|++..+|++++.|++||+|+..                                             
T Consensus        66 ~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~~---------------------------------------------  100 (338)
T cd08295          66 LPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGF---------------------------------------------  100 (338)
T ss_pred             CCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEec---------------------------------------------
Confidence            4688999854  45666688999999999999843                                             


Q ss_pred             eeeccccccccccEEeee-ccEEEcC-CCCCcc-chhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHH
Q 047713           90 IYHFVGTSTFSEYTVTHV-GCVAKIN-PAAPLD-KVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGAR  165 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~-~~~~~~p-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~  165 (329)
                             |+|+||+++|+ ..++++| +.+++. +++++++++.|||+++....++++|++|||+|+ |++|++++|+|+
T Consensus       101 -------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk  173 (338)
T cd08295         101 -------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAK  173 (338)
T ss_pred             -------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHH
Confidence                   58999999999 7999995 678876 789999999999999878889999999999987 999999999999


Q ss_pred             HcCCCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713          166 VSGASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       166 ~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~  244 (329)
                      .+|+ +|+++++++++.+++++ +|++.++++.+.+ ++.+.+++.+++++|+|||++|+ ..+..++++++++ |+++.
T Consensus       174 ~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~-~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~  249 (338)
T cd08295         174 LKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKEEP-DLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAA  249 (338)
T ss_pred             HcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCCcc-cHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEE
Confidence            9999 78888889999999988 9999998865431 27777777765689999999986 6889999999998 99999


Q ss_pred             eccCCCCCcc-----ccccccccccceEEEeeecCCCC--CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHc
Q 047713          245 VGVPNKDDAF-----KTHPMNLLNERTLKGTFFGNYKP--RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLA  317 (329)
Q Consensus       245 ~g~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~  317 (329)
                      +|........     ......+.+++++.++....+..  .+.++++++++.++.+++.  +...|+++++++|++.+++
T Consensus       250 ~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~  327 (338)
T cd08295         250 CGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFT  327 (338)
T ss_pred             ecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhc
Confidence            9864332110     01122345677777765443321  1236778899999977653  4466999999999999988


Q ss_pred             Ccc-eEEEEee
Q 047713          318 GES-IRCIIRM  327 (329)
Q Consensus       318 ~~~-~kvvv~~  327 (329)
                      ++. +|+|+++
T Consensus       328 ~~~~GkvVl~~  338 (338)
T cd08295         328 GSNIGKQVVKV  338 (338)
T ss_pred             CCCCceEEEEC
Confidence            876 4888864

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=3.9e-31  Score=220.25  Aligned_cols=271  Identities=22%  Similarity=0.319  Sum_probs=211.0

Q ss_pred             CcCCCCCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCcccc
Q 047713            4 DKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRF   83 (329)
Q Consensus         4 ~~~~~~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~   83 (329)
                      .+.+...|++|.+-|+|++|+|+.+|++++.|++||+|+.....                                    
T Consensus        68 QGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a~------------------------------------  111 (354)
T KOG0025|consen   68 QGVYPVRPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSAN------------------------------------  111 (354)
T ss_pred             ccccCCCCCCCcccCCcceEEEEEecCCcCccCCCCeEeecCCC------------------------------------
Confidence            34455667899999999999999999999999999999965322                                    


Q ss_pred             ccCCCceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHH
Q 047713           84 SIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAE  162 (329)
Q Consensus        84 ~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~  162 (329)
                                  .|+|++|.+.+++.++++++.++++.||++...-.|||+.|....++.+||+|+-.|+ +.+|++.+|
T Consensus       112 ------------lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQ  179 (354)
T KOG0025|consen  112 ------------LGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQ  179 (354)
T ss_pred             ------------CccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHH
Confidence                        4899999999999999999999999999999999999999888899999999999988 999999999


Q ss_pred             HHHHcCCCEEEEEcCCh---hhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccC
Q 047713          163 GARVSGASRIIGVDLNP---SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDG  238 (329)
Q Consensus       163 la~~~G~~~vv~~~~~~---~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~  238 (329)
                      +|+++|++.+=++...+   +-.+.++.+|+++++..++..  -.+..+..... .+.+.|||+|+.+. ....+.|..+
T Consensus       180 laka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~--~~~~~k~~~~~~~prLalNcVGGksa-~~iar~L~~G  256 (354)
T KOG0025|consen  180 LAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELR--DRKMKKFKGDNPRPRLALNCVGGKSA-TEIARYLERG  256 (354)
T ss_pred             HHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhc--chhhhhhhccCCCceEEEeccCchhH-HHHHHHHhcC
Confidence            99999996554443322   233456779999999755432  11122222223 79999999998654 4556789998


Q ss_pred             CeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCC--------CHHHHHHHHHcCCCCCCcceeeeeecccHHH
Q 047713          239 WGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRS--------DLPSVVEKYMNKELEVEKFITHTVPFSEINK  310 (329)
Q Consensus       239 ~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~  310 (329)
                       |..+.+|.....+.......+++|.+++.|+++..|...+        .+.++.+++..|++...  ..+..+|++.+.
T Consensus       257 -gtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~~t  333 (354)
T KOG0025|consen  257 -GTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADHKT  333 (354)
T ss_pred             -ceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhhhH
Confidence             9999998766554433445567899999999998886432        35678888899987543  347889999999


Q ss_pred             HHHHHHcCc--ceEEEEeeC
Q 047713          311 AFDLMLAGE--SIRCIIRMD  328 (329)
Q Consensus       311 a~~~~~~~~--~~kvvv~~~  328 (329)
                      |++...+..  +.|.++.++
T Consensus       334 ald~~L~~~~~~~Kq~i~~e  353 (354)
T KOG0025|consen  334 ALDAALSKFGKSGKQIIVLE  353 (354)
T ss_pred             HHHHHHHHhccCCceEEEec
Confidence            999754433  346666653

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.6e-31  Score=241.17  Aligned_cols=254  Identities=19%  Similarity=0.277  Sum_probs=203.3

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|++   .++.|++||||+..                                               
T Consensus        58 ~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~-----------------------------------------------   87 (329)
T cd08294          58 EGDTMIGTQVAKVIES---KNSKFPVGTIVVAS-----------------------------------------------   87 (329)
T ss_pred             CCCcEecceEEEEEec---CCCCCCCCCEEEee-----------------------------------------------
Confidence            4689999999999985   45689999999843                                               


Q ss_pred             eccccccccccEEeeec---cEEEcCCCCC--c---cchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHH
Q 047713           92 HFVGTSTFSEYTVTHVG---CVAKINPAAP--L---DKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAE  162 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~---~~~~~p~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~  162 (329)
                           ++|++|+.++++   .++++|++++  +   ..+++++++++|||+++....++++|++|||+|+ |++|++++|
T Consensus        88 -----~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiq  162 (329)
T cd08294          88 -----FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQ  162 (329)
T ss_pred             -----CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHH
Confidence                 378999999999   9999999988  2   2234688899999999888889999999999985 999999999


Q ss_pred             HHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEE
Q 047713          163 GARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA  242 (329)
Q Consensus       163 la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~v  242 (329)
                      +|+.+|+ +|+++++++++.++++++|++.++++.+.+  +.+.+++.+++++|+|||++|+ ..+..++++++++ |++
T Consensus       163 lA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~--~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~i  237 (329)
T cd08294         163 IAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKTVS--LEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRV  237 (329)
T ss_pred             HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEE
Confidence            9999999 799998999999999999999999887655  7788887776689999999987 6889999999998 999


Q ss_pred             EEeccCCCCC--cc---c-cccccccccceEEEeeecCCC--CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHH
Q 047713          243 VLVGVPNKDD--AF---K-THPMNLLNERTLKGTFFGNYK--PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDL  314 (329)
Q Consensus       243 v~~g~~~~~~--~~---~-~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~  314 (329)
                      +.+|......  ..   . .....+.+++++.++....+.  ..+.++++++++.++.+.+.  ...+|+++++++|++.
T Consensus       238 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~  315 (329)
T cd08294         238 AVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIG  315 (329)
T ss_pred             EEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHH
Confidence            9998532211  01   1 112234577788776543321  11236678889999987654  3357999999999999


Q ss_pred             HHcCcc-eEEEEee
Q 047713          315 MLAGES-IRCIIRM  327 (329)
Q Consensus       315 ~~~~~~-~kvvv~~  327 (329)
                      +++++. +|+|+++
T Consensus       316 ~~~~~~~gkvvv~~  329 (329)
T cd08294         316 MLKGENTGKAIVKV  329 (329)
T ss_pred             HHcCCCCCeEEEeC
Confidence            998876 4888763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.98  E-value=2.4e-30  Score=231.11  Aligned_cols=248  Identities=25%  Similarity=0.444  Sum_probs=204.8

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .+|.++|+|++|+|+++|++++.|++||+|++.+. .+|+.|++|..+.++.|+.... .                    
T Consensus        54 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------------  112 (306)
T cd08258          54 ETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKG-I--------------------  112 (306)
T ss_pred             CCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCce-e--------------------
Confidence            45789999999999999999999999999998775 6899999999999999976321 0                    


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                       +....|+|++|+.++++.++++|+++++++++ ++.+++++|+++....+++++++|||.|+|.+|++++++|+.+|+ 
T Consensus       113 -~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-  189 (306)
T cd08258         113 -GTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-  189 (306)
T ss_pred             -eecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence             11224799999999999999999999999876 777888999998888899999999998889999999999999999 


Q ss_pred             EEEEE--cCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          171 RIIGV--DLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       171 ~vv~~--~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|+++  +.++++.+.++++|++.+ +..+.+  +...+.++..+ ++|++||++|....+...+++|+++ |+++.++.
T Consensus       190 ~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~  265 (306)
T cd08258         190 TVVVVGTEKDEVRLDVAKELGADAV-NGGEED--LAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGI  265 (306)
T ss_pred             EEEEECCCCCHHHHHHHHHhCCccc-CCCcCC--HHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcc
Confidence            67665  335567888899999877 665554  77778877766 8999999998777889999999998 99999988


Q ss_pred             CCCC-CccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcC
Q 047713          248 PNKD-DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNK  291 (329)
Q Consensus       248 ~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~  291 (329)
                      .... ..++. ..++.+++++.|+++++.   ++++++++++.+|
T Consensus       266 ~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~  306 (306)
T cd08258         266 FGPLAASIDV-ERIIQKELSVIGSRSSTP---ASWETALRLLASG  306 (306)
T ss_pred             cCCCCcccCH-HHHhhcCcEEEEEecCch---HhHHHHHHHHhcC
Confidence            5521 22222 233568999999988665   6799999988764

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=1.4e-30  Score=228.13  Aligned_cols=243  Identities=28%  Similarity=0.459  Sum_probs=199.7

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|+|++|+|+++|++++.|++||+|+..+..+|+.|++|+.    .|+.....                     
T Consensus        27 ~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~~~~~~---------------------   81 (271)
T cd05188          27 PKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCPGGGIL---------------------   81 (271)
T ss_pred             CCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCCCCCEe---------------------
Confidence            35688999999999999999999999999999999999999999997    56643321                     


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                       +....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....++++++|||+|+|.+|++++++++..|. 
T Consensus        82 -~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~-  159 (271)
T cd05188          82 -GEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-  159 (271)
T ss_pred             -ccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence             122357999999999999999999999999999999999999997777777999999999985599999999999997 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +|++++.++++.+.++++|++.+++..+.+  +...+. ...+ ++|++|++++.......++++++++ |+++.++...
T Consensus       160 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~  235 (271)
T cd05188         160 RVIVTDRSDEKLELAKELGADHVIDYKEED--LEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPG-GRIVVVGGTS  235 (271)
T ss_pred             eEEEEcCCHHHHHHHHHhCCceeccCCcCC--HHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEEccCC
Confidence            899999999999999999988888766554  555555 4444 8999999998756788999999998 9999998755


Q ss_pred             CCCccccccccccccceEEEeeecCCCCCCCHHHHHHH
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEK  287 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~  287 (329)
                      ...........+.++.++.++....+   .++++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  270 (271)
T cd05188         236 GGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL  270 (271)
T ss_pred             CCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence            44333223344678888988876544   456666654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=7.6e-30  Score=230.63  Aligned_cols=277  Identities=25%  Similarity=0.365  Sum_probs=222.0

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|+++++|++||+|++.....|+.|.+|      .|... ..                     .
T Consensus        56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~------~~~~~-~~---------------------~  107 (336)
T cd08276          56 KDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPT------AEDEA-SA---------------------L  107 (336)
T ss_pred             CCCcccccceeEEEEEeCCCCcCCCCCCEEEEeccccccccccc------ccccc-cc---------------------c
Confidence            46789999999999999999999999999998776666554433      33211 00                     0


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      +....|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.....+++|++|+|+|+|++|++++++|+..|+ +
T Consensus       108 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~  186 (336)
T cd08276         108 GGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-R  186 (336)
T ss_pred             ccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-E
Confidence            112257899999999999999999999999999999999999998777889999999999889999999999999999 7


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCC-CCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKD-YDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      |+.++.++++.+.++++|.+.+++... .+  +...+++++++ ++|++||+++. ..+..++++++++ |+++.++...
T Consensus       187 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~  262 (336)
T cd08276         187 VIATSSSDEKLERAKALGADHVINYRTTPD--WGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLS  262 (336)
T ss_pred             EEEEeCCHHHHHHHHHcCCCEEEcCCcccC--HHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCC
Confidence            888889999999999999988887655 33  77788888876 99999999974 6788999999998 9999998654


Q ss_pred             CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR  326 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~  326 (329)
                      ...........+.++.++.+...+..   +.++++++++.++.+..  ...+.+++++++++++.+.+++.. |++++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         263 GFEAPVLLLPLLTKGATLRGIAVGSR---AQFEAMNRAIEAHRIRP--VIDRVFPFEEAKEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             CCccCcCHHHHhhcceEEEEEecCcH---HHHHHHHHHHHcCCccc--ccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence            43211122333567888888775432   56888888888876643  356889999999999999877664 87775

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.97  E-value=5.6e-30  Score=232.29  Aligned_cols=259  Identities=22%  Similarity=0.318  Sum_probs=207.0

Q ss_pred             CCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceee
Q 047713           13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYH   92 (329)
Q Consensus        13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~   92 (329)
                      +|.++|||++|+|+++|+++..|++||+|++.+.                                              
T Consensus        63 ~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----------------------------------------------   96 (341)
T cd08290          63 PPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRP----------------------------------------------   96 (341)
T ss_pred             CCCCCCcceEEEEEEeCCCCCCCCCCCEEEecCC----------------------------------------------
Confidence            6789999999999999999999999999996521                                              


Q ss_pred             ccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCE
Q 047713           93 FVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASR  171 (329)
Q Consensus        93 ~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~  171 (329)
                        ..|+|++|+.++.+.++++|+++++++++++++++.|||+++.....+++|++|||+|+ |.+|++++++|+..|+ +
T Consensus        97 --~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~  173 (341)
T cd08290          97 --GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-K  173 (341)
T ss_pred             --CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-e
Confidence              13799999999999999999999999999999999999999877778999999999986 9999999999999999 6


Q ss_pred             EEEEcCCh----hhHHHHHhcCCceeeCCCCC---CchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713          172 IIGVDLNP----SRFNEAKKFGVTEFVNPKDY---DKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       172 vv~~~~~~----~~~~~~~~lg~~~~~~~~~~---~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~  244 (329)
                      ++++..++    ++.+.++++|++.+++....   +  +...++.+.++++|+|||++|.. .+...+++++++ |+++.
T Consensus       174 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~  249 (341)
T cd08290         174 TINVVRDRPDLEELKERLKALGADHVLTEEELRSLL--ATELLKSAPGGRPKLALNCVGGK-SATELARLLSPG-GTMVT  249 (341)
T ss_pred             EEEEEcCCCcchhHHHHHHhcCCCEEEeCccccccc--HHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCC-CEEEE
Confidence            66666554    67788889999998877653   3  66677766655899999999874 567789999998 99999


Q ss_pred             eccCCCCCcccccc-ccccccceEEEeeecCCCC-------CCCHHHHHHHHHcCCCCCCcceeeee---ecccHHHHHH
Q 047713          245 VGVPNKDDAFKTHP-MNLLNERTLKGTFFGNYKP-------RSDLPSVVEKYMNKELEVEKFITHTV---PFSEINKAFD  313 (329)
Q Consensus       245 ~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~-------~~~~~~~i~~~~~~~l~~~~~~~~~~---~l~~i~~a~~  313 (329)
                      ++...... ..... ..+.++.++.+.....+..       ...+..+++++.++.+.+.  ....+   +++++++|++
T Consensus       250 ~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~  326 (341)
T cd08290         250 YGGMSGQP-VTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALA  326 (341)
T ss_pred             EeccCCCC-cccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHH
Confidence            98543321 11222 2356788888876543321       0146778888888877543  34566   9999999999


Q ss_pred             HHHcCcce-EEEEee
Q 047713          314 LMLAGESI-RCIIRM  327 (329)
Q Consensus       314 ~~~~~~~~-kvvv~~  327 (329)
                      .+.+++.. |+|+.+
T Consensus       327 ~~~~~~~~~k~v~~~  341 (341)
T cd08290         327 NALKGGGGGKQVLVM  341 (341)
T ss_pred             HHhhcCCCCeEEEeC
Confidence            99887764 888764

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.97  E-value=8.2e-30  Score=229.30  Aligned_cols=258  Identities=20%  Similarity=0.289  Sum_probs=211.9

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|+|++|+|+++|++++.+++||+|++.+.                                            
T Consensus        54 ~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--------------------------------------------   89 (323)
T cd05282          54 PPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG--------------------------------------------   89 (323)
T ss_pred             CCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC--------------------------------------------
Confidence            356789999999999999999999999999996521                                            


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                           .|+|++|+.++...++++|+++++.+++.+++++.+||+++.....+.+|++|||+|+ |.+|++++++|+.+|+
T Consensus        90 -----~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~  164 (323)
T cd05282          90 -----EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF  164 (323)
T ss_pred             -----CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC
Confidence                 2689999999999999999999999999999999999998877778899999999987 9999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +++++..++++.+.++++|++.+++..+.+  +...+.+++.+ ++|+|||++|+. .....+++++++ |+++.++..
T Consensus       165 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~  239 (323)
T cd05282         165 -KTINVVRRDEQVEELKALGADEVIDSSPED--LAQRVKEATGGAGARLALDAVGGE-SATRLARSLRPG-GTLVNYGLL  239 (323)
T ss_pred             -eEEEEecChHHHHHHHhcCCCEEecccchh--HHHHHHHHhcCCCceEEEECCCCH-HHHHHHHhhCCC-CEEEEEccC
Confidence             788888888889999999999888876544  77778888777 999999999874 567889999998 999999875


Q ss_pred             CCCCcccccccccc-ccceEEEeeecCCCCC-------CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc
Q 047713          249 NKDDAFKTHPMNLL-NERTLKGTFFGNYKPR-------SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES  320 (329)
Q Consensus       249 ~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~-------~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~  320 (329)
                      ... ........+. ++.++.+.....+...       +.+..+++++.++.+.+  ...+.|+++++++|++.+.++..
T Consensus       240 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~  316 (323)
T cd05282         240 SGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTT--PVGAKFPLEDFEEAVAAAEQPGR  316 (323)
T ss_pred             CCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCccc--CccceecHHHHHHHHHHHhcCCC
Confidence            443 2222222233 7888888776554311       24667888888887653  35688999999999999988765


Q ss_pred             e-EEEE
Q 047713          321 I-RCII  325 (329)
Q Consensus       321 ~-kvvv  325 (329)
                      . |+|+
T Consensus       317 ~~kvv~  322 (323)
T cd05282         317 GGKVLL  322 (323)
T ss_pred             CceEee
Confidence            4 7765

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.97  E-value=1.5e-29  Score=227.73  Aligned_cols=260  Identities=18%  Similarity=0.248  Sum_probs=210.6

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++++.+++||+|++....                                           
T Consensus        57 ~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-------------------------------------------   93 (324)
T cd08244          57 PELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGR-------------------------------------------   93 (324)
T ss_pred             CCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccCC-------------------------------------------
Confidence            3567899999999999999999999999999965210                                           


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                          ..|+|++|+.++.++++++|+++++++++++++++.||| ++....+++++++|+|+|+ |.+|++++++|+.+|+
T Consensus        94 ----~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~  168 (324)
T cd08244          94 ----AGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA  168 (324)
T ss_pred             ----CCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Confidence                136999999999999999999999999999999999995 4677788999999999985 9999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|+++++++++.+.++++|++.+++..+.+  +...+.+++++ ++|+|+|++|.. ....++++++++ |+++.++..
T Consensus       169 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~  243 (324)
T cd08244         169 -TVVGAAGGPAKTALVRALGADVAVDYTRPD--WPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWA  243 (324)
T ss_pred             -EEEEEeCCHHHHHHHHHcCCCEEEecCCcc--HHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecC
Confidence             789998899999999999998888766554  77777777776 899999999875 568899999998 999999875


Q ss_pred             CCCCccccc-cccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EE
Q 047713          249 NKDDAFKTH-PMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RC  323 (329)
Q Consensus       249 ~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kv  323 (329)
                      ..... ... ...+.++.++.+........   .+.+.++++++.++.+.  +.+.+.|+++++++|++.+++++.. |+
T Consensus       244 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv  320 (324)
T cd08244         244 SGEWT-ALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLV--PVVGQTFPLERAAEAHAALEARSTVGKV  320 (324)
T ss_pred             CCCCC-ccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCcc--CccceEEeHHHHHHHHHHHHcCCCCceE
Confidence            43321 222 22356777777766533221   13466678888888764  3466889999999999999887765 88


Q ss_pred             EEe
Q 047713          324 IIR  326 (329)
Q Consensus       324 vv~  326 (329)
                      +++
T Consensus       321 v~~  323 (324)
T cd08244         321 LLL  323 (324)
T ss_pred             EEe
Confidence            775

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.97  E-value=2.9e-30  Score=230.70  Aligned_cols=224  Identities=24%  Similarity=0.371  Sum_probs=173.9

Q ss_pred             cccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhcc------CCCCCCeEEEEcC-CHHHHHHHHHHHHcC
Q 047713           96 TSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVA------KPKKGQSVAIFGL-GAVGLAAAEGARVSG  168 (329)
Q Consensus        96 ~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~g~~VlI~Ga-g~iG~aai~la~~~G  168 (329)
                      .|+|+||+++|+..++++|++++++++|++|.++.|||.+++...      ++++|++|||+|+ |++|++++|+|++.+
T Consensus       103 ~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~  182 (347)
T KOG1198|consen  103 SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAG  182 (347)
T ss_pred             CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcC
Confidence            479999999999999999999999999999999999999999999      9999999999965 999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      + ..+++++++++.++++++|++.++|+++.+  +.+.++..+++++|+||||+|.. .+.....++... |+...++..
T Consensus       183 ~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~--~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~  257 (347)
T KOG1198|consen  183 A-IKVVTACSKEKLELVKKLGADEVVDYKDEN--VVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLV  257 (347)
T ss_pred             C-cEEEEEcccchHHHHHHcCCcEeecCCCHH--HHHHHHhhcCCCccEEEECCCCC-ccccchhhhccC-CceEEEEec
Confidence            6 455555899999999999999999999866  88999988844999999999874 666777777776 765555432


Q ss_pred             CCCC---ccc-ccccc--------ccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHH
Q 047713          249 NKDD---AFK-THPMN--------LLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLML  316 (329)
Q Consensus       249 ~~~~---~~~-~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~  316 (329)
                      ....   ... .....        ..++..+....  .....+.++.+.+++.+++  +.+.+.+.||++++++|++.+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~ie~gk--ikp~i~~~~p~~~~~ea~~~~~  333 (347)
T KOG1198|consen  258 GDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLY--FVPSAEYLKALVELIEKGK--IKPVIDSVYPFSQAKEAFEKLE  333 (347)
T ss_pred             cccccccccccchhhhhhhhheeeeeeccceeeee--ecCCHHHHHHHHHHHHcCc--ccCCcceeeeHHHHHHHHHHHh
Confidence            2211   111 00000        00111111111  1112256788899999994  4667889999999999999998


Q ss_pred             cCcc-eEEEEeeC
Q 047713          317 AGES-IRCIIRMD  328 (329)
Q Consensus       317 ~~~~-~kvvv~~~  328 (329)
                      .+.. +|+++.++
T Consensus       334 ~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  334 KSHATGKVVLEKD  346 (347)
T ss_pred             hcCCcceEEEEec
Confidence            7654 59998875

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=2.6e-29  Score=224.99  Aligned_cols=256  Identities=23%  Similarity=0.334  Sum_probs=204.6

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|++++.+++||+|++..                                              
T Consensus        50 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~----------------------------------------------   83 (312)
T cd08269          50 AEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS----------------------------------------------   83 (312)
T ss_pred             CCCcccceeeEEEEEEECCCCcCCCCCCEEEEec----------------------------------------------
Confidence            3588999999999999999999999999999642                                              


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhccc-ccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLS-CGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~-~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                          .|+|++|+.++++.++++|+++  .. ++++ .+++++++++. ..++++|++|+|+|+|.+|++++++|+.+|++
T Consensus        84 ----~g~~~~~~~v~~~~~~~lP~~~--~~-~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~  155 (312)
T cd08269          84 ----GGAFAEYDLADADHAVPLPSLL--DG-QAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGAR  155 (312)
T ss_pred             ----CCcceeeEEEchhheEECCCch--hh-hHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence                2689999999999999999988  22 3344 77888988754 78899999999998899999999999999994


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +|+++++++++.++++++|++.+++..+.+  +...+.+++.+ ++|+++|++|....+..++++++++ |+++.++...
T Consensus       156 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~  232 (312)
T cd08269         156 RVIAIDRRPARLALARELGATEVVTDDSEA--IVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ  232 (312)
T ss_pred             EEEEECCCHHHHHHHHHhCCceEecCCCcC--HHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC
Confidence            488888889999999999998888765544  77888888776 9999999998777889999999998 9999998654


Q ss_pred             CCCccccc-cccccccceEEEeeecCCC-CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc--eEEEE
Q 047713          250 KDDAFKTH-PMNLLNERTLKGTFFGNYK-PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES--IRCII  325 (329)
Q Consensus       250 ~~~~~~~~-~~~~~~~~~~~g~~~~~~~-~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~--~kvvv  325 (329)
                      .. ...+. .....++.++.+....... ..+.++++++++.++.+.+..++.+.|+++++++|++.+.+++.  +|+++
T Consensus       233 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         233 DG-PRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             CC-CcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            21 11222 1234566666655432221 12568889999999987654456788999999999999998864  58776

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.97  E-value=1e-29  Score=213.80  Aligned_cols=258  Identities=19%  Similarity=0.294  Sum_probs=210.6

Q ss_pred             CCcccCCcceEEEEEec--CCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           13 FPRIFGHEAGGIVESVG--EGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        13 ~P~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +|+-+|...+|.++...  |+.+.|++||.|+..                                              
T Consensus        67 ~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~----------------------------------------------  100 (340)
T COG2130          67 PPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV----------------------------------------------  100 (340)
T ss_pred             CCcCCCceeECCeeEEEEecCCCCCCCCCEEEec----------------------------------------------
Confidence            47778877765554432  678889999999965                                              


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCcc--chhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHc
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLD--KVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVS  167 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~--~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~  167 (329)
                            .+|+||.+++.+.+.|++++.-..  ..-++..+..|||.+|.+..+.++|++|+|.|| |++|..+.|+||..
T Consensus       101 ------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlk  174 (340)
T COG2130         101 ------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLK  174 (340)
T ss_pred             ------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhh
Confidence                  389999999999999998653222  234678889999999999999999999999976 99999999999999


Q ss_pred             CCCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          168 GASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       168 G~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+ +|+++..+++|.+++++ +|.+.++|++..+  +.+.+++..+.|+|+.||++|+ ..++..+..|+.. +|++.+|
T Consensus       175 G~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d--~~~~L~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG  249 (340)
T COG2130         175 GC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED--FAQALKEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCG  249 (340)
T ss_pred             CC-eEEEecCCHHHHHHHHHhcCCceeeecCccc--HHHHHHHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeee
Confidence            99 99999999999999988 9999999999887  9999999999999999999987 6999999999997 9999998


Q ss_pred             cCCC--CCccccc----cccccccceEEEeeec-CCCCC--CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHc
Q 047713          247 VPNK--DDAFKTH----PMNLLNERTLKGTFFG-NYKPR--SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLA  317 (329)
Q Consensus       247 ~~~~--~~~~~~~----~~~~~~~~~~~g~~~~-~~~~~--~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~  317 (329)
                      .-..  ....+..    +.++.+.+++.|+... .+.++  +..+++.+|+.+|+++.+.  +.+-.|+++++||.-+.+
T Consensus       250 ~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~  327 (340)
T COG2130         250 AISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLS  327 (340)
T ss_pred             ehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhc
Confidence            6322  1111222    3335578899998873 22221  3467889999999987664  445579999999999999


Q ss_pred             Ccce-EEEEeeCC
Q 047713          318 GESI-RCIIRMDG  329 (329)
Q Consensus       318 ~~~~-kvvv~~~~  329 (329)
                      ++.. |.|+++.+
T Consensus       328 G~N~GK~vvKv~~  340 (340)
T COG2130         328 GKNFGKLVVKVAD  340 (340)
T ss_pred             CCccceEEEEecC
Confidence            9875 99998864

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.97  E-value=1.7e-29  Score=228.58  Aligned_cols=258  Identities=17%  Similarity=0.221  Sum_probs=200.3

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|++|+.|++||+|+....                                             
T Consensus        57 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------------------------------------   91 (336)
T TIGR02817        57 GQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD---------------------------------------------   91 (336)
T ss_pred             CCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCC---------------------------------------------
Confidence            56889999999999999999999999999985410                                             


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCC-----CCeEEEEcC-CHHHHHHHHHHH
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKK-----GQSVAIFGL-GAVGLAAAEGAR  165 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~iG~aai~la~  165 (329)
                       ....|+|++|+.++++.++++|+++++++++.+++++.|||+++....++++     |++|||+|+ |.+|++++|+|+
T Consensus        92 -~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak  170 (336)
T TIGR02817        92 -IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLAR  170 (336)
T ss_pred             -CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHH
Confidence             0113799999999999999999999999999999999999999878788877     999999986 999999999999


Q ss_pred             Hc-CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713          166 VS-GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       166 ~~-G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~  244 (329)
                      .+ |+ +|++++.++++.+.++++|+++++++.. +  +...+++..++++|+|+|+++....+...+++++++ |+++.
T Consensus       171 ~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~--~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~  245 (336)
T TIGR02817       171 QLTGL-TVIATASRPESQEWVLELGAHHVIDHSK-P--LKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFAL  245 (336)
T ss_pred             HhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC-C--HHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEE
Confidence            98 98 8999988899999999999998887543 3  777777754448999999987777889999999998 99998


Q ss_pred             eccCCCCCccccccccccccceEEEeeec--CCCCC-------CCHHHHHHHHHcCCCCCCcceeeee---ecccHHHHH
Q 047713          245 VGVPNKDDAFKTHPMNLLNERTLKGTFFG--NYKPR-------SDLPSVVEKYMNKELEVEKFITHTV---PFSEINKAF  312 (329)
Q Consensus       245 ~g~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~-------~~~~~~i~~~~~~~l~~~~~~~~~~---~l~~i~~a~  312 (329)
                      ++..   ......+ +..++.++.+..+.  ....+       ..++++++++.++.+..  .+.+.+   +++++++|+
T Consensus       246 ~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~~~~a~  319 (336)
T TIGR02817       246 IDDP---AELDISP-FKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRT--TLAETFGTINAANLKRAH  319 (336)
T ss_pred             Eccc---ccccchh-hhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeec--cchhccCCCCHHHHHHHH
Confidence            8532   1112111 22344555443222  11100       23677888898887643  333445   468999999


Q ss_pred             HHHHcCcce-EEEEe
Q 047713          313 DLMLAGESI-RCIIR  326 (329)
Q Consensus       313 ~~~~~~~~~-kvvv~  326 (329)
                      +.+.+++.. |+++.
T Consensus       320 ~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       320 ALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHcCCccceEEEe
Confidence            999988764 77653

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.97  E-value=3.6e-29  Score=220.42  Aligned_cols=246  Identities=26%  Similarity=0.421  Sum_probs=194.5

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      ++|.++|+|++|+|+++|++++.|++||+|+..                                               
T Consensus        19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-----------------------------------------------   51 (277)
T cd08255          19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-----------------------------------------------   51 (277)
T ss_pred             cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence            688999999999999999999999999999864                                               


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                           ++|++|++++.+.++++|+++++++++.+ +++.+||+++ ...++++|++++|+|+|.+|++++++|+.+|+++
T Consensus        52 -----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~  124 (277)
T cd08255          52 -----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE  124 (277)
T ss_pred             -----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence                 36899999999999999999999998888 7899999985 5788999999999988999999999999999944


Q ss_pred             EEEEcCChhhHHHHHhcC-CceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          172 IIGVDLNPSRFNEAKKFG-VTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      |+++++++++.++++++| ++.++...+          ..+.+ ++|++||+++........+++++++ |+++.+|...
T Consensus       125 vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~  193 (277)
T cd08255         125 VVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYG  193 (277)
T ss_pred             EEEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEeccC
Confidence            999999999999999998 444433211          11233 8999999998777889999999998 9999998654


Q ss_pred             CCCccccccccccccceEEEeeecCC---------CCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc-
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGNY---------KPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE-  319 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~-  319 (329)
                      .. .......+..+..++.+......         ...+.++++++++.++.+.  +.+.+.|+++++++|++.+++++ 
T Consensus       194 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~  270 (277)
T cd08255         194 LK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE--ALITHRVPFEDAPEAYRLLFEDPP  270 (277)
T ss_pred             CC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcc--ccccCccCHHHHHHHHHHHHcCCc
Confidence            43 11111112234456655543221         1125688899999998754  34568899999999999998873 


Q ss_pred             -ceEEEE
Q 047713          320 -SIRCII  325 (329)
Q Consensus       320 -~~kvvv  325 (329)
                       ..|++|
T Consensus       271 ~~~k~~~  277 (277)
T cd08255         271 ECLKVVL  277 (277)
T ss_pred             cceeeeC
Confidence             357764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.97  E-value=2.5e-29  Score=226.70  Aligned_cols=261  Identities=18%  Similarity=0.261  Sum_probs=204.1

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+.+|++|+.+++||+|+....                                             
T Consensus        56 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~---------------------------------------------   90 (327)
T PRK10754         56 SLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQS---------------------------------------------   90 (327)
T ss_pred             CCCCccCcceEEEEEEeCCCCCCCCCCCEEEECCC---------------------------------------------
Confidence            46889999999999999999999999999984310                                             


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                         ..|+|++|+.++.+.++++|+++++++++.+++++.++|.++.....+++|++|+|+|+ |.+|++++++|+.+|+ 
T Consensus        91 ---~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-  166 (327)
T PRK10754         91 ---ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-  166 (327)
T ss_pred             ---CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-
Confidence               13689999999999999999999999999889999999998777788999999999975 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      ++++++.++++.+.++++|++.+++..+.+  +.+.+++++++ ++|++||++|. ..+...+++++++ |+++.++...
T Consensus       167 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~  242 (327)
T PRK10754        167 KLIGTVGSAQKAQRAKKAGAWQVINYREEN--IVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNAS  242 (327)
T ss_pred             EEEEEeCCHHHHHHHHHCCCCEEEcCCCCc--HHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCC
Confidence            788888899999999999998888776544  77888888877 89999999976 6778899999998 9999998654


Q ss_pred             CCCccccccccc-cccceE-E-EeeecCCCCC----CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-e
Q 047713          250 KDDAFKTHPMNL-LNERTL-K-GTFFGNYKPR----SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-I  321 (329)
Q Consensus       250 ~~~~~~~~~~~~-~~~~~~-~-g~~~~~~~~~----~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~  321 (329)
                      .... ......+ .++... . ..........    +.++++++++.++.+.+..+..+.|++++++++++.+.+++. .
T Consensus       243 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  321 (327)
T PRK10754        243 GPVT-GVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQG  321 (327)
T ss_pred             CCCC-CcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcc
Confidence            2211 1111111 111110 0 0000111111    124567888999987655445688999999999999988775 4


Q ss_pred             EEEEe
Q 047713          322 RCIIR  326 (329)
Q Consensus       322 kvvv~  326 (329)
                      |+|+.
T Consensus       322 ~~~~~  326 (327)
T PRK10754        322 SSLLI  326 (327)
T ss_pred             eEEEe
Confidence            88875

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.97  E-value=8e-29  Score=224.52  Aligned_cols=264  Identities=23%  Similarity=0.321  Sum_probs=203.0

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+.+|++++.|++||+|+......|+            +                            
T Consensus        53 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~------------~----------------------------   92 (339)
T cd08249          53 SYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNP------------N----------------------------   92 (339)
T ss_pred             CCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccC------------C----------------------------
Confidence            357899999999999999999999999999976443221            0                            


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCC----------CCCCeEEEEcC-CHHHHHH
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKP----------KKGQSVAIFGL-GAVGLAA  160 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~----------~~g~~VlI~Ga-g~iG~aa  160 (329)
                       ...+|+|++|+.++.+.++++|+++++++++.+++++.+||+++....++          +++++|+|+|+ |.+|+++
T Consensus        93 -~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~  171 (339)
T cd08249          93 -DPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLA  171 (339)
T ss_pred             -CCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHH
Confidence             11247999999999999999999999999999999999999987666544          78999999987 9999999


Q ss_pred             HHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhcc--C
Q 047713          161 AEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHD--G  238 (329)
Q Consensus       161 i~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~--~  238 (329)
                      +++|+.+|+ +++++. ++++.+.++++|++.+++..+.+  +.+.+++++++++|+|||++|.+..+..+++++++  +
T Consensus       172 ~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~  247 (339)
T cd08249         172 IQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHDPD--VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG  247 (339)
T ss_pred             HHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCCch--HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC
Confidence            999999999 677776 56888888999998888876544  77778777766899999999876788999999999  8


Q ss_pred             CeEEEEeccCCCCCccccccccccccceEEEeeecC---CC---CCCCHHHHHHHHHcCCCCCCcceeeeee--cccHHH
Q 047713          239 WGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGN---YK---PRSDLPSVVEKYMNKELEVEKFITHTVP--FSEINK  310 (329)
Q Consensus       239 ~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~---~~~~~~~~i~~~~~~~l~~~~~~~~~~~--l~~i~~  310 (329)
                       |+++.++......  ..... . +...+....+..   ..   ....++.+++++.++.+.+.  ....++  ++++++
T Consensus       248 -g~~v~~g~~~~~~--~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~  320 (339)
T cd08249         248 -GKLVSLLPVPEET--EPRKG-V-KVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQE  320 (339)
T ss_pred             -CEEEEecCCCccc--cCCCC-c-eEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcHHHHHH
Confidence             9999998654332  01000 1 111111111110   01   11235668888888877654  335667  999999


Q ss_pred             HHHHHHcCc-ce-EEEEee
Q 047713          311 AFDLMLAGE-SI-RCIIRM  327 (329)
Q Consensus       311 a~~~~~~~~-~~-kvvv~~  327 (329)
                      |++.+.+++ .. |+|+++
T Consensus       321 a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         321 GLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHHHCCCccceEEEEeC
Confidence            999999887 54 888864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.97  E-value=5.8e-29  Score=224.49  Aligned_cols=259  Identities=24%  Similarity=0.300  Sum_probs=205.6

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|+|++|+|+++|++++.+++||+|++..                                             
T Consensus        58 ~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~---------------------------------------------   92 (329)
T cd08250          58 VKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMS---------------------------------------------   92 (329)
T ss_pred             CCCCcccCceeEEEEEEECCCCCCCCCCCEEEEec---------------------------------------------
Confidence            45788999999999999999999999999998641                                             


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                           .|+|++|+.++.+.++++|+.  +.+++++++++.+||+++....++++|++|+|+|+ |.+|++++++|+..|+
T Consensus        93 -----~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~  165 (329)
T cd08250          93 -----FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC  165 (329)
T ss_pred             -----CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC
Confidence                 268999999999999999997  45678899999999999877788999999999985 9999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                       .|+++++++++.+.++++|++.+++..+.+  +.+.+....++++|+|||++|. ..+..++++++++ |+++.++...
T Consensus       166 -~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~  240 (329)
T cd08250         166 -HVIGTCSSDEKAEFLKSLGCDRPINYKTED--LGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFIS  240 (329)
T ss_pred             -eEEEEeCcHHHHHHHHHcCCceEEeCCCcc--HHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEeccc
Confidence             788888888999999999998887765544  6666666554589999999975 6888999999998 9999998654


Q ss_pred             CCC---------ccccccccccccceEEEeeecCCC--CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcC
Q 047713          250 KDD---------AFKTHPMNLLNERTLKGTFFGNYK--PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAG  318 (329)
Q Consensus       250 ~~~---------~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~  318 (329)
                      ...         ...+....+.++.++.+.......  ..+.+.++++++.++.+.......+.++++++++|++.+.++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~  320 (329)
T cd08250         241 GYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSG  320 (329)
T ss_pred             CCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcC
Confidence            321         011122335567788776543221  113467788888888776533344668999999999999987


Q ss_pred             cce-EEEEe
Q 047713          319 ESI-RCIIR  326 (329)
Q Consensus       319 ~~~-kvvv~  326 (329)
                      +.. |++++
T Consensus       321 ~~~~kvvv~  329 (329)
T cd08250         321 KNIGKVVVE  329 (329)
T ss_pred             CCCceEEeC
Confidence            764 77753

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.97  E-value=1e-28  Score=223.13  Aligned_cols=262  Identities=21%  Similarity=0.287  Sum_probs=207.3

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|++++.+++||+|+...                                              
T Consensus        57 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~----------------------------------------------   90 (334)
T PTZ00354         57 GSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALL----------------------------------------------   90 (334)
T ss_pred             CCCcccceeeEEEEEEeCCCCCCCCCCCEEEEec----------------------------------------------
Confidence            4567999999999999999999999999998541                                              


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                         .+|+|++|++++.++++++|+++++.+++.+++++.+||+++....++++|++|+|+|+ |.+|++++++|+.+|+ 
T Consensus        91 ---~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-  166 (334)
T PTZ00354         91 ---PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-  166 (334)
T ss_pred             ---CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-
Confidence               12689999999999999999999999999999999999999877788999999999986 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +++.++.++++.+.++++|++.+++....+ .+...++..+++ ++|++||++|. ..+..++++++++ |+++.++...
T Consensus       167 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~  243 (334)
T PTZ00354        167 ATIITTSSEEKVDFCKKLAAIILIRYPDEE-GFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMG  243 (334)
T ss_pred             EEEEEeCCHHHHHHHHHcCCcEEEecCChh-HHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCC
Confidence            666688889999999999998888764421 266677777766 89999999975 6888999999998 9999998543


Q ss_pred             CCCcccccc-ccccccceEEEeeecCCCCC-------CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-
Q 047713          250 KDDAFKTHP-MNLLNERTLKGTFFGNYKPR-------SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-  320 (329)
Q Consensus       250 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~-------~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-  320 (329)
                      ......+.. ..+.+..++.++........       +.++++++++.++.+..  .+.+.+++++++++++.+.+++. 
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~  321 (334)
T PTZ00354        244 GAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNI  321 (334)
T ss_pred             CCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCC
Confidence            322110221 12345557777654432110       11356778888886643  46688999999999999987765 


Q ss_pred             eEEEEeeC
Q 047713          321 IRCIIRMD  328 (329)
Q Consensus       321 ~kvvv~~~  328 (329)
                      .|+|+.+.
T Consensus       322 ~kvvv~~~  329 (334)
T PTZ00354        322 GKVVLTVN  329 (334)
T ss_pred             ceEEEecC
Confidence            48888765

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=4.1e-28  Score=216.54  Aligned_cols=249  Identities=21%  Similarity=0.289  Sum_probs=198.0

Q ss_pred             CCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceee
Q 047713           13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYH   92 (329)
Q Consensus        13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~   92 (329)
                      .|.++|+|++|+|+++|++++.|++||+|+...                                               
T Consensus        51 ~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~-----------------------------------------------   83 (305)
T cd08270          51 DGAVPGWDAAGVVERAAADGSGPAVGARVVGLG-----------------------------------------------   83 (305)
T ss_pred             CCCcccceeEEEEEEeCCCCCCCCCCCEEEEec-----------------------------------------------
Confidence            367899999999999999999999999998541                                               


Q ss_pred             ccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCE
Q 047713           93 FVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASR  171 (329)
Q Consensus        93 ~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~  171 (329)
                        ..|+|++|+.++.+.++++|+++++++++++++++.+||+++...... +|++|+|+|+ |.+|++++++|+..|+ +
T Consensus        84 --~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~  159 (305)
T cd08270          84 --AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-H  159 (305)
T ss_pred             --CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-E
Confidence              136999999999999999999999999999999999999986555444 5999999987 9999999999999999 7


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      ++.+++++++.+.++++|++..++...          ++.++++|+++|++|+ ..+..++++++.+ |+++.+|.....
T Consensus       160 v~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~  227 (305)
T cd08270         160 VVAVVGSPARAEGLRELGAAEVVVGGS----------ELSGAPVDLVVDSVGG-PQLARALELLAPG-GTVVSVGSSSGE  227 (305)
T ss_pred             EEEEeCCHHHHHHHHHcCCcEEEeccc----------cccCCCceEEEECCCc-HHHHHHHHHhcCC-CEEEEEeccCCC
Confidence            888888999999999999876553321          1122479999999987 4788999999998 999999865422


Q ss_pred             Cccccccccc-c--ccceEEEeeecC-CCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713          252 DAFKTHPMNL-L--NERTLKGTFFGN-YKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR  326 (329)
Q Consensus       252 ~~~~~~~~~~-~--~~~~~~g~~~~~-~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~  326 (329)
                       ........+ .  ++.++.+..... ....+.+..+++++.++++.+  .+.+.++++++++|++.+.+++.. |+|+.
T Consensus       228 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~  304 (305)
T cd08270         228 -PAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDP--RIGWRGSWTEIDEAAEALLARRFRGKAVLD  304 (305)
T ss_pred             -cccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccc--eeccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence             112222222 2  477777776543 111245777888999998764  356899999999999999877764 88876


Q ss_pred             e
Q 047713          327 M  327 (329)
Q Consensus       327 ~  327 (329)
                      +
T Consensus       305 ~  305 (305)
T cd08270         305 V  305 (305)
T ss_pred             C
Confidence            4

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.96  E-value=1.2e-27  Score=215.46  Aligned_cols=259  Identities=18%  Similarity=0.222  Sum_probs=194.4

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++  +++.|++||+|++.+..                        .|                  
T Consensus        56 ~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~~------------------------~g------------------   91 (325)
T cd05280          56 NYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGYD------------------------LG------------------   91 (325)
T ss_pred             CCCCccCcccEEEEEEe--CCCCCCCCCEEEEcccc------------------------cC------------------
Confidence            46889999999999998  56789999999975210                        00                  


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhcc--CCC-CCCeEEEEcC-CHHHHHHHHHHHHc
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVA--KPK-KGQSVAIFGL-GAVGLAAAEGARVS  167 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~--~~~-~g~~VlI~Ga-g~iG~aai~la~~~  167 (329)
                       ...+|+|++|+.++++.++++|+++++++++.+++++.++|.++....  .+. .+++|+|+|+ |.+|++++++|+.+
T Consensus        92 -~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~  170 (325)
T cd05280          92 -MNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKL  170 (325)
T ss_pred             -CCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHc
Confidence             112479999999999999999999999999999999999999865443  335 3579999987 99999999999999


Q ss_pred             CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc-CCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          168 GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN-GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       168 G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+ +|++++.++++.+.++++|++.+++..+    ....+.+... +++|+|||++|. ..+..++++++++ |+++.+|
T Consensus       171 g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g  243 (325)
T cd05280         171 GY-TVVALTGKEEQADYLKSLGASEVLDRED----LLDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCG  243 (325)
T ss_pred             CC-EEEEEeCCHHHHHHHHhcCCcEEEcchh----HHHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEe
Confidence            99 6888889999999999999988887543    2222333333 389999999977 6889999999998 9999998


Q ss_pred             cCCCCCcccccc-ccccccceEEEeeecCCCCCCCH----HHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce
Q 047713          247 VPNKDDAFKTHP-MNLLNERTLKGTFFGNYKPRSDL----PSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI  321 (329)
Q Consensus       247 ~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~----~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~  321 (329)
                      ....... .... .++.++.++.+........ +..    +.+.+++..+.   .+.+...|+++++++|++.+.+++..
T Consensus       244 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~~~~~~~  318 (325)
T cd05280         244 NAAGPEL-TTTVLPFILRGVSLLGIDSVNCPM-ELRKQVWQKLATEWKPDL---LEIVVREISLEELPEAIDRLLAGKHR  318 (325)
T ss_pred             cCCCCcc-ccccchheeeeeEEEEEEeecCch-hHHHHHHHHHHHHHhcCC---ccceeeEecHHHHHHHHHHHhcCCcc
Confidence            7543221 2222 2235788888766543221 122    23333344442   22367899999999999999988765


Q ss_pred             -EEEEee
Q 047713          322 -RCIIRM  327 (329)
Q Consensus       322 -kvvv~~  327 (329)
                       |+|+++
T Consensus       319 gk~vv~~  325 (325)
T cd05280         319 GRTVVKI  325 (325)
T ss_pred             eEEEEeC
Confidence             888763

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.96  E-value=5.7e-28  Score=216.81  Aligned_cols=259  Identities=23%  Similarity=0.349  Sum_probs=202.0

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|+  ..+++||+|++.....                                           
T Consensus        55 ~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~-------------------------------------------   89 (320)
T cd08243          55 KFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGM-------------------------------------------   89 (320)
T ss_pred             CCCccccceeEEEEEEecC--CCCCCCCEEEEecCCC-------------------------------------------
Confidence            4578999999999999995  5799999999753110                                           


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                      +....|+|++|+.++++.++++|+++++++++.+++++.+||+++....++++|++|||+|+ |.+|++++++|+.+|+ 
T Consensus        90 ~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-  168 (320)
T cd08243          90 GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-  168 (320)
T ss_pred             CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-
Confidence            00113799999999999999999999999999999999999999888888999999999987 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|++++.++++.+.++++|++.+++. ..+  +...++++ ++++|+++|++|. ..+..++++++++ |+++.+|....
T Consensus       169 ~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~--~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~  242 (320)
T cd08243         169 TVTATTRSPERAALLKELGADEVVID-DGA--IAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGG  242 (320)
T ss_pred             EEEEEeCCHHHHHHHHhcCCcEEEec-Ccc--HHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCC
Confidence            78888889999999999999887754 323  66777777 4489999999986 6788999999998 99999986433


Q ss_pred             CCccc-ccc---ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713          251 DDAFK-THP---MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII  325 (329)
Q Consensus       251 ~~~~~-~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv  325 (329)
                      ..... ...   ..+.++.++.+....... ...+..+++++..+.+.+  ...+.|+++++++|++.+.+++.. |+|+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         243 QWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-QTPLQELFDFVAAGHLDI--PPSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             CcccCCcchhhhhhhccceEEEecchhhhh-HHHHHHHHHHHHCCceec--ccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            22111 111   112355566554432211 134677888888887653  356789999999999999887764 6664

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08251 polyketide_synthase polyketide synthase

Probab=99.96  E-value=2e-27  Score=211.44  Aligned_cols=259  Identities=24%  Similarity=0.360  Sum_probs=202.4

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|+|++|+|+++|+++++|++||+|++....                                           
T Consensus        35 ~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-------------------------------------------   71 (303)
T cd08251          35 PPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE-------------------------------------------   71 (303)
T ss_pred             CCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC-------------------------------------------
Confidence            3568899999999999999999999999999865210                                           


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                          ..|+|++|+.++++.++++|++++++++++++.++.+||.++ ....+++|++|+|+++ +.+|++++++|+.+|+
T Consensus        72 ----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~  146 (303)
T cd08251          72 ----SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA  146 (303)
T ss_pred             ----CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC
Confidence                136999999999999999999999999999999999999986 5788999999999965 9999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       ++++++.++++.+.++++|++.+++....+  +...+..++++ ++|+++|+++. ......+++++++ |+++.++..
T Consensus       147 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~  221 (303)
T cd08251         147 -EIYATASSDDKLEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGVDVVINTLSG-EAIQKGLNCLAPG-GRYVEIAMT  221 (303)
T ss_pred             -EEEEEcCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHcCCCCceEEEECCcH-HHHHHHHHHhccC-cEEEEEecc
Confidence             799998899999999999998888776554  77778887776 89999999964 6788899999998 999998764


Q ss_pred             CCCCccccccccccccceEEEeeecCC---CC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNY---KP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-  321 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-  321 (329)
                      ............+.++..+....+...   ..   .+.+.++++++.++.+.  ++..+.|++++++++++.+.+++.. 
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (303)
T cd08251         222 ALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELR--PTVSRIFPFDDIGEAYRYLSDRENIG  299 (303)
T ss_pred             CCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCcc--CCCceEEcHHHHHHHHHHHHhCCCcc
Confidence            322111111111223333322221111   00   12356678888888654  3456889999999999999877654 


Q ss_pred             EEE
Q 047713          322 RCI  324 (329)
Q Consensus       322 kvv  324 (329)
                      |++
T Consensus       300 ~iv  302 (303)
T cd08251         300 KVV  302 (303)
T ss_pred             eEe
Confidence            655

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.96  E-value=2.1e-27  Score=214.02  Aligned_cols=262  Identities=17%  Similarity=0.226  Sum_probs=194.6

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|  ++.|++||+|++.+..                                           .
T Consensus        56 ~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~~-------------------------------------------~   90 (326)
T cd08289          56 RYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSYD-------------------------------------------L   90 (326)
T ss_pred             CCCcCcccceeEEEEEcC--CCCCCCCCEEEEcccc-------------------------------------------c
Confidence            458999999999999954  5789999999975310                                           0


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhc--cC-CCCCCeEEEEcC-CHHHHHHHHHHHHc
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNV--AK-PKKGQSVAIFGL-GAVGLAAAEGARVS  167 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~-~~~g~~VlI~Ga-g~iG~aai~la~~~  167 (329)
                      +....|+|++|+.++++.++++|+++++++++.+++++.|||.++...  .. ..++++|||+|+ |.+|++++++|+.+
T Consensus        91 ~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~  170 (326)
T cd08289          91 GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKL  170 (326)
T ss_pred             CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHC
Confidence            011247999999999999999999999999999999999998876432  23 345789999987 99999999999999


Q ss_pred             CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          168 GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       168 G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      |+ +|+++++++++.+.++++|++.+++..+.   ....++++.++++|+|||++|. ..+..++++++++ |+++.+|.
T Consensus       171 g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~  244 (326)
T cd08289         171 GY-EVVASTGKADAADYLKKLGAKEVIPREEL---QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGL  244 (326)
T ss_pred             CC-eEEEEecCHHHHHHHHHcCCCEEEcchhH---HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEee
Confidence            99 78888899999999999999888876442   2344555544489999999987 6888999999998 99999987


Q ss_pred             CCCCCcccc-ccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCC---CCcceeeeeecccHHHHHHHHHcCcce-E
Q 047713          248 PNKDDAFKT-HPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELE---VEKFITHTVPFSEINKAFDLMLAGESI-R  322 (329)
Q Consensus       248 ~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~---~~~~~~~~~~l~~i~~a~~~~~~~~~~-k  322 (329)
                      ..... ... ...++.++.++.+....... ......+++.+.+ .+.   ....+.+.|+++++++|++.+.+++.. |
T Consensus       245 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gk  321 (326)
T cd08289         245 TGGGE-VETTVFPFILRGVNLLGIDSVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGR  321 (326)
T ss_pred             cCCCC-CCcchhhhhhccceEEEEEeEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccce
Confidence            53321 221 12233678888876532110 0122334333332 221   122357899999999999999888765 8


Q ss_pred             EEEee
Q 047713          323 CIIRM  327 (329)
Q Consensus       323 vvv~~  327 (329)
                      +|+++
T Consensus       322 vvv~~  326 (326)
T cd08289         322 TVVKL  326 (326)
T ss_pred             EEEeC
Confidence            87753

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.96  E-value=3.3e-27  Score=211.31  Aligned_cols=258  Identities=21%  Similarity=0.293  Sum_probs=206.8

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+.+|++++.|++||+|++..                                              
T Consensus        53 ~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~----------------------------------------------   86 (320)
T cd05286          53 PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG----------------------------------------------   86 (320)
T ss_pred             CCCccCCcceeEEEEEECCCCCCCCCCCEEEEec----------------------------------------------
Confidence            4678999999999999999999999999998641                                              


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                         ..|+|++|+.++.+.++++|+++++.+++.+++.+.+++.++....++++|++|+|+|+ |.+|++++++|+.+|+ 
T Consensus        87 ---~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-  162 (320)
T cd05286          87 ---PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-  162 (320)
T ss_pred             ---CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-
Confidence               02689999999999999999999999999999999999998877888999999999985 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      .|++++.++++.+.++++|++.+++..+.+  +...+++.+.+ ++|++|+++|+ .....++++++++ |+++.++...
T Consensus       163 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~  238 (320)
T cd05286         163 TVIGTVSSEEKAELARAAGADHVINYRDED--FVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNAS  238 (320)
T ss_pred             EEEEEcCCHHHHHHHHHCCCCEEEeCCchh--HHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCC
Confidence            788888899999999999998888765544  77778887766 89999999987 5788999999998 9999998644


Q ss_pred             CCCccccccccc-cccceEEEeeecCCCCC-----CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-E
Q 047713          250 KDDAFKTHPMNL-LNERTLKGTFFGNYKPR-----SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-R  322 (329)
Q Consensus       250 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~-----~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-k  322 (329)
                      .. ........+ .++.++.+.........     +.+.++++++.++.+..  ...+.|++++++++++.+.+++.. |
T Consensus       239 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~~  315 (320)
T cd05286         239 GP-VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKV--EIGKRYPLADAAQAHRDLESRKTTGK  315 (320)
T ss_pred             CC-CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcC--cccceEcHHHHHHHHHHHHcCCCCce
Confidence            32 111122222 56666654433222111     22456778888886654  356789999999999999887764 7


Q ss_pred             EEEe
Q 047713          323 CIIR  326 (329)
Q Consensus       323 vvv~  326 (329)
                      +++.
T Consensus       316 vv~~  319 (320)
T cd05286         316 LLLI  319 (320)
T ss_pred             EEEe
Confidence            7764

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.96  E-value=5.2e-27  Score=212.32  Aligned_cols=260  Identities=19%  Similarity=0.222  Sum_probs=204.0

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++++.|++||+|+.....                                            
T Consensus        58 ~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--------------------------------------------   93 (336)
T cd08252          58 GQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDI--------------------------------------------   93 (336)
T ss_pred             CCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCCC--------------------------------------------
Confidence            357899999999999999999999999999864210                                            


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCC-----CCeEEEEcC-CHHHHHHHHHHH
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKK-----GQSVAIFGL-GAVGLAAAEGAR  165 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~iG~aai~la~  165 (329)
                        ..+|+|++|+.++.++++++|+++++++++.+++++.+||.++.....+.+     |++|+|+|+ |.+|++++++|+
T Consensus        94 --~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~  171 (336)
T cd08252          94 --TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAK  171 (336)
T ss_pred             --CCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHH
Confidence              013699999999999999999999999999999999999998777788877     999999985 999999999999


Q ss_pred             HcC-CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713          166 VSG-ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       166 ~~G-~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~  244 (329)
                      .+| + +|++++.++++.+.++++|++.+++..+ +  +...++...++++|++||++|....+..++++++.+ |+++.
T Consensus       172 ~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~--~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~  246 (336)
T cd08252         172 QLTGL-TVIATASRPESIAWVKELGADHVINHHQ-D--LAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICL  246 (336)
T ss_pred             HcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc-c--HHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEE
Confidence            999 7 8999988999999999999988887653 3  656666443348999999998777899999999998 99999


Q ss_pred             eccCCCCCccccccccccccceEEEeeecCCCC---------CCCHHHHHHHHHcCCCCCCcc-eeeeeecccHHHHHHH
Q 047713          245 VGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKP---------RSDLPSVVEKYMNKELEVEKF-ITHTVPFSEINKAFDL  314 (329)
Q Consensus       245 ~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---------~~~~~~~i~~~~~~~l~~~~~-~~~~~~l~~i~~a~~~  314 (329)
                      ++...  ...+.. .+..++.++.+..+.....         .+.++.+++++.++.+.+... ....++++++++|++.
T Consensus       247 ~g~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~  323 (336)
T cd08252         247 IVDPQ--EPLDLG-PLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHAL  323 (336)
T ss_pred             ecCCC--Ccccch-hhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHH
Confidence            98642  112211 1225677777655432110         023667888888887653211 1235799999999999


Q ss_pred             HHcCcce-EEEE
Q 047713          315 MLAGESI-RCII  325 (329)
Q Consensus       315 ~~~~~~~-kvvv  325 (329)
                      +.+++.. |+++
T Consensus       324 ~~~~~~~~~vv~  335 (336)
T cd08252         324 LESGKTIGKIVL  335 (336)
T ss_pred             HHcCCccceEEe
Confidence            9988765 7765

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>smart00829 PKS_ER Enoylreductase

Probab=99.96  E-value=3.2e-27  Score=208.23  Aligned_cols=255  Identities=24%  Similarity=0.381  Sum_probs=201.6

Q ss_pred             CCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceee
Q 047713           13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYH   92 (329)
Q Consensus        13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~   92 (329)
                      .|.++|+|++|+|+++|++++.|++||+|+...                                               
T Consensus        23 ~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-----------------------------------------------   55 (288)
T smart00829       23 GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-----------------------------------------------   55 (288)
T ss_pred             CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------------------------------
Confidence            368999999999999999999999999998641                                               


Q ss_pred             ccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCE
Q 047713           93 FVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASR  171 (329)
Q Consensus        93 ~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~  171 (329)
                         .|+|++|+.++.+.++++|+++++.+++.+++++.++|.++.....+.+|++|+|+|+ |.+|++++++|+..|+ +
T Consensus        56 ---~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~-~  131 (288)
T smart00829       56 ---PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGA-E  131 (288)
T ss_pred             ---CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-E
Confidence               2689999999999999999999999999999999999998777788999999999985 9999999999999999 7


Q ss_pred             EEEEcCChhhHHHHHhcCC--ceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          172 IIGVDLNPSRFNEAKKFGV--TEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      |++++.++++.+.++++|+  +.+++..+.+  +.+.+.+..++ ++|+++|++|+ ..+..++++++++ |+++.++..
T Consensus       132 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~  207 (288)
T smart00829      132 VFATAGSPEKRDFLRELGIPDDHIFSSRDLS--FADEILRATGGRGVDVVLNSLAG-EFLDASLRCLAPG-GRFVEIGKR  207 (288)
T ss_pred             EEEEeCCHHHHHHHHHcCCChhheeeCCCcc--HHHHHHHHhCCCCcEEEEeCCCH-HHHHHHHHhccCC-cEEEEEcCc
Confidence            8999889999999999998  6777665544  77777777766 89999999985 6788899999998 999999864


Q ss_pred             CCCCccccccccccccceEEEeeecCCC-----CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-E
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYK-----PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-R  322 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-k  322 (329)
                      ............+.++.++.+.......     ..+.+..+++++.++.+..  ...+.|++++++++++.+..+... |
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (288)
T smart00829      208 DIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRP--LPVTVFPISDVEDAFRYMQQGKHIGK  285 (288)
T ss_pred             CCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccC--cCceEEcHHHHHHHHHHHhcCCCcce
Confidence            3211111111223445555444332111     0123566778888886643  245789999999999999887654 5


Q ss_pred             EE
Q 047713          323 CI  324 (329)
Q Consensus       323 vv  324 (329)
                      ++
T Consensus       286 iv  287 (288)
T smart00829      286 VV  287 (288)
T ss_pred             Ee
Confidence            54

Enoylreductase in Polyketide synthases.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.96  E-value=2.3e-27  Score=214.05  Aligned_cols=250  Identities=20%  Similarity=0.281  Sum_probs=198.8

Q ss_pred             CcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeec
Q 047713           14 PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHF   93 (329)
Q Consensus        14 P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   93 (329)
                      +.++|+|++|+|+++|++  .|++||+|+..                                                 
T Consensus        65 ~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~-------------------------------------------------   93 (329)
T cd05288          65 GEPMRGGGVGEVVESRSP--DFKVGDLVSGF-------------------------------------------------   93 (329)
T ss_pred             CCcccCceEEEEEecCCC--CCCCCCEEecc-------------------------------------------------
Confidence            568999999999999964  79999999853                                                 


Q ss_pred             cccccccccEEeee-ccEEEcCCCCC--ccchhc-ccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcC
Q 047713           94 VGTSTFSEYTVTHV-GCVAKINPAAP--LDKVCV-LSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSG  168 (329)
Q Consensus        94 ~~~g~~a~~~~v~~-~~~~~~p~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G  168 (329)
                         ++|++|+.++. +.++++|++++  +.++++ +++++.+||+++.....+.++++|||+|+ |.+|++++++|+..|
T Consensus        94 ---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G  170 (329)
T cd05288          94 ---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLG  170 (329)
T ss_pred             ---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcC
Confidence               47999999999 99999999985  445555 89999999999877788999999999985 999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          169 ASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      + +++++++++++.+.+++ +|++.+++..+.+  +...+.+.+++++|++||++|. ..+..++++++++ |+++.++.
T Consensus       171 ~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~  245 (329)
T cd05288         171 A-RVVGIAGSDEKCRWLVEELGFDAAINYKTPD--LAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGA  245 (329)
T ss_pred             C-EEEEEeCCHHHHHHHHhhcCCceEEecCChh--HHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEee
Confidence            9 78888889999999888 9998888876544  7777777765589999999976 6888999999998 99999986


Q ss_pred             CCCCCccc-----cccccccccceEEEeeecCCCC--CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc
Q 047713          248 PNKDDAFK-----THPMNLLNERTLKGTFFGNYKP--RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES  320 (329)
Q Consensus       248 ~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~  320 (329)
                      ........     .....+.++.++.+........  .+.+.++++++.++.+...  ....+++++++++++.+.+++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~  323 (329)
T cd05288         246 ISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYR--EDVVEGLENAPEAFLGLFTGKN  323 (329)
T ss_pred             ccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccc--ccccccHHHHHHHHHHHhcCCC
Confidence            44322111     1222356777887765433211  1346778888989877654  3356899999999999987765


Q ss_pred             e-EEE
Q 047713          321 I-RCI  324 (329)
Q Consensus       321 ~-kvv  324 (329)
                      . |++
T Consensus       324 ~gkvv  328 (329)
T cd05288         324 TGKLV  328 (329)
T ss_pred             cccee
Confidence            4 665

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.96  E-value=9.5e-27  Score=209.52  Aligned_cols=261  Identities=17%  Similarity=0.222  Sum_probs=195.3

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|++  ++++.|++||+|++.+...              +                           
T Consensus        54 ~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~--------------~---------------------------   90 (323)
T TIGR02823        54 RSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYGL--------------G---------------------------   90 (323)
T ss_pred             CCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccCCC--------------C---------------------------
Confidence            35689999999999998  6678899999999653100              0                           


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhh--ccCCCCCC-eEEEEcC-CHHHHHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVN--VAKPKKGQ-SVAIFGL-GAVGLAAAEGARV  166 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~-~VlI~Ga-g~iG~aai~la~~  166 (329)
                        ...+|++++|+.+|.+.++++|+++++++++.++..+.+++.++..  ...+.+|+ +|+|+|+ |.+|++++++|+.
T Consensus        91 --~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~  168 (323)
T TIGR02823        91 --VSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSK  168 (323)
T ss_pred             --CCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHH
Confidence              0114799999999999999999999999999999999999887533  33478898 9999987 9999999999999


Q ss_pred             cCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          167 SGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       167 ~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|+ ++++++.++++.+.++++|++.+++..+..    ..++.+..+++|+++|++|. ..+..++++++++ |+++.+|
T Consensus       169 ~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g  241 (323)
T TIGR02823       169 LGY-EVVASTGKAEEEDYLKELGASEVIDREDLS----PPGKPLEKERWAGAVDTVGG-HTLANVLAQLKYG-GAVAACG  241 (323)
T ss_pred             cCC-eEEEEeCCHHHHHHHHhcCCcEEEccccHH----HHHHHhcCCCceEEEECccH-HHHHHHHHHhCCC-CEEEEEc
Confidence            999 677777778888999999998888764422    24455544479999999986 4788999999998 9999998


Q ss_pred             cCCCCCccccc-cccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-
Q 047713          247 VPNKDDAFKTH-PMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-  321 (329)
Q Consensus       247 ~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-  321 (329)
                      ..... ..... ..++.++.++.+........   .+.++.+.+++..+.+.  +. ...|+++++++|++.+.+++.. 
T Consensus       242 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~l~~~~~a~~~~~~~~~~~  317 (323)
T TIGR02823       242 LAGGP-DLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLE--SI-TREITLEELPEALEQILAGQHRG  317 (323)
T ss_pred             ccCCC-CccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCc--Cc-eeeecHHHHHHHHHHHhCCCccc
Confidence            75332 12221 22236778887765432111   01234455556566543  23 4689999999999999988765 


Q ss_pred             EEEEee
Q 047713          322 RCIIRM  327 (329)
Q Consensus       322 kvvv~~  327 (329)
                      |+|+++
T Consensus       318 k~vv~~  323 (323)
T TIGR02823       318 RTVVDV  323 (323)
T ss_pred             eEEEeC
Confidence            888753

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.96  E-value=4e-27  Score=207.88  Aligned_cols=257  Identities=26%  Similarity=0.339  Sum_probs=203.6

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++++.|++||+|++..                                             
T Consensus        25 ~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~---------------------------------------------   59 (293)
T cd05195          25 PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA---------------------------------------------   59 (293)
T ss_pred             CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe---------------------------------------------
Confidence            45689999999999999999999999999998642                                             


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                           .|+|++|+.++.+.++++|+.+++.+++.+++++.++|.++.+...+++|++|+|+|+ |.+|++++++|+.+|+
T Consensus        60 -----~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~  134 (293)
T cd05195          60 -----PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA  134 (293)
T ss_pred             -----cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCC
Confidence                 2689999999999999999999999999999999999998878788999999999975 9999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcC--CceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          170 SRIIGVDLNPSRFNEAKKFG--VTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                       ++++++.++++.+.+++++  ++.+++..+.+  +...+++.+.+ ++|+++|++|.. .+..++++++++ |+++.++
T Consensus       135 -~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g  209 (293)
T cd05195         135 -EVFATVGSEEKREFLRELGGPVDHIFSSRDLS--FADGILRATGGRGVDVVLNSLSGE-LLRASWRCLAPF-GRFVEIG  209 (293)
T ss_pred             -EEEEEeCCHHHHHHHHHhCCCcceEeecCchh--HHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcccC-ceEEEee
Confidence             7888888888999988888  66777655443  77778887766 899999999875 889999999998 9999998


Q ss_pred             cCCCCCccccccccccccceEEEeeecCCC---C---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc
Q 047713          247 VPNKDDAFKTHPMNLLNERTLKGTFFGNYK---P---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES  320 (329)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~  320 (329)
                      ..............+.++..+.........   .   .+.+..+++++.++.+.  +.....+++++++++++.+.+++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~  287 (293)
T cd05195         210 KRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PLPPTVVPSASEIDAFRLMQSGKH  287 (293)
T ss_pred             ccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cCCCeeechhhHHHHHHHHhcCCC
Confidence            654321111112223344555443332211   0   12466788888888654  445678999999999999987765


Q ss_pred             e-EEE
Q 047713          321 I-RCI  324 (329)
Q Consensus       321 ~-kvv  324 (329)
                      . |++
T Consensus       288 ~~~iv  292 (293)
T cd05195         288 IGKVV  292 (293)
T ss_pred             Cceec
Confidence            4 654

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.95  E-value=1.3e-26  Score=211.21  Aligned_cols=265  Identities=15%  Similarity=0.243  Sum_probs=193.0

Q ss_pred             CCcccCCcceEEEEEecCCCC-cCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           13 FPRIFGHEAGGIVESVGEGVT-DLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        13 ~P~~~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      +|.++|+|++|+|+++|++++ .|++||+|++.....|+                                         
T Consensus        58 ~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~-----------------------------------------   96 (352)
T cd08247          58 KEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYG-----------------------------------------   96 (352)
T ss_pred             CCCccCceeEEEEEEeCcccccCCCCCCEEEEeecCCCC-----------------------------------------
Confidence            378999999999999999998 89999999975332111                                         


Q ss_pred             eccccccccccEEeeec----cEEEcCCCCCccchhcccccccchhhhhhhcc-CCCCCCeEEEEcC-CHHHHHHHHHHH
Q 047713           92 HFVGTSTFSEYTVTHVG----CVAKINPAAPLDKVCVLSCGISTGFGATVNVA-KPKKGQSVAIFGL-GAVGLAAAEGAR  165 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~----~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VlI~Ga-g~iG~aai~la~  165 (329)
                         ..|+|++|++++..    .++++|+++++++++.++.++.|||+++.... ++++|++|+|+|+ +.+|++++++|+
T Consensus        97 ---~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~  173 (352)
T cd08247          97 ---GQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAK  173 (352)
T ss_pred             ---CCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHH
Confidence               14799999999987    78999999999999999999999999876666 7999999999987 899999999999


Q ss_pred             HcCC-CEEEEEcCChhhHHHHHhcCCceeeCCCCCCc--hHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhc---cC
Q 047713          166 VSGA-SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDK--PVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVH---DG  238 (329)
Q Consensus       166 ~~G~-~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~--~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~---~~  238 (329)
                      .+|. +++++++. +++.+.++++|++.+++..+.+.  .+.+.++..+++ ++|++||++|.......++++++   ++
T Consensus       174 ~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~  252 (352)
T cd08247         174 NHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN  252 (352)
T ss_pred             hcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC
Confidence            8743 35667654 55566788999988887654321  133444444434 89999999988667888999999   98


Q ss_pred             CeEEEEeccCCC-CCcc---------cccccccc-----ccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeee
Q 047713          239 WGVAVLVGVPNK-DDAF---------KTHPMNLL-----NERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTV  303 (329)
Q Consensus       239 ~G~vv~~g~~~~-~~~~---------~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~  303 (329)
                       |+++.++.... ....         ......+.     +...+.......  ..+.++.+++++.++.+.  +.+.+.+
T Consensus       253 -G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~--~~~~~~~  327 (352)
T cd08247         253 -GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDP--NADWIEKCAELIADGKVK--PPIDSVY  327 (352)
T ss_pred             -CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecC--CHHHHHHHHHHHhCCCeE--eeeccEe
Confidence             99998742211 1000         00001111     122222111101  013467788888888664  3466889


Q ss_pred             ecccHHHHHHHHHcCcc-eEEEEee
Q 047713          304 PFSEINKAFDLMLAGES-IRCIIRM  327 (329)
Q Consensus       304 ~l~~i~~a~~~~~~~~~-~kvvv~~  327 (329)
                      +++++++|++.+++++. .|+++++
T Consensus       328 ~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         328 PFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             cHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            99999999999988775 4888753

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.95  E-value=2.6e-26  Score=206.13  Aligned_cols=264  Identities=25%  Similarity=0.378  Sum_probs=205.8

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|+++++|++||+|++.+...                                          
T Consensus        55 ~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~~------------------------------------------   92 (325)
T cd08253          55 PPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGW------------------------------------------   92 (325)
T ss_pred             CCCCeecccceEEEEEeeCCCCCCCCCCCEEEEecccc------------------------------------------
Confidence            45788999999999999999999999999999763210                                          


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                        ....|++++|+.++.+.++++|+++++++++.+++++.+||+++....++.+|++|+|+|+ +.+|++++++++..|+
T Consensus        93 --~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~  170 (325)
T cd08253          93 --GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA  170 (325)
T ss_pred             --CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Confidence              0013689999999999999999999999999999999999998877789999999999986 9999999999999998


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|++++.++++.+.++++|++.+++....+  +...+++.+.+ ++|++++++|. ......+++++++ |+++.++..
T Consensus       171 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~~~~  245 (325)
T cd08253         171 -RVIATASSAEGAELVRQAGADAVFNYRAED--LADRILAATAGQGVDVIIEVLAN-VNLAKDLDVLAPG-GRIVVYGSG  245 (325)
T ss_pred             -EEEEEeCCHHHHHHHHHcCCCEEEeCCCcC--HHHHHHHHcCCCceEEEEECCch-HHHHHHHHhhCCC-CEEEEEeec
Confidence             788888889999999999998888765544  77777777666 89999999976 4677888999998 999999864


Q ss_pred             CCCCccccccccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEE
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCI  324 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvv  324 (329)
                      .........+ .+.++.++.+........   .+.+..+.+++..+.+.  +.....|++++++++++.+.++... |++
T Consensus       246 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~kvv  322 (325)
T cd08253         246 GLRGTIPINP-LMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALR--PVIAREYPLEEAAAAHEAVESGGAIGKVV  322 (325)
T ss_pred             CCcCCCChhH-HHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCcc--CccccEEcHHHHHHHHHHHHcCCCcceEE
Confidence            4221111111 244566665554322111   11244555666777554  3356889999999999999877654 877


Q ss_pred             Ee
Q 047713          325 IR  326 (329)
Q Consensus       325 v~  326 (329)
                      ++
T Consensus       323 ~~  324 (325)
T cd08253         323 LD  324 (325)
T ss_pred             Ee
Confidence            75

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.95  E-value=1.8e-26  Score=206.82  Aligned_cols=257  Identities=23%  Similarity=0.340  Sum_probs=205.1

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++++.+++||+|+....                                            
T Consensus        55 ~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~--------------------------------------------   90 (323)
T cd05276          55 PGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLA--------------------------------------------   90 (323)
T ss_pred             CCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEecC--------------------------------------------
Confidence            356789999999999999999999999999986421                                            


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                           +|+|++|+.++.+.++++|+++++.+++.++.++.++|.++.....+.++++|+|+|+ |.+|++++++++..|+
T Consensus        91 -----~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~  165 (323)
T cd05276          91 -----GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA  165 (323)
T ss_pred             -----CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC
Confidence                 2689999999999999999999999999999999999998777788999999999986 9999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       .++.++.++++.+.++++|.+.+++....+  +...+.....+ ++|++||++|. ..+..++++++++ |+++.++..
T Consensus       166 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~~~~~-g~~i~~~~~  240 (323)
T cd05276         166 -RVIATAGSEEKLEACRALGADVAINYRTED--FAEEVKEATGGRGVDVILDMVGG-DYLARNLRALAPD-GRLVLIGLL  240 (323)
T ss_pred             -EEEEEcCCHHHHHHHHHcCCCEEEeCCchh--HHHHHHHHhCCCCeEEEEECCch-HHHHHHHHhhccC-CEEEEEecC
Confidence             788888888899989999988777765543  66777777666 89999999986 4578889999997 999999764


Q ss_pred             CCCCcccccc-ccccccceEEEeeecCCCCC-------CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc
Q 047713          249 NKDDAFKTHP-MNLLNERTLKGTFFGNYKPR-------SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES  320 (329)
Q Consensus       249 ~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~-------~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~  320 (329)
                      .... ..... .++.++.++.+.........       ..+.++++++.++.+.  +..+..|++++++++++.+.++..
T Consensus       241 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~  317 (323)
T cd05276         241 GGAK-AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIR--PVIDKVFPLEEAAEAHRRMESNEH  317 (323)
T ss_pred             CCCC-CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCcc--CCcceEEcHHHHHHHHHHHHhCCC
Confidence            3221 11111 12357888887765443111       1245567778777664  346788999999999999987765


Q ss_pred             e-EEE
Q 047713          321 I-RCI  324 (329)
Q Consensus       321 ~-kvv  324 (329)
                      . |++
T Consensus       318 ~~kvv  322 (323)
T cd05276         318 IGKIV  322 (323)
T ss_pred             cceEe
Confidence            4 655

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.95  E-value=8.2e-28  Score=229.80  Aligned_cols=226  Identities=19%  Similarity=0.228  Sum_probs=195.8

Q ss_pred             cccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEE-cCCHHHHHHHHHHHHcCCCEEEEEc
Q 047713           98 TFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF-GLGAVGLAAAEGARVSGASRIIGVD  176 (329)
Q Consensus        98 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~-Gag~iG~aai~la~~~G~~~vv~~~  176 (329)
                      ++++.+.++.+++|.+|.++.+++|+++|+.|+|+|++|..+...++|+++||| |+|++|++||.+|.++|+ .|+++.
T Consensus      1506 sLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTV 1584 (2376)
T KOG1202|consen 1506 SLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTV 1584 (2376)
T ss_pred             hhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEec
Confidence            789999999999999999999999999999999999999999999999999999 569999999999999999 899999


Q ss_pred             CChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          177 LNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       177 ~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      .++||++++.+    |-.+.+-|.++.+  |...+..-+.| |+|+|+++. ..+.++.+++||+-. |++..+|..+..
T Consensus      1585 GSaEKRefL~~rFPqLqe~~~~NSRdts--FEq~vl~~T~GrGVdlVLNSL-aeEkLQASiRCLa~~-GRFLEIGKfDLS 1660 (2376)
T KOG1202|consen 1585 GSAEKREFLLKRFPQLQETNFANSRDTS--FEQHVLWHTKGRGVDLVLNSL-AEEKLQASIRCLALH-GRFLEIGKFDLS 1660 (2376)
T ss_pred             CcHHHHHHHHHhchhhhhhccccccccc--HHHHHHHHhcCCCeeeehhhh-hHHHHHHHHHHHHhc-Ceeeeecceecc
Confidence            99999998754    3345566666655  99999999988 999999999 678999999999998 999999987777


Q ss_pred             CccccccccccccceEEEeeecCCCC--CCCHHHHHHHHHcCCC--CCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713          252 DAFKTHPMNLLNERTLKGTFFGNYKP--RSDLPSVVEKYMNKEL--EVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR  326 (329)
Q Consensus       252 ~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~l--~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~  326 (329)
                      ...++....+.+|.++.|..+.+..+  .+++.++..++++|.-  .+.|+.+++|+-.++++||+.|.+++++ |+|++
T Consensus      1661 qNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvik 1740 (2376)
T KOG1202|consen 1661 QNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIK 1740 (2376)
T ss_pred             cCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEE
Confidence            66777777889999999987654432  2356777787777632  3678889999999999999999999986 99987


Q ss_pred             eC
Q 047713          327 MD  328 (329)
Q Consensus       327 ~~  328 (329)
                      +-
T Consensus      1741 vr 1742 (2376)
T KOG1202|consen 1741 VR 1742 (2376)
T ss_pred             Ec
Confidence            63

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.95  E-value=5.3e-27  Score=213.49  Aligned_cols=257  Identities=21%  Similarity=0.296  Sum_probs=193.4

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++++.|++||+|++.+..                                           
T Consensus        71 ~~~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------------------------------------------  107 (350)
T cd08248          71 IEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------------------------------  107 (350)
T ss_pred             CCCCeeecceeEEEEEecCCCcccCCCCCEEEEecCC-------------------------------------------
Confidence            4568999999999999999999999999999975321                                           


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCC----CCeEEEEcC-CHHHHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKK----GQSVAIFGL-GAVGLAAAEGAR  165 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~----g~~VlI~Ga-g~iG~aai~la~  165 (329)
                         ...|+|++|+.++++.++++|+++++++++.+++++.++|+++.....+.+    |++|+|+|+ |.+|++++++|+
T Consensus       108 ---~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~  184 (350)
T cd08248         108 ---WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLK  184 (350)
T ss_pred             ---CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHH
Confidence               113799999999999999999999999999999999999998777677654    999999985 999999999999


Q ss_pred             HcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713          166 VSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       166 ~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      .+|+ +|+++..+ ++.+.++++|.+.+++..+.+  +...+...  +++|++||++|.. ....++++++++ |+++.+
T Consensus       185 ~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~  256 (350)
T cd08248         185 AWGA-HVTTTCST-DAIPLVKSLGADDVIDYNNED--FEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTL  256 (350)
T ss_pred             HCCC-eEEEEeCc-chHHHHHHhCCceEEECCChh--HHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEe
Confidence            9999 67777654 577788999998888765433  44444331  3799999999864 888999999998 999999


Q ss_pred             ccCCCCCcc--cc--cc-----ccccccce-------EEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHH
Q 047713          246 GVPNKDDAF--KT--HP-----MNLLNERT-------LKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN  309 (329)
Q Consensus       246 g~~~~~~~~--~~--~~-----~~~~~~~~-------~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~  309 (329)
                      +........  ..  ..     .+......       +....  .......+..+++++.++.+.  +.+.+.|++++++
T Consensus       257 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~  332 (350)
T cd08248         257 VSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF--FSPSGSALDELAKLVEDGKIK--PVIDKVFPFEEVP  332 (350)
T ss_pred             cCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEE--ECCCHHHHHHHHHHHhCCCEe--cccceeecHHHHH
Confidence            854321110  00  00     00000000       00000  011124578899999998764  3467889999999


Q ss_pred             HHHHHHHcCcce-EEEE
Q 047713          310 KAFDLMLAGESI-RCII  325 (329)
Q Consensus       310 ~a~~~~~~~~~~-kvvv  325 (329)
                      ++++.+.+++.. |+++
T Consensus       333 ~a~~~~~~~~~~~~vv~  349 (350)
T cd08248         333 EAYEKVESGHARGKTVI  349 (350)
T ss_pred             HHHHHHhcCCCceEEEe
Confidence            999999877654 7665

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=2.9e-26  Score=206.12  Aligned_cols=263  Identities=23%  Similarity=0.369  Sum_probs=206.0

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+.+|++++.|++||+|+..+...                                           
T Consensus        56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~-------------------------------------------   92 (328)
T cd08268          56 PLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAAD-------------------------------------------   92 (328)
T ss_pred             CCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccccc-------------------------------------------
Confidence            4578999999999999999999999999999763211                                           


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                       ....|++++|+.++++.++++|+++++++++.+++++.++|.++.....+.++++|+|+|+ |.+|++++++++..|+ 
T Consensus        93 -~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-  170 (328)
T cd08268          93 -LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-  170 (328)
T ss_pred             -cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-
Confidence             0114789999999999999999999999999999999999999877888999999999987 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +++.++.++++.+.++++|.+.+++.....  +...+.+...+ ++|++++++|+ .....++++++++ |+++.++...
T Consensus       171 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~  246 (328)
T cd08268         171 TVIATTRTSEKRDALLALGAAHVIVTDEED--LVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALS  246 (328)
T ss_pred             EEEEEcCCHHHHHHHHHcCCCEEEecCCcc--HHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCC
Confidence            788888888888888889988777765544  66677777666 89999999987 6778889999998 9999998644


Q ss_pred             CCCccccccc-cccccceEEEeeecCCCC-CCC----HHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-E
Q 047713          250 KDDAFKTHPM-NLLNERTLKGTFFGNYKP-RSD----LPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-R  322 (329)
Q Consensus       250 ~~~~~~~~~~-~~~~~~~~~g~~~~~~~~-~~~----~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-k  322 (329)
                      ... ...... .+.++.++.+........ ...    +..+.+++.++.+..  .....|++++++++++.+.+++.. |
T Consensus       247 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (328)
T cd08268         247 GEP-TPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQIGK  323 (328)
T ss_pred             CCC-CCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCCCce
Confidence            321 122222 356777777765432111 112    334445566665543  356789999999999999877654 8


Q ss_pred             EEEe
Q 047713          323 CIIR  326 (329)
Q Consensus       323 vvv~  326 (329)
                      ++++
T Consensus       324 vv~~  327 (328)
T cd08268         324 IVVT  327 (328)
T ss_pred             EEEe
Confidence            8775

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=2.5e-26  Score=207.37  Aligned_cols=254  Identities=22%  Similarity=0.296  Sum_probs=193.3

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|++++.|++||+|++...                                             
T Consensus        56 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~---------------------------------------------   90 (331)
T cd08273          56 PLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTR---------------------------------------------   90 (331)
T ss_pred             CCCcccccceEEEEEEeCCCCccCCCCCEEEEeCC---------------------------------------------
Confidence            46889999999999999999999999999996521                                             


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                          .|+|++|+.++.+.++++|+++++++++.+++++.+||+++....++.+|++|+|+|+ |.+|++++++|+..|+ 
T Consensus        91 ----~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-  165 (331)
T cd08273          91 ----VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-  165 (331)
T ss_pred             ----CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-
Confidence                2689999999999999999999999999999999999998877788999999999986 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|+.++. +++.+.++++|+.. ++....+  +...  ....+++|+++|++|+. .+..++++++.+ |+++.++....
T Consensus       166 ~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~--~~~~--~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~  237 (331)
T cd08273         166 EVYGTAS-ERNHAALRELGATP-IDYRTKD--WLPA--MLTPGGVDVVFDGVGGE-SYEESYAALAPG-GTLVCYGGNSS  237 (331)
T ss_pred             EEEEEeC-HHHHHHHHHcCCeE-EcCCCcc--hhhh--hccCCCceEEEECCchH-HHHHHHHHhcCC-CEEEEEccCCC
Confidence            7888876 88888889999754 3333322  3332  23334899999999875 488999999998 99999986543


Q ss_pred             CCccccc---------------cccccccceEEEeeecCC-C---CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHH
Q 047713          251 DDAFKTH---------------PMNLLNERTLKGTFFGNY-K---PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA  311 (329)
Q Consensus       251 ~~~~~~~---------------~~~~~~~~~~~g~~~~~~-~---~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a  311 (329)
                      .......               .....+..++........ .   ..+.+..+++++.++.+.  +.+.+.+++++++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a  315 (331)
T cd08273         238 LLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIR--PKIAKRLPLSEVAEA  315 (331)
T ss_pred             CCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCcc--CCcceEEcHHHHHHH
Confidence            3221111               011112222222221100 0   013567788889898764  346688999999999


Q ss_pred             HHHHHcCcce-EEEE
Q 047713          312 FDLMLAGESI-RCII  325 (329)
Q Consensus       312 ~~~~~~~~~~-kvvv  325 (329)
                      ++.+.+++.. |+|+
T Consensus       316 ~~~~~~~~~~gkvv~  330 (331)
T cd08273         316 HRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHHcCCCcceEEe
Confidence            9999877654 6654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.95  E-value=7.3e-26  Score=203.27  Aligned_cols=259  Identities=22%  Similarity=0.297  Sum_probs=207.1

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+.+|+++..+++||+|+....                                             
T Consensus        56 ~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~---------------------------------------------   90 (325)
T TIGR02824        56 GASDILGLEVAGEVVAVGEGVSRWKVGDRVCALVA---------------------------------------------   90 (325)
T ss_pred             CCCCCccceeEEEEEEeCCCCCCCCCCCEEEEccC---------------------------------------------
Confidence            45789999999999999999999999999986411                                             


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                          +|+|++|+.++.+.++++|+++++.+++++++++.++|.++.....++++++|+|+|+ |.+|++++++++..|+ 
T Consensus        91 ----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-  165 (325)
T TIGR02824        91 ----GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-  165 (325)
T ss_pred             ----CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-
Confidence                2689999999999999999999999999999999999998778889999999999986 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      ++++++.++++.+.++++|.+.+++....+  +...++....+ ++|++++++|. ..+..++++++++ |+++.++...
T Consensus       166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~  241 (325)
T TIGR02824       166 RVFTTAGSDEKCAACEALGADIAINYREED--FVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQG  241 (325)
T ss_pred             EEEEEeCCHHHHHHHHHcCCcEEEecCchh--HHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCC
Confidence            788888888888888899987777655433  66777777766 89999999976 5778899999998 9999998643


Q ss_pred             CCCccccccc-cccccceEEEeeecCCCCC-------CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce
Q 047713          250 KDDAFKTHPM-NLLNERTLKGTFFGNYKPR-------SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI  321 (329)
Q Consensus       250 ~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~-------~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~  321 (329)
                      .... ..... .+.++.++.+.........       ..+.++++++.++.+.  +..++.+++++++++++.+.+++..
T Consensus       242 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~  318 (325)
T TIGR02824       242 GRKA-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVR--PVIDKVFPLEDAAQAHALMESGDHI  318 (325)
T ss_pred             CCcC-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCccc--CccccEEeHHHHHHHHHHHHhCCCc
Confidence            2211 22222 2367888888765442110       1235567788787654  3456889999999999998877654


Q ss_pred             -EEEEee
Q 047713          322 -RCIIRM  327 (329)
Q Consensus       322 -kvvv~~  327 (329)
                       |+++++
T Consensus       319 ~~~v~~~  325 (325)
T TIGR02824       319 GKIVLTV  325 (325)
T ss_pred             ceEEEeC
Confidence             777753

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.95  E-value=1.4e-25  Score=201.86  Aligned_cols=261  Identities=16%  Similarity=0.223  Sum_probs=196.1

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|++  ++++.+++||+|++....              .+                           
T Consensus        55 ~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~--------------~~---------------------------   91 (324)
T cd08288          55 RTFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGWG--------------VG---------------------------   91 (324)
T ss_pred             CCCCCccccceEEEEEe--CCCCCCCCCCEEEECCcc--------------CC---------------------------
Confidence            34688999999999999  778889999999974210              00                           


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhh--hccCCC-CCCeEEEEcC-CHHHHHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATV--NVAKPK-KGQSVAIFGL-GAVGLAAAEGARV  166 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~-~g~~VlI~Ga-g~iG~aai~la~~  166 (329)
                        ....|+|++|+.++.+.++++|+++++++++.++.++.+++.++.  ...... ++++|+|+|+ |.+|++++|+|+.
T Consensus        92 --~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~  169 (324)
T cd08288          92 --ERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLAR  169 (324)
T ss_pred             --CCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence              011378999999999999999999999999999999999887643  123445 6789999987 9999999999999


Q ss_pred             cCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          167 SGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       167 ~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|+ ++++++.++++.+.++++|++.++++.+    ....++.+..+++|.++|++|. ..+..++..++.+ |+++.+|
T Consensus       170 ~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G  242 (324)
T cd08288         170 LGY-EVVASTGRPEEADYLRSLGASEIIDRAE----LSEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACG  242 (324)
T ss_pred             CCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch----hhHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEE
Confidence            999 7888888999999999999988887654    2334555555578999999976 4677788888887 9999998


Q ss_pred             cCCCCCccccccc-cccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-
Q 047713          247 VPNKDDAFKTHPM-NLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-  321 (329)
Q Consensus       247 ~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-  321 (329)
                      ..... ....... ++.++.++.+........   .+.+..+.+++..+.+.+   +.+.++++++++|++.+++++.. 
T Consensus       243 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~  318 (324)
T cd08288         243 LAGGA-DLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRG  318 (324)
T ss_pred             ecCCC-CCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccC
Confidence            64321 1111222 236788888765432221   123445666677775532   36899999999999999988765 


Q ss_pred             EEEEee
Q 047713          322 RCIIRM  327 (329)
Q Consensus       322 kvvv~~  327 (329)
                      |+++++
T Consensus       319 ~vvv~~  324 (324)
T cd08288         319 RVVVDV  324 (324)
T ss_pred             eEEEeC
Confidence            888753

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.94  E-value=1.5e-25  Score=201.42  Aligned_cols=259  Identities=24%  Similarity=0.339  Sum_probs=203.0

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      ..|.++|||++|+|+++|+++..|++||+|++....                          +.                
T Consensus        56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~--------------------------~~----------------   93 (326)
T cd08272          56 PLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGG--------------------------LG----------------   93 (326)
T ss_pred             CCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCC--------------------------cC----------------
Confidence            457899999999999999999999999999965210                          00                


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                        ...|+|++|+.++++.++++|+.+++.+++.++..+.+||+++....++++|++++|+|+ |.+|++++++|+..|+ 
T Consensus        94 --~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-  170 (326)
T cd08272          94 --GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-  170 (326)
T ss_pred             --CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-
Confidence              013689999999999999999999999999999999999998878889999999999985 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      .|++++.+ ++.+.++++|++.+++...  . +.+.+.+.+.+ ++|+++|++|+ ..+..++++++++ |+++.++...
T Consensus       171 ~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~-~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~  244 (326)
T cd08272         171 RVYATASS-EKAAFARSLGADPIIYYRE--T-VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA  244 (326)
T ss_pred             EEEEEech-HHHHHHHHcCCCEEEecch--h-HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC
Confidence            78888777 8888889999887776533  2 66677777776 89999999987 5678899999997 9999997653


Q ss_pred             CCCccccccccccccceEEEeeecC--C---C---CCCCHHHHHHHHHcCCCCCCccee-eeeecccHHHHHHHHHcCcc
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGN--Y---K---PRSDLPSVVEKYMNKELEVEKFIT-HTVPFSEINKAFDLMLAGES  320 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~--~---~---~~~~~~~~i~~~~~~~l~~~~~~~-~~~~l~~i~~a~~~~~~~~~  320 (329)
                       .  ...... ..++.++.+.....  .   .   ..+.+..+++++.++.+.  +.++ +.|++++++++++.+.+++.
T Consensus       245 -~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~  318 (326)
T cd08272         245 -T--HDLAPL-SFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLR--PLLDPRTFPLEEAAAAHARLESGSA  318 (326)
T ss_pred             -c--cchhhH-hhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcc--cccccceecHHHHHHHHHHHHcCCc
Confidence             1  121111 25666666655321  1   0   012466677888887654  3334 78999999999999987765


Q ss_pred             e-EEEEee
Q 047713          321 I-RCIIRM  327 (329)
Q Consensus       321 ~-kvvv~~  327 (329)
                      . |+++++
T Consensus       319 ~~~vv~~~  326 (326)
T cd08272         319 RGKIVIDV  326 (326)
T ss_pred             ccEEEEEC
Confidence            4 888753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.94  E-value=2.6e-25  Score=199.37  Aligned_cols=257  Identities=23%  Similarity=0.453  Sum_probs=207.1

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+.+|++++.+++||+|+..+.                                             
T Consensus        56 ~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~---------------------------------------------   90 (323)
T cd08241          56 PLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTG---------------------------------------------   90 (323)
T ss_pred             CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecC---------------------------------------------
Confidence            44778999999999999999999999999996520                                             


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                          .|++++|+.++.+.++++|++++..++++++.++.+|+.++.....++++++|+|+|+ |.+|++++++|+..|+ 
T Consensus        91 ----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-  165 (323)
T cd08241          91 ----QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-  165 (323)
T ss_pred             ----CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-
Confidence                2689999999999999999999999888899999999998776788999999999987 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      .|+.++.++++.+.++++|++.+++....+  +...+...+.+ ++|++++++|. ..+..++++++++ |+++.++...
T Consensus       166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~  241 (323)
T cd08241         166 RVIAAASSEEKLALARALGADHVIDYRDPD--LRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFAS  241 (323)
T ss_pred             EEEEEeCCHHHHHHHHHcCCceeeecCCcc--HHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCC
Confidence            788888888999999999988777765544  77778887776 89999999986 6778899999998 9999998643


Q ss_pred             CCCcccccc-ccccccceEEEeeecCCCC------CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-
Q 047713          250 KDDAFKTHP-MNLLNERTLKGTFFGNYKP------RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-  321 (329)
Q Consensus       250 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~------~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-  321 (329)
                      .... .... ..+.++.++.+.....+..      .+.+.++++++.++.+.  ++....|++++++++++.+.+++.. 
T Consensus       242 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (323)
T cd08241         242 GEIP-QIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR--PHVSAVFPLEQAAEALRALADRKATG  318 (323)
T ss_pred             CCcC-cCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcc--cccceEEcHHHHHHHHHHHHhCCCCC
Confidence            2211 0111 2345677887766543321      12456788888888664  3467889999999999998877654 


Q ss_pred             EEEE
Q 047713          322 RCII  325 (329)
Q Consensus       322 kvvv  325 (329)
                      |+++
T Consensus       319 ~vvv  322 (323)
T cd08241         319 KVVL  322 (323)
T ss_pred             cEEe
Confidence            7665

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.94  E-value=5.8e-25  Score=198.70  Aligned_cols=260  Identities=21%  Similarity=0.352  Sum_probs=201.5

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+.+|++++++++||+|+....                                            
T Consensus        54 ~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~--------------------------------------------   89 (337)
T cd08275          54 PKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTR--------------------------------------------   89 (337)
T ss_pred             CCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEecC--------------------------------------------
Confidence            355789999999999999999999999999996521                                            


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHc-C
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVS-G  168 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~-G  168 (329)
                           .|+|++|+.++.+.++++|+.+++++++.+++++.++|+++....++++|++|+|+|+ |.+|++++++|+.. +
T Consensus        90 -----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~  164 (337)
T cd08275          90 -----FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPN  164 (337)
T ss_pred             -----CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccC
Confidence                 2689999999999999999999999999999999999999878888999999999987 99999999999988 3


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      . .++.. .++++.+.++++|++.+++....+  +...+++.+++++|+++|++|+ .....++++++++ |+++.+|..
T Consensus       165 ~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~  238 (337)
T cd08275         165 V-TVVGT-ASASKHEALKENGVTHVIDYRTQD--YVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPM-GRLVVYGAA  238 (337)
T ss_pred             c-EEEEe-CCHHHHHHHHHcCCcEEeeCCCCc--HHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccC-cEEEEEeec
Confidence            3 23222 345677888889988887766544  7777777775589999999986 4678899999998 999999864


Q ss_pred             CCCCc--cc-------------cc-cccccccceEEEeeecCCCC-C----CCHHHHHHHHHcCCCCCCcceeeeeeccc
Q 047713          249 NKDDA--FK-------------TH-PMNLLNERTLKGTFFGNYKP-R----SDLPSVVEKYMNKELEVEKFITHTVPFSE  307 (329)
Q Consensus       249 ~~~~~--~~-------------~~-~~~~~~~~~~~g~~~~~~~~-~----~~~~~~i~~~~~~~l~~~~~~~~~~~l~~  307 (329)
                      .....  ..             .. ...+.++.++.+........ .    ..+.++++++.++.+.  +.....|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  316 (337)
T cd08275         239 NLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIK--PKIDSVFPFEE  316 (337)
T ss_pred             CCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCC--CceeeEEcHHH
Confidence            42211  10             00 12345677777765432111 1    1256677888888654  34568899999


Q ss_pred             HHHHHHHHHcCcce-EEEEee
Q 047713          308 INKAFDLMLAGESI-RCIIRM  327 (329)
Q Consensus       308 i~~a~~~~~~~~~~-kvvv~~  327 (329)
                      ++++++.+.+++.. |+++++
T Consensus       317 ~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         317 VGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHHHcCCCcceEEEeC
Confidence            99999999877654 887753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.94  E-value=2.6e-25  Score=199.98  Aligned_cols=260  Identities=22%  Similarity=0.311  Sum_probs=198.0

Q ss_pred             CCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceee
Q 047713           13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYH   92 (329)
Q Consensus        13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~   92 (329)
                      +|.++|||++|+|+.+|++++.+++||+|++.+..                                             
T Consensus        56 ~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~---------------------------------------------   90 (325)
T cd08271          56 YPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASL---------------------------------------------   90 (325)
T ss_pred             CCcccccceEEEEEEeCCCCCcCCCCCEEEeccCC---------------------------------------------
Confidence            47899999999999999999999999999975311                                             


Q ss_pred             ccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCE
Q 047713           93 FVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASR  171 (329)
Q Consensus        93 ~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~  171 (329)
                       ...|+|++|+.++.+.++++|++++..+++.+++++.+++.++....++++|++|+|+|+ +.+|++++++|+..|+ .
T Consensus        91 -~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~  168 (325)
T cd08271          91 -ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-R  168 (325)
T ss_pred             -CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-E
Confidence             013689999999999999999999999999999999999999878888999999999987 8999999999999999 6


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      ++.+. ++++.+.++++|++.+++.....  +...+++...+ ++|++++++++. .....++++++. |+++.++....
T Consensus       169 v~~~~-~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~~  243 (325)
T cd08271         169 VITTC-SKRNFEYVKSLGADHVIDYNDED--VCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRPD  243 (325)
T ss_pred             EEEEE-cHHHHHHHHHcCCcEEecCCCcc--HHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCCC
Confidence            77665 67777888889998888765544  66777777766 899999999874 456789999998 99999875432


Q ss_pred             CCc-cccccccccccceEEEeeecCC-----CCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EE
Q 047713          251 DDA-FKTHPMNLLNERTLKGTFFGNY-----KPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RC  323 (329)
Q Consensus       251 ~~~-~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kv  323 (329)
                      ... ..+......++..+........     ...+.+.++++++.++.+.+  ...+.|+++++.++++.+.++... |+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~~ki  321 (325)
T cd08271         244 ASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEP--LVIEVLPFEQLPEALRALKDRHTRGKI  321 (325)
T ss_pred             CcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeee--ccceEEcHHHHHHHHHHHHcCCccceE
Confidence            210 0111111122233322221111     00123466788888887643  345789999999999999877654 88


Q ss_pred             EEe
Q 047713          324 IIR  326 (329)
Q Consensus       324 vv~  326 (329)
                      +++
T Consensus       322 v~~  324 (325)
T cd08271         322 VVT  324 (325)
T ss_pred             EEE
Confidence            775

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.94  E-value=2.6e-25  Score=199.45  Aligned_cols=255  Identities=25%  Similarity=0.289  Sum_probs=190.5

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++++.+++||+|+.....                                            
T Consensus        57 ~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--------------------------------------------   92 (319)
T cd08267          57 PFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP--------------------------------------------   92 (319)
T ss_pred             CCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--------------------------------------------
Confidence            357899999999999999999999999999865321                                            


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                        ...|+|++|+.++.+.++++|++++.++++.+++++.+||+++....++++|++|+|+|+ |.+|++++++|+.+|+ 
T Consensus        93 --~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-  169 (319)
T cd08267          93 --KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-  169 (319)
T ss_pred             --CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-
Confidence              013689999999999999999999999999999999999999777777999999999987 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCH-HHHHHHHHhhccCCeEEEEeccC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSV-QAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~-~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +|++++.+ ++.+.++++|.+.+++....+  +.   +..+.+ ++|++++++|.. ......+..++++ |+++.++..
T Consensus       170 ~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~  242 (319)
T cd08267         170 HVTGVCST-RNAELVRSLGADEVIDYTTED--FV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGG  242 (319)
T ss_pred             EEEEEeCH-HHHHHHHHcCCCEeecCCCCC--cc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccc
Confidence            78887755 788888999998887765543  33   334444 899999999742 2333333348887 999999865


Q ss_pred             CCCCcccc---ccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEE
Q 047713          249 NKDDAFKT---HPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCI  324 (329)
Q Consensus       249 ~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvv  324 (329)
                      ........   ..........+.......  ..+.+.++++++.++.+.  +++.+.|+++++++|++.+.+++.. |++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~i~~a~~~~~~~~~~~~vv  318 (319)
T cd08267         243 PSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLEQLAELVEEGKLK--PVIDSVYPLEDAPEAYRRLKSGRARGKVV  318 (319)
T ss_pred             cccccccccccchhhccccceEEEEEecC--CHHHHHHHHHHHHCCCee--eeeeeEEcHHHHHHHHHHHhcCCCCCcEe
Confidence            43221111   011111112222111111  135688888999888654  3467899999999999999877654 554

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.94  E-value=6.5e-25  Score=195.70  Aligned_cols=248  Identities=22%  Similarity=0.332  Sum_probs=194.7

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+.+|++++.+++||+|+..+..                                            
T Consensus        58 ~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~--------------------------------------------   93 (309)
T cd05289          58 TLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPF--------------------------------------------   93 (309)
T ss_pred             CCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCC--------------------------------------------
Confidence            458899999999999999999999999999975311                                            


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCC
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGAS  170 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~  170 (329)
                        ...|+|++|+.++...++++|+++++..++.+++.+.+++.++.....+.+|++|+|+|+ |.+|++++++++..|+ 
T Consensus        94 --~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-  170 (309)
T cd05289          94 --TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-  170 (309)
T ss_pred             --CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-
Confidence              013689999999999999999999999999999999999998777777999999999986 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +|++++.++ +.+.++++|.+.+++....+  +.+    ...+ ++|+++|++|+. ....++++++++ |+++.++...
T Consensus       171 ~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~--~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~  241 (309)
T cd05289         171 RVIATASAA-NADFLRSLGADEVIDYTKGD--FER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPP  241 (309)
T ss_pred             EEEEEecch-hHHHHHHcCCCEEEeCCCCc--hhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCC
Confidence            677777666 78888889987777665433  332    3334 899999999874 788999999998 9999998643


Q ss_pred             CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEE
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCI  324 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvv  324 (329)
                      ....     ..+.++.++........  .+.+.++++++.++.+.  +.+++.|++++++++++.+.+++.. |++
T Consensus       242 ~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv  308 (309)
T cd05289         242 PAEQ-----AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHARGKVV  308 (309)
T ss_pred             cchh-----hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence            3211     12234444444332111  25688888999888653  3467889999999999998877654 554

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.93  E-value=2.9e-24  Score=180.37  Aligned_cols=249  Identities=17%  Similarity=0.260  Sum_probs=195.2

Q ss_pred             cceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeeccccccc
Q 047713           20 EAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTF   99 (329)
Q Consensus        20 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~   99 (329)
                      ..+|+|++  |+-+++++||.|+...                                                    +|
T Consensus        78 ~GV~kVi~--S~~~~~~~GD~v~g~~----------------------------------------------------gW  103 (343)
T KOG1196|consen   78 FGVAKVID--SGHPNYKKGDLVWGIV----------------------------------------------------GW  103 (343)
T ss_pred             CceEEEEe--cCCCCCCcCceEEEec----------------------------------------------------cc
Confidence            67899999  5668899999999652                                                    79


Q ss_pred             cccEEeeecc--EEEcCC--CCCccc-hhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEE
Q 047713          100 SEYTVTHVGC--VAKINP--AAPLDK-VCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRII  173 (329)
Q Consensus       100 a~~~~v~~~~--~~~~p~--~~~~~~-aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv  173 (329)
                      .||.+++...  ..+||.  ++++.. .-.+..+..|||..+.+...+++|++|+|.|| |.+|+++.|+|+.+|+ +|+
T Consensus       104 eeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VV  182 (343)
T KOG1196|consen  104 EEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVV  182 (343)
T ss_pred             eEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEE
Confidence            9999887643  344543  333332 24577789999999999999999999999976 9999999999999999 999


Q ss_pred             EEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC--
Q 047713          174 GVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK--  250 (329)
Q Consensus       174 ~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~--  250 (329)
                      ++..+++|.++++. +|.+..+|+.++. +...++++..++++|+.||.+|+ ..++..+..++.. ||++.+|.-..  
T Consensus       183 GsaGS~EKv~ll~~~~G~d~afNYK~e~-~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN  259 (343)
T KOG1196|consen  183 GSAGSKEKVDLLKTKFGFDDAFNYKEES-DLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYN  259 (343)
T ss_pred             EecCChhhhhhhHhccCCccceeccCcc-CHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhcc
Confidence            99999999998764 7999999998873 38888999888899999999987 6899999999997 99999996432  


Q ss_pred             -CCc--cccccccccccceEEEeeecCCCCC--CCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEE
Q 047713          251 -DDA--FKTHPMNLLNERTLKGTFFGNYKPR--SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCI  324 (329)
Q Consensus       251 -~~~--~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvv  324 (329)
                       +.+  +.-....+.|.+++.|+.+..+.++  +.+..+..++.+|++....-+  .-.|+..++||.-|-+++.. |.+
T Consensus       260 ~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqi  337 (343)
T KOG1196|consen  260 LENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQL  337 (343)
T ss_pred             ccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceE
Confidence             111  1122344678888888766544332  345678888999988654322  33699999999999988864 888


Q ss_pred             EeeC
Q 047713          325 IRMD  328 (329)
Q Consensus       325 v~~~  328 (329)
                      +.+.
T Consensus       338 v~va  341 (343)
T KOG1196|consen  338 VKVA  341 (343)
T ss_pred             EEee
Confidence            7764

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.73  E-value=2.6e-17  Score=128.08  Aligned_cols=128  Identities=28%  Similarity=0.450  Sum_probs=110.6

Q ss_pred             HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHH
Q 047713          155 AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFE  233 (329)
Q Consensus       155 ~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~  233 (329)
                      ++|++++|+|+.+|+ +|++++++++++++++++|+++++++++.+  +.+.+++++++ ++|+||||+|.+..++.+++
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~--~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~   77 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSDDD--FVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK   77 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTTSS--HHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccccc--cccccccccccccceEEEEecCcHHHHHHHHH
Confidence            589999999999996 999999999999999999999999998877  99999999998 99999999998899999999


Q ss_pred             hhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHH
Q 047713          234 CVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYM  289 (329)
Q Consensus       234 ~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~  289 (329)
                      +++++ |+++.+|.............++.+++++.|++.++.   ++++++++++.
T Consensus        78 ~l~~~-G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~la  129 (130)
T PF00107_consen   78 LLRPG-GRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSP---EDFQEALQLLA  129 (130)
T ss_dssp             HEEEE-EEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGH---HHHHHHHHHHH
T ss_pred             HhccC-CEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCH---HHHHHHHHHhc
Confidence            99998 999999987622222222445689999999987764   67888888775

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.71  E-value=7.2e-18  Score=126.97  Aligned_cols=83  Identities=35%  Similarity=0.589  Sum_probs=72.0

Q ss_pred             CCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCC
Q 047713            9 QTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGK   88 (329)
Q Consensus         9 ~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   88 (329)
                      ....+|.++|||++|+|+++|++|+.|++||+|++.+...|+.|.+|+.++++.|.+....                   
T Consensus        27 ~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~-------------------   87 (109)
T PF08240_consen   27 PPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEVL-------------------   87 (109)
T ss_dssp             STSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEET-------------------
T ss_pred             cCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCEe-------------------
Confidence            4568899999999999999999999999999999999999999999999999999876553                   


Q ss_pred             ceeeccccccccccEEeeeccEEEc
Q 047713           89 PIYHFVGTSTFSEYTVTHVGCVAKI  113 (329)
Q Consensus        89 ~~~~~~~~g~~a~~~~v~~~~~~~~  113 (329)
                         +...+|+|+||+.+|+++++||
T Consensus        88 ---g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   88 ---GLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             ---TTSSTCSSBSEEEEEGGGEEEE
T ss_pred             ---EcCCCCcccCeEEEehHHEEEC
Confidence               1224689999999999999985

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.39  E-value=8.8e-12  Score=113.74  Aligned_cols=174  Identities=18%  Similarity=0.211  Sum_probs=130.2

Q ss_pred             hhhhhccCC-CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc
Q 047713          134 GATVNVAKP-KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       134 ~~l~~~~~~-~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .++.+..++ .+|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+.+.++.+|++.+ +       ..+.+     
T Consensus       190 ~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v-----  255 (413)
T cd00401         190 DGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV-----  255 (413)
T ss_pred             HHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH-----
Confidence            334444333 689999999999999999999999999 89999999999999999998432 1       21222     


Q ss_pred             CCccEEEEecCCHHHHHHH-HHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHH--HHHHHHH
Q 047713          213 GGVDRSVECTGSVQAMISA-FECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLP--SVVEKYM  289 (329)
Q Consensus       213 ~~~d~Vid~~g~~~~~~~~-~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~i~~~~  289 (329)
                      .++|+||+++|....+... ++.++++ |.++.+|..  +..++. ..+..+++++.++.....  ...++  +.+.++.
T Consensus       256 ~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~eId~-~~L~~~el~i~g~~~~~~--~~~~~~g~aI~LLa  329 (413)
T cd00401         256 KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DVEIDV-KGLKENAVEVVNIKPQVD--RYELPDGRRIILLA  329 (413)
T ss_pred             cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CCccCH-HHHHhhccEEEEccCCcc--eEEcCCcchhhhhh
Confidence            2589999999988888876 8999998 999999854  222222 223457788887664322  12455  6899999


Q ss_pred             cCCC-CCCcceeee-----eecc-cHHHHHHHHHcCcc--eEEEEee
Q 047713          290 NKEL-EVEKFITHT-----VPFS-EINKAFDLMLAGES--IRCIIRM  327 (329)
Q Consensus       290 ~~~l-~~~~~~~~~-----~~l~-~i~~a~~~~~~~~~--~kvvv~~  327 (329)
                      +|++ .+...+++.     ++|+ |+.++++.+.++..  .|+++.+
T Consensus       330 ~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p  376 (413)
T cd00401         330 EGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP  376 (413)
T ss_pred             CcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence            9988 777777777     8999 99999999887654  3776654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.30  E-value=7.2e-11  Score=110.46  Aligned_cols=154  Identities=18%  Similarity=0.183  Sum_probs=110.0

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCC-----------chHHHHHH
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYD-----------KPVQQVIA  208 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~-----------~~~~~~~~  208 (329)
                      ...++++|+|+|+|++|+++++.|+.+|+ .|++++.++++++.++++|++.+ ++..+.+           .++.+..+
T Consensus       161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            35689999999999999999999999999 89999999999999999999854 5543211           12333333


Q ss_pred             hh-hc--CCccEEEEecCCH-----HH-HHHHHHhhccCCeEEEEeccCC-CCCcccc-cccccc-ccceEEEeeecCCC
Q 047713          209 DM-TN--GGVDRSVECTGSV-----QA-MISAFECVHDGWGVAVLVGVPN-KDDAFKT-HPMNLL-NERTLKGTFFGNYK  276 (329)
Q Consensus       209 ~~-~~--~~~d~Vid~~g~~-----~~-~~~~~~~l~~~~G~vv~~g~~~-~~~~~~~-~~~~~~-~~~~~~g~~~~~~~  276 (329)
                      +. ..  +++|+||+|+|.+     .. .+.+++.++++ |.++.++... +...... ....+. +++++.|.....  
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P--  316 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP--  316 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc--
Confidence            32 33  2799999999853     35 48999999998 9999998742 3211222 123344 788998876321  


Q ss_pred             CCCCHH-HHHHHHHcCCCCCCccee
Q 047713          277 PRSDLP-SVVEKYMNKELEVEKFIT  300 (329)
Q Consensus       277 ~~~~~~-~~i~~~~~~~l~~~~~~~  300 (329)
                        ..+. .+.+++.++.+.+.++++
T Consensus       317 --~~~p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        317 --SRLPTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             --hhHHHHHHHHHHhCCccHHHHhc
Confidence              2344 588888888776555544

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.15  E-value=7.7e-12  Score=96.73  Aligned_cols=120  Identities=20%  Similarity=0.342  Sum_probs=74.5

Q ss_pred             cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC--CHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccc
Q 047713          188 FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG--SVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNER  265 (329)
Q Consensus       188 lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g--~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~  265 (329)
                      ||+++++++.+.+  +      ...+++|+|||++|  ....+..++++| ++ |+++.++.     .... .....+..
T Consensus         1 LGAd~vidy~~~~--~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-----~~~~-~~~~~~~~   64 (127)
T PF13602_consen    1 LGADEVIDYRDTD--F------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-----DLPS-FARRLKGR   64 (127)
T ss_dssp             CT-SEEEETTCSH--H------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-----HHHH-HHHHHHCH
T ss_pred             CCcCEEecCCCcc--c------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-----cccc-hhhhhccc
Confidence            6899999887543  4      22348999999998  655557777888 87 99999874     1000 00011112


Q ss_pred             eEEEeeecCCC----CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEE
Q 047713          266 TLKGTFFGNYK----PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCII  325 (329)
Q Consensus       266 ~~~g~~~~~~~----~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv  325 (329)
                      .+.+..+....    ..+.++++++++.+|++.  +.+.++|||+++++|++.+++++.. |+||
T Consensus        65 ~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~--~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   65 SIRYSFLFSVDPNAIRAEALEELAELVAEGKLK--PPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             ceEEEEEEecCCCchHHHHHHHHHHHHHCCCeE--EeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            22222221100    113589999999999764  5688899999999999999998865 8875

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.67  E-value=1.7e-07  Score=82.27  Aligned_cols=165  Identities=18%  Similarity=0.261  Sum_probs=101.9

Q ss_pred             ccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhh--h
Q 047713          139 VAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS-RIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADM--T  211 (329)
Q Consensus       139 ~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~-~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~--~  211 (329)
                      .+.+++|++||.+|+|. |..++++++..|.. +|++++.+++..+.+++.    +...+- ....      .+.++  .
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~------d~~~l~~~  143 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLG------EIEALPVA  143 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEc------chhhCCCC
Confidence            45678999999999887 88888888877753 799999999998888764    322111 1111      12222  2


Q ss_pred             cCCccEEEEec------CCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHH
Q 047713          212 NGGVDRSVECT------GSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVV  285 (329)
Q Consensus       212 ~~~~d~Vid~~------g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i  285 (329)
                      .+.+|+|+...      .....+..+.++|+++ |+++..+......   . +..+.+...+.+......   ....++.
T Consensus       144 ~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~~---~-~~~~~~~~~~~~~~~~~~---~~~~e~~  215 (272)
T PRK11873        144 DNSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRGE---L-PEEIRNDAELYAGCVAGA---LQEEEYL  215 (272)
T ss_pred             CCceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccCC---C-CHHHHHhHHHHhccccCC---CCHHHHH
Confidence            33799998543      2346789999999998 9999876543221   1 111222222222122122   2455566


Q ss_pred             HHHHc-CCCCCCcceeeeeecccHHHHHHHH--HcCc
Q 047713          286 EKYMN-KELEVEKFITHTVPFSEINKAFDLM--LAGE  319 (329)
Q Consensus       286 ~~~~~-~~l~~~~~~~~~~~l~~i~~a~~~~--~~~~  319 (329)
                      +++.+ |...........++++++.++++.+  ..++
T Consensus       216 ~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~  252 (272)
T PRK11873        216 AMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGR  252 (272)
T ss_pred             HHHHHCCCCceEEEeccceecccHHHHHHHhcccccc
Confidence            66665 3333333345668899999999988  4444

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.46  E-value=1.8e-06  Score=81.02  Aligned_cols=105  Identities=18%  Similarity=0.200  Sum_probs=79.6

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCC------------CchHHHHHHhh
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY------------DKPVQQVIADM  210 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~------------~~~~~~~~~~~  210 (329)
                      .++++|+|+|+|.+|+++++.|+.+|+ .|++++.++++++.++++|++.+.....+            ..++.+...++
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            467999999999999999999999999 79999999999999999998763322111            01233333333


Q ss_pred             hc---CCccEEEEec---CCHH---HHHHHHHhhccCCeEEEEeccCC
Q 047713          211 TN---GGVDRSVECT---GSVQ---AMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       211 ~~---~~~d~Vid~~---g~~~---~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      ..   .++|+||+++   |.+.   ..+..++.++++ +.++.++...
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~  287 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQ  287 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCC
Confidence            33   2799999999   6433   457778999998 9999997543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.21  E-value=2.4e-05  Score=72.18  Aligned_cols=103  Identities=22%  Similarity=0.314  Sum_probs=76.8

Q ss_pred             hhhhhhccCCC-CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhh
Q 047713          133 FGATVNVAKPK-KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       133 ~~~l~~~~~~~-~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      |.++....++. +|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|.. +.+       +.+.+    
T Consensus       199 ~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal----  265 (425)
T PRK05476        199 LDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA----  265 (425)
T ss_pred             HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH----
Confidence            33333333444 79999999999999999999999999 899999888887666666653 221       22222    


Q ss_pred             cCCccEEEEecCCHHHHH-HHHHhhccCCeEEEEeccCCC
Q 047713          212 NGGVDRSVECTGSVQAMI-SAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       212 ~~~~d~Vid~~g~~~~~~-~~~~~l~~~~G~vv~~g~~~~  250 (329)
                       .++|+||+++|....+. ..+..++++ +.++.+|..+.
T Consensus       266 -~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d~  303 (425)
T PRK05476        266 -ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFDN  303 (425)
T ss_pred             -hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCCC
Confidence             25899999999877776 577888887 88888886554

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.14  E-value=6.6e-05  Score=66.52  Aligned_cols=96  Identities=14%  Similarity=0.257  Sum_probs=72.9

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .+.+|+|+|.|.+|+.+++.++.+|+ +|.++++++++.+.++++|.+.+.        + ..+.+.. .++|+||++++
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~~--------~-~~l~~~l-~~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPFH--------L-SELAEEV-GKIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeeec--------H-HHHHHHh-CCCCEEEECCC
Confidence            58999999999999999999999999 899999998888888888875331        1 1122222 25899999986


Q ss_pred             CHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          224 SVQAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       224 ~~~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      ..-.....++.++++ +.++.++...+.
T Consensus       220 ~~~i~~~~l~~~~~g-~vIIDla~~pgg  246 (296)
T PRK08306        220 ALVLTKEVLSKMPPE-ALIIDLASKPGG  246 (296)
T ss_pred             hhhhhHHHHHcCCCC-cEEEEEccCCCC
Confidence            533345666778887 899988765443

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.09  E-value=1.7e-07  Score=87.05  Aligned_cols=160  Identities=17%  Similarity=0.144  Sum_probs=102.9

Q ss_pred             ccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeeccc
Q 047713           16 IFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVG   95 (329)
Q Consensus        16 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~   95 (329)
                      --|.|+++.+.+|+++++.     +|++.+.+ ||-|.+|    ++.|......                      +...
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~----------------------g~~l  136 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTV----------------------GKVL  136 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCc----------------------hHHH
Confidence            5688999999999998876     56666666 7777777    3334432221                      1223


Q ss_pred             cccccccEEeeeccEEE---c-CCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           96 TSTFSEYTVTHVGCVAK---I-NPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        96 ~g~~a~~~~v~~~~~~~---~-p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      ++.|++++.++. .+..   | +..+|...+|.        -. ........++++|+|+|+|.+|..+++.++..|+.+
T Consensus       137 ~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~Av--------~l-a~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~  206 (417)
T TIGR01035       137 ERLFQKAFSVGK-RVRTETDISAGAVSISSAAV--------EL-AERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK  206 (417)
T ss_pred             HHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHHH--------HH-HHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence            468999998876 3332   3 22333222211        00 112233467899999999999999999999999668


Q ss_pred             EEEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHH
Q 047713          172 IIGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQA  227 (329)
Q Consensus       172 vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~  227 (329)
                      |++++++.++.+ ++++++.. .+.       +. .+.+.. .++|+||+|++.+..
T Consensus       207 V~v~~rs~~ra~~la~~~g~~-~i~-------~~-~l~~~l-~~aDvVi~aT~s~~~  253 (417)
T TIGR01035       207 ILIANRTYERAEDLAKELGGE-AVK-------FE-DLEEYL-AEADIVISSTGAPHP  253 (417)
T ss_pred             EEEEeCCHHHHHHHHHHcCCe-Eee-------HH-HHHHHH-hhCCEEEECCCCCCc
Confidence            999988887754 67777753 222       11 112211 258999999986554

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.04  E-value=7.5e-05  Score=68.49  Aligned_cols=92  Identities=27%  Similarity=0.369  Sum_probs=72.6

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      .+|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...++..|+. +.+       ..+.+     .+.|+||+++
T Consensus       193 l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal-----~~aDVVItaT  258 (406)
T TIGR00936       193 IAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA-----KIGDIFITAT  258 (406)
T ss_pred             CCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH-----hcCCEEEECC
Confidence            679999999999999999999999999 799998888877667766753 221       22222     2479999999


Q ss_pred             CCHHHHHH-HHHhhccCCeEEEEeccCC
Q 047713          223 GSVQAMIS-AFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       223 g~~~~~~~-~~~~l~~~~G~vv~~g~~~  249 (329)
                      |....+.. .+..++++ +.++.+|...
T Consensus       259 G~~~vI~~~~~~~mK~G-ailiN~G~~~  285 (406)
T TIGR00936       259 GNKDVIRGEHFENMKDG-AIVANIGHFD  285 (406)
T ss_pred             CCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence            98887764 77888887 8888887654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.00  E-value=0.00013  Score=63.20  Aligned_cols=132  Identities=17%  Similarity=0.213  Sum_probs=79.9

Q ss_pred             cccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 047713           98 TFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL  177 (329)
Q Consensus        98 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~  177 (329)
                      +|.+|.. +...+..+++.+++-.+. -+.+.. ....+.  ..+.++.+||-.|+|. |..++.+++ .|..+|++++.
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi  150 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI  150 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence            4555544 667788888887766532 111111 111111  1246789999999986 888876555 57657999999


Q ss_pred             ChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC--CccEEEEecCCH---HHHHHHHHhhccCCeEEEEecc
Q 047713          178 NPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG--GVDRSVECTGSV---QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       178 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~d~Vid~~g~~---~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ++...+.+++.-....+.  +       .+ .+..+  .+|+|+-.....   ..++...+.|+++ |.++..+.
T Consensus       151 s~~~l~~A~~n~~~~~~~--~-------~~-~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi  214 (250)
T PRK00517        151 DPQAVEAARENAELNGVE--L-------NV-YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGI  214 (250)
T ss_pred             CHHHHHHHHHHHHHcCCC--c-------eE-EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEEC
Confidence            999888776532111010  0       00 01112  589998655332   2456777889998 99998754

>PLN02494 adenosylhomocysteinase

Probab=97.94  E-value=0.00013  Score=67.62  Aligned_cols=92  Identities=22%  Similarity=0.365  Sum_probs=73.2

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      -.|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|...+ +       ..+.++     ..|+|+++.
T Consensus       252 LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv-~-------leEal~-----~ADVVI~tT  317 (477)
T PLN02494        252 IAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL-T-------LEDVVS-----EADIFVTTT  317 (477)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec-c-------HHHHHh-----hCCEEEECC
Confidence            569999999999999999999999999 89999888877666666776421 1       222222     379999999


Q ss_pred             CCHHHH-HHHHHhhccCCeEEEEeccCC
Q 047713          223 GSVQAM-ISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       223 g~~~~~-~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      |....+ ...++.++++ +.++.+|...
T Consensus       318 Gt~~vI~~e~L~~MK~G-AiLiNvGr~~  344 (477)
T PLN02494        318 GNKDIIMVDHMRKMKNN-AIVCNIGHFD  344 (477)
T ss_pred             CCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence            876654 7889999998 9999998743

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.89  E-value=3.7e-05  Score=63.33  Aligned_cols=112  Identities=18%  Similarity=0.209  Sum_probs=79.1

Q ss_pred             hcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHhcCCceee-CCC
Q 047713          123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFN----EAKKFGVTEFV-NPK  197 (329)
Q Consensus       123 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~----~~~~lg~~~~~-~~~  197 (329)
                      -++..+...|.  +.+...+++|++||-+|+|. |..++-+|+..+  +|+++++.++=.+    .++++|...+. ...
T Consensus        53 qtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g  127 (209)
T COG2518          53 QTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHG  127 (209)
T ss_pred             ceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC
Confidence            34444444444  56788999999999999874 999999999888  8999999887433    35668875433 222


Q ss_pred             CCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          198 DYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       198 ~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +..       +-+... .||.|+-+.+.+..-+..++.|+++ |+++..-.
T Consensus       128 DG~-------~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG  170 (209)
T COG2518         128 DGS-------KGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG  170 (209)
T ss_pred             Ccc-------cCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence            221       112223 7999998887765667888999998 99887644

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.80  E-value=5.3e-05  Score=67.74  Aligned_cols=107  Identities=21%  Similarity=0.224  Sum_probs=73.8

Q ss_pred             cEEEcCCCCCccchhcccccccchhhhhhhccCC----CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhH-H
Q 047713          109 CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKP----KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF-N  183 (329)
Q Consensus       109 ~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~----~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~-~  183 (329)
                      ..+++|+.+..+.++.. .+.++++.++. .+..    .++.+|+|.|+|.+|..+++.++..|.++|+.+++++++. +
T Consensus       140 ~a~~~~k~vr~et~i~~-~~~sv~~~Av~-~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         140 KAIKVGKRVRTETGISR-GAVSISSAAVE-LAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHhhhcCCCC-CCcCHHHHHHH-HHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            45667787777765543 35666666632 2222    4789999999999999999999988877898898887764 6


Q ss_pred             HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHH
Q 047713          184 EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQA  227 (329)
Q Consensus       184 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~  227 (329)
                      +++++|.. +++..    ++.+.+     ..+|+||.+++.+..
T Consensus       218 la~~~g~~-~~~~~----~~~~~l-----~~aDvVi~at~~~~~  251 (311)
T cd05213         218 LAKELGGN-AVPLD----ELLELL-----NEADVVISATGAPHY  251 (311)
T ss_pred             HHHHcCCe-EEeHH----HHHHHH-----hcCCEEEECCCCCch
Confidence            77888873 22211    122222     248999999987654

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK08324 short chain dehydrogenase; Validated

Probab=97.79  E-value=0.00021  Score=70.89  Aligned_cols=113  Identities=23%  Similarity=0.288  Sum_probs=72.9

Q ss_pred             cccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc
Q 047713           98 TFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD  176 (329)
Q Consensus        98 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~  176 (329)
                      ++++|..+++..++.+ +.++++++..-.          ....+..+|+++||+|+ |.+|.++++.+...|+ +|+.++
T Consensus       386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~----------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~  453 (681)
T PRK08324        386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQR----------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD  453 (681)
T ss_pred             hcCCccCCChhhhcce-eeehhhhhhhhc----------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence            5667777887777777 667777654110          00122346899999986 9999999999999999 899998


Q ss_pred             CChhhHHHH-HhcCC-----ceeeCCCCCCchHHHHHHhhh--cCCccEEEEecC
Q 047713          177 LNPSRFNEA-KKFGV-----TEFVNPKDYDKPVQQVIADMT--NGGVDRSVECTG  223 (329)
Q Consensus       177 ~~~~~~~~~-~~lg~-----~~~~~~~~~~~~~~~~~~~~~--~~~~d~Vid~~g  223 (329)
                      ++.++.+.+ ++++.     ....|..+.+ ...+.+.+..  .+++|+||+++|
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~-~v~~~~~~~~~~~g~iDvvI~~AG  507 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTDEA-AVQAAFEEAALAFGGVDIVVSNAG  507 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEEECCC
Confidence            888776543 33443     1122333221 2333333332  237999999998

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.71  E-value=0.002  Score=56.83  Aligned_cols=187  Identities=14%  Similarity=0.164  Sum_probs=106.2

Q ss_pred             EEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCC---CCccccCCccccccCCCceeeccccccc
Q 047713           23 GIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTD---RGVMINDGQSRFSIKGKPIYHFVGTSTF   99 (329)
Q Consensus        23 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~g~~   99 (329)
                      ++|++  |.++.+.+|+||+....               +.++.....+   ++-....++-|..+          .-.|
T Consensus        39 A~Vve--S~~~~i~vGerlyGy~P---------------~ashl~l~p~~v~~~~f~d~s~hR~~l----------~~~Y   91 (314)
T PF11017_consen   39 ATVVE--SRHPGIAVGERLYGYFP---------------MASHLVLEPGKVSPGGFRDVSPHRAGL----------PPIY   91 (314)
T ss_pred             EEEEe--eCCCCccCccEEEeecc---------------ccceeEEeccccCCCccccChhhhCcC----------chhh
Confidence            77777  89999999999996543               3333322211   11111111111111          1256


Q ss_pred             cccEEeeeccEEEcCCCCCccchhcccc-cccchhhhhhhcc---CCCCCCeEEEEcC-CHHHHHHHHHHH-HcCCCEEE
Q 047713          100 SEYTVTHVGCVAKINPAAPLDKVCVLSC-GISTGFGATVNVA---KPKKGQSVAIFGL-GAVGLAAAEGAR-VSGASRII  173 (329)
Q Consensus       100 a~~~~v~~~~~~~~p~~~~~~~aa~~~~-~~~ta~~~l~~~~---~~~~g~~VlI~Ga-g~iG~aai~la~-~~G~~~vv  173 (329)
                      -+|.++..+..+.-    +.+..-++.- -+.|.|-. .+..   ..-..+.|+|..+ +-+++..+..++ ..+.-++|
T Consensus        92 N~Y~r~~~d~~y~~----~~e~~~~LlrPLf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~v  166 (314)
T PF11017_consen   92 NQYLRVSADPAYDP----EREDWQMLLRPLFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVV  166 (314)
T ss_pred             hceeecCCCcccCc----chhHHHHHHHHHHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEE
Confidence            67777665544311    1122222222 24444432 2211   1233456777754 889998888888 44444899


Q ss_pred             EEcCChhhHHHHHhcCC-ceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          174 GVDLNPSRFNEAKKFGV-TEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       174 ~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +++ |+.+.++.+.+|. +.++.+++        +.++....--+++|..|........-+.+...--..+.+|.+..
T Consensus       167 glT-S~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~  235 (314)
T PF11017_consen  167 GLT-SARNVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW  235 (314)
T ss_pred             EEe-cCcchhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence            996 5666779999996 67776643        33333344568899999988877777777654134566665443

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.70  E-value=4.5e-05  Score=74.02  Aligned_cols=81  Identities=22%  Similarity=0.305  Sum_probs=59.1

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC---------------------hhhHHHHHhcCCceeeCCCC-
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN---------------------PSRFNEAKKFGVTEFVNPKD-  198 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~---------------------~~~~~~~~~lg~~~~~~~~~-  198 (329)
                      ..++|++|+|+|+|++|+++++.++..|+ +|++++..                     +.+.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            46789999999999999999999999999 68888742                     34567788899877665433 


Q ss_pred             CCchHHHHHHhhhcCCccEEEEecCCHHH
Q 047713          199 YDKPVQQVIADMTNGGVDRSVECTGSVQA  227 (329)
Q Consensus       199 ~~~~~~~~~~~~~~~~~d~Vid~~g~~~~  227 (329)
                      .+... ..    ...++|+||+++|....
T Consensus       212 ~~~~~-~~----~~~~~D~Vi~AtG~~~~  235 (564)
T PRK12771        212 EDITL-EQ----LEGEFDAVFVAIGAQLG  235 (564)
T ss_pred             CcCCH-HH----HHhhCCEEEEeeCCCCC
Confidence            11001 11    12369999999997543

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.64  E-value=0.00046  Score=63.20  Aligned_cols=96  Identities=25%  Similarity=0.250  Sum_probs=65.8

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +.+|+|+|+|.+|+.+++.|+.+|+ +|++++.++++.+.+. .++........+    . ..+.+.. ..+|+||++++
T Consensus       167 ~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~----~-~~l~~~l-~~aDvVI~a~~  239 (370)
T TIGR00518       167 PGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN----A-YEIEDAV-KRADLLIGAVL  239 (370)
T ss_pred             CceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC----H-HHHHHHH-ccCCEEEEccc
Confidence            4568899999999999999999999 7999999888877664 455432111111    1 1222222 25899999973


Q ss_pred             ---C--HH-HHHHHHHhhccCCeEEEEeccC
Q 047713          224 ---S--VQ-AMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       224 ---~--~~-~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                         .  +. .....++.++++ +.++.++..
T Consensus       240 ~~g~~~p~lit~~~l~~mk~g-~vIvDva~d  269 (370)
T TIGR00518       240 IPGAKAPKLVSNSLVAQMKPG-AVIVDVAID  269 (370)
T ss_pred             cCCCCCCcCcCHHHHhcCCCC-CEEEEEecC
Confidence               2  21 135677778887 999998753

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.58  E-value=0.0019  Score=57.02  Aligned_cols=95  Identities=14%  Similarity=0.266  Sum_probs=67.6

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .|++++|+|.|.+|.+++..++.+|+ +|++.++++++.+.+.++|...+ .       +. .+.+.. ..+|+||++++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~~-~l~~~l-~~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------LN-KLEEKV-AEIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------HH-HHHHHh-ccCCEEEECCC
Confidence            48899999999999999999999998 89999888887777766665322 1       11 122222 25899999985


Q ss_pred             CHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          224 SVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       224 ~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      ..-.-...++.++++ ..++.++....
T Consensus       219 ~~ii~~~~l~~~k~~-aliIDlas~Pg  244 (287)
T TIGR02853       219 ALVLTADVLSKLPKH-AVIIDLASKPG  244 (287)
T ss_pred             hHHhCHHHHhcCCCC-eEEEEeCcCCC
Confidence            432224456677776 78888876443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.52  E-value=0.00061  Score=60.28  Aligned_cols=97  Identities=23%  Similarity=0.333  Sum_probs=62.2

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhcCCccE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~d~  217 (329)
                      ..++++||-.|+|. |..++.+++ .|..+|++++.++...+.+++.    +....+.....+      ......+++|+
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~------~~~~~~~~fDl  228 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY------LEQPIEGKADV  228 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc------cccccCCCceE
Confidence            45789999999877 877777665 5666999999999887776653    211111000000      11122347999


Q ss_pred             EEEecCCH---HHHHHHHHhhccCCeEEEEecc
Q 047713          218 SVECTGSV---QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       218 Vid~~g~~---~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      |+......   ..+....++|+++ |.++..+.
T Consensus       229 Vvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi  260 (288)
T TIGR00406       229 IVANILAEVIKELYPQFSRLVKPG-GWLILSGI  260 (288)
T ss_pred             EEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            98654322   3456677889998 99987764

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.47  E-value=0.00086  Score=62.46  Aligned_cols=93  Identities=22%  Similarity=0.321  Sum_probs=71.2

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      .-.|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|+...      +  +.+.+     ...|+|+.+
T Consensus       251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~------~--leell-----~~ADIVI~a  316 (476)
T PTZ00075        251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV------T--LEDVV-----ETADIFVTA  316 (476)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec------c--HHHHH-----hcCCEEEEC
Confidence            3479999999999999999999999999 89999887776655544564321      1  32222     248999999


Q ss_pred             cCCHHHHH-HHHHhhccCCeEEEEeccCC
Q 047713          222 TGSVQAMI-SAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       222 ~g~~~~~~-~~~~~l~~~~G~vv~~g~~~  249 (329)
                      .|....+. ..++.++++ +.++.+|..+
T Consensus       317 tGt~~iI~~e~~~~MKpG-AiLINvGr~d  344 (476)
T PTZ00075        317 TGNKDIITLEHMRRMKNN-AIVGNIGHFD  344 (476)
T ss_pred             CCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence            98766664 788899998 9999988653

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.33  E-value=0.0014  Score=55.22  Aligned_cols=79  Identities=23%  Similarity=0.342  Sum_probs=59.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC----ceeeCCCCCCchHHHHHHhhhcC--Cc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV----TEFVNPKDYDKPVQQVIADMTNG--GV  215 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~----~~~~~~~~~~~~~~~~~~~~~~~--~~  215 (329)
                      +++.++|+|+ +++|.+++..+...|+ +|+.+.+..++++. +.+++.    ...+|..+.. +....+..+...  .+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~-~~~~~i~~~~~~~g~i   82 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRA-AVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHH-HHHHHHHHHHHhhCcc
Confidence            3578999997 9999999999999999 89999999998875 566773    2233444332 355556656555  69


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |+.++..|.
T Consensus        83 DiLvNNAGl   91 (246)
T COG4221          83 DILVNNAGL   91 (246)
T ss_pred             cEEEecCCC
Confidence            999999883

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.28  E-value=0.0011  Score=51.50  Aligned_cols=73  Identities=29%  Similarity=0.401  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCc--eeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVT--EFVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      ++.+++|+|+|++|.+++..+...|+++++.+.++.+|.+. +++++..  ..+...+    +...+     ..+|+||+
T Consensus        11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI~   81 (135)
T PF01488_consen   11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVIN   81 (135)
T ss_dssp             TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEEE
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEEE
Confidence            58999999999999999999999999889999999887665 4556322  1222221    22111     15899999


Q ss_pred             ecCCH
Q 047713          221 CTGSV  225 (329)
Q Consensus       221 ~~g~~  225 (329)
                      +++.+
T Consensus        82 aT~~~   86 (135)
T PF01488_consen   82 ATPSG   86 (135)
T ss_dssp             -SSTT
T ss_pred             ecCCC
Confidence            98754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.21  E-value=0.0011  Score=61.89  Aligned_cols=161  Identities=15%  Similarity=0.151  Sum_probs=95.1

Q ss_pred             ccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeeccc
Q 047713           16 IFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVG   95 (329)
Q Consensus        16 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~   95 (329)
                      --|+|+++.+.+|+++++..-.|+.-+         |..|+.-+ ..|......                      +...
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~qI---------lgQvk~a~-~~a~~~g~~----------------------g~~l  138 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEPQI---------LGQVKDAY-ALAQEAGTV----------------------GTIL  138 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCChHH---------HHHHHHHH-HHHHHcCCc----------------------hHHH
Confidence            469999999999999988755555433         23333221 112111100                      0112


Q ss_pred             cccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhcc---CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEE
Q 047713           96 TSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVA---KPKKGQSVAIFGLGAVGLAAAEGARVSGASRI  172 (329)
Q Consensus        96 ~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~g~~VlI~Gag~iG~aai~la~~~G~~~v  172 (329)
                      ++.|++.+.++.        .+..+. +....+.++++.++....   .-.++.+|+|+|+|.+|.++++.++..|+++|
T Consensus       139 ~~lf~~a~~~~k--------~v~~~t-~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V  209 (423)
T PRK00045        139 NRLFQKAFSVAK--------RVRTET-GIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI  209 (423)
T ss_pred             HHHHHHHHHHHh--------hHhhhc-CCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence            345666555543        222211 122224455555532221   12578999999999999999999999998788


Q ss_pred             EEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHH
Q 047713          173 IGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQA  227 (329)
Q Consensus       173 v~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~  227 (329)
                      +.+.++.++.+ +++++|.+ +++       +. .+.+.. .++|+||+++|.+..
T Consensus       210 ~v~~r~~~ra~~la~~~g~~-~~~-------~~-~~~~~l-~~aDvVI~aT~s~~~  255 (423)
T PRK00045        210 TVANRTLERAEELAEEFGGE-AIP-------LD-ELPEAL-AEADIVISSTGAPHP  255 (423)
T ss_pred             EEEeCCHHHHHHHHHHcCCc-Eee-------HH-HHHHHh-ccCCEEEECCCCCCc
Confidence            88888887754 67778753 222       21 112211 258999999986544

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.21  E-value=0.0029  Score=56.65  Aligned_cols=103  Identities=20%  Similarity=0.217  Sum_probs=71.3

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      +.+...++++++||..|+| .|..++.+++..+. ..|++++.+++..+.++    ++|.+.+... ..+  ..+...+ 
T Consensus        72 ll~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i-~gD--~~~~~~~-  146 (322)
T PRK13943         72 FMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFV-CGD--GYYGVPE-  146 (322)
T ss_pred             HHHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-eCC--hhhcccc-
Confidence            3455678899999999997 59999999998763 36999999998766554    3565433222 111  2211111 


Q ss_pred             hcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713          211 TNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       211 ~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                       .+.+|+|+.+.+........++.|+++ |+++..
T Consensus       147 -~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~  179 (322)
T PRK13943        147 -FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  179 (322)
T ss_pred             -cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence             136999999887666666788899998 987764

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.17  E-value=0.0053  Score=51.11  Aligned_cols=102  Identities=24%  Similarity=0.404  Sum_probs=69.0

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcC-CceeeCCCCCCchHHHHHHhhh
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAK----KFG-VTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~----~lg-~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      ....+.++++|+..|+|. |..++.+|+..+. .+|++++.+++..+.++    .++ .+.+.... .+  ..+.+... 
T Consensus        34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d--~~~~l~~~-  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GE--APEILFTI-  108 (198)
T ss_pred             HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-ec--hhhhHhhc-
Confidence            456788999999999987 9999999887642 38999999998877654    455 22222111 11  22222222 


Q ss_pred             cCCccEEEEecCC---HHHHHHHHHhhccCCeEEEEe
Q 047713          212 NGGVDRSVECTGS---VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       212 ~~~~d~Vid~~g~---~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      .+.+|.||...+.   ...+..+.+.|+++ |+++..
T Consensus       109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~  144 (198)
T PRK00377        109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID  144 (198)
T ss_pred             CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence            2379999975442   45677888899998 998753

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.16  E-value=0.008  Score=51.25  Aligned_cols=102  Identities=25%  Similarity=0.366  Sum_probs=64.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCceee--CCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF---GVTEFV--NPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l---g~~~~~--~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      ++++|+|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++   +....+  |..+. ....+.+++...  ++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSST-ESARNVIEKAAKVLNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCH-HHHHHHHHHHHHHhCC
Confidence            4689999987 9999999999999999 788888888776554 222   211222  22221 123333333222  36


Q ss_pred             ccEEEEecCCHH-----------------------HHHHHHHhhccCCeEEEEeccC
Q 047713          215 VDRSVECTGSVQ-----------------------AMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       215 ~d~Vid~~g~~~-----------------------~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +|.++.+.|...                       .++..+..+.++ |+++.++..
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~  137 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM  137 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence            899998886321                       134445556666 888888754

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.15  E-value=0.0033  Score=57.86  Aligned_cols=110  Identities=22%  Similarity=0.241  Sum_probs=74.3

Q ss_pred             cccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHH
Q 047713          128 GISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVI  207 (329)
Q Consensus       128 ~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  207 (329)
                      +....+..+.....+++|++||.+|+| .|..++.+++..|+ +|++++.+++..+.+++......+.....+  +    
T Consensus       151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--~----  222 (383)
T PRK11705        151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRLQD--Y----  222 (383)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEECc--h----
Confidence            333444446677788999999999985 57788888988888 899999999999988765321111111111  2    


Q ss_pred             HhhhcCCccEEEE-----ecCC---HHHHHHHHHhhccCCeEEEEecc
Q 047713          208 ADMTNGGVDRSVE-----CTGS---VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       208 ~~~~~~~~d~Vid-----~~g~---~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .++ .+.+|.|+.     .+|.   ...++.+.+.|+++ |.++....
T Consensus       223 ~~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i  268 (383)
T PRK11705        223 RDL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI  268 (383)
T ss_pred             hhc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            112 346998863     3332   34577888899998 99887643

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.04  E-value=0.0091  Score=48.37  Aligned_cols=104  Identities=19%  Similarity=0.320  Sum_probs=70.3

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhhc
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      +...++++|+.++=+|+|. |..++++++..-..+|++++.+++..+..+    +||.+.+...+-.   ..+.+..+. 
T Consensus        27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~---Ap~~L~~~~-  101 (187)
T COG2242          27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGD---APEALPDLP-  101 (187)
T ss_pred             HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEecc---chHhhcCCC-
Confidence            3457889999777778763 777788886555559999999999887654    5776644332211   222232211 


Q ss_pred             CCccEEEEecC--CHHHHHHHHHhhccCCeEEEEecc
Q 047713          213 GGVDRSVECTG--SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       213 ~~~d~Vid~~g--~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                       .+|.+|---|  -+..++.+++.|+++ |++|.-..
T Consensus       102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai  136 (187)
T COG2242         102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI  136 (187)
T ss_pred             -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence             5899884433  345688999999998 99887654

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.0065  Score=53.33  Aligned_cols=78  Identities=15%  Similarity=0.270  Sum_probs=54.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhh---hcCCccEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADM---TNGGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~---~~~~~d~V  218 (329)
                      .+++++|+|+ |.+|.++++.+...|+ +|+.+++++++.+.+.+.+.+.+ .|..+. +++.+.+.+.   .++.+|++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~-~~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAEP-ESIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCCH-HHHHHHHHHHHHHcCCCccEE
Confidence            3678999987 9999999998888898 89999888888777666554432 233332 1233333332   33479999


Q ss_pred             EEecC
Q 047713          219 VECTG  223 (329)
Q Consensus       219 id~~g  223 (329)
                      |++.|
T Consensus        81 i~~Ag   85 (277)
T PRK05993         81 FNNGA   85 (277)
T ss_pred             EECCC
Confidence            99876

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=96.91  E-value=0.0063  Score=49.88  Aligned_cols=78  Identities=24%  Similarity=0.316  Sum_probs=55.4

Q ss_pred             CCeEEEEc-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC---ceeeCCCCCCchHHHHHHhhhcC--CccEE
Q 047713          145 GQSVAIFG-LGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV---TEFVNPKDYDKPVQQVIADMTNG--GVDRS  218 (329)
Q Consensus       145 g~~VlI~G-ag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~---~~~~~~~~~~~~~~~~~~~~~~~--~~d~V  218 (329)
                      |-+|||+| +++||++.++-...+|- +|+.+.+++++++.++..-.   +.+.|..+.+ .....+.++...  ..+++
T Consensus         5 gnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~-~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           5 GNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRD-SRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchh-hHHHHHHHHHhhCCchhee
Confidence            78999996 59999999998889997 89999999999998876443   3455544432 122222223333  58999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      ++++|.
T Consensus        83 iNNAGI   88 (245)
T COG3967          83 INNAGI   88 (245)
T ss_pred             eecccc
Confidence            988874

>PRK12742 oxidoreductase; Provisional

Probab=96.90  E-value=0.024  Score=48.23  Aligned_cols=77  Identities=22%  Similarity=0.283  Sum_probs=47.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH-HHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNE-AKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~-~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      +++++||+|+ |.+|.++++.+...|+ +|+.+.. ++++.+. ..+++...+ .|..+. ..+.+.+.+  .+++|++|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~--~~~id~li   80 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSADR-DAVIDVVRK--SGALDILV   80 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCCH-HHHHHHHHH--hCCCcEEE
Confidence            3789999986 9999999999988998 6665543 4444433 344554332 232221 122233322  13699999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      ++.|.
T Consensus        81 ~~ag~   85 (237)
T PRK12742         81 VNAGI   85 (237)
T ss_pred             ECCCC
Confidence            99874

>PRK06182 short chain dehydrogenase; Validated

Probab=96.90  E-value=0.0068  Score=53.01  Aligned_cols=79  Identities=16%  Similarity=0.334  Sum_probs=54.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhh--cCCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMT--NGGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~--~~~~d~Vi  219 (329)
                      ++++++|+|+ |.+|.++++.+...|+ +|+.+++++++.+.+...+...+ .|..+. +++.+.+++..  .+++|++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~~~id~li   79 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTDE-ASIKAAVDTIIAEEGRIDVLV   79 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCCH-HHHHHHHHHHHHhcCCCCEEE
Confidence            3678999987 9999999999888898 88988888877765554444322 233332 12434444332  23799999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      ++.|.
T Consensus        80 ~~ag~   84 (273)
T PRK06182         80 NNAGY   84 (273)
T ss_pred             ECCCc
Confidence            99873

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.0066  Score=53.13  Aligned_cols=76  Identities=18%  Similarity=0.324  Sum_probs=53.4

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhc--CCccEEEEe
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTN--GGVDRSVEC  221 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~--~~~d~Vid~  221 (329)
                      +++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+...+...+ .|..+. .++.+.+.....  +++|++|++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id~vi~~   79 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVNDG-AALARLAEELEAEHGGLDVLINN   79 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCCH-HHHHHHHHHHHHhcCCCCEEEEC
Confidence            47899987 9999999999988898 88888888877776665554332 343332 124444444322  379999999


Q ss_pred             cC
Q 047713          222 TG  223 (329)
Q Consensus       222 ~g  223 (329)
                      .|
T Consensus        80 ag   81 (274)
T PRK05693         80 AG   81 (274)
T ss_pred             CC
Confidence            98

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.86  E-value=0.0017  Score=54.41  Aligned_cols=103  Identities=21%  Similarity=0.249  Sum_probs=66.4

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHH----HhcCCceee-CCCCCCchHHHHHHh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS-RIIGVDLNPSRFNEA----KKFGVTEFV-NPKDYDKPVQQVIAD  209 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~-~vv~~~~~~~~~~~~----~~lg~~~~~-~~~~~~~~~~~~~~~  209 (329)
                      +.+.+.+++|++||-+|+|. |..++-+++..|.. .|++++..++-.+.+    +.++.+.+. ...+.       ..-
T Consensus        64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg-------~~g  135 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG-------SEG  135 (209)
T ss_dssp             HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G-------GGT
T ss_pred             HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch-------hhc
Confidence            56778899999999998863 88888888877743 699999988755443    445654322 11111       111


Q ss_pred             hhc-CCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          210 MTN-GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       210 ~~~-~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ... +.||.|+-+.+.+..-...++.|+++ |+++..-.
T Consensus       136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi~  173 (209)
T PF01135_consen  136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPIG  173 (209)
T ss_dssp             TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEES
T ss_pred             cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEEc
Confidence            112 37999998877665556788899998 99988543

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.83  E-value=0.005  Score=53.86  Aligned_cols=102  Identities=25%  Similarity=0.296  Sum_probs=62.2

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.+++++++|++||-+|+| -|..++.+|+..|+ +|++++.+++..+.++    +.|....+...-.+  +    +++.
T Consensus        54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D--~----~~~~  125 (273)
T PF02353_consen   54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD--Y----RDLP  125 (273)
T ss_dssp             HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES---G----GG--
T ss_pred             HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee--c----cccC
Confidence            5788899999999999987 47778888888899 8999999999887664    45543211111111  1    2221


Q ss_pred             cCCccEEE-----EecCC---HHHHHHHHHhhccCCeEEEEecc
Q 047713          212 NGGVDRSV-----ECTGS---VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~~~~d~Vi-----d~~g~---~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                       +.+|.|+     +.+|.   +..+..+-+.|+|+ |+++.-..
T Consensus       126 -~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i  167 (273)
T PF02353_consen  126 -GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI  167 (273)
T ss_dssp             --S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred             -CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence             2688875     44542   34578888899998 99875543

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.81  E-value=0.017  Score=52.76  Aligned_cols=95  Identities=15%  Similarity=0.209  Sum_probs=64.0

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC---C-ceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG---V-TEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg---~-~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      .+|||+|+|.+|+.+++.+...+...|..++++.++.+.+....   . ...+|..+.     +.+.++.. ++|+||++
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~-----~al~~li~-~~d~VIn~   75 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADV-----DALVALIK-DFDLVINA   75 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccCh-----HHHHHHHh-cCCEEEEe
Confidence            47899999999999999887777458999999999998887664   2 234444332     12333322 35999999


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          222 TGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+........-.|++.+ =.++....
T Consensus        76 ~p~~~~~~i~ka~i~~g-v~yvDts~  100 (389)
T COG1748          76 APPFVDLTILKACIKTG-VDYVDTSY  100 (389)
T ss_pred             CCchhhHHHHHHHHHhC-CCEEEccc
Confidence            97655554444455554 45665554

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.81  E-value=0.015  Score=47.35  Aligned_cols=94  Identities=21%  Similarity=0.311  Sum_probs=61.9

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC--
Q 047713          148 VAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS--  224 (329)
Q Consensus       148 VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~--  224 (329)
                      |+|+|+ |.+|..+++.+...|. +|+++.+++++.+.  ..+.+.+. ..-.+  . ..+.+... ++|.||.+.|.  
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~-~d~~d--~-~~~~~al~-~~d~vi~~~~~~~   72 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQ-GDLFD--P-DSVKAALK-GADAVIHAAGPPP   72 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEE-SCTTC--H-HHHHHHHT-TSSEEEECCHSTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccce-eeehh--h-hhhhhhhh-hcchhhhhhhhhc
Confidence            689997 9999999999999997 89999999988776  34444332 11122  2 23333332 69999999973  


Q ss_pred             --HHHHHHHHHhhccC-CeEEEEeccCC
Q 047713          225 --VQAMISAFECVHDG-WGVAVLVGVPN  249 (329)
Q Consensus       225 --~~~~~~~~~~l~~~-~G~vv~~g~~~  249 (329)
                        .......++.++.. -.+++.++...
T Consensus        73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             ccccccccccccccccccccceeeeccc
Confidence              23345555555443 13777776543

...

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.76  E-value=0.023  Score=47.71  Aligned_cols=104  Identities=17%  Similarity=0.181  Sum_probs=71.9

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCC-CCchHHHHHHhhh
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKD-YDKPVQQVIADMT  211 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~-~~~~~~~~~~~~~  211 (329)
                      ..++....++||-+|.+ +|..++++|..+. -.++++++.++++.+.+++    .|....+.... .+  ..+.+.+..
T Consensus        53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gd--al~~l~~~~  129 (219)
T COG4122          53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGD--ALDVLSRLL  129 (219)
T ss_pred             HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCc--HHHHHHhcc
Confidence            34556678889988764 5888899998776 3389999999999887754    56554322222 22  555555533


Q ss_pred             cCCccEEEEecC---CHHHHHHHHHhhccCCeEEEEe
Q 047713          212 NGGVDRSVECTG---SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       212 ~~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      .+.||+||--..   .+..++.++++|+++ |.++.=
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~D  165 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVAD  165 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEe
Confidence            458999973332   456789999999997 776643

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.72  E-value=0.02  Score=48.57  Aligned_cols=104  Identities=21%  Similarity=0.257  Sum_probs=73.4

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      +....++.+|++|+-.|.|+ |.+++.||+..|. .+|++.+..++..+.+++    +|....+.....|      +++.
T Consensus        86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D------v~~~  158 (256)
T COG2519          86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD------VREG  158 (256)
T ss_pred             HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc------cccc
Confidence            45678999999999887663 8888999987765 599999999988877654    3433322222211      2222


Q ss_pred             hcC-CccEEE-EecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          211 TNG-GVDRSV-ECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       211 ~~~-~~d~Vi-d~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ..+ .+|.|| |---..+.++.+.+.|.++ |.++.+..
T Consensus       159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P  196 (256)
T COG2519         159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP  196 (256)
T ss_pred             ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence            223 789875 5544567889999999998 99988854

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.69  E-value=0.0043  Score=52.27  Aligned_cols=103  Identities=22%  Similarity=0.265  Sum_probs=67.5

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      +.+...+++|++||-.|+|. |..++.+++..+. .+|++++.+++..+.+++    +|...+. ....+  ..   ...
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~-~~~gd--~~---~~~  140 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVE-VIVGD--GT---LGY  140 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeE-EEECC--cc---cCC
Confidence            45667889999999998864 7777888887653 389999999987776654    3432211 11111  10   001


Q ss_pred             hc-CCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          211 TN-GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       211 ~~-~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .. +.||+|+-........+..++.|+++ |+++..-
T Consensus       141 ~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~~  176 (212)
T PRK13942        141 EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIPV  176 (212)
T ss_pred             CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEEE
Confidence            12 37999876554555667788899998 9987753

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.67  E-value=0.011  Score=44.67  Aligned_cols=104  Identities=20%  Similarity=0.309  Sum_probs=66.7

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhc
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .....+.++++|+-.|+|. |..+..+++..+..+|++++.++...+.+++    ++...+.... .+  ....+. ...
T Consensus        12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~--~~~~~~-~~~   86 (124)
T TIGR02469        12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVE-GD--APEALE-DSL   86 (124)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEe-cc--ccccCh-hhc
Confidence            3445667788899999876 8888899988754589999999987776543    4432211100 11  110011 112


Q ss_pred             CCccEEEEecCC---HHHHHHHHHhhccCCeEEEEec
Q 047713          213 GGVDRSVECTGS---VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       213 ~~~d~Vid~~g~---~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +.+|+|+-..+.   .+.++.+.+.|+++ |.++...
T Consensus        87 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~  122 (124)
T TIGR02469        87 PEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA  122 (124)
T ss_pred             CCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence            379999865432   34678888999998 9987653

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.67  E-value=0.013  Score=48.99  Aligned_cols=104  Identities=18%  Similarity=0.226  Sum_probs=65.8

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      +.+...++++++||-.|+|. |..++.+++..+ ..+|++++.+++..+.+++    ++....+.....+  ..+.+.  
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d--~~~~~~--  138 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD--GKRGLE--  138 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC--cccCCc--
Confidence            34566788999999998864 777777777664 2389999999887665543    4432111111111  111111  


Q ss_pred             hcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713          211 TNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       211 ~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      ..+.+|+|+-+.......+...+.|+++ |+++..
T Consensus       139 ~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~  172 (205)
T PRK13944        139 KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP  172 (205)
T ss_pred             cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence            1237999986655555556778899998 998764

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.67  E-value=0.0065  Score=49.12  Aligned_cols=100  Identities=21%  Similarity=0.238  Sum_probs=62.4

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCC-CCC--------------CchHHHHHHh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNP-KDY--------------DKPVQQVIAD  209 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~-~~~--------------~~~~~~~~~~  209 (329)
                      .-+|+|+|+|.+|+.|+.+++.+|+ +|+..+...++.+..+.++...+... .+.              .......+.+
T Consensus        20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            4688999999999999999999999 89999999998888888877544331 110              0112222222


Q ss_pred             hhcCCccEEEEecC-----CHHH-HHHHHHhhccCCeEEEEecc
Q 047713          210 MTNGGVDRSVECTG-----SVQA-MISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       210 ~~~~~~d~Vid~~g-----~~~~-~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ... .+|+||.+.=     .+.. .+..++.++++ ..++.+..
T Consensus        99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~  140 (168)
T PF01262_consen   99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISC  140 (168)
T ss_dssp             HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTG
T ss_pred             HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEe
Confidence            211 3688874321     1111 24556678876 77887764

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.65  E-value=0.0078  Score=44.78  Aligned_cols=95  Identities=21%  Similarity=0.267  Sum_probs=61.4

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHhcC----CceeeCCCCCCchHHHHHHhhhcCCccEE
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARV-SGASRIIGVDLNPSRFNEAKKFG----VTEFVNPKDYDKPVQQVIADMTNGGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~-~G~~~vv~~~~~~~~~~~~~~lg----~~~~~~~~~~~~~~~~~~~~~~~~~~d~V  218 (329)
                      ||.+||-.|+|. |..++.+++. .+. +|++++.+++..+.+++.-    ...-+.....+  +  .......+++|+|
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d--~--~~~~~~~~~~D~v   74 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQGD--A--EFDPDFLEPFDLV   74 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC--C--HGGTTTSSCEEEE
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc--c--ccCcccCCCCCEE
Confidence            688999998874 8888888884 666 8999999999888776532    21111111112  2  1111112379999


Q ss_pred             EEec-CC---H------HHHHHHHHhhccCCeEEEEe
Q 047713          219 VECT-GS---V------QAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       219 id~~-g~---~------~~~~~~~~~l~~~~G~vv~~  245 (329)
                      +... ..   .      ..++...+.|+++ |+++.-
T Consensus        75 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~  110 (112)
T PF12847_consen   75 ICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN  110 (112)
T ss_dssp             EECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            8765 21   1      2377888899998 988753

...

>PRK04148 hypothetical protein; Provisional

Probab=96.64  E-value=0.063  Score=41.31  Aligned_cols=87  Identities=18%  Similarity=0.232  Sum_probs=61.1

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCC-CCCCchHHHHHHhhhcCCccEEEE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNP-KDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      ..++.++++.|.| .|...+..+...|. .|++++.+++..+.+++.+.+.+.+. .+.+..+        -+++|+|+.
T Consensus        14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~--------y~~a~liys   83 (134)
T PRK04148         14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEI--------YKNAKLIYS   83 (134)
T ss_pred             cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHH--------HhcCCEEEE
Confidence            3456789999999 88756666667898 99999999999999998887554432 2222011        126899998


Q ss_pred             ecCCHHHHHHHHHhhccC
Q 047713          221 CTGSVQAMISAFECVHDG  238 (329)
Q Consensus       221 ~~g~~~~~~~~~~~l~~~  238 (329)
                      .-..++..+..+++.+.-
T Consensus        84 irpp~el~~~~~~la~~~  101 (134)
T PRK04148         84 IRPPRDLQPFILELAKKI  101 (134)
T ss_pred             eCCCHHHHHHHHHHHHHc
Confidence            887766666666655543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.64  E-value=0.03  Score=52.92  Aligned_cols=78  Identities=23%  Similarity=0.371  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhH-HHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP--SRF-NEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~--~~~-~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      +++++||+|+ |.+|.++++.+...|+ +|+.++.++  ++. +..++++... .+|..+.+ +..+.+.....  +++|
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITAPD-APARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHHHHhCCCCC
Confidence            5789999986 9999999999988999 787776643  222 2334455432 23433322 23333333322  3699


Q ss_pred             EEEEecC
Q 047713          217 RSVECTG  223 (329)
Q Consensus       217 ~Vid~~g  223 (329)
                      ++|++.|
T Consensus       287 ~vi~~AG  293 (450)
T PRK08261        287 IVVHNAG  293 (450)
T ss_pred             EEEECCC
Confidence            9999988

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.63  E-value=0.042  Score=45.23  Aligned_cols=100  Identities=25%  Similarity=0.249  Sum_probs=61.2

Q ss_pred             ccCCCCCCeEEEEcCCHHHHHHHHHHH-HcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcC-Cc
Q 047713          139 VAKPKKGQSVAIFGLGAVGLAAAEGAR-VSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNG-GV  215 (329)
Q Consensus       139 ~~~~~~g~~VlI~Gag~iG~aai~la~-~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~-~~  215 (329)
                      ...+++|++||..|+|+-+. +..+++ ..+..+|++++.++..    +..+...+ .+..+.+  ....+.+..+. ++
T Consensus        27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~--~~~~l~~~~~~~~~   99 (188)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEE--VLNKIRERVGDDKV   99 (188)
T ss_pred             hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChh--HHHHHHHHhCCCCc
Confidence            34568999999999876454 444444 3344489999998754    11233221 1222221  33445554545 89


Q ss_pred             cEEEE-e----cCC------------HHHHHHHHHhhccCCeEEEEec
Q 047713          216 DRSVE-C----TGS------------VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       216 d~Vid-~----~g~------------~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+|+. .    .|.            ...+..+.++|+++ |+++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~  146 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV  146 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence            99994 2    221            34677888899998 9988753

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.62  E-value=0.035  Score=48.46  Aligned_cols=110  Identities=22%  Similarity=0.261  Sum_probs=68.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-ee----CCCCCCchHHHHHHhhh--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE-FV----NPKDYDKPVQQVIADMT--  211 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~-~~----~~~~~~~~~~~~~~~~~--  211 (329)
                      .|+.|+|+|| ++||.+++.-+...|+ +++.+.+..++++.+    ++++... ++    |..+. ++..+.+.+..  
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~-~~~~~~~~~~~~~   88 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDE-ESVKKFVEWAIRH   88 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCH-HHHHHHHHHHHHh
Confidence            4789999997 9999998888888899 566665667666554    4444433 21    22222 22444443332  


Q ss_pred             cCCccEEEEecCCHH-------------------------HHHHHHHhhccCC-eEEEEeccCCCCCccc
Q 047713          212 NGGVDRSVECTGSVQ-------------------------AMISAFECVHDGW-GVAVLVGVPNKDDAFK  255 (329)
Q Consensus       212 ~~~~d~Vid~~g~~~-------------------------~~~~~~~~l~~~~-G~vv~~g~~~~~~~~~  255 (329)
                      -|++|+.++..|...                         ....++..++..+ |+|+.++...+....+
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P  158 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP  158 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence            247999999887421                         2334455555443 8999998655544333

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.042  Score=46.74  Aligned_cols=79  Identities=23%  Similarity=0.328  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC---ceee--CCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGV---TEFV--NPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~---~~~~--~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      .+.+++|+|+ |.+|..+++.+...|+ +|+++.+++++.+.+ +++..   ...+  |..+. .++.+.++++..  ++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDE-ADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            3688999987 9999999998888898 788888877665433 33321   1111  22221 123444444322  36


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|++.|.
T Consensus        83 ~d~vi~~ag~   92 (237)
T PRK07326         83 LDVLIANAGV   92 (237)
T ss_pred             CCEEEECCCC
Confidence            9999998763

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.59  E-value=0.007  Score=52.61  Aligned_cols=110  Identities=23%  Similarity=0.281  Sum_probs=74.7

Q ss_pred             hhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHH
Q 047713          132 GFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVI  207 (329)
Q Consensus       132 a~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~  207 (329)
                      .+..+..++++++|.+||=+|+|- |.+++..|+..|+ +|++++.|++..+.+++    .|...-+...-.      ..
T Consensus        60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~------d~  131 (283)
T COG2230          60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ------DY  131 (283)
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec------cc
Confidence            444467889999999999999875 7788888998898 99999999998776654    454311100000      01


Q ss_pred             HhhhcCCccEEE-----EecCC---HHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          208 ADMTNGGVDRSV-----ECTGS---VQAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       208 ~~~~~~~~d~Vi-----d~~g~---~~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      ++.. +.||-|+     +.+|.   +..+..+-++|+++ |++.+.......
T Consensus       132 rd~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~  181 (283)
T COG2230         132 RDFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD  181 (283)
T ss_pred             cccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence            1111 2377663     55553   45678888899998 998887765444

>PRK08017 oxidoreductase; Provisional

Probab=96.57  E-value=0.017  Score=49.81  Aligned_cols=76  Identities=22%  Similarity=0.358  Sum_probs=52.8

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHH---HHHhhhcCCccEEEE
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQ---VIADMTNGGVDRSVE  220 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~---~~~~~~~~~~d~Vid  220 (329)
                      +++||+|+ |.+|.++++.+...|+ +|++++++.++.+.+++.+...+. |..+.+ ...+   .+.....+.+|.++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDPE-SVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCHH-HHHHHHHHHHHhcCCCCeEEEE
Confidence            57999987 9999999999998898 889898888888777777754332 332211 1222   222223346888888


Q ss_pred             ecC
Q 047713          221 CTG  223 (329)
Q Consensus       221 ~~g  223 (329)
                      +.|
T Consensus        81 ~ag   83 (256)
T PRK08017         81 NAG   83 (256)
T ss_pred             CCC
Confidence            876

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.51  E-value=0.021  Score=49.32  Aligned_cols=79  Identities=25%  Similarity=0.344  Sum_probs=51.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~V  218 (329)
                      +|++|+|+|+ |.+|.++++.+...|+ +|+.+++++.+.+.. ++++... ..|..+.+ ++.+.+.+...  +++|++
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v   83 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTDED-AVNALFDTAAETYGSVDIA   83 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            4789999987 9999999999988998 788888877665443 4454322 22333221 23333333322  368999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      |.+.|.
T Consensus        84 i~~ag~   89 (255)
T PRK06057         84 FNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            998873

>PRK14967 putative methyltransferase; Provisional

Probab=96.45  E-value=0.18  Score=42.70  Aligned_cols=98  Identities=22%  Similarity=0.184  Sum_probs=62.1

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcC
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  213 (329)
                      ....++++++||-.|+|. |..++.+++. +..++++++.+++..+.+++    .+....+..  .+  +...   ...+
T Consensus        30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~d--~~~~---~~~~  100 (223)
T PRK14967         30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--GD--WARA---VEFR  100 (223)
T ss_pred             HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--Cc--hhhh---ccCC
Confidence            334567889999999986 8888888875 55589999999987776544    333211111  11  2221   1223


Q ss_pred             CccEEEEecCC---------------------------HHHHHHHHHhhccCCeEEEEe
Q 047713          214 GVDRSVECTGS---------------------------VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       214 ~~d~Vid~~g~---------------------------~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      .+|+|+...+.                           ...+..+.+.|+++ |+++.+
T Consensus       101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~  158 (223)
T PRK14967        101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV  158 (223)
T ss_pred             CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence            79999854210                           12345677888998 988765

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.017  Score=52.16  Aligned_cols=78  Identities=24%  Similarity=0.388  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhh--cC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMT--NG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~--~~  213 (329)
                      +++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.    +++.|....   .|..+.+ +..+.+.+..  .+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDAD-QVKALATQAASFGG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHH-HHHHHHHHHHHhcC
Confidence            4689999987 9999999999999999 78888888877653    334454322   2333221 2333332221  24


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|++.|
T Consensus        84 ~iD~lVnnAG   93 (330)
T PRK06139         84 RIDVWVNNVG   93 (330)
T ss_pred             CCCEEEECCC
Confidence            7999999987

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.42  E-value=0.042  Score=43.71  Aligned_cols=94  Identities=24%  Similarity=0.354  Sum_probs=60.2

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      .-.|++++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|... ..       +.+.+     ...|++|.+
T Consensus        20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~~-------~~~a~-----~~adi~vta   85 (162)
T PF00670_consen   20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-MT-------LEEAL-----RDADIFVTA   85 (162)
T ss_dssp             --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E--------HHHHT-----TT-SEEEE-
T ss_pred             eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-cC-------HHHHH-----hhCCEEEEC
Confidence            3468999999999999999999999999 9999999998776665555432 11       22221     247999999


Q ss_pred             cCCHHHH-HHHHHhhccCCeEEEEeccCCC
Q 047713          222 TGSVQAM-ISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       222 ~g~~~~~-~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|..+.+ ..-++.++++ ..+..+|..+.
T Consensus        86 TG~~~vi~~e~~~~mkdg-ail~n~Gh~d~  114 (162)
T PF00670_consen   86 TGNKDVITGEHFRQMKDG-AILANAGHFDV  114 (162)
T ss_dssp             SSSSSSB-HHHHHHS-TT-EEEEESSSSTT
T ss_pred             CCCccccCHHHHHHhcCC-eEEeccCcCce
Confidence            9875543 4667778886 66665665333

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.34  E-value=0.032  Score=45.54  Aligned_cols=88  Identities=27%  Similarity=0.387  Sum_probs=56.5

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      -.|.+|.|+|.|.||+.+++.++.+|. +|++.+++....+.....+....    +    +.+.+.+     .|+|+.+.
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~~----~----l~ell~~-----aDiv~~~~   99 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEYV----S----LDELLAQ-----ADIVSLHL   99 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEES----S----HHHHHHH------SEEEE-S
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccceee----e----hhhhcch-----hhhhhhhh
Confidence            358999999999999999999999999 99999988877664555554211    1    3333333     58887776


Q ss_pred             CCHH----H-HHHHHHhhccCCeEEEEe
Q 047713          223 GSVQ----A-MISAFECVHDGWGVAVLV  245 (329)
Q Consensus       223 g~~~----~-~~~~~~~l~~~~G~vv~~  245 (329)
                      ...+    . -...+..++++ ..++-+
T Consensus       100 plt~~T~~li~~~~l~~mk~g-a~lvN~  126 (178)
T PF02826_consen  100 PLTPETRGLINAEFLAKMKPG-AVLVNV  126 (178)
T ss_dssp             SSSTTTTTSBSHHHHHTSTTT-EEEEES
T ss_pred             ccccccceeeeeeeeeccccc-eEEEec
Confidence            5211    1 13445556665 555444

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.34  E-value=0.026  Score=48.75  Aligned_cols=79  Identities=20%  Similarity=0.343  Sum_probs=51.7

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-e--eeCCCCCCchHHHHHHhhh--c
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVT-E--FVNPKDYDKPVQQVIADMT--N  212 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~-~--~~~~~~~~~~~~~~~~~~~--~  212 (329)
                      ..+++++|+|+ |.+|.+++..+...|+ +|+.+.+++++.+.+.+    .+.. .  ..|..+. +++.+.++++.  .
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   84 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY-QSIKAAVAHAETEA   84 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHhc
Confidence            34789999986 9999999999988999 78888888877544322    1211 1  1222221 22444444332  2


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +.+|++|++.|
T Consensus        85 ~~~d~li~~ag   95 (258)
T PRK06949         85 GTIDILVNNSG   95 (258)
T ss_pred             CCCCEEEECCC
Confidence            37899999987

>PRK00536 speE spermidine synthase; Provisional

Probab=96.32  E-value=0.017  Score=50.01  Aligned_cols=99  Identities=14%  Similarity=0.055  Sum_probs=65.7

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CC-ceeeCCCCCCchHHHHHHhhhcCCccEEE-
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-GV-TEFVNPKDYDKPVQQVIADMTNGGVDRSV-  219 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-g~-~~~~~~~~~~~~~~~~~~~~~~~~~d~Vi-  219 (329)
                      .+.++|||.|+|- |.++-.++|+-.  +|+.++.+++-.+.++++ .. ...++...-.  +...+.+...+.+|+|| 
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~--l~~~~~~~~~~~fDVIIv  145 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFT--HAKQLLDLDIKKYDLIIC  145 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEE--EeehhhhccCCcCCEEEE
Confidence            4468999997754 566778888752  899999999999998883 21 1111111111  11123333334799975 


Q ss_pred             EecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          220 ECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       220 d~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      |+.-.++..+.+.++|+++ |.++.-+.
T Consensus       146 Ds~~~~~fy~~~~~~L~~~-Gi~v~Qs~  172 (262)
T PRK00536        146 LQEPDIHKIDGLKRMLKED-GVFISVAK  172 (262)
T ss_pred             cCCCChHHHHHHHHhcCCC-cEEEECCC
Confidence            6565667788899999998 98887654

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.026  Score=47.95  Aligned_cols=79  Identities=22%  Similarity=0.301  Sum_probs=49.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHh---cCCcee-eCCCCCCchHHHHHHhhhc--CCc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFN-EAKK---FGVTEF-VNPKDYDKPVQQVIADMTN--GGV  215 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~-~~~~---lg~~~~-~~~~~~~~~~~~~~~~~~~--~~~  215 (329)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+++++++.. .+++   .+...+ .|..+. .++.+.+.+...  +++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP-QAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCH-HHHHHHHHHHHHHhCCc
Confidence            3789999987 9999999998888899 7888888665432 2222   222221 222221 123333333322  379


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |+||.+.|.
T Consensus        84 d~vi~~ag~   92 (239)
T PRK12828         84 DALVNIAGA   92 (239)
T ss_pred             CEEEECCcc
Confidence            999998763

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.032  Score=47.24  Aligned_cols=77  Identities=13%  Similarity=0.171  Sum_probs=51.3

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce--eeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE--FVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      ++++|+|+ |.+|.+.+..+...|+ +|+.+++++++.+.+++++...  ..|..+. ++..+.++.+..+++|++|.+.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~id~vi~~a   79 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDP-ASLDQLLQRLQGQRFDLLFVNA   79 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCH-HHHHHHHHHhhcCCCCEEEEcC
Confidence            47899986 9999999998888898 8998888877665555543222  2233222 1233444444334799999887


Q ss_pred             CC
Q 047713          223 GS  224 (329)
Q Consensus       223 g~  224 (329)
                      |.
T Consensus        80 g~   81 (225)
T PRK08177         80 GI   81 (225)
T ss_pred             cc
Confidence            64

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.29  E-value=0.044  Score=48.12  Aligned_cols=98  Identities=29%  Similarity=0.414  Sum_probs=59.4

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcCCccE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~  217 (329)
                      +++|.+||=.|+|+ |.++|..++ +|+++|++++.++-..+.+++    .+.+......     ..........+.+|+
T Consensus       160 ~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~-----~~~~~~~~~~~~~Dv  232 (300)
T COG2264         160 LKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLVQAK-----GFLLLEVPENGPFDV  232 (300)
T ss_pred             hcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhhhcc-----cccchhhcccCcccE
Confidence            56899999988753 666666555 678799999999876655443    3333200000     001112222247999


Q ss_pred             EEEecCCH---HHHHHHHHhhccCCeEEEEecc
Q 047713          218 SVECTGSV---QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       218 Vid~~g~~---~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      |+-..=..   ...+....+++++ |.+++.|.
T Consensus       233 IVANILA~vl~~La~~~~~~lkpg-g~lIlSGI  264 (300)
T COG2264         233 IVANILAEVLVELAPDIKRLLKPG-GRLILSGI  264 (300)
T ss_pred             EEehhhHHHHHHHHHHHHHHcCCC-ceEEEEee
Confidence            98554221   2345566678887 99988875

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.083  Score=45.26  Aligned_cols=101  Identities=19%  Similarity=0.207  Sum_probs=58.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP-SRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~-~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +++++||+|+ |.+|..++..+...|. +|+.+.++. ++.+.    ++..+...   ..|..+. ++..+.+.+...  
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   82 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDE-ESVAALMDTAREEF   82 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHhC
Confidence            3679999987 9999999998888898 777776653 22222    22223221   1233322 123333333322  


Q ss_pred             CCccEEEEecCCH-------------------HHHHHHHHhhccCCeEEEEecc
Q 047713          213 GGVDRSVECTGSV-------------------QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       213 ~~~d~Vid~~g~~-------------------~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +++|+++.+.|..                   ..++.+...+... |+++.++.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS  135 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS  135 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence            2689988877642                   1334444444555 78888764

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.022  Score=50.49  Aligned_cols=79  Identities=24%  Similarity=0.400  Sum_probs=53.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC--cee---eCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV--TEF---VNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~--~~~---~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +|+++||+|+ |++|.++++.+...|+ +|+.+++++++.+. .++++.  ...   .|..+.+ +..+.+.+...  ++
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~   85 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA-AMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence            4789999986 9999999999999999 78888888777654 444542  111   3333321 23333333322  37


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|++.|.
T Consensus        86 id~vI~nAG~   95 (296)
T PRK05872         86 IDVVVANAGI   95 (296)
T ss_pred             CCEEEECCCc
Confidence            9999999984

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.27  E-value=0.063  Score=51.60  Aligned_cols=46  Identities=17%  Similarity=0.127  Sum_probs=38.1

Q ss_pred             hccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 047713          138 NVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE  184 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~  184 (329)
                      ...+.+.|++|||+|+ |.+|..++..+...|. +|+++.++.++.+.
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~  119 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAES  119 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence            3456678999999987 9999999998888898 78888888777654

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.028  Score=48.85  Aligned_cols=78  Identities=18%  Similarity=0.239  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-h---cCCc-ee--eCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-K---FGVT-EF--VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~---lg~~-~~--~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++.++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+. +   .+.. ..  .|..+.+ +..+.+.+...  +
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPE-ATAGLAGQAVEAFG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            4789999987 9999999998888999 8888888876654322 2   2322 11  2333221 23333333322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|+++|
T Consensus        87 ~id~vi~~Ag   96 (263)
T PRK07814         87 RLDIVVNNVG   96 (263)
T ss_pred             CCCEEEECCC
Confidence            7999999887

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.27  E-value=0.028  Score=48.77  Aligned_cols=78  Identities=21%  Similarity=0.280  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-GVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-g~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      ++++++|+|+ |++|.++++.+...|+ +|+.+++++++.+.+++. +...   ..|..+. .+..+.+++...  +.+|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSL-DDHKEAVARCVAAFGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCH-HHHHHHHHHHHHHhCCCC
Confidence            4789999986 9999999998888999 788888877766555442 3211   1232221 123333444332  3689


Q ss_pred             EEEEecC
Q 047713          217 RSVECTG  223 (329)
Q Consensus       217 ~Vid~~g  223 (329)
                      ++|++.|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999886

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.23  E-value=0.044  Score=46.82  Aligned_cols=77  Identities=25%  Similarity=0.441  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      ++.+++|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+.+ ...+.+..  .+++|++|+
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~--~~~~d~vi~   83 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGDDA-AIRAALAA--AGAFDGLVN   83 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCCHH-HHHHHHHH--hCCCCEEEE
Confidence            4689999987 9999999999999998 788888887766544 33444322 2333211 12222222  236899999


Q ss_pred             ecCC
Q 047713          221 CTGS  224 (329)
Q Consensus       221 ~~g~  224 (329)
                      +.|.
T Consensus        84 ~ag~   87 (245)
T PRK07060         84 CAGI   87 (245)
T ss_pred             CCCC
Confidence            8874

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.22  E-value=0.034  Score=48.24  Aligned_cols=79  Identities=23%  Similarity=0.330  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc-ee--eCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVT-EF--VNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~-~~--~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      +++++||+|+ +.+|.++++.+...|+ +|+.+++++++.+.+. +++.. ..  .|..+. .+....+.+...  +.+|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSY-ADNQRAVDQTVDAFGKLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCH-HHHHHHHHHHHHhcCCCC
Confidence            4789999986 9999999998888999 7888888877766543 33321 11  222221 123334443322  3699


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|++.|.
T Consensus        83 ~li~~ag~   90 (263)
T PRK06200         83 CFVGNAGI   90 (263)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.21  E-value=0.041  Score=46.45  Aligned_cols=77  Identities=18%  Similarity=0.288  Sum_probs=51.4

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .+++|+|+ |.+|..+++.+...|+ +|+.+++++++.+.++..+... ..|..+.+ .+.+.+.+...+++|+++.+.|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVADPA-SVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCCHH-HHHHHHHHhcCCCCCEEEECCC
Confidence            46899986 9999999998877898 7888888877776666655432 22333322 2333333333337999998877


Q ss_pred             C
Q 047713          224 S  224 (329)
Q Consensus       224 ~  224 (329)
                      .
T Consensus        80 ~   80 (222)
T PRK06953         80 V   80 (222)
T ss_pred             c
Confidence            4

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.21  E-value=0.013  Score=49.45  Aligned_cols=104  Identities=19%  Similarity=0.237  Sum_probs=65.4

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      +.+...++++++||-.|+|. |..++.+++..+. .+|++++.+++..+.+++    +|.+.+... ..+  ......  
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~-~~d--~~~~~~--  142 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVI-VGD--GTQGWE--  142 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEE-ECC--cccCCc--
Confidence            45566789999999998764 7777778876553 269999999887766543    443221100 111  111000  


Q ss_pred             hcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          211 TNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       211 ~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ..+.||+|+-........+...+.|+++ |+++..-
T Consensus       143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~~  177 (215)
T TIGR00080       143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMPV  177 (215)
T ss_pred             ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEEE
Confidence            1137999875443445566778899998 9987653

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.21  E-value=0.035  Score=48.00  Aligned_cols=80  Identities=19%  Similarity=0.294  Sum_probs=55.0

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC----Cce-ee--CCCCCCchHHHHHHhhhcC
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFG----VTE-FV--NPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg----~~~-~~--~~~~~~~~~~~~~~~~~~~  213 (329)
                      ..+.++||+|+ ++||...+..+...|. +++.+.+++++++.+ +++.    ... ++  |..+.+ +......++...
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~-~~~~l~~~l~~~   81 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPE-ALERLEDELKER   81 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChh-HHHHHHHHHHhc
Confidence            45789999997 9999999999999999 899999999988754 3332    211 22  333322 233333333332


Q ss_pred             --CccEEEEecCC
Q 047713          214 --GVDRSVECTGS  224 (329)
Q Consensus       214 --~~d~Vid~~g~  224 (329)
                        .+|+.++++|.
T Consensus        82 ~~~IdvLVNNAG~   94 (265)
T COG0300          82 GGPIDVLVNNAGF   94 (265)
T ss_pred             CCcccEEEECCCc
Confidence              79999999984

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.21  E-value=0.022  Score=47.04  Aligned_cols=79  Identities=18%  Similarity=0.232  Sum_probs=58.3

Q ss_pred             CCeEEEEc-C-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc-eeeCCCCCC--chHHHHHHhhhcCCccEE
Q 047713          145 GQSVAIFG-L-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVT-EFVNPKDYD--KPVQQVIADMTNGGVDRS  218 (329)
Q Consensus       145 g~~VlI~G-a-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~-~~~~~~~~~--~~~~~~~~~~~~~~~d~V  218 (329)
                      .+.|||+| + |+||.+.+.-....|+ .|+++.++-+..+.+. ++|.. .-+|..+++  ..+..++++...|+.|+.
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            56789996 4 9999999988888999 9999999888877665 67753 233333222  235667777777799999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      ++..|.
T Consensus        86 ~NNAG~   91 (289)
T KOG1209|consen   86 YNNAGQ   91 (289)
T ss_pred             EcCCCC
Confidence            998774

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.04  Score=48.10  Aligned_cols=78  Identities=28%  Similarity=0.367  Sum_probs=51.4

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC-Cce-eeCCCCCCchHHHHHHhhhc--CCccEE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFG-VTE-FVNPKDYDKPVQQVIADMTN--GGVDRS  218 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg-~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~V  218 (329)
                      +.++||+|+ |++|..++..+...|+ +|+.+++++++.+.+ ++++ ... ..|..+.+ ++.+.+.+...  +++|++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPA-SFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            678999987 9999999998888899 788888887776543 4444 221 22333321 23333333322  479999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      |++.|.
T Consensus        83 i~~ag~   88 (273)
T PRK07825         83 VNNAGV   88 (273)
T ss_pred             EECCCc
Confidence            999873

>PLN02476 O-methyltransferase

Probab=96.17  E-value=0.038  Score=48.25  Aligned_cols=103  Identities=17%  Similarity=0.156  Sum_probs=67.2

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhh-
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMT-  211 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~-  211 (329)
                      ...+..+.++||-+|.+ +|..++.+|+.++ -.++++++.+++..+.++    +.|...-+.....+  ..+.+.++. 
T Consensus       112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~Gd--A~e~L~~l~~  188 (278)
T PLN02476        112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGL--AAESLKSMIQ  188 (278)
T ss_pred             HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHh
Confidence            34556678899999864 4777778887664 227999999998877764    45654333332333  444454432 


Q ss_pred             ---cCCccEEEEecCC---HHHHHHHHHhhccCCeEEEE
Q 047713          212 ---NGGVDRSVECTGS---VQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       212 ---~~~~d~Vid~~g~---~~~~~~~~~~l~~~~G~vv~  244 (329)
                         .+.||.||--...   ...++.++++|+++ |.++.
T Consensus       189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~  226 (278)
T PLN02476        189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVM  226 (278)
T ss_pred             cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEE
Confidence               2379998744333   34578889999997 87664

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.16  E-value=0.042  Score=52.43  Aligned_cols=74  Identities=24%  Similarity=0.245  Sum_probs=53.6

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      .+.+|++|+|.|.|.+|++++.+++..|+ .|++.+..+.+.+.++++|+... ....    ....+     ..+|+|+.
T Consensus         8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~~----~~~~l-----~~~D~VV~   76 (488)
T PRK03369          8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STSD----AVQQI-----ADYALVVT   76 (488)
T ss_pred             cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCcc----hHhHh-----hcCCEEEE
Confidence            35578999999999999999999999998 88889877666666777777432 2111    11112     13789998


Q ss_pred             ecCCH
Q 047713          221 CTGSV  225 (329)
Q Consensus       221 ~~g~~  225 (329)
                      +.|.+
T Consensus        77 SpGi~   81 (488)
T PRK03369         77 SPGFR   81 (488)
T ss_pred             CCCCC
Confidence            88854

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.082  Score=47.83  Aligned_cols=79  Identities=22%  Similarity=0.244  Sum_probs=51.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCcee---eCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTEF---VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++.+++|+|+ |++|.++++.+...|+ +|+.+++++++.+.+    ++.|....   .|..+.+ +..+.+.+...  +
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~-~v~~~~~~~~~~~g   84 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE-AVQAAADRAEEELG   84 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH-HHHHHHHHHHHHCC
Confidence            4678999986 9999999999888998 788888887765432    33454322   2333221 23333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        85 ~iD~lInnAg~   95 (334)
T PRK07109         85 PIDTWVNNAMV   95 (334)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>PRK00811 spermidine synthase; Provisional

Probab=96.16  E-value=0.041  Score=48.53  Aligned_cols=99  Identities=17%  Similarity=0.172  Sum_probs=63.6

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--------ceeeCCCCCCchHHHHHHhhhcCC
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV--------TEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      .+.++||++|+|. |..+..+++..+.++|++++.+++-.+.+++.=.        +.-+.....+  ..+.++. ..+.
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~D--a~~~l~~-~~~~  150 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGD--GIKFVAE-TENS  150 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECc--hHHHHhh-CCCc
Confidence            3467999998764 7777777887677799999999998888876311        1001011111  3344443 3347


Q ss_pred             ccEEEEec----C------CHHHHHHHHHhhccCCeEEEEec
Q 047713          215 VDRSVECT----G------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       215 ~d~Vid~~----g------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|+||--.    +      ..+.++.+.+.|+++ |.++...
T Consensus       151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~  191 (283)
T PRK00811        151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS  191 (283)
T ss_pred             ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence            99987432    1      123467788899998 9888653

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.033  Score=47.97  Aligned_cols=79  Identities=23%  Similarity=0.279  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce----eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE----FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~----~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      ++.++||+|+ |.+|..+++.+...|+ +|+.++++++..+...++....    ..|..+. .++.+.+.+...  +++|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~~d   91 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDS-QSVEAAVAAVISAFGRID   91 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCCC
Confidence            4789999987 9999999998888998 7888888776555554443211    1232221 123333333322  3689


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|.+.|.
T Consensus        92 ~vi~~ag~   99 (255)
T PRK06841         92 ILVNSAGV   99 (255)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.13  E-value=0.12  Score=42.82  Aligned_cols=106  Identities=16%  Similarity=0.279  Sum_probs=62.8

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.....++++++||=.|+|. |..++.+++.....+|++++.+++..+.+++    ++...+... ..+  ..+.+..+.
T Consensus        32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~-~~d--~~~~~~~~~  107 (196)
T PRK07402         32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVI-EGS--APECLAQLA  107 (196)
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEE-ECc--hHHHHhhCC
Confidence            44556778899988887643 5556666665433389999999988776653    454321111 111  222222221


Q ss_pred             cCCccE-EEEecCC-HHHHHHHHHhhccCCeEEEEecc
Q 047713          212 NGGVDR-SVECTGS-VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~~~~d~-Vid~~g~-~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                       ..+|. +++.... ...++.+.+.|+++ |+++....
T Consensus       108 -~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  143 (196)
T PRK07402        108 -PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS  143 (196)
T ss_pred             -CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence             22344 4443222 36678888899998 99887753

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.04  Score=47.80  Aligned_cols=81  Identities=25%  Similarity=0.348  Sum_probs=51.8

Q ss_pred             CCCCCeEEEEcC-C-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----h-cCCcee----eCCCCCCchHHHHHHhh
Q 047713          142 PKKGQSVAIFGL-G-AVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----K-FGVTEF----VNPKDYDKPVQQVIADM  210 (329)
Q Consensus       142 ~~~g~~VlI~Ga-g-~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~-lg~~~~----~~~~~~~~~~~~~~~~~  210 (329)
                      +.+++++||+|+ | ++|.++++.+...|+ +|+.+++++++.+...    + ++...+    .|..+. ++..+.+.+.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~   91 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSE-AQVDALIDAA   91 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCH-HHHHHHHHHH
Confidence            345789999986 6 799999999999999 7888887776554332    2 343222    233222 1233333332


Q ss_pred             h--cCCccEEEEecCC
Q 047713          211 T--NGGVDRSVECTGS  224 (329)
Q Consensus       211 ~--~~~~d~Vid~~g~  224 (329)
                      .  .+++|++|++.|.
T Consensus        92 ~~~~g~id~li~~ag~  107 (262)
T PRK07831         92 VERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            2  1479999999984

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.10  E-value=0.042  Score=47.41  Aligned_cols=79  Identities=24%  Similarity=0.235  Sum_probs=48.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~V  218 (329)
                      .+.+++|+|+ |.+|.++++.+...|+ +|+.+.. +++..+.+++.+... ..|..+. ++..+.+.+...  +++|++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id~l   83 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGNR-DQVKKSKEVVEKEFGRVDVL   83 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            3689999986 9999999998888898 6665543 444444444433322 2233322 123344444322  369999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      |.+.|.
T Consensus        84 i~~ag~   89 (255)
T PRK06463         84 VNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            998874

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.08  E-value=0.035  Score=48.05  Aligned_cols=81  Identities=25%  Similarity=0.341  Sum_probs=52.0

Q ss_pred             CCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCc----eeeCCCCCCchHHHHHHhhhc--C
Q 047713          142 PKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVT----EFVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       142 ~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~----~~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .-++.++||+|+ |.+|..++..+...|+ +|+.+.++++..+.+.+ +.-.    ...|..+.. .+...+.+...  +
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   85 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPA-QVERVFDTAVERFG   85 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence            346789999987 9999999999988999 78888887766554433 2211    122332221 22233333221  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+||.+.|.
T Consensus        86 ~~d~vi~~ag~   96 (264)
T PRK12829         86 GLDVLVNNAGI   96 (264)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.07  E-value=0.032  Score=51.84  Aligned_cols=76  Identities=11%  Similarity=0.112  Sum_probs=53.5

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      -.+.+|+|.|+|.+|.+++..+...|++.++.+.++.++.+ ++++++...++.       + +.+.+.. ..+|+||+|
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~-~~l~~~l-~~aDiVI~a  249 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------L-SELPQLI-KKADIIIAA  249 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------H-HHHHHHh-ccCCEEEEC
Confidence            45789999999999999999999999878888888877654 455565222221       2 1222221 248999999


Q ss_pred             cCCHHH
Q 047713          222 TGSVQA  227 (329)
Q Consensus       222 ~g~~~~  227 (329)
                      ++++..
T Consensus       250 T~a~~~  255 (414)
T PRK13940        250 VNVLEY  255 (414)
T ss_pred             cCCCCe
Confidence            987654

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.06  E-value=0.044  Score=48.04  Aligned_cols=78  Identities=23%  Similarity=0.371  Sum_probs=51.6

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce----eeCCCCCCchHHHHHHhhhc--CCccE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE----FVNPKDYDKPVQQVIADMTN--GGVDR  217 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~----~~~~~~~~~~~~~~~~~~~~--~~~d~  217 (329)
                      +.++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+.+.....    ..|..+.+ ...+.+++...  +++|+
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFD-AIDAVVADAEATFGPIDV   81 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHH-HHHHHHHHHHHHhCCCCE
Confidence            578999986 9999999998888898 7989988887766554432211    12332221 23333333322  36899


Q ss_pred             EEEecCC
Q 047713          218 SVECTGS  224 (329)
Q Consensus       218 Vid~~g~  224 (329)
                      ++++.|.
T Consensus        82 vv~~ag~   88 (277)
T PRK06180         82 LVNNAGY   88 (277)
T ss_pred             EEECCCc
Confidence            9999875

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.041  Score=47.44  Aligned_cols=79  Identities=19%  Similarity=0.255  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK---FGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+.++.++.+.+ ++   .+...   ..|..+. ++..+.+.+...  +
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   85 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQH-QQVTSMLDQVTAELG   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence            4789999987 9999999999988999 788888877665433 22   23211   1233222 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+++++.|.
T Consensus        86 ~id~lv~~ag~   96 (253)
T PRK05867         86 GIDIAVCNAGI   96 (253)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.052  Score=47.22  Aligned_cols=79  Identities=18%  Similarity=0.242  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc----CCc---eeeCCCCCCchHHHHHHhhh-cC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF----GVT---EFVNPKDYDKPVQQVIADMT-NG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l----g~~---~~~~~~~~~~~~~~~~~~~~-~~  213 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. ++    +..   ...|..+. ++....+.+.. .+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~g   84 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKR-EDLERTVKELKNIG   84 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCH-HHHHHHHHHHHhhC
Confidence            4789999986 9999999999999999 7888888877654432 22    221   12233332 12333333332 24


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+++++.|.
T Consensus        85 ~iD~lv~nag~   95 (263)
T PRK08339         85 EPDIFFFSTGG   95 (263)
T ss_pred             CCcEEEECCCC
Confidence            79999998874

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.03  E-value=0.055  Score=48.66  Aligned_cols=80  Identities=18%  Similarity=0.189  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCc----eeeCCCCCCchHHHHHHhhhcC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF----GVT----EFVNPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l----g~~----~~~~~~~~~~~~~~~~~~~~~~  213 (329)
                      .|++++|+|+ +++|.+.+..+...|+ +|+.+++++++.+.+ +++    +..    ..+|..+...+..+.+.+..++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            5899999987 9999999998888899 788888888876543 222    111    1223332111234445554444


Q ss_pred             -CccEEEEecCC
Q 047713          214 -GVDRSVECTGS  224 (329)
Q Consensus       214 -~~d~Vid~~g~  224 (329)
                       .+|++++++|.
T Consensus       131 ~didilVnnAG~  142 (320)
T PLN02780        131 LDVGVLINNVGV  142 (320)
T ss_pred             CCccEEEEecCc
Confidence             67799998873

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.00  E-value=0.12  Score=44.14  Aligned_cols=79  Identities=24%  Similarity=0.252  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++.+++|+|+ |.+|..++..+...|+ +|+.+++++++.+..    ++.+...   ..|..+.+ +..+.+.+...  +
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   83 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPA-SVQRFFDAAAAALG   83 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            4789999987 9999999999888998 788887777654432    2223221   12332211 22233332222  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|.++|.
T Consensus        84 ~id~vi~~ag~   94 (250)
T PRK12939         84 GLDGLVNNAGI   94 (250)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.99  E-value=0.041  Score=45.74  Aligned_cols=99  Identities=18%  Similarity=0.266  Sum_probs=61.4

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhh-
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMT-  211 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~-  211 (329)
                      .+.....++.+||-.|+|. |..++.+|+. |. +|++++.+++..+.+++.    +...+ .....+  +    .+.. 
T Consensus        23 ~~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d--~----~~~~~   92 (197)
T PRK11207         23 LEAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAVVD--L----NNLTF   92 (197)
T ss_pred             HHhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecC--h----hhCCc
Confidence            3344556678999998864 7778888875 76 899999999877766543    22111 110011  1    1111 


Q ss_pred             cCCccEEEEecC----C----HHHHHHHHHhhccCCeEEEEec
Q 047713          212 NGGVDRSVECTG----S----VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       212 ~~~~d~Vid~~g----~----~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .+.+|+|+....    .    ...+....+.|+++ |.++.+.
T Consensus        93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~  134 (197)
T PRK11207         93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA  134 (197)
T ss_pred             CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence            236999986532    1    24466777789998 9865543

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.99  E-value=0.059  Score=46.20  Aligned_cols=79  Identities=19%  Similarity=0.329  Sum_probs=50.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCce---eeCCCCCCchHHHHHHhhhc--CCc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS--RFNEAKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGV  215 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~--~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~  215 (329)
                      .|+++||+|+ |.+|.+++..+...|+ .|+.+++++.  ..+.+++++...   ..|..+. +++...+++...  +++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDI-EAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHcCCC
Confidence            4789999987 9999999998888999 7888877542  223344444321   1233222 224444443322  369


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |+++++.|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=95.97  E-value=0.084  Score=44.99  Aligned_cols=106  Identities=20%  Similarity=0.279  Sum_probs=74.1

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHh--
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIAD--  209 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~--  209 (329)
                      +.....+.+|++||=.|+| +|-.++.+++..|...|++++.++..++.+++-    +... +..-..+      ..+  
T Consensus        43 ~i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~d------Ae~LP  114 (238)
T COG2226          43 LISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGD------AENLP  114 (238)
T ss_pred             HHHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEec------hhhCC
Confidence            4455566689999988765 599999999998866999999999988876652    2221 1111111      111  


Q ss_pred             hhcCCccEEEEecCC------HHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          210 MTNGGVDRSVECTGS------VQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       210 ~~~~~~d~Vid~~g~------~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      ..+..||+|.-+.|-      +..+....+.|+|+ |+++.+.....
T Consensus       115 f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p  160 (238)
T COG2226         115 FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP  160 (238)
T ss_pred             CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence            222379999877763      45688889999998 99998876544

>PLN02366 spermidine synthase

Probab=95.97  E-value=0.1  Score=46.47  Aligned_cols=102  Identities=18%  Similarity=0.134  Sum_probs=64.7

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCc-eeeCCCCC---CchHHHHHHhhhcCCccE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-GVT-EFVNPKDY---DKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-g~~-~~~~~~~~---~~~~~~~~~~~~~~~~d~  217 (329)
                      .+.++||+.|+|. |..+..++++-+..+|++++.+++-.+.++++ ... ..++...-   ..+....+++...+.+|+
T Consensus        90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv  168 (308)
T PLN02366         90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA  168 (308)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence            4578999998765 66677888877666899999999888887773 210 00100000   012434444433447999


Q ss_pred             EEEecCC----------HHHHHHHHHhhccCCeEEEEec
Q 047713          218 SVECTGS----------VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       218 Vid~~g~----------~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ||--...          .+.++.+.++|+++ |.++.-.
T Consensus       169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~  206 (308)
T PLN02366        169 IIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA  206 (308)
T ss_pred             EEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence            8742211          24577888999998 9987654

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=95.97  E-value=0.036  Score=45.58  Aligned_cols=97  Identities=14%  Similarity=0.133  Sum_probs=61.0

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcCCccE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~  217 (329)
                      ++++.+||-.|+|. |..++.+++.....+|++++.+++..+.+++    .+.+. +.....+  ..+ +. . .+.+|+
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~d--~~~-~~-~-~~~fDl  115 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHGR--AEE-FG-Q-EEKFDV  115 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEecc--Hhh-CC-C-CCCccE
Confidence            44588999888753 6666666665543499999999887766543    44432 1111111  211 11 1 237999


Q ss_pred             EEEec-C-CHHHHHHHHHhhccCCeEEEEec
Q 047713          218 SVECT-G-SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       218 Vid~~-g-~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+-.. + ....+..+.+.|+++ |+++.+-
T Consensus       116 V~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~  145 (187)
T PRK00107        116 VTSRAVASLSDLVELCLPLLKPG-GRFLALK  145 (187)
T ss_pred             EEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            98532 1 235677888999998 9988774

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=95.96  E-value=0.02  Score=49.10  Aligned_cols=108  Identities=18%  Similarity=0.197  Sum_probs=65.4

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHH-HHHh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQ-VIAD  209 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~-~~~~  209 (329)
                      +...+++.||++|+-.|.|. |.++..+++..| ..+|++.+.++++.+.++    .+|....+.....+  ..+ ...+
T Consensus        32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D--v~~~g~~~  108 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD--VCEEGFDE  108 (247)
T ss_dssp             HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GGCG--ST
T ss_pred             HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc--eecccccc
Confidence            55678999999999987653 677777887665 338999999998887664    35553222111111  110 1111


Q ss_pred             hhcCCccEEEEecC-CHHHHHHHHHhh-ccCCeEEEEecc
Q 047713          210 MTNGGVDRSVECTG-SVQAMISAFECV-HDGWGVAVLVGV  247 (329)
Q Consensus       210 ~~~~~~d~Vid~~g-~~~~~~~~~~~l-~~~~G~vv~~g~  247 (329)
                      -....+|.||--.. ....++.+.+.| +++ |+++.+..
T Consensus       109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP  147 (247)
T PF08704_consen  109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP  147 (247)
T ss_dssp             T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred             cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence            11236898764443 445789999999 887 99999865

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.92  E-value=0.047  Score=47.13  Aligned_cols=79  Identities=18%  Similarity=0.167  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK---FGVTE---FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      ++.++||+|+ |.+|..++..+...|+ +|+.+++++++.+..++   .+...   ..|..+. ++..+.+.+...  ++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDD-AQCRDAVEQTVAKFGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhcCC
Confidence            3679999987 9999999998888898 67777777766544333   23221   1222221 123333333322  37


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|.+.|.
T Consensus        84 id~vi~~ag~   93 (258)
T PRK08628         84 IDGLVNNAGV   93 (258)
T ss_pred             CCEEEECCcc
Confidence            9999999873

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=95.89  E-value=0.079  Score=45.31  Aligned_cols=103  Identities=16%  Similarity=0.175  Sum_probs=66.2

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh-
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT-  211 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~-  211 (329)
                      ...+..++++||-.|.| +|..++.+++.++ ..+|++++.+++..+.+++    .|....+.....+  ..+.+.++. 
T Consensus        62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gd--a~~~L~~l~~  138 (234)
T PLN02781         62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSD--ALSALDQLLN  138 (234)
T ss_pred             HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcc--HHHHHHHHHh
Confidence            34556678899998874 4777777777653 3499999999988777654    4543222222222  444444442 


Q ss_pred             ---cCCccEEEEecC---CHHHHHHHHHhhccCCeEEEE
Q 047713          212 ---NGGVDRSVECTG---SVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       212 ---~~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~  244 (329)
                         .+.||+||--..   ....++.++++++++ |.++.
T Consensus       139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~  176 (234)
T PLN02781        139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAF  176 (234)
T ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEE
Confidence               237999974432   245677888999997 87664

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.85  E-value=0.093  Score=43.80  Aligned_cols=34  Identities=32%  Similarity=0.359  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      ..+|+|.|+|++|..+++.+...|..++..++.+
T Consensus        21 ~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        21 NSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            5789999999999999999999999889888876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.84  E-value=0.043  Score=47.04  Aligned_cols=79  Identities=22%  Similarity=0.271  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC--Cc---eeeCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFG--VT---EFVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg--~~---~~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      .+.++||+|+ |.+|..+++.+...|. +|+.+++++++.+.+ ..+.  ..   ...|..+. .++.+.+.+...  +.
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDE-ADVEAAVAAALERFGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhCC
Confidence            3678999987 9999999998888899 788888887765443 3332  11   11222221 123333333321  36


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|+||.+.|.
T Consensus        82 ~d~vi~~ag~   91 (251)
T PRK07231         82 VDILVNNAGT   91 (251)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.062  Score=46.28  Aligned_cols=73  Identities=16%  Similarity=0.135  Sum_probs=48.1

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce---eeCCCCCCchHHHHHHhhhcCCcc
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTE---FVNPKDYDKPVQQVIADMTNGGVD  216 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~---~~~~~~~~~~~~~~~~~~~~~~~d  216 (329)
                      +.++||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+++    .+...   ..|..+.     ..+.....+++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-----IDRAQAAEWDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-----HHHHHHhcCCCC
Confidence            468999987 9999999999999998 78888877765544332    23221   1232221     123333334799


Q ss_pred             EEEEecC
Q 047713          217 RSVECTG  223 (329)
Q Consensus       217 ~Vid~~g  223 (329)
                      ++|++.|
T Consensus        76 ~vi~~ag   82 (257)
T PRK09291         76 VLLNNAG   82 (257)
T ss_pred             EEEECCC
Confidence            9999887

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.072  Score=47.20  Aligned_cols=79  Identities=25%  Similarity=0.400  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce-e--eCCCCCCchHHHHHHhhh--cC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTE-F--VNPKDYDKPVQQVIADMT--NG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~-~--~~~~~~~~~~~~~~~~~~--~~  213 (329)
                      .+.+++|+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.    +.+... .  .|..+. +++.+.+++..  .+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~g  116 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDL-DAVDALVADVEKRIG  116 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            3578999986 9999999998888898 8888888877654432    223221 1  232222 12333333322  23


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      .+|++|++.|.
T Consensus       117 ~id~li~~AG~  127 (293)
T PRK05866        117 GVDILINNAGR  127 (293)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.78  E-value=0.12  Score=43.00  Aligned_cols=81  Identities=28%  Similarity=0.373  Sum_probs=53.8

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      -.|.+++|+|.|.+|..+++.+...|+ +|++++.++++.+.+. .+++.. ++..+           +.....|+++-+
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~-v~~~~-----------l~~~~~Dv~vp~   92 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATV-VAPEE-----------IYSVDADVFAPC   92 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEE-Ecchh-----------hccccCCEEEec
Confidence            357899999999999999999999999 8889998888766654 446432 22211           111147888866


Q ss_pred             cCCHHHHHHHHHhhc
Q 047713          222 TGSVQAMISAFECVH  236 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~  236 (329)
                      ......-...++.++
T Consensus        93 A~~~~I~~~~~~~l~  107 (200)
T cd01075          93 ALGGVINDDTIPQLK  107 (200)
T ss_pred             ccccccCHHHHHHcC
Confidence            543323334445554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.77  E-value=0.056  Score=46.92  Aligned_cols=79  Identities=24%  Similarity=0.300  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc----CCce----eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF----GVTE----FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l----g~~~----~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .|+++||+|+ +.+|.++++.+...|+ +|+.+++++++.+.+. ++    +...    ..|..+.+ +..+.+.+... 
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEA-DVAAFAAAVEAR   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHH-HHHHHHHHHHHh
Confidence            4789999987 9999999999988999 7888888876654322 11    1111    12333321 23333333322 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +.+|++++++|.
T Consensus        85 ~g~id~li~~Ag~   97 (265)
T PRK07062         85 FGGVDMLVNNAGQ   97 (265)
T ss_pred             cCCCCEEEECCCC
Confidence             369999999873

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.77  E-value=0.072  Score=45.69  Aligned_cols=79  Identities=25%  Similarity=0.360  Sum_probs=49.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCc---eeeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF---GVT---EFVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l---g~~---~~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .+.++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ +++   +..   ...|..+.. +..+.+.+...  +
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPD-SAKAMADATVSAFG   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence            4678999987 9999999998888898 788888876554332 222   211   122332221 22222222221  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+||.+.|.
T Consensus        83 ~id~vi~~ag~   93 (250)
T PRK07774         83 GIDYLVNNAAI   93 (250)
T ss_pred             CCCEEEECCCC
Confidence            69999998873

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.76  E-value=0.083  Score=45.80  Aligned_cols=79  Identities=23%  Similarity=0.367  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc--CCc-ee--eCCCCCCchHHHHHHhhh-cCCc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF--GVT-EF--VNPKDYDKPVQQVIADMT-NGGV  215 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l--g~~-~~--~~~~~~~~~~~~~~~~~~-~~~~  215 (329)
                      ++.++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+. ++  +.. ..  .|..+.+ ...+...... .+.+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~i   81 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEA-GREAVLARAREMGGI   81 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHhcCCC
Confidence            4678999986 9999999998888998 7888888877665443 22  111 11  2222211 1222222221 2478


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |+++.+.|.
T Consensus        82 d~lv~~ag~   90 (263)
T PRK09072         82 NVLINNAGV   90 (263)
T ss_pred             CEEEECCCC
Confidence            999998874

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.74  E-value=0.35  Score=40.39  Aligned_cols=93  Identities=18%  Similarity=0.211  Sum_probs=57.1

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS-RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~-~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      .|.+|||.|+|.+|...+..+...|+ +|++++.... ....+.+.|--..+ ..++.  . ..   +  .++++||-+.
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~-~~~~~--~-~d---l--~~~~lVi~at   77 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWL-ARCFD--A-DI---L--EGAFLVIAAT   77 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEE-eCCCC--H-HH---h--CCcEEEEECC
Confidence            37899999999999999999999999 7888765432 22223333311111 12211  0 11   1  3689999999


Q ss_pred             CCHHHHHHHHHhhccCCeEEEEecc
Q 047713          223 GSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       223 g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +.++.-.......+.. |..+....
T Consensus        78 ~d~~ln~~i~~~a~~~-~ilvn~~d  101 (205)
T TIGR01470        78 DDEELNRRVAHAARAR-GVPVNVVD  101 (205)
T ss_pred             CCHHHHHHHHHHHHHc-CCEEEECC
Confidence            8754444555555555 76665543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.73  E-value=0.053  Score=47.77  Aligned_cols=75  Identities=13%  Similarity=0.091  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce-eeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE-FVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      ++.+++|+|+|+.+.+++.-+...|++++..+.++.+|.+. +++++... +....     ..+.+.+.. ..+|+||+|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~~~~~~~~-~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GDSGGLAIE-KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----chhhhhhcc-cCCCEEEEC
Confidence            57899999999999999999999998889999888877654 44443211 11110     001111111 258999999


Q ss_pred             cCC
Q 047713          222 TGS  224 (329)
Q Consensus       222 ~g~  224 (329)
                      +..
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            864

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.72  E-value=0.076  Score=45.46  Aligned_cols=79  Identities=19%  Similarity=0.348  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCcee---eCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTEF---VNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      ++.+++|+|+ |.+|.++++.+...|+ +|+.+++++++.+. .++++....   .|..+.. +....+.....  +++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVA-AQKALAQALAEAFGRLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence            4679999987 9999999999998999 78888887765543 344554321   2222211 12222222222  3689


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|.+.|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK06196 oxidoreductase; Provisional

Probab=95.72  E-value=0.085  Score=47.22  Aligned_cols=79  Identities=19%  Similarity=0.301  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC-Cce-eeCCCCCCchHHHHHHhhhc--CCccE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFG-VTE-FVNPKDYDKPVQQVIADMTN--GGVDR  217 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg-~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~  217 (329)
                      .+.++||+|+ |.+|.+++..+...|+ +|+.+.++.++.+.+ +++. ... ..|..+. .+..+.+.+...  +++|+
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~-~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADL-ESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCH-HHHHHHHHHHHhcCCCCCE
Confidence            4689999987 9999999998888898 788888877665432 3332 111 1233222 123333433332  37999


Q ss_pred             EEEecCC
Q 047713          218 SVECTGS  224 (329)
Q Consensus       218 Vid~~g~  224 (329)
                      +|++.|.
T Consensus       103 li~nAg~  109 (315)
T PRK06196        103 LINNAGV  109 (315)
T ss_pred             EEECCCC
Confidence            9998873

>PRK08265 short chain dehydrogenase; Provisional

Probab=95.71  E-value=0.075  Score=46.11  Aligned_cols=79  Identities=23%  Similarity=0.307  Sum_probs=52.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      +++++||+|+ |.+|.+++..+...|+ +|+.++++.++.+. .++++...   ..|..+. ++..+.+.+...  +.+|
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g~id   82 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDD-AAIERAVATVVARFGRVD   82 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCH-HHHHHHHHHHHHHhCCCC
Confidence            4689999986 9999999999888999 88888888765543 44454321   1233322 123333333322  3689


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|++.|.
T Consensus        83 ~lv~~ag~   90 (261)
T PRK08265         83 ILVNLACT   90 (261)
T ss_pred             EEEECCCC
Confidence            99998873

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.71  E-value=0.067  Score=50.81  Aligned_cols=78  Identities=23%  Similarity=0.343  Sum_probs=54.2

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh---------------------hhHHHHHhcCCceeeCCCCCCch
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP---------------------SRFNEAKKFGVTEFVNPKDYDKP  202 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~---------------------~~~~~~~~lg~~~~~~~~~~~~~  202 (329)
                      .+++|+|+|+|+.|+.++..++..|. .|+.++..+                     ...++++++|.+...+..-.. +
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~-~  217 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR-D  217 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC-c
Confidence            68899999999999999999999999 677776543                     245677888886655432211 0


Q ss_pred             HHHHHHhhhcCCccEEEEecCCHH
Q 047713          203 VQQVIADMTNGGVDRSVECTGSVQ  226 (329)
Q Consensus       203 ~~~~~~~~~~~~~d~Vid~~g~~~  226 (329)
                      .  .+.++. .++|.||.++|...
T Consensus       218 ~--~~~~~~-~~~D~vilAtGa~~  238 (467)
T TIGR01318       218 I--SLDDLL-EDYDAVFLGVGTYR  238 (467)
T ss_pred             c--CHHHHH-hcCCEEEEEeCCCC
Confidence            0  111111 25999999999743

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.71  E-value=0.075  Score=45.77  Aligned_cols=79  Identities=20%  Similarity=0.290  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCcee---eCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTEF---VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +++++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+....   .|..+. +...+.+++...  +
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   82 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDE-AYAKALVALAVERFG   82 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHhcC
Confidence            3679999986 9999999998888999 788888877765433    22332221   232221 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      .+|++|.++|.
T Consensus        83 ~id~li~~ag~   93 (254)
T PRK07478         83 GLDIAFNNAGT   93 (254)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.71  E-value=0.083  Score=45.66  Aligned_cols=78  Identities=19%  Similarity=0.166  Sum_probs=49.8

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC----c-eeeCCCCCCchHHHHHHhhhc--CCc
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGV----T-EFVNPKDYDKPVQQVIADMTN--GGV  215 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~----~-~~~~~~~~~~~~~~~~~~~~~--~~~  215 (329)
                      +.++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.. +++..    . ...|..+. +++.+.+.+...  +.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDA-DALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCH-HHHHHHHHHHHHhCCCC
Confidence            468999986 9999999998888899 788888887766543 32321    1 11233221 224444443322  258


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |+++++.|.
T Consensus        80 d~lv~~ag~   88 (257)
T PRK07024         80 DVVIANAGI   88 (257)
T ss_pred             CEEEECCCc
Confidence            999998873

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.70  E-value=0.077  Score=45.48  Aligned_cols=78  Identities=27%  Similarity=0.387  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +++++||+|+ |.+|+.+++.+...|+ +|+.+++++++.+..    +..+...   ..|..+. ....+.+.....  +
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDE-EDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            4789999987 9999999999988898 788888877654432    3334321   2222221 123333343322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|.||.+.|
T Consensus        82 ~id~vi~~ag   91 (253)
T PRK08217         82 QLNGLINNAG   91 (253)
T ss_pred             CCCEEEECCC
Confidence            6899999887

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.076  Score=45.76  Aligned_cols=79  Identities=23%  Similarity=0.268  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc---CCc---eeeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF---GVT---EFVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l---g~~---~~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++.++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+. ++   +..   ...|..+. +++...+.+...  +
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDE-DQCANLVALALERFG   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCH-HHHHHHHHHHHHHcC
Confidence            4689999986 9999999999889999 7888888776554332 22   221   12233221 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      .+|++|.+.|.
T Consensus        82 ~~d~vi~~ag~   92 (258)
T PRK07890         82 RVDALVNNAFR   92 (258)
T ss_pred             CccEEEECCcc
Confidence            68999998874

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.70  E-value=0.077  Score=39.02  Aligned_cols=87  Identities=18%  Similarity=0.234  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .|.+|||.|+|.+|..-++.+...|+ +|.+++...   +..+  +.-... .++    +    ++. -.++++||-+.+
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~~~----~----~~~-l~~~~lV~~at~   69 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-RRE----F----EED-LDGADLVFAATD   69 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-ESS---------GGG-CTTESEEEE-SS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-hhh----H----HHH-HhhheEEEecCC
Confidence            47899999999999999999999998 888887764   2222  111111 111    2    110 126899999997


Q ss_pred             CHHHHHHHHHhhccCCeEEEEecc
Q 047713          224 SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       224 ~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+..-+...+..+.. |.++....
T Consensus        70 d~~~n~~i~~~a~~~-~i~vn~~D   92 (103)
T PF13241_consen   70 DPELNEAIYADARAR-GILVNVVD   92 (103)
T ss_dssp             -HHHHHHHHHHHHHT-TSEEEETT
T ss_pred             CHHHHHHHHHHHhhC-CEEEEECC
Confidence            765555555556655 88877765

>PRK08589 short chain dehydrogenase; Validated

Probab=95.69  E-value=0.07  Score=46.64  Aligned_cols=79  Identities=23%  Similarity=0.326  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc---CCc---eeeCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF---GVT---EFVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l---g~~---~~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +++++||+|+ +++|.+++..+...|+ +|+.++++++..+.++++   +..   ...|..+.+ +....+.+...  ++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQ-QVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHHHcCC
Confidence            4789999986 9999999998888899 788887774333333332   321   122333221 23333333322  36


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|++.|.
T Consensus        83 id~li~~Ag~   92 (272)
T PRK08589         83 VDVLFNNAGV   92 (272)
T ss_pred             cCEEEECCCC
Confidence            8999998873

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.69  E-value=0.08  Score=45.69  Aligned_cols=79  Identities=16%  Similarity=0.268  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce----eeCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE----FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~----~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      .|++++|+|+   +++|.++++.+...|+ +|+.+.++++..+.++++....    ..|..+. ++..+.+.+...  +.
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASD-ESIERAFATIKERVGK   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCH-HHHHHHHHHHHHHhCC
Confidence            4789999986   4899999998888999 7888777654444444442211    1233222 123333333322  46


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|+++++.|.
T Consensus        84 iD~lv~nAg~   93 (252)
T PRK06079         84 IDGIVHAIAY   93 (252)
T ss_pred             CCEEEEcccc
Confidence            9999998873

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.68  E-value=0.1  Score=45.16  Aligned_cols=81  Identities=25%  Similarity=0.286  Sum_probs=49.2

Q ss_pred             CCCCCeEEEEcC-CHHHHHHHHHHHHc-CCCEEEEEcCChhh-HH----HHHhcCC-c-e--eeCCCCCCchHHHHHHhh
Q 047713          142 PKKGQSVAIFGL-GAVGLAAAEGARVS-GASRIIGVDLNPSR-FN----EAKKFGV-T-E--FVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       142 ~~~g~~VlI~Ga-g~iG~aai~la~~~-G~~~vv~~~~~~~~-~~----~~~~lg~-~-~--~~~~~~~~~~~~~~~~~~  210 (329)
                      +.++.+|||+|+ |++|.+.++-+... |+ +|+.+.+++++ .+    .+++.+. . .  ..|..+.+ +..+.+++.
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~-~~~~~~~~~   82 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTD-SHPKVIDAA   82 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChH-HHHHHHHHH
Confidence            456889999987 99999999876666 47 78888776654 32    2333332 1 1  22333322 233334433


Q ss_pred             hc-CCccEEEEecCC
Q 047713          211 TN-GGVDRSVECTGS  224 (329)
Q Consensus       211 ~~-~~~d~Vid~~g~  224 (329)
                      .. +++|+++.+.|.
T Consensus        83 ~~~g~id~li~~ag~   97 (253)
T PRK07904         83 FAGGDVDVAIVAFGL   97 (253)
T ss_pred             HhcCCCCEEEEeeec
Confidence            32 479999887764

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.68  E-value=0.12  Score=41.64  Aligned_cols=77  Identities=18%  Similarity=0.220  Sum_probs=53.1

Q ss_pred             CCCCCeEEEEcCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          142 PKKGQSVAIFGLGA-VGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       142 ~~~g~~VlI~Gag~-iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      --.|.+|+|.|+|. +|..++..+...|+ +|..+.++.+.                     ..+.+.     .+|+||.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~---------------------l~~~l~-----~aDiVIs   93 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKN---------------------LKEHTK-----QADIVIV   93 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchh---------------------HHHHHh-----hCCEEEE
Confidence            35799999999986 59989999998998 67777654211                     222222     3799999


Q ss_pred             ecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          221 CTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       221 ~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +++.+..+..  +.++++ -.++.++.+
T Consensus        94 at~~~~ii~~--~~~~~~-~viIDla~p  118 (168)
T cd01080          94 AVGKPGLVKG--DMVKPG-AVVIDVGIN  118 (168)
T ss_pred             cCCCCceecH--HHccCC-eEEEEccCC
Confidence            9988664333  346665 667777653

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.67  E-value=0.11  Score=44.37  Aligned_cols=79  Identities=18%  Similarity=0.191  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ |.+|..++..+...|. +|+.+++++++.+.+.    +.+...   ..|..+. ++..+.+++...  +
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP-EAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            4678999986 9999999999988998 8888888876654332    222211   2233222 123344444322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+++.+.|.
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=95.67  E-value=0.098  Score=45.00  Aligned_cols=102  Identities=18%  Similarity=0.206  Sum_probs=66.3

Q ss_pred             ccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhhc-
Q 047713          139 VAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       139 ~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      ..+....++||-+|.+ +|..++.+|+.++. .++++++.+++..+.++    +.|...-+.....+  ..+.+.++.. 
T Consensus        74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~--a~e~L~~l~~~  150 (247)
T PLN02589         74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP--ALPVLDQMIED  150 (247)
T ss_pred             HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEecc--HHHHHHHHHhc
Confidence            3445556789988863 58888888887632 28999999998877664    45644333333333  5555555431 


Q ss_pred             ----CCccEEEEecC---CHHHHHHHHHhhccCCeEEEE
Q 047713          213 ----GGVDRSVECTG---SVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       213 ----~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~  244 (329)
                          +.||+||--..   ....++.++++|+++ |.++.
T Consensus       151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~  188 (247)
T PLN02589        151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY  188 (247)
T ss_pred             cccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence                47999974332   234577888999986 76553

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.64  E-value=0.11  Score=44.28  Aligned_cols=78  Identities=14%  Similarity=0.151  Sum_probs=49.8

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-FNEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRSV  219 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~Vi  219 (329)
                      ++++||+|+ +.+|.++++.+...|+ +|+.++++++. .+.+++.+... ..|..+. ++..+.+.+...  +++|+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFSTN-AGIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCCH-HHHHHHHHHHHhhCCCccEEE
Confidence            468999986 9999999998888899 78877776543 34445555422 2233222 123344444332  3699999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      ++.|.
T Consensus        80 ~~ag~   84 (236)
T PRK06483         80 HNASD   84 (236)
T ss_pred             ECCcc
Confidence            98873

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.62  E-value=0.098  Score=45.76  Aligned_cols=79  Identities=19%  Similarity=0.259  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCcee--eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEF--VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~--~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +++++||+|+ +  ++|.++++.+...|+ +|+.+.++++..+.    .+++|....  .|..+.+ +..+.+.+...  
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~-~v~~~~~~~~~~~   83 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIA-SVDAVFEALEKKW   83 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHH-HHHHHHHHHHHHh
Confidence            4789999987 4  899999999888999 77777665432222    233453222  2333321 23334444332  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +.+|+++++.|.
T Consensus        84 g~iD~lVnnAG~   95 (271)
T PRK06505         84 GKLDFVVHAIGF   95 (271)
T ss_pred             CCCCEEEECCcc
Confidence            479999999873

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.59  E-value=0.11  Score=45.81  Aligned_cols=43  Identities=26%  Similarity=0.361  Sum_probs=37.1

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA  185 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~  185 (329)
                      ..+.+|+|+|+|++|.+++..+...|+++++.++++.++.+.+
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l  167 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL  167 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            3567999999999999999999999998899999988776644

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.58  E-value=0.081  Score=45.68  Aligned_cols=80  Identities=21%  Similarity=0.308  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFN----EAKKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~----~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .+++++|+|+ |.+|..+++.+...|++.|+.++++.++..    .+++.+...   .+|..+.+ ++.+.+.....  +
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   83 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVE-DCRRVVAAADEAFG   83 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence            4688999987 999999999998899954888887765543    233334322   22333221 23333333221  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.58  E-value=0.089  Score=45.35  Aligned_cols=79  Identities=25%  Similarity=0.389  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE-F--VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.    +++.|... .  .|..+. .+..+.+.+...  +
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   86 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDH-DAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence            4789999986 9999999998888899 78888887765433    22223211 1  133222 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      .+|++|.+.|.
T Consensus        87 ~~d~li~~ag~   97 (255)
T PRK07523         87 PIDILVNNAGM   97 (255)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.57  E-value=0.044  Score=48.05  Aligned_cols=44  Identities=32%  Similarity=0.372  Sum_probs=38.2

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK  187 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~  187 (329)
                      +|++++|.|+|+.+.+++.-++..|+++++++.++.+|.+.+.+
T Consensus       125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            57999999999999999999999998789999898888665543

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.57  E-value=0.11  Score=44.10  Aligned_cols=78  Identities=22%  Similarity=0.283  Sum_probs=50.5

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhhc--CC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +.++||+|+ |.+|..++..+...|. .|+.+.+++++.+.    ++..+....   .|..+. ..+.+.+.+...  ++
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDE-AAVRALIEAAVEAFGA   82 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHhCC
Confidence            578999987 9999999998888899 68888888766443    233343221   233222 123444443322  36


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|.|+.++|.
T Consensus        83 id~vi~~ag~   92 (246)
T PRK05653         83 LDILVNNAGI   92 (246)
T ss_pred             CCEEEECCCc
Confidence            8999998864

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.56  E-value=0.036  Score=52.36  Aligned_cols=44  Identities=16%  Similarity=0.167  Sum_probs=35.2

Q ss_pred             hccCCCCCCeEE----EEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 047713          138 NVAKPKKGQSVA----IFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRF  182 (329)
Q Consensus       138 ~~~~~~~g~~Vl----I~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~  182 (329)
                      ...++++|+++|    |+|+ |++|.+++|+++..|+ .|+++...+.+.
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~   75 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTW   75 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCcccccc
Confidence            446778889888    8864 9999999999999999 788776555533

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.098  Score=45.72  Aligned_cols=77  Identities=21%  Similarity=0.297  Sum_probs=49.9

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCce---eeCCCCCCchHHHHHHhhhc--CCccEE
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTE---FVNPKDYDKPVQQVIADMTN--GGVDRS  218 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d~V  218 (329)
                      .++||+|+ |.+|..++..+...|. +|+.+.+++++.+.+++ ++...   ..|..+. ..+.+.+.+...  +++|+|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDS-AAVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            57999986 9999999998888898 78888888877665543 22211   1233222 123333433322  368999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      |.+.|.
T Consensus        81 i~~ag~   86 (276)
T PRK06482         81 VSNAGY   86 (276)
T ss_pred             EECCCC
Confidence            998873

>PRK06128 oxidoreductase; Provisional

Probab=95.52  E-value=0.23  Score=44.09  Aligned_cols=79  Identities=24%  Similarity=0.251  Sum_probs=47.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--h----HHHHHhcCCcee---eCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS--R----FNEAKKFGVTEF---VNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~--~----~~~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+..+.+  +    .+.+++.+....   .|..+. .+..+.+.+... 
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDE-AFCRQLVERAVKE  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHHHHHH
Confidence            4789999986 9999999998888899 6666544322  1    123334443221   233221 123333333322 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|++|++.|.
T Consensus       132 ~g~iD~lV~nAg~  144 (300)
T PRK06128        132 LGGLDILVNIAGK  144 (300)
T ss_pred             hCCCCEEEECCcc
Confidence             369999998873

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.11  Score=46.62  Aligned_cols=79  Identities=15%  Similarity=0.195  Sum_probs=49.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----C-Cc---eeeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF----G-VT---EFVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l----g-~~---~~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .|++++|+|+ +++|.+++..+...|+ +|+.+.++.++.+.+ +++    + ..   ..+|..+.+ +..+.+.++.. 
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~-sv~~~~~~~~~~   90 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLA-SVAALGEQLRAE   90 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHH-HHHHHHHHHHHh
Confidence            3789999987 9999999998888898 788887877654432 222    1 11   112333221 23333333322 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +.+|++|+++|.
T Consensus        91 ~~~iD~li~nAG~  103 (313)
T PRK05854         91 GRPIHLLINNAGV  103 (313)
T ss_pred             CCCccEEEECCcc
Confidence             369999988873

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.081  Score=45.55  Aligned_cols=77  Identities=22%  Similarity=0.314  Sum_probs=49.2

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eee--CCCCCCchHHHHHHhhhc--CC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVT-EFV--NPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~-~~~--~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      |+++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+.    +.+.. ..+  |..+. +++.+.+.+...  ++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNP-EDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhCC
Confidence            468999986 9999999999988999 8888888776554332    22221 122  22221 123333333322  36


Q ss_pred             ccEEEEecC
Q 047713          215 VDRSVECTG  223 (329)
Q Consensus       215 ~d~Vid~~g  223 (329)
                      +|++|++.|
T Consensus        79 id~lI~~ag   87 (252)
T PRK07677         79 IDALINNAA   87 (252)
T ss_pred             ccEEEECCC
Confidence            899999887

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.50  E-value=0.092  Score=45.94  Aligned_cols=79  Identities=20%  Similarity=0.267  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc------eeeCCCCCCchHHHHHH---h
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVT------EFVNPKDYDKPVQQVIA---D  209 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~------~~~~~~~~~~~~~~~~~---~  209 (329)
                      .|+.+||+|+ .++|.+++..+...|+ +|+.+.+++++.+...    ..+..      ...|..+.+ +..+.+.   +
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~l~~~~~~   84 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEV-DVEKLVEFAVE   84 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHH-HHHHHHHHHHH
Confidence            5889999976 9999999999999999 8888888888754432    22222      222333221 2222222   2


Q ss_pred             hhcCCccEEEEecCC
Q 047713          210 MTNGGVDRSVECTGS  224 (329)
Q Consensus       210 ~~~~~~d~Vid~~g~  224 (329)
                      ...|++|+.++..|.
T Consensus        85 ~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGA   99 (270)
T ss_pred             HhCCCCCEEEEcCCc
Confidence            223579999988874

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.50  E-value=0.1  Score=45.21  Aligned_cols=79  Identities=24%  Similarity=0.294  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK---FGVTE---FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      ++.+++|+|+ |.+|.+++..+...|+ +|+.++++++..+..++   .+...   ..|..+. .+..+.+.+...  +.
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDP-ASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence            4689999986 9999999998888899 78888877654333332   23221   1232221 123333333322  36


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|.+.|.
T Consensus        83 id~vi~~ag~   92 (263)
T PRK08226         83 IDILVNNAGV   92 (263)
T ss_pred             CCEEEECCCc
Confidence            8999998873

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=95.50  E-value=0.037  Score=46.19  Aligned_cols=101  Identities=19%  Similarity=0.265  Sum_probs=65.2

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhc---
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTN---  212 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~---  212 (329)
                      +....++||-+|.+ +|..++.+|+.+.- .++++++.++++.+.+++    .|...-+.....+  ..+.+.++..   
T Consensus        42 ~~~~~k~vLEIGt~-~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gd--a~~~l~~l~~~~~  118 (205)
T PF01596_consen   42 RLTRPKRVLEIGTF-TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGD--ALEVLPELANDGE  118 (205)
T ss_dssp             HHHT-SEEEEESTT-TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES---HHHHHHHHHHTTT
T ss_pred             HhcCCceEEEeccc-cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEec--cHhhHHHHHhccC
Confidence            34456799999875 48889999987642 399999999998877644    4554333333333  4555555432   


Q ss_pred             -CCccEEEEecCC---HHHHHHHHHhhccCCeEEEEe
Q 047713          213 -GGVDRSVECTGS---VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       213 -~~~d~Vid~~g~---~~~~~~~~~~l~~~~G~vv~~  245 (329)
                       +.||.||--...   ...++.++++|+++ |.++.=
T Consensus       119 ~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~D  154 (205)
T PF01596_consen  119 EGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIAD  154 (205)
T ss_dssp             TTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEc
Confidence             369999743333   24577888999986 666543

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.49  E-value=0.097  Score=45.03  Aligned_cols=79  Identities=18%  Similarity=0.244  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhh--cC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMT--NG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~--~~  213 (329)
                      .+++++|+|+ |.+|..++..+...|+ +|+.+++++++.+.    +++.+...   ..|..+. .+..+.+.+..  .+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRD-AEVKALVEQTIAAYG   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHhC
Confidence            4789999987 9999999998888898 78888887765432    23333321   1222221 12333333322  13


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|.+.|.
T Consensus        84 ~id~li~~ag~   94 (253)
T PRK06172         84 RLDYAFNNAGI   94 (253)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>PRK04457 spermidine synthase; Provisional

Probab=95.48  E-value=0.21  Score=43.50  Aligned_cols=98  Identities=18%  Similarity=0.169  Sum_probs=65.5

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCc---eeeCCCCCCchHHHHHHhhhcCCccEE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-GVT---EFVNPKDYDKPVQQVIADMTNGGVDRS  218 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-g~~---~~~~~~~~~~~~~~~~~~~~~~~~d~V  218 (329)
                      .++++||++|.|. |..+..+++.....++++++.+++-.+.+++. +..   .-+.....+  ..+.+.+. .+.+|+|
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~D--a~~~l~~~-~~~yD~I  140 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEAD--GAEYIAVH-RHSTDVI  140 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECC--HHHHHHhC-CCCCCEE
Confidence            3567899999874 88888888877545899999999999988764 321   111111122  44444432 3479998


Q ss_pred             E-EecC---------CHHHHHHHHHhhccCCeEEEEe
Q 047713          219 V-ECTG---------SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       219 i-d~~g---------~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      + |...         ..+.++.+.+.|+++ |.++.-
T Consensus       141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin  176 (262)
T PRK04457        141 LVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN  176 (262)
T ss_pred             EEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence            6 4322         146788899999998 998774

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.47  E-value=0.1  Score=44.98  Aligned_cols=79  Identities=19%  Similarity=0.329  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCce---eeCCCCCCchHHHHHHhhhc--CCc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS--RFNEAKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGV  215 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~--~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~  215 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+.+++.  ..+.+++.+...   ..|..+.+ +..+.+.+...  +++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQK-DIDSIVSQAVEVMGHI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHH-HHHHHHHHHHHHcCCC
Confidence            4789999986 9999999998888999 7777765432  123344455322   22333322 23344443322  369


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |+++++.|.
T Consensus        85 D~lv~~ag~   93 (251)
T PRK12481         85 DILINNAGI   93 (251)
T ss_pred             CEEEECCCc
Confidence            999998873

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.45  E-value=0.11  Score=44.86  Aligned_cols=79  Identities=23%  Similarity=0.357  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc---eeeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVT---EFVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~---~~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+...    +.+..   ...|..+. +++.+.+.++..  +
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~-~~i~~~~~~~~~~~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADE-ADIERLAEETLERFG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence            4789999986 9999999998888999 7888888777654432    22322   12233222 123333333222  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|.+|.+.|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.45  E-value=0.098  Score=45.22  Aligned_cols=79  Identities=23%  Similarity=0.279  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc-----CCc---eeeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF-----GVT---EFVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l-----g~~---~~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+ +++     +..   ...|..+. .+....+.+... 
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDA-ASVAAAVAAAEEA   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCH-HHHHHHHHHHHHH
Confidence            4789999986 9999999998888999 788888877665432 222     211   11233222 123333333322 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +.+|++|++.|.
T Consensus        84 ~g~id~li~~ag~   96 (260)
T PRK07063         84 FGPLDVLVNNAGI   96 (260)
T ss_pred             hCCCcEEEECCCc
Confidence             369999998873

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.45  E-value=0.12  Score=47.84  Aligned_cols=90  Identities=24%  Similarity=0.362  Sum_probs=55.4

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHh--cCC---ceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          148 VAIFGLGAVGLAAAEGARVSGAS-RIIGVDLNPSRFNEAKK--FGV---TEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~-~vv~~~~~~~~~~~~~~--lg~---~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      |+|+|+|.+|..++..+...+.. +|+..+++.++.+.+.+  .+.   ...+|..+    .. .+.++.. +.|+|++|
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~----~~-~l~~~~~-~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND----PE-SLAELLR-GCDVVINC   74 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT----HH-HHHHHHT-TSSEEEE-
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC----HH-HHHHHHh-cCCEEEEC
Confidence            68888899999999988866543 78999999998776543  222   12233322    22 2444433 36999999


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEE
Q 047713          222 TGSVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~  244 (329)
                      +|.......+-.|+..+ -+++.
T Consensus        75 ~gp~~~~~v~~~~i~~g-~~yvD   96 (386)
T PF03435_consen   75 AGPFFGEPVARACIEAG-VHYVD   96 (386)
T ss_dssp             SSGGGHHHHHHHHHHHT--EEEE
T ss_pred             CccchhHHHHHHHHHhC-CCeec
Confidence            98654444555566665 67776

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.45  E-value=0.038  Score=48.15  Aligned_cols=76  Identities=26%  Similarity=0.388  Sum_probs=49.2

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEEEE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRSVE  220 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~Vid  220 (329)
                      +++++|+|+ |.+|..+++.+...|+ +|++++++.++.+...  +... ..|..+. +++.+.+++...  +.+|++|+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d~-~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTDD-ASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCCH-HHHHHHHHHHHHhCCCCCEEEE
Confidence            568999986 9999999998888898 7888888765543221  2221 2233222 234444444332  36999999


Q ss_pred             ecCC
Q 047713          221 CTGS  224 (329)
Q Consensus       221 ~~g~  224 (329)
                      +.|.
T Consensus        80 ~ag~   83 (270)
T PRK06179         80 NAGV   83 (270)
T ss_pred             CCCC
Confidence            9984

>PRK06194 hypothetical protein; Provisional

Probab=95.43  E-value=0.097  Score=46.01  Aligned_cols=78  Identities=21%  Similarity=0.281  Sum_probs=48.9

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCce---eeCCCCCCchHHHHHHhhh--cCC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF---GVTE---FVNPKDYDKPVQQVIADMT--NGG  214 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  214 (329)
                      +.++||+|+ |.+|..++..+...|+ +|+.++++.++.+.. .++   +...   ..|..+. .++.+.+....  .++
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDA-AQVEALADAALERFGA   83 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence            678999986 9999999998888898 788888776554432 222   3221   1122221 12333333322  136


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|++.|.
T Consensus        84 id~vi~~Ag~   93 (287)
T PRK06194         84 VHLLFNNAGV   93 (287)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.43  E-value=0.12  Score=45.25  Aligned_cols=69  Identities=20%  Similarity=0.109  Sum_probs=49.0

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      .+..+++++|.|+|+.+.+++..++..|++++..+.++.++.+.+ +.++..           +...+   ....+|+|+
T Consensus       118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~---~~~~~dlvI  183 (272)
T PRK12550        118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL---GGIEADILV  183 (272)
T ss_pred             CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc---ccccCCEEE
Confidence            344567899999999999999999999997899998988877654 344311           11011   112589999


Q ss_pred             EecC
Q 047713          220 ECTG  223 (329)
Q Consensus       220 d~~g  223 (329)
                      +|+.
T Consensus       184 NaTp  187 (272)
T PRK12550        184 NVTP  187 (272)
T ss_pred             ECCc
Confidence            9974

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.43  E-value=0.083  Score=45.67  Aligned_cols=78  Identities=24%  Similarity=0.326  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK---FGVTE---FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      .++++||+|+ |.+|.++++.+...|+ +|+.+++++...+..++   .+.+.   ..|..+.+ +..+.+.+...  ++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   84 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYA-GAQAAMAAAVEAFGR   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHH-HHHHHHHHHHHHcCC
Confidence            3689999986 9999999998888898 78888876543333333   33321   22333321 23333443322  36


Q ss_pred             ccEEEEecC
Q 047713          215 VDRSVECTG  223 (329)
Q Consensus       215 ~d~Vid~~g  223 (329)
                      +|++++++|
T Consensus        85 id~lv~nAg   93 (260)
T PRK12823         85 IDVLINNVG   93 (260)
T ss_pred             CeEEEECCc
Confidence            999999886

>PRK05717 oxidoreductase; Validated

Probab=95.41  E-value=0.12  Score=44.66  Aligned_cols=79  Identities=23%  Similarity=0.290  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .|.++||+|+ |.+|..++..+...|+ +|+.++++.++.+. .++++...   ..|..+. .+..+.+.++..  +++|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g~id   86 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADE-AQVAAGVAEVLGQFGRLD   86 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCH-HHHHHHHHHHHHHhCCCC
Confidence            4789999986 9999999998888898 78888776654433 34444321   2233222 123333343332  3689


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|.+.|.
T Consensus        87 ~li~~ag~   94 (255)
T PRK05717         87 ALVCNAAI   94 (255)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.13  Score=44.73  Aligned_cols=78  Identities=21%  Similarity=0.364  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+..    .+.+...   .+|..+. .+..+.+++...  +
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~~   85 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDY-AAVEAAFAQIADEFG   85 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            5789999987 9999999998888999 788888876654322    2222211   2233322 224444444332  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|.+.|
T Consensus        86 ~iD~vi~~ag   95 (264)
T PRK07576         86 PIDVLVSGAA   95 (264)
T ss_pred             CCCEEEECCC
Confidence            6899998775

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.41  E-value=0.41  Score=41.69  Aligned_cols=35  Identities=29%  Similarity=0.486  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      .+.+|+|.|.|++|..++..+...|..++..++.+
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            36789999999999999999999998888888765

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.40  E-value=0.1  Score=45.69  Aligned_cols=79  Identities=22%  Similarity=0.323  Sum_probs=50.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK---FGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+ ++   .+...   ..|..+. .++.+.+.+...  +
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g   82 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHR-EEVTHLADEAFRLLG   82 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCH-HHHHHHHHHHHHHcC
Confidence            4789999986 9999999998888999 788887776655432 22   33321   1233222 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        83 ~id~li~nAg~   93 (275)
T PRK05876         83 HVDVVFSNAGI   93 (275)
T ss_pred             CCCEEEECCCc
Confidence            68999998873

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=95.39  E-value=0.095  Score=52.15  Aligned_cols=114  Identities=25%  Similarity=0.287  Sum_probs=69.5

Q ss_pred             cccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc
Q 047713           98 TFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD  176 (329)
Q Consensus        98 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~  176 (329)
                      +..+|..+++...+.+ +.++++++=.-..          .....-.++++||+|+ |.+|.++++.+...|+ +|+.++
T Consensus       378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~~~----------~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~  445 (676)
T TIGR02632       378 AVSEYVSLPEQEAFDI-EYWPLEEAKLRRM----------PKEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLAD  445 (676)
T ss_pred             cccceecCchhhccch-hhhhhhHHhhccC----------CCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEe
Confidence            3456777777777777 6777776421100          0111224789999986 9999999998888899 888888


Q ss_pred             CChhhHHHH-Hh----cCCc----eeeCCCCCCchHHHHHHhhhc--CCccEEEEecCC
Q 047713          177 LNPSRFNEA-KK----FGVT----EFVNPKDYDKPVQQVIADMTN--GGVDRSVECTGS  224 (329)
Q Consensus       177 ~~~~~~~~~-~~----lg~~----~~~~~~~~~~~~~~~~~~~~~--~~~d~Vid~~g~  224 (329)
                      ++.++.+.+ ++    .+..    ...|..+. .++.+.+.+...  +++|++|++.|.
T Consensus       446 r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~-~~v~~a~~~i~~~~g~iDilV~nAG~  503 (676)
T TIGR02632       446 LNLEAAEAVAAEINGQFGAGRAVALKMDVTDE-QAVKAAFADVALAYGGVDIVVNNAGI  503 (676)
T ss_pred             CCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH-HHHHHHHHHHHHhcCCCcEEEECCCC
Confidence            877665433 22    2221    12233222 123344443322  379999999884

>PRK08643 acetoin reductase; Validated

Probab=95.38  E-value=0.11  Score=44.77  Aligned_cols=78  Identities=22%  Similarity=0.280  Sum_probs=49.3

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      ++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ ...+.+.+...  ++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD-QVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence            568999986 9999999999888898 788888877654432    2223221   12332221 23333333322  36


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|.+.|.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            9999998864

>PLN02253 xanthoxin dehydrogenase

Probab=95.37  E-value=0.099  Score=45.79  Aligned_cols=79  Identities=19%  Similarity=0.195  Sum_probs=49.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC--c-e--eeCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV--T-E--FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~--~-~--~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      .++++||+|+ |.+|.++++.+...|+ +|+.+++++++.+. .++++.  . .  ..|..+.+ ...+.+.+...  ++
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~g~   94 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVED-DVSRAVDFTVDKFGT   94 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHH-HHHHHHHHHHHHhCC
Confidence            3789999986 9999999998888898 78888776655433 333322  1 1  12333221 23333333322  36


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|++.|.
T Consensus        95 id~li~~Ag~  104 (280)
T PLN02253         95 LDIMVNNAGL  104 (280)
T ss_pred             CCEEEECCCc
Confidence            9999998874

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.36  E-value=0.11  Score=44.54  Aligned_cols=78  Identities=18%  Similarity=0.223  Sum_probs=49.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCCc-ee--eCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK---FGVT-EF--VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~---lg~~-~~--~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++.++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+ ++   .+.. ..  .|..+. .+..+.+++...  +
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   84 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEM-EQIDALFAHIRERHG   84 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            3678999986 9999999999988898 888888877655432 22   2321 11  122221 123333333322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      .+|+++.+.|
T Consensus        85 ~id~li~~ag   94 (252)
T PRK07035         85 RLDILVNNAA   94 (252)
T ss_pred             CCCEEEECCC
Confidence            6899998887

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.35  E-value=0.11  Score=44.67  Aligned_cols=79  Identities=20%  Similarity=0.236  Sum_probs=49.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhc--CCc-ee--eCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKF--GVT-EF--VNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~l--g~~-~~--~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      ++.+++|+|+ |.+|..++..+...|+ +|+.+.++.++.+. ..++  +.. ..  .|..+. .+..+.+.+...  ++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSA-EAVEALVDFVAARWGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCC
Confidence            3679999986 9999999998877898 78888877665443 2222  221 11  132222 123333333322  37


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|.+.|.
T Consensus        82 id~vi~~ag~   91 (252)
T PRK06138         82 LDVLVNNAGF   91 (252)
T ss_pred             CCEEEECCCC
Confidence            9999998873

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.34  E-value=0.093  Score=51.90  Aligned_cols=76  Identities=22%  Similarity=0.290  Sum_probs=54.2

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHhcCCceeeCCCCCC-c
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS---------------------RFNEAKKFGVTEFVNPKDYD-K  201 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~---------------------~~~~~~~lg~~~~~~~~~~~-~  201 (329)
                      .+++|+|+|+|+.|+.++..++..|. .|+.++..+.                     +.++++++|.+..++..-.. .
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            48999999999999999999999999 6888876542                     45667788876655543211 0


Q ss_pred             hHHHHHHhhhcCCccEEEEecCCH
Q 047713          202 PVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       202 ~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      .+    .++. .++|.||.++|..
T Consensus       388 ~~----~~l~-~~~DaV~latGa~  406 (639)
T PRK12809        388 TF----SDLT-SEYDAVFIGVGTY  406 (639)
T ss_pred             CH----HHHH-hcCCEEEEeCCCC
Confidence            12    1221 2699999999864

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.34  E-value=0.12  Score=44.77  Aligned_cols=79  Identities=20%  Similarity=0.288  Sum_probs=48.4

Q ss_pred             CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce--eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTE--FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~--~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +++++||+|+   +++|.++++.+...|+ +|+.+.+.++..+.+++    ++...  ..|..+. ++..+.+.+...  
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   82 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASD-DEINQVFADLGKHW   82 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCH-HHHHHHHHHHHHHh
Confidence            4789999983   5899999998888999 77776554433333333    33222  2233322 234444444332  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|+++++.|.
T Consensus        83 g~iD~lVnnAG~   94 (261)
T PRK08690         83 DGLDGLVHSIGF   94 (261)
T ss_pred             CCCcEEEECCcc
Confidence            379999999874

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.33  E-value=0.11  Score=45.15  Aligned_cols=78  Identities=15%  Similarity=0.219  Sum_probs=47.6

Q ss_pred             CCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCcee--eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTEF--VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~~--~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|++++|+|+ +  ++|.++++.+...|+ +|+.+.++++..+.+    ++++....  .|..+.+ +..+.+++...  
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~-~v~~~~~~~~~~~   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK-SISNLFDDIKEKW   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH-HHHHHHHHHHHHc
Confidence            4788999987 4  799999988888899 777776654222222    23343222  3433322 23444444332  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +.+|+++++.|
T Consensus        85 g~iDilVnnag   95 (260)
T PRK06603         85 GSFDFLLHGMA   95 (260)
T ss_pred             CCccEEEEccc
Confidence            36999998876

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.33  E-value=0.091  Score=44.80  Aligned_cols=80  Identities=21%  Similarity=0.338  Sum_probs=49.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCC-c---eeeCCCCC-CchH---HHHHHhh
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-K---KFGV-T---EFVNPKDY-DKPV---QQVIADM  210 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~---~lg~-~---~~~~~~~~-~~~~---~~~~~~~  210 (329)
                      ++.+++|+|+ |.+|..+++.+...|. +|+.+++++++.+.+ .   +.+. .   ...|..+. ...+   .+.+.+.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            4679999986 9999999998888899 788888888765433 2   2221 1   11222211 1112   2233333


Q ss_pred             hcCCccEEEEecCC
Q 047713          211 TNGGVDRSVECTGS  224 (329)
Q Consensus       211 ~~~~~d~Vid~~g~  224 (329)
                      ..+.+|++|.+.|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            32468999999873

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.31  E-value=0.089  Score=45.31  Aligned_cols=74  Identities=19%  Similarity=0.277  Sum_probs=47.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--c-eeeCCCCCCchHHHHHHhhhc--CCccE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV--T-EFVNPKDYDKPVQQVIADMTN--GGVDR  217 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~--~-~~~~~~~~~~~~~~~~~~~~~--~~~d~  217 (329)
                      .++++||+|+ |.+|.++++.+...|+ +|+.+++++++    +..+.  . ...|..+. .++.+.+.....  +.+|+
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDP-DQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            4789999986 9999999998888898 78888777654    11221  1 11232221 123333333322  36899


Q ss_pred             EEEecC
Q 047713          218 SVECTG  223 (329)
Q Consensus       218 Vid~~g  223 (329)
                      +|.+.|
T Consensus        79 vi~~ag   84 (252)
T PRK07856         79 LVNNAG   84 (252)
T ss_pred             EEECCC
Confidence            999887

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.31  E-value=0.12  Score=46.38  Aligned_cols=78  Identities=24%  Similarity=0.324  Sum_probs=49.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC---c-e--eeCCCCCCchHHHHHHhhh--cC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV---T-E--FVNPKDYDKPVQQVIADMT--NG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~---~-~--~~~~~~~~~~~~~~~~~~~--~~  213 (329)
                      ++.+++|+|+ |.+|..++..+...|+ +|+.+++++++.+. .+++..   . .  ..|..+.+ +..+.+.+..  .+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~   82 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLD-SVRRFVDDFRALGK   82 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHH-HHHHHHHHHHHhCC
Confidence            4678999986 9999999998888898 78888887776543 333321   1 1  12332211 2333333322  22


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|++.|
T Consensus        83 ~iD~li~nAg   92 (322)
T PRK07453         83 PLDALVCNAA   92 (322)
T ss_pred             CccEEEECCc
Confidence            6999999887

>PRK09186 flagellin modification protein A; Provisional

Probab=95.28  E-value=0.12  Score=44.38  Aligned_cols=78  Identities=22%  Similarity=0.434  Sum_probs=50.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCc---e-eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF----GVT---E-FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l----g~~---~-~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      +++++||+|+ |.+|.+++..+...|+ +|+.+.+++++.+.+ +++    +..   . ..|..+.+ ++.+.+.+... 
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQE-SLEEFLSKSAEK   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHH-HHHHHHHHHHHH
Confidence            4789999986 9999999999988998 788888777665432 222    221   1 22333321 23333443322 


Q ss_pred             -CCccEEEEecC
Q 047713          213 -GGVDRSVECTG  223 (329)
Q Consensus       213 -~~~d~Vid~~g  223 (329)
                       +++|++|++.+
T Consensus        81 ~~~id~vi~~A~   92 (256)
T PRK09186         81 YGKIDGAVNCAY   92 (256)
T ss_pred             cCCccEEEECCc
Confidence             36899999875

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.28  E-value=0.12  Score=44.66  Aligned_cols=79  Identities=25%  Similarity=0.313  Sum_probs=49.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhh--cC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMT--NG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~--~~  213 (329)
                      ++.++||+|+ |.+|..++..+...|+ .|+.+.+++++.+.    +++.+....   .|..+.+ .+.+.+.+..  .+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   83 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNED-AVNAGIDKVAERFG   83 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            3789999987 9999999999988999 78888787755432    233443321   1222211 2223333222  13


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|.+.|.
T Consensus        84 ~~d~vi~~ag~   94 (262)
T PRK13394         84 SVDILVSNAGI   94 (262)
T ss_pred             CCCEEEECCcc
Confidence            68999998874

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.26  E-value=0.53  Score=39.26  Aligned_cols=91  Identities=14%  Similarity=0.043  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-h-HHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS-R-FNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~-~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      .|.+|||.|+|.+|...+..+...|+ +|++++.... . .+++.+ +.- ........        +..-.++|+||-+
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i-~~~~~~~~--------~~~l~~adlViaa   77 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKI-RWKQKEFE--------PSDIVDAFLVIAA   77 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCE-EEEecCCC--------hhhcCCceEEEEc
Confidence            47899999999999999988888887 7777754321 1 122222 211 11111111        0001268999999


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          222 TGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ++.+ .++..+...+.. +.++....
T Consensus        78 T~d~-elN~~i~~~a~~-~~lvn~~d  101 (202)
T PRK06718         78 TNDP-RVNEQVKEDLPE-NALFNVIT  101 (202)
T ss_pred             CCCH-HHHHHHHHHHHh-CCcEEECC
Confidence            9775 444444444444 55555543

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.14  Score=44.26  Aligned_cols=77  Identities=22%  Similarity=0.282  Sum_probs=50.8

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcC-Cc---eeeCCCCCCchHHHHHHhhh---cCCcc
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFG-VT---EFVNPKDYDKPVQQVIADMT---NGGVD  216 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg-~~---~~~~~~~~~~~~~~~~~~~~---~~~~d  216 (329)
                      +++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. .++ ..   ...|..+.+ ++.+.+++..   .+++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRA-AWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCC
Confidence            47899986 9999999998888898 8888888887765543 332 11   122333322 2344444332   34799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (260)
T PRK08267         80 VLFNNAGI   87 (260)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.24  E-value=0.14  Score=44.13  Aligned_cols=77  Identities=23%  Similarity=0.403  Sum_probs=49.9

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---eeCCCCCCchHHHHHHhhhc--CCccE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVDR  217 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d~  217 (329)
                      ++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++++...   ..|..+. .+....+.+...  +.+|+
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQ-DSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            678999986 9999999999988999 788888887766543 3343211   1222221 123333333322  36899


Q ss_pred             EEEecC
Q 047713          218 SVECTG  223 (329)
Q Consensus       218 Vid~~g  223 (329)
                      ++.+.|
T Consensus        84 li~~ag   89 (257)
T PRK07067         84 LFNNAA   89 (257)
T ss_pred             EEECCC
Confidence            998876

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=95.23  E-value=0.29  Score=43.24  Aligned_cols=93  Identities=19%  Similarity=0.214  Sum_probs=55.5

Q ss_pred             CeEEEEcCCHHHHH-HHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          146 QSVAIFGLGAVGLA-AAEGARVSGASRIIGVDLNPS--RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       146 ~~VlI~Gag~iG~a-ai~la~~~G~~~vv~~~~~~~--~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      -+|.|+|.|.+|.. +..+.+.-+.+.+.+++.+++  .+++++++|......    +  +...+....-.++|+||+++
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~~----~--ie~LL~~~~~~dIDiVf~AT   78 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSAE----G--IDGLLAMPEFDDIDIVFDAT   78 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCcccC----C--HHHHHhCcCCCCCCEEEECC
Confidence            46889999999987 444555446633444444443  346678888543221    1  33333221113699999999


Q ss_pred             CCHHHHHHHHHhhccCCeEEEEe
Q 047713          223 GSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       223 g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      +...+.+.+..++..+ -+++..
T Consensus        79 ~a~~H~e~a~~a~eaG-k~VID~  100 (302)
T PRK08300         79 SAGAHVRHAAKLREAG-IRAIDL  100 (302)
T ss_pred             CHHHHHHHHHHHHHcC-CeEEEC
Confidence            8777777777666654 444444

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.23  E-value=0.14  Score=44.40  Aligned_cols=78  Identities=24%  Similarity=0.334  Sum_probs=49.1

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+    +..+...   ..|..+. ..+...+.+...  ++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDA-EACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            357999987 9999999998888898 888888877654322    2233321   1122221 123333343322  36


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|+||.+.|.
T Consensus        79 id~vi~~ag~   88 (263)
T PRK06181         79 IDILVNNAGI   88 (263)
T ss_pred             CCEEEECCCc
Confidence            8999999873

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.22  E-value=0.16  Score=43.75  Aligned_cols=79  Identities=20%  Similarity=0.279  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++.+++|+|+ |.+|.+++..+...|+ +|+.+++++++.+.    +++.+...   ..|..+. .++.+.+.+...  +
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   87 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADE-EAVAAAFARIDAEHG   87 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence            4889999986 9999999998888898 88888887765433    22334211   1132221 223444443322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|.+|.+.|.
T Consensus        88 ~id~vi~~ag~   98 (256)
T PRK06124         88 RLDILVNNVGA   98 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999988874

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=95.19  E-value=0.29  Score=42.94  Aligned_cols=97  Identities=19%  Similarity=0.218  Sum_probs=65.4

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCcee-e-CCCCC--CchHHHHHHhhhcCCccEEE-
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-GVTEF-V-NPKDY--DKPVQQVIADMTNGGVDRSV-  219 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-g~~~~-~-~~~~~--~~~~~~~~~~~~~~~~d~Vi-  219 (329)
                      ++|||.|.|. |-.+-.++++...+++++++.+++-.++++++ +.... . +++-.  -.+..+.+++... ++|+|| 
T Consensus        78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~  155 (282)
T COG0421          78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV  155 (282)
T ss_pred             CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence            5999997543 56677888888888999999999999998874 32221 1 11110  0124445554433 799986 


Q ss_pred             EecCC---------HHHHHHHHHhhccCCeEEEEe
Q 047713          220 ECTGS---------VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       220 d~~g~---------~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      |+.-.         .+.++.+-++|+++ |.++.-
T Consensus       156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q  189 (282)
T COG0421         156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ  189 (282)
T ss_pred             cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence            44322         45688999999998 988877

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.19  E-value=0.15  Score=43.92  Aligned_cols=79  Identities=16%  Similarity=0.328  Sum_probs=48.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCce---eeCCCCCCchHHHHHHhhhc--CCc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS--RFNEAKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGV  215 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~--~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~  215 (329)
                      .|+++||+|+ |.+|.++++.+...|+ +|+.++..+.  ..+.+++++...   ..|..+. ++..+.+.+...  +++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKI-DGIPALLERAVAEFGHI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhCCC
Confidence            3789999986 9999999999888999 7777755432  223344444321   1222221 123333443322  379


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |++|++.|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.18  E-value=0.14  Score=44.71  Aligned_cols=77  Identities=16%  Similarity=0.236  Sum_probs=48.9

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc---e--eeCCCCCCchHHHHHHhhhc--
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVT---E--FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~---~--~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      ++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.    ..+..   .  ..|..+. +++.. +.+...  
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~-~~~~~~~~   79 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQ-NSIHN-FQLVLKEI   79 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCH-HHHHH-HHHHHHhc
Confidence            578999987 9999999998888898 7888887776554332    22211   1  1233322 12333 444322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|+|+.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (280)
T PRK06914         80 GRIDLLVNNAGY   91 (280)
T ss_pred             CCeeEEEECCcc
Confidence            378999998873

>PRK08317 hypothetical protein; Provisional

Probab=95.18  E-value=0.27  Score=41.74  Aligned_cols=105  Identities=23%  Similarity=0.285  Sum_probs=67.5

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcC--CceeeCCCCCCchHHHHHHhhhc
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKKFG--VTEFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      +.+...+.++++||..|+|. |..+..+++..+ ..++++++.+++..+.+++..  ....+.....+  ...  .....
T Consensus        11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d--~~~--~~~~~   85 (241)
T PRK08317         11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD--ADG--LPFPD   85 (241)
T ss_pred             HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc--ccc--CCCCC
Confidence            34566788899999999875 888888988763 338999999998888776641  11101000001  100  01122


Q ss_pred             CCccEEEEec------CCHHHHHHHHHhhccCCeEEEEec
Q 047713          213 GGVDRSVECT------GSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       213 ~~~d~Vid~~------g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +.+|+|+-..      .....+....++|+++ |.++...
T Consensus        86 ~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  124 (241)
T PRK08317         86 GSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD  124 (241)
T ss_pred             CCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence            3789887432      1234678888899998 9988765

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.17  E-value=0.21  Score=39.88  Aligned_cols=82  Identities=18%  Similarity=0.223  Sum_probs=50.5

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .|.+|+|.|+|.+|..-++.+...|+ .|.+++  ++..+.+++++.-.. ..+..        ++..-.++|+||-+++
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~~~--------~~~dl~~a~lViaaT~   79 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQKTF--------SNDDIKDAHLIYAATN   79 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-Eeccc--------ChhcCCCceEEEECCC
Confidence            47899999999999999998888898 777774  333333444542111 11111        1111126899999986


Q ss_pred             CHHHHHHHHHhhccC
Q 047713          224 SVQAMISAFECVHDG  238 (329)
Q Consensus       224 ~~~~~~~~~~~l~~~  238 (329)
                      .. ..+..+..++..
T Consensus        80 d~-e~N~~i~~~a~~   93 (157)
T PRK06719         80 QH-AVNMMVKQAAHD   93 (157)
T ss_pred             CH-HHHHHHHHHHHH
Confidence            64 455555544443

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=95.16  E-value=0.015  Score=51.25  Aligned_cols=96  Identities=24%  Similarity=0.375  Sum_probs=56.0

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceee-CCCCCCchHHHHHHhhhcCCcc
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFV-NPKDYDKPVQQVIADMTNGGVD  216 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d  216 (329)
                      ..+|++||=.|+|. |.+++..++ +|+++|++++.++...+.+++    .|....+ .....         +...+.||
T Consensus       159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~---------~~~~~~~d  227 (295)
T PF06325_consen  159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE---------DLVEGKFD  227 (295)
T ss_dssp             SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS---------CTCCS-EE
T ss_pred             ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec---------ccccccCC
Confidence            57789999887642 555555555 588899999999976665543    2322111 11111         11124799


Q ss_pred             EEEEecCCHHH---HHHHHHhhccCCeEEEEeccCC
Q 047713          217 RSVECTGSVQA---MISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       217 ~Vid~~g~~~~---~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +|+-..-..-.   .+...++++++ |.+++.|...
T Consensus       228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~  262 (295)
T PF06325_consen  228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILE  262 (295)
T ss_dssp             EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred             EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence            99966633222   23344568887 9999887633

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.15  E-value=0.16  Score=43.83  Aligned_cols=79  Identities=19%  Similarity=0.263  Sum_probs=48.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-h-HH---HHHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS-R-FN---EAKKFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~-~-~~---~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+ +.+|.++++.+...|+ +|+.++++++ . .+   .++..+...   ..|..+. ++..+.+.+...  
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~   84 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSK-ADLRAAVARTEAEL   84 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4789999986 9999999999988998 7777776543 2 12   223334221   1232222 123333433322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +.+|++|++.|.
T Consensus        85 g~id~li~~ag~   96 (254)
T PRK06114         85 GALTLAVNAAGI   96 (254)
T ss_pred             CCCCEEEECCCC
Confidence            368999999874

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.15  E-value=0.15  Score=44.11  Aligned_cols=76  Identities=21%  Similarity=0.338  Sum_probs=48.2

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCCcee--eCCCCCCchHHHHHHhhhc--CCccE
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-K---KFGVTEF--VNPKDYDKPVQQVIADMTN--GGVDR  217 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~---~lg~~~~--~~~~~~~~~~~~~~~~~~~--~~~d~  217 (329)
                      ++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ +   +.+....  .|..+. ++..+.+++...  +++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~-~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDK-DDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCH-HHHHHHHHHHHHhcCCCCE
Confidence            5899986 9999999998888899 788888877665432 2   2232112  232221 123344443322  37999


Q ss_pred             EEEecCC
Q 047713          218 SVECTGS  224 (329)
Q Consensus       218 Vid~~g~  224 (329)
                      +|++.|.
T Consensus        80 li~naG~   86 (259)
T PRK08340         80 LVWNAGN   86 (259)
T ss_pred             EEECCCC
Confidence            9998874

>PRK06398 aldose dehydrogenase; Validated

Probab=95.13  E-value=0.08  Score=45.85  Aligned_cols=74  Identities=22%  Similarity=0.318  Sum_probs=47.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTN--GGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~--~~~d~Vi  219 (329)
                      .|+++||+|+ +.+|.+++..+...|+ +|+.+++++++..     ... ...|..+.+ +..+.+.+...  +.+|++|
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSNKE-QVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            3789999986 9999999999998999 7888877654321     111 122333221 23344443332  3699999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      ++.|.
T Consensus        78 ~~Ag~   82 (258)
T PRK06398         78 NNAGI   82 (258)
T ss_pred             ECCCC
Confidence            98873

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.16  Score=43.48  Aligned_cols=77  Identities=25%  Similarity=0.406  Sum_probs=48.9

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-c-----CCc-e--eeCCCCCCchHHHHHHhhhc--
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-F-----GVT-E--FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-l-----g~~-~--~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      ++++||+|+ |.+|...+..+...|. +|+.+++++++.+.+.. +     +.. .  ..|..+. +++.+.+++...  
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH-DQVFEVFAEFRDEL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            468999986 9999999988888898 78888887776544321 1     211 1  1233322 224444444332  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|.+.|
T Consensus        80 ~~id~vi~~ag   90 (248)
T PRK08251         80 GGLDRVIVNAG   90 (248)
T ss_pred             CCCCEEEECCC
Confidence            36999999886

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.11  E-value=0.15  Score=44.57  Aligned_cols=78  Identities=23%  Similarity=0.286  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HH---hcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AK---KFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~---~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++++++|+|+ |.+|.+++..+...|+ +|+.+++++++.+. .+   +.+...   ..|..+. .+....+.+...  +
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g   86 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDK-ESLEQARQQILEDFG   86 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            4789999986 9999999999888999 78888877655433 22   223221   1233222 123333333322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|.+.|
T Consensus        87 ~id~li~~ag   96 (278)
T PRK08277         87 PCDILINGAG   96 (278)
T ss_pred             CCCEEEECCC
Confidence            7999999887

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.11  E-value=0.28  Score=41.66  Aligned_cols=78  Identities=13%  Similarity=0.115  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE-F--VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +|++++|+|+ +++|.+.+..+...|+ +|+.+.+++++.+.+    ++.+... .  .|..+. ++..+.+.+...  +
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   81 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQ-ESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence            4789999986 9999999998888999 788888877765432    2334321 1  232222 223333333321  3


Q ss_pred             -CccEEEEecC
Q 047713          214 -GVDRSVECTG  223 (329)
Q Consensus       214 -~~d~Vid~~g  223 (329)
                       .+|++|++.|
T Consensus        82 ~~iD~li~nag   92 (227)
T PRK08862         82 RAPDVLVNNWT   92 (227)
T ss_pred             CCCCEEEECCc
Confidence             6999999886

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.11  E-value=0.17  Score=43.53  Aligned_cols=79  Identities=25%  Similarity=0.362  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHh---cCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKK---FGVTE-F--VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+. ..+   .+... .  .|..+. +.+.+.+.++..  +
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   85 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHK-QEVEAAIEHIEKDIG   85 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCH-HHHHHHHHHHHHhcC
Confidence            4789999986 9999999998888898 78888887665433 222   23211 1  232222 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+++.+.|.
T Consensus        86 ~id~vi~~ag~   96 (254)
T PRK08085         86 PIDVLINNAGI   96 (254)
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.11  E-value=0.094  Score=42.39  Aligned_cols=92  Identities=17%  Similarity=0.268  Sum_probs=58.0

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--ceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV--TEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .|.|+|+ |.+|...++-|+..|. .|+++.++++|....+..-+  ..+++.       .. +.+. -.++|+||++.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~-------~~-~a~~-l~g~DaVIsA~~   71 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDL-------TS-LASD-LAGHDAVISAFG   71 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccCh-------hh-hHhh-hcCCceEEEecc
Confidence            4678886 9999999999999999 89999999988754322211  111111       11 1111 127999999998


Q ss_pred             CH--H-------HHHHHHHhhccC-CeEEEEeccC
Q 047713          224 SV--Q-------AMISAFECVHDG-WGVAVLVGVP  248 (329)
Q Consensus       224 ~~--~-------~~~~~~~~l~~~-~G~vv~~g~~  248 (329)
                      ..  .       ..+..+..|+.. --|+..+|..
T Consensus        72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA  106 (211)
T COG2910          72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGA  106 (211)
T ss_pred             CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence            54  1       233455666652 1477777753

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.09  E-value=0.18  Score=44.99  Aligned_cols=91  Identities=22%  Similarity=0.387  Sum_probs=59.1

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      .+|.|+|.|.+|...+..++..|. ..|++.++++++.+.+++.|...... .  +  ....+     ...|+||.|+..
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-~--~--~~~~~-----~~aDvViiavp~   76 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-T--S--AAEAV-----KGADLVILCVPV   76 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-C--C--HHHHh-----cCCCEEEECCCH
Confidence            579999999999999998887774 37889999998888888877532111 0  1  11111     247999999864


Q ss_pred             HHH---HHHHHHhhccCCeEEEEecc
Q 047713          225 VQA---MISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       225 ~~~---~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ...   +......++++ ..++.++.
T Consensus        77 ~~~~~v~~~l~~~l~~~-~iv~dvgs  101 (307)
T PRK07502         77 GASGAVAAEIAPHLKPG-AIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence            322   22222345555 56666554

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.09  E-value=0.16  Score=44.29  Aligned_cols=78  Identities=22%  Similarity=0.413  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcC-----Cc-ee--eCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFG-----VT-EF--VNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg-----~~-~~--~~~~~~~~~~~~~~~~~~~-  212 (329)
                      ++.++||+|+ |.+|.++++.+...|+ +|+.+++++++.+. .+++.     .. ..  .|..+. .+..+.+++... 
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~   83 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE-DQVARAVDAATAW   83 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCH-HHHHHHHHHHHHH
Confidence            3689999987 9999999999988999 78888887665432 22221     11 11  133222 123344443332 


Q ss_pred             -CCccEEEEecC
Q 047713          213 -GGVDRSVECTG  223 (329)
Q Consensus       213 -~~~d~Vid~~g  223 (329)
                       +++|++|.+.|
T Consensus        84 ~~~~d~li~~ag   95 (276)
T PRK05875         84 HGRLHGVVHCAG   95 (276)
T ss_pred             cCCCCEEEECCC
Confidence             36899999887

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.08  E-value=0.16  Score=45.23  Aligned_cols=78  Identities=15%  Similarity=0.245  Sum_probs=48.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc-----CCc-e--eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF-----GVT-E--FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l-----g~~-~--~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+.++.++.+.+ +++     +.. .  ..|..+.+ +..+.+.++.. 
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~~   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLA-SVRAAADALRAA   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHH-HHHHHHHHHHhh
Confidence            5789999986 9999999998888898 788887776654322 221     111 1  12332221 23333333322 


Q ss_pred             -CCccEEEEecC
Q 047713          213 -GGVDRSVECTG  223 (329)
Q Consensus       213 -~~~d~Vid~~g  223 (329)
                       +++|++|.++|
T Consensus        93 ~~~iD~li~nAg  104 (306)
T PRK06197         93 YPRIDLLINNAG  104 (306)
T ss_pred             CCCCCEEEECCc
Confidence             36999999887

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.08  E-value=0.18  Score=44.26  Aligned_cols=93  Identities=16%  Similarity=0.220  Sum_probs=62.3

Q ss_pred             ccccccchhhhhhhccCC-CCCCeEEEEcCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCch
Q 047713          125 LSCGISTGFGATVNVAKP-KKGQSVAIFGLG-AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKP  202 (329)
Q Consensus       125 ~~~~~~ta~~~l~~~~~~-~~g~~VlI~Gag-~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~  202 (329)
                      +||+....+. +++...+ -.|.+|+|.|.| .+|.-++.++...|+ .|+.+.+....                     
T Consensus       138 ~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~~---------------------  194 (286)
T PRK14175        138 VPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSKD---------------------  194 (286)
T ss_pred             CCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCchh---------------------
Confidence            4443333333 3444443 369999999985 599999999999998 78777543211                     


Q ss_pred             HHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          203 VQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       203 ~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +.+.++     .+|+||.++|.+..+..  +.++++ ..++.+|..
T Consensus       195 l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~  232 (286)
T PRK14175        195 MASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT  232 (286)
T ss_pred             HHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence            222222     37999999998766555  357887 788888763

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.07  E-value=0.12  Score=41.20  Aligned_cols=78  Identities=21%  Similarity=0.241  Sum_probs=48.0

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC--hhhHH-H---HHhcCCceee---CCCCCCchHHHHHHhhh--cC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN--PSRFN-E---AKKFGVTEFV---NPKDYDKPVQQVIADMT--NG  213 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~--~~~~~-~---~~~lg~~~~~---~~~~~~~~~~~~~~~~~--~~  213 (329)
                      +++||+|+ +++|.+.++.+...|..+|+.+.++  .++.+ .   ++..+....+   |..+ .++....+++..  .+
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD-PESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS-HHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence            37899986 9999999998877777688888887  33333 2   2333432111   1111 122444444443  23


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      .+|++|.+.|.
T Consensus        80 ~ld~li~~ag~   90 (167)
T PF00106_consen   80 PLDILINNAGI   90 (167)
T ss_dssp             SESEEEEECSC
T ss_pred             ccccccccccc
Confidence            79999998884

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PLN02823 spermine synthase

Probab=95.07  E-value=0.25  Score=44.54  Aligned_cols=99  Identities=17%  Similarity=0.192  Sum_probs=61.8

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-c-eeeCCCCC---CchHHHHHHhhhcCCccEE
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV-T-EFVNPKDY---DKPVQQVIADMTNGGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~-~-~~~~~~~~---~~~~~~~~~~~~~~~~d~V  218 (329)
                      ..++|||.|+|. |..+..+++..+.+++++++.+++-.+.++++-. . ..+....-   ..+..+.+++ ..+.+|+|
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI  180 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI  180 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence            457899998763 6666778887777799999999999999887421 1 11110000   0123344433 33479998


Q ss_pred             E-Eec-----C------CHHHHH-HHHHhhccCCeEEEEe
Q 047713          219 V-ECT-----G------SVQAMI-SAFECVHDGWGVAVLV  245 (329)
Q Consensus       219 i-d~~-----g------~~~~~~-~~~~~l~~~~G~vv~~  245 (329)
                      | |..     |      +.+.++ .+.+.|+++ |.++.-
T Consensus       181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q  219 (336)
T PLN02823        181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ  219 (336)
T ss_pred             EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence            6 422     1      123455 678899998 987654

>PRK07985 oxidoreductase; Provisional

Probab=95.07  E-value=0.34  Score=42.90  Aligned_cols=79  Identities=20%  Similarity=0.220  Sum_probs=47.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC--hhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN--PSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~--~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .++++||+|+ +.+|.++++.+...|+ +|+.+..+  .++.+.+    ++.+...   ..|..+. ++..+.+.+... 
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDE-KFARSLVHEAHKA  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCH-HHHHHHHHHHHHH
Confidence            4679999987 9999999998888999 67776543  2222222    2333321   2233222 123344444332 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|+++.+.|.
T Consensus       126 ~g~id~lv~~Ag~  138 (294)
T PRK07985        126 LGGLDIMALVAGK  138 (294)
T ss_pred             hCCCCEEEECCCC
Confidence             368999988763

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.06  E-value=0.15  Score=44.02  Aligned_cols=79  Identities=20%  Similarity=0.220  Sum_probs=48.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH---HHHhcCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFN---EAKKFGVTE---FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~---~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      .++++||+|+ +.+|.++++.+...|+ +|+.+.++++..+   .+.+.+...   ..|..+.+ ...+.+.+...  ++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPE-SAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence            4789999987 9999999999988999 7777766632112   223334221   22332221 23333333322  36


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.06  E-value=0.083  Score=44.37  Aligned_cols=102  Identities=22%  Similarity=0.244  Sum_probs=62.9

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +....+++++.+||-.|+|. |..+..+++.. . +|++++.+++..+.+++    ++...+ .....+  ...   ...
T Consensus        70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~d--~~~---~~~  140 (212)
T PRK00312         70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHGD--GWK---GWP  140 (212)
T ss_pred             HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCce-EEEECC--ccc---CCC
Confidence            34567788999999998753 55555566654 3 79999999877665543    343221 111111  101   111


Q ss_pred             c-CCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          212 N-GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~-~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      . +.+|+|+-............+.|+++ |+++..-.
T Consensus       141 ~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~~  176 (212)
T PRK00312        141 AYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPVG  176 (212)
T ss_pred             cCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEEc
Confidence            1 36999886554555566778899998 98876543

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.05  E-value=0.72  Score=40.62  Aligned_cols=60  Identities=22%  Similarity=0.246  Sum_probs=45.1

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEc--CChhhHHHHHhcCCceeeCCC
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVD--LNPSRFNEAKKFGVTEFVNPK  197 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~--~~~~~~~~~~~lg~~~~~~~~  197 (329)
                      ....++||.+|+--=+|++|.+.+.+|+.+|++-+++..  .+.++.++++.+|+..+....
T Consensus        55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~  116 (300)
T COG0031          55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG  116 (300)
T ss_pred             HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence            455689998554433599999999999999995444443  267888999999997766554

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=95.05  E-value=0.37  Score=42.39  Aligned_cols=88  Identities=23%  Similarity=0.270  Sum_probs=55.1

Q ss_pred             eEEEEcCCHHHHHH-HHHHHHcCCCEEEEEcCChhh--HHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          147 SVAIFGLGAVGLAA-AEGARVSGASRIIGVDLNPSR--FNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       147 ~VlI~Gag~iG~aa-i~la~~~G~~~vv~~~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +|.|+|+|.+|... ..+.+..+.+.+-.++.++++  +++.+++|.......      +...+.   ...+|+||++++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~~------~e~ll~---~~dIDaV~iaTp   73 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAEG------VDGLLA---NPDIDIVFDATS   73 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEECC------HHHHhc---CCCCCEEEECCC
Confidence            57889999999855 556555566333334444443  466788886543321      222221   126999999998


Q ss_pred             CHHHHHHHHHhhccCCeEEEEe
Q 047713          224 SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       224 ~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      ...+.+.+..++..  |+.+..
T Consensus        74 ~~~H~e~a~~al~a--Gk~VId   93 (285)
T TIGR03215        74 AKAHARHARLLAEL--GKIVID   93 (285)
T ss_pred             cHHHHHHHHHHHHc--CCEEEE
Confidence            88777888777776  454444

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK07832 short chain dehydrogenase; Provisional

Probab=95.03  E-value=0.16  Score=44.35  Aligned_cols=76  Identities=24%  Similarity=0.365  Sum_probs=47.7

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce----eeCCCCCCchHHHHHHhhhc--CCc
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE----FVNPKDYDKPVQQVIADMTN--GGV  215 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~----~~~~~~~~~~~~~~~~~~~~--~~~  215 (329)
                      +++|+|+ |++|..+++.+...|+ +|+.+.+++++.+..    +..+...    ..|..+.+ ...+.+.+...  +++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD-AVAAFAADIHAAHGSM   79 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHH-HHHHHHHHHHHhcCCC
Confidence            6899986 9999999998888898 788887776654332    2333321    23333321 22232333222  369


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |++|++.|.
T Consensus        80 d~lv~~ag~   88 (272)
T PRK07832         80 DVVMNIAGI   88 (272)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.03  E-value=0.19  Score=43.37  Aligned_cols=78  Identities=21%  Similarity=0.357  Sum_probs=48.9

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc--e--eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVT--E--FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~--~--~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      ++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ +++...  .  ..|..+.+ ++...+.+...  +++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAA-SLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence            468999987 9999999998888898 788888877665433 333211  1  12222211 23333333322  3689


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|.+.|.
T Consensus        80 ~vi~~ag~   87 (257)
T PRK07074         80 VLVANAGA   87 (257)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK09242 tropinone reductase; Provisional

Probab=95.03  E-value=0.17  Score=43.71  Aligned_cols=79  Identities=20%  Similarity=0.268  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc-----CCce---eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF-----GVTE---FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l-----g~~~---~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+. ++     +...   ..|..+. ++....+.+... 
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDD-EDRRAILDWVEDH   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCH-HHHHHHHHHHHHH
Confidence            4789999986 9999999999988999 7888888776654332 22     2111   1233222 123333333322 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|+++.+.|.
T Consensus        86 ~g~id~li~~ag~   98 (257)
T PRK09242         86 WDGLHILVNNAGG   98 (257)
T ss_pred             cCCCCEEEECCCC
Confidence             379999999974

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.02  E-value=0.15  Score=44.66  Aligned_cols=79  Identities=19%  Similarity=0.270  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHH-HHhcCCce--eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNPS---RFNE-AKKFGVTE--FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~~---~~~~-~~~lg~~~--~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+   +++|++++..+...|+ +|+.+.++++   +.+. .++++...  ..|..+.+ +..+.+.+...  
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~i~~~~   81 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPE-HFKSLAESLKKDL   81 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHH-HHHHHHHHHHHHc
Confidence            3789999985   5899999998888999 7777777642   2222 23445322  23333322 23334444332  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +.+|+++++.|.
T Consensus        82 g~iDilVnnAG~   93 (274)
T PRK08415         82 GKIDFIVHSVAF   93 (274)
T ss_pred             CCCCEEEECCcc
Confidence            479999999884

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.00  E-value=0.37  Score=40.52  Aligned_cols=102  Identities=20%  Similarity=0.181  Sum_probs=62.3

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceeeC-------CCCCC-chHHHHHHhhh-
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFVN-------PKDYD-KPVQQVIADMT-  211 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~-------~~~~~-~~~~~~~~~~~-  211 (329)
                      +.++.+||+.|+|. |.-++.+|. .|. .|++++.++...+.+ ++.+......       +.... .-....+.++. 
T Consensus        32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  108 (213)
T TIGR03840        32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA  108 (213)
T ss_pred             CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence            35678999999874 888888886 688 899999999988764 3333211000       00000 00000111111 


Q ss_pred             --cCCccEEEEecCC--------HHHHHHHHHhhccCCeEEEEecc
Q 047713          212 --NGGVDRSVECTGS--------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 --~~~~d~Vid~~g~--------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                        .+.+|.|+|..-.        ...++...++|+++ |++.....
T Consensus       109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~  153 (213)
T TIGR03840       109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL  153 (213)
T ss_pred             ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence              1368999997521        23567888899998 98666654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.99  E-value=0.19  Score=42.84  Aligned_cols=79  Identities=20%  Similarity=0.234  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-e--eCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE-F--VNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      ++.++||+|+ |.+|..++..+...|. .|+...++.++.+.+ .+++... .  .|..+. +.+.+.+.+...  +++|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id   82 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDR-DEVKALGQKAEADLEGVD   82 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCC
Confidence            3679999986 9999999998888898 777777776665543 3344321 1  222221 123333333222  3699


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|.+.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12936         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.99  E-value=0.12  Score=51.20  Aligned_cols=77  Identities=23%  Similarity=0.291  Sum_probs=51.2

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHhcCCceeeCCCCCCc
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS---------------------RFNEAKKFGVTEFVNPKDYDK  201 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~  201 (329)
                      ..+++|+|+|+|+.|+.++..++..|. +|++++..+.                     ..+.++++|.+...+..-..+
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  403 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD  403 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence            358899999999999999999999999 7888876432                     345566777654433211100


Q ss_pred             hHHHHHHhhhcCCccEEEEecCC
Q 047713          202 PVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       202 ~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                       .  .+.++. .++|.||.++|.
T Consensus       404 -i--~~~~~~-~~~DavilAtGa  422 (654)
T PRK12769        404 -I--SLESLL-EDYDAVFVGVGT  422 (654)
T ss_pred             -C--CHHHHH-hcCCEEEEeCCC
Confidence             0  011111 258999998885

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=94.99  E-value=0.17  Score=43.44  Aligned_cols=76  Identities=17%  Similarity=0.292  Sum_probs=49.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCce---eeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTE---FVNPKDYDKPVQQVIADMTN--GGVDRSV  219 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d~Vi  219 (329)
                      +++|+|+ |.+|.+.+..+...|+ +|+.+++++++.+.+.. ++...   ..|..+. +++.+.+.+...  ++.|+++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~~~id~vi   79 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNR-AAIEEMLASLPAEWRNIDVLV   79 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            5889986 9999999999888899 78888888877655433 34321   1233222 123333333322  3699999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      .+.|.
T Consensus        80 ~~ag~   84 (248)
T PRK10538         80 NNAGL   84 (248)
T ss_pred             ECCCc
Confidence            88864

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.98  E-value=0.14  Score=44.64  Aligned_cols=79  Identities=24%  Similarity=0.291  Sum_probs=50.0

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh----HHHHHhcC-C-ceeeCCCCCC--chHHHHHHhhhcC
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR----FNEAKKFG-V-TEFVNPKDYD--KPVQQVIADMTNG  213 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~----~~~~~~lg-~-~~~~~~~~~~--~~~~~~~~~~~~~  213 (329)
                      -+|+.|||+|+ +++|.+.++=....|+ +++..+.+++.    .+.+++.| + ....|..+.+  ....+.+++.. |
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~-G  113 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV-G  113 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc-C
Confidence            46999999976 8999988887777888 77777765543    23344444 2 2344443322  11333344332 2


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      .+|++++.+|
T Consensus       114 ~V~ILVNNAG  123 (300)
T KOG1201|consen  114 DVDILVNNAG  123 (300)
T ss_pred             CceEEEeccc
Confidence            7999999988

>PRK01581 speE spermidine synthase; Validated

Probab=94.96  E-value=0.44  Score=43.26  Aligned_cols=102  Identities=17%  Similarity=0.083  Sum_probs=64.4

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-c----eeeCCCCC---CchHHHHHHhhhcC
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV-T----EFVNPKDY---DKPVQQVIADMTNG  213 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~-~----~~~~~~~~---~~~~~~~~~~~~~~  213 (329)
                      ....++|||.|+| .|.++..+++..+.++|++++.+++-.+.++++.. .    ..++...-   ..+..+.+++ ..+
T Consensus       148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~  225 (374)
T PRK01581        148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSS  225 (374)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCC
Confidence            3446799999865 56777888887666699999999999999886311 0    00000000   0113444443 234


Q ss_pred             CccEEEEecCC-----------HHHHHHHHHhhccCCeEEEEec
Q 047713          214 GVDRSVECTGS-----------VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       214 ~~d~Vid~~g~-----------~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .+|+||--...           .+.+..+.+.|+++ |.++.-.
T Consensus       226 ~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs  268 (374)
T PRK01581        226 LYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQS  268 (374)
T ss_pred             CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence            79998633211           23567888899998 9887664

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=94.96  E-value=0.59  Score=34.80  Aligned_cols=74  Identities=26%  Similarity=0.359  Sum_probs=52.5

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ  226 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~  226 (329)
                      |+|.|.|.+|..+++.++..+. +|+.++.++++.+.+++.|...+. -+..+   .+.++++.-..++.++-+++...
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~i~-gd~~~---~~~l~~a~i~~a~~vv~~~~~d~   74 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEVIY-GDATD---PEVLERAGIEKADAVVILTDDDE   74 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEEEE-S-TTS---HHHHHHTTGGCESEEEEESSSHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccccc-ccchh---hhHHhhcCccccCEEEEccCCHH
Confidence            5778999999999999998665 899999999999999988854333 22211   23445443347888888876543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK07577 short chain dehydrogenase; Provisional

Probab=94.96  E-value=0.13  Score=43.67  Aligned_cols=73  Identities=21%  Similarity=0.255  Sum_probs=47.4

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhcC-CccEEEEe
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTNG-GVDRSVEC  221 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~  221 (329)
                      ++++||+|+ |.+|..++..+...|. +|+.+.++.++     .+... ...|..+. .+..+.+.+.... +.|++|.+
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLADI-EQTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCCH-HHHHHHHHHHHHhCCCcEEEEC
Confidence            578999987 9999999998888898 78888776554     11111 12233222 1233444444333 68999998


Q ss_pred             cCC
Q 047713          222 TGS  224 (329)
Q Consensus       222 ~g~  224 (329)
                      .|.
T Consensus        76 ag~   78 (234)
T PRK07577         76 VGI   78 (234)
T ss_pred             CCC
Confidence            874

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.96  E-value=0.19  Score=43.48  Aligned_cols=79  Identities=18%  Similarity=0.281  Sum_probs=48.0

Q ss_pred             CCCeEEEEcCC---HHHHHHHHHHHHcCCCEEEEEcCChhhH---H-HHHhcCCceee--CCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGLG---AVGLAAAEGARVSGASRIIGVDLNPSRF---N-EAKKFGVTEFV--NPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Gag---~iG~aai~la~~~G~~~vv~~~~~~~~~---~-~~~~lg~~~~~--~~~~~~~~~~~~~~~~~~--  212 (329)
                      +|+++||+|++   ++|.++++.+...|+ +|+.+.++++..   + ..++++....+  |..+. ++..+.+.+...  
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREP-GQLEAVFARIAEEW   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCH-HHHHHHHHHHHHHc
Confidence            47899999863   899999998888998 777777665432   2 22334432222  22222 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +.+|+++++.|.
T Consensus        87 g~ld~lv~nAg~   98 (258)
T PRK07533         87 GRLDFLLHSIAF   98 (258)
T ss_pred             CCCCEEEEcCcc
Confidence            479999998873

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.94  E-value=0.15  Score=43.75  Aligned_cols=78  Identities=27%  Similarity=0.360  Sum_probs=49.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK---FGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++.++||+|+ |.+|...+..+...|. +|+.+++++++.+.. .+   .+...   ..|..+. .+..+.+.++..  +
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDE-EAINAGIDYAVETFG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            3679999986 9999999998888898 788888877665432 22   23221   2233221 123333333322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|+||.++|
T Consensus        81 ~~d~vi~~a~   90 (258)
T PRK12429         81 GVDILVNNAG   90 (258)
T ss_pred             CCCEEEECCC
Confidence            6899998886

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=94.93  E-value=0.31  Score=41.41  Aligned_cols=91  Identities=19%  Similarity=0.228  Sum_probs=58.3

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCC--EEEEEcCC----hhh--------HHHHHhcCCceeeCCCCCCchHHHHHH
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGAS--RIIGVDLN----PSR--------FNEAKKFGVTEFVNPKDYDKPVQQVIA  208 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~--~vv~~~~~----~~~--------~~~~~~lg~~~~~~~~~~~~~~~~~~~  208 (329)
                      -++.+++|+|+|..|.+++..+...|.+  +++.++++    .++        .+++++++... .   +.+  +.+.++
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~~~--l~~~l~   96 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---GGT--LKEALK   96 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---cCC--HHHHHh
Confidence            3578999999999999999998888997  79888887    333        33444443211 0   011  333332


Q ss_pred             hhhcCCccEEEEecCCHHHH-HHHHHhhccCCeEEEEec
Q 047713          209 DMTNGGVDRSVECTGSVQAM-ISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       209 ~~~~~~~d~Vid~~g~~~~~-~~~~~~l~~~~G~vv~~g  246 (329)
                           ++|++|++++. ..+ +..++.+.+. ..+..+.
T Consensus        97 -----~~dvlIgaT~~-G~~~~~~l~~m~~~-~ivf~ls  128 (226)
T cd05311          97 -----GADVFIGVSRP-GVVKKEMIKKMAKD-PIVFALA  128 (226)
T ss_pred             -----cCCEEEeCCCC-CCCCHHHHHhhCCC-CEEEEeC
Confidence                 38999999963 232 3555666665 5555444

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=94.93  E-value=0.41  Score=40.55  Aligned_cols=103  Identities=22%  Similarity=0.342  Sum_probs=59.7

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh------h-------------H----HHHHhcCCc-eeeCCCCCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS------R-------------F----NEAKKFGVT-EFVNPKDYD  200 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~------~-------------~----~~~~~lg~~-~~~~~~~~~  200 (329)
                      ...|+|.|.|++|..++..+...|..++..++-++=      |             -    ++.++.... ++...++. 
T Consensus        30 ~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f-  108 (263)
T COG1179          30 QAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF-  108 (263)
T ss_pred             hCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh-
Confidence            578999999999999999999899887777765441      1             1    111122211 11111111 


Q ss_pred             chHHHHHHhhhcCCccEEEEecCCHHHHHHHHH-hhccCCeEEEEeccCCC
Q 047713          201 KPVQQVIADMTNGGVDRSVECTGSVQAMISAFE-CVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       201 ~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~-~l~~~~G~vv~~g~~~~  250 (329)
                       -..+.+.++...++|+|+||.-.-..--..+. |.+.. =.++..+...+
T Consensus       109 -~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag~  157 (263)
T COG1179         109 -ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAGG  157 (263)
T ss_pred             -hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccccC
Confidence             12345566666689999999854333223333 44544 45666654433

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.90  E-value=0.17  Score=43.78  Aligned_cols=77  Identities=25%  Similarity=0.365  Sum_probs=49.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc----CCc-ee--eCCCCCCchHHHHHHhhhcCC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF----GVT-EF--VNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l----g~~-~~--~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      .+++++|+|+ +++|..+++.+...|+ +|+.+++++++.+.+. ++    +.. ..  .|..+. ++....++..  +.
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~--g~   81 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSP-EAREQLAAEA--GD   81 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCH-HHHHHHHHHh--CC
Confidence            3789999987 9999999998888899 8888888776654422 12    221 11  222221 1222222221  46


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|++.|.
T Consensus        82 id~lv~~ag~   91 (259)
T PRK06125         82 IDILVNNAGA   91 (259)
T ss_pred             CCEEEECCCC
Confidence            9999998873

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.90  E-value=0.2  Score=42.92  Aligned_cols=78  Identities=24%  Similarity=0.316  Sum_probs=49.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-ee--CCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE-FV--NPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~-~~--~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++.++||+|+ |.+|..++..+...|+ .|+.++++.++.+.+    ++.+... .+  |..+. ....+.+++...  +
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDR-DSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            3688999986 9999999998888898 788887776654433    2223211 11  22221 123333433322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|.+.|
T Consensus        80 ~~d~vi~~ag   89 (250)
T TIGR03206        80 PVDVLVNNAG   89 (250)
T ss_pred             CCCEEEECCC
Confidence            6899999887

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=94.89  E-value=0.17  Score=43.64  Aligned_cols=77  Identities=19%  Similarity=0.271  Sum_probs=47.9

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh----cCCc--eee--CCCCCCchHHHHHHhhhc--
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK----FGVT--EFV--NPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~----lg~~--~~~--~~~~~~~~~~~~~~~~~~--  212 (329)
                      ++++||+|+ |.+|.+++..+...|+ +|+.++++.++.+.+ .+    .+..  ..+  |..+. ++..+.+.++..  
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSE-QSVLALSRGVDEIF   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCH-HHHHHHHHHHHHHc
Confidence            468999986 9999999998888898 788888776654332 22    2211  111  22221 123333333322  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|+++++.|
T Consensus        80 ~~id~vv~~ag   90 (259)
T PRK12384         80 GRVDLLVYNAG   90 (259)
T ss_pred             CCCCEEEECCC
Confidence            37899999887

>PRK08264 short chain dehydrogenase; Validated

Probab=94.88  E-value=0.13  Score=43.67  Aligned_cols=75  Identities=21%  Similarity=0.290  Sum_probs=47.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-ee--eCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EF--VNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~--~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      .+.+++|+|+ |.+|..++..+...|.++|+.+.++.++.+.   .+.. ..  .|..+.+ ++.+.++..  +.+|+||
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~-~~~~~~~~~--~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPA-SVAAAAEAA--SDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHH-HHHHHHHhc--CCCCEEE
Confidence            4678999986 9999999998888898568888777665432   2221 11  1222211 122222221  2589999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      .+.|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            98876

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=94.86  E-value=0.26  Score=40.71  Aligned_cols=41  Identities=34%  Similarity=0.436  Sum_probs=33.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA  185 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~  185 (329)
                      ++.+++|+|+ |.+|..++..+...|. +|+.+.++.++.+.+
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l   68 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKA   68 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHH
Confidence            5789999986 9999998888888887 888888887766543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=94.86  E-value=0.37  Score=41.74  Aligned_cols=100  Identities=20%  Similarity=0.221  Sum_probs=65.4

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhc-C
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTN-G  213 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~-~  213 (329)
                      +.....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++.-.. ..+.   .+  .    .+... .
T Consensus        23 ll~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~---~d--~----~~~~~~~   92 (258)
T PRK01683         23 LLARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE---AD--I----ASWQPPQ   92 (258)
T ss_pred             HHhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE---Cc--h----hccCCCC
Confidence            34455667889999998763 67777888776444999999999988887764221 1111   11  1    11122 3


Q ss_pred             CccEEEEecC------CHHHHHHHHHhhccCCeEEEEec
Q 047713          214 GVDRSVECTG------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       214 ~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .+|+|+-...      ....+....+.|+++ |.++...
T Consensus        93 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~  130 (258)
T PRK01683         93 ALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM  130 (258)
T ss_pred             CccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence            7999875432      124577888899998 9887753

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.84  E-value=0.2  Score=43.62  Aligned_cols=78  Identities=15%  Similarity=0.265  Sum_probs=47.2

Q ss_pred             CCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCcee--eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEF--VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~--~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|+++||+|+ +  ++|.+++..+...|+ +|+.+.++++..+.++++    +....  .|..+. ++..+.+.+...  
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAED-ASIDAMFAELGKVW   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCH-HHHHHHHHHHHhhc
Confidence            4789999986 3  799999998888898 777776653222223322    22111  233222 224444444332  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +.+|++|++.|
T Consensus        83 g~iD~linnAg   93 (262)
T PRK07984         83 PKFDGFVHSIG   93 (262)
T ss_pred             CCCCEEEECCc
Confidence            36999999987

>CHL00194 ycf39 Ycf39; Provisional

Probab=94.83  E-value=0.2  Score=44.92  Aligned_cols=70  Identities=16%  Similarity=0.182  Sum_probs=47.1

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +|||+|+ |-+|..++..+...|. .|.+++++.++...+...+.+.+. |..+.     ..+.+.. .++|+||++++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~-----~~l~~al-~g~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSLP-----ETLPPSF-KGVTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCCH-----HHHHHHH-CCCCEEEECCC
Confidence            6899987 9999999998888898 788888877665555555554332 22221     1223322 25899998865

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.82  E-value=0.21  Score=42.52  Aligned_cols=78  Identities=22%  Similarity=0.360  Sum_probs=49.1

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +.+++|+|+ |.+|..++..+...|+ +|+.+++++++.+..    +..+...   ..|..+. .++.+.+++...  ++
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDY-EEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence            578999986 9999999998888899 888888877654432    2223211   1122221 123344443322  37


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|.+.|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            8999998864

>PRK05884 short chain dehydrogenase; Provisional

Probab=94.82  E-value=0.27  Score=41.53  Aligned_cols=74  Identities=20%  Similarity=0.258  Sum_probs=47.7

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +++|+|+ |.+|.++++.+...|+ +|+.+.+++++.+.+ ++++...+ .|..+.+ ++.+.+++.. +.+|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~-~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTDPA-SLEEARGLFP-HHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCCHH-HHHHHHHHHh-hcCcEEEECCC
Confidence            4889986 9999999998888898 788888887776543 44444322 2332221 2333333322 35899998765

>PRK06484 short chain dehydrogenase; Validated

Probab=94.78  E-value=0.19  Score=48.33  Aligned_cols=79  Identities=23%  Similarity=0.367  Sum_probs=53.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      +++++||+|+ +++|.++++.+...|+ +|+.++++.++.+. .++++...   ..|..+. .+..+.+.+...  +++|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDE-AQIREGFEQLHREFGRID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCH-HHHHHHHHHHHHHhCCCC
Confidence            5789999986 9999999999999999 88888887776554 45555432   2233322 124444444332  3799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|++.|.
T Consensus        82 ~li~nag~   89 (520)
T PRK06484         82 VLVNNAGV   89 (520)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK06720 hypothetical protein; Provisional

Probab=94.78  E-value=0.32  Score=39.28  Aligned_cols=38  Identities=21%  Similarity=0.218  Sum_probs=31.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRF  182 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~  182 (329)
                      ++..++|+|+ +++|.+.+..+...|+ +|+.++.+++..
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~   53 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESG   53 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence            4789999987 8999999998888898 788888776554

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=94.77  E-value=0.36  Score=41.15  Aligned_cols=35  Identities=37%  Similarity=0.535  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      ..+|+|.|.|++|..++..+...|..+++.++.+.
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            46899999999999999999889998888887653

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08618 ornithine cyclodeaminase; Validated

Probab=94.76  E-value=0.33  Score=43.72  Aligned_cols=94  Identities=15%  Similarity=0.127  Sum_probs=62.0

Q ss_pred             CCCCeEEEEcCCHHHHHHHHH-HHHcCCCEEEEEcCChhhHHH-HHhc----CCceeeCCCCCCchHHHHHHhhhcCCcc
Q 047713          143 KKGQSVAIFGLGAVGLAAAEG-ARVSGASRIIGVDLNPSRFNE-AKKF----GVTEFVNPKDYDKPVQQVIADMTNGGVD  216 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~l-a~~~G~~~vv~~~~~~~~~~~-~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~d  216 (329)
                      +..++++|+|+|..|.+.+.. +...+.++|...++++++.+. ++++    +... ....+    ..+.+     ...|
T Consensus       125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~~~----~~~~~-----~~aD  194 (325)
T PRK08618        125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVVNS----ADEAI-----EEAD  194 (325)
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEeCC----HHHHH-----hcCC
Confidence            456789999999999877754 446788889999998887654 3333    3321 11111    33333     2489


Q ss_pred             EEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          217 RSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       217 ~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +|+.++++...+ .. +.++++ -++..+|...
T Consensus       195 iVi~aT~s~~p~-i~-~~l~~G-~hV~~iGs~~  224 (325)
T PRK08618        195 IIVTVTNAKTPV-FS-EKLKKG-VHINAVGSFM  224 (325)
T ss_pred             EEEEccCCCCcc-hH-HhcCCC-cEEEecCCCC
Confidence            999999765432 33 778887 7888887643

>PRK08263 short chain dehydrogenase; Provisional

Probab=94.75  E-value=0.23  Score=43.42  Aligned_cols=78  Identities=19%  Similarity=0.248  Sum_probs=49.4

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCc-ee--eCCCCCCchHHHHHHhhhc--CCccE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVT-EF--VNPKDYDKPVQQVIADMTN--GGVDR  217 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~-~~--~~~~~~~~~~~~~~~~~~~--~~~d~  217 (329)
                      +.++||+|+ |.+|..+++.+...|. +|+.+++++++.+.+.+ ++.. ..  .|..+. .++.+.+.....  +++|+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDR-AAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            468999986 9999999998888898 78888888776654433 3221 11  122221 123333333221  36899


Q ss_pred             EEEecCC
Q 047713          218 SVECTGS  224 (329)
Q Consensus       218 Vid~~g~  224 (329)
                      +|.+.|.
T Consensus        81 vi~~ag~   87 (275)
T PRK08263         81 VVNNAGY   87 (275)
T ss_pred             EEECCCC
Confidence            9999874

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=94.74  E-value=0.26  Score=44.60  Aligned_cols=35  Identities=31%  Similarity=0.394  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      +.+|+|.|+|++|..++..+...|..++..++.+.
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            56899999999999999999999998888888764

>PRK12937 short chain dehydrogenase; Provisional

Probab=94.73  E-value=0.51  Score=40.17  Aligned_cols=79  Identities=16%  Similarity=0.187  Sum_probs=46.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHH----HHHhcCCce-e--eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN-PSRFN----EAKKFGVTE-F--VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~-~~~~~----~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--  212 (329)
                      ++.++||+|+ |.+|...+..+...|+ +++.+.++ +++.+    .+++.+... .  .|..+. ++..+.+++...  
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADA-AAVTRLFDAAETAF   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            4689999986 9999999999988998 56555443 32222    223333221 1  222221 123333333221  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (245)
T PRK12937         82 GRIDVLVNNAGV   93 (245)
T ss_pred             CCCCEEEECCCC
Confidence            368999998873

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.72  E-value=0.28  Score=41.50  Aligned_cols=94  Identities=23%  Similarity=0.324  Sum_probs=63.4

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee--CCCCCCchHHHHHHhhhc--CCccEE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV--NPKDYDKPVQQVIADMTN--GGVDRS  218 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~--~~~~~~~~~~~~~~~~~~--~~~d~V  218 (329)
                      -+|.+||=.|+|+ |+++.-+|+ .|+ .|++++.+++..+.++.-.....+  ++..      ..+.++..  +.||+|
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~------~~~edl~~~~~~FDvV  128 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ------ATVEDLASAGGQFDVV  128 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh------hhHHHHHhcCCCccEE
Confidence            4688999888854 676666666 567 999999999999988754333222  2322      23444443  389999


Q ss_pred             E-----EecCCHH-HHHHHHHhhccCCeEEEEec
Q 047713          219 V-----ECTGSVQ-AMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       219 i-----d~~g~~~-~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +     +-+..++ .+..+.++++|+ |.+....
T Consensus       129 ~cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST  161 (243)
T COG2227         129 TCMEVLEHVPDPESFLRACAKLVKPG-GILFLST  161 (243)
T ss_pred             EEhhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence            6     3444433 466788899998 8876653

>PLN03075 nicotianamine synthase; Provisional

Probab=94.72  E-value=0.36  Score=42.57  Aligned_cols=96  Identities=18%  Similarity=0.162  Sum_probs=64.9

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCC-----ceeeCCCCCCchHHHHHHhhh--cCCc
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAKKFGV-----TEFVNPKDYDKPVQQVIADMT--NGGV  215 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~~lg~-----~~~~~~~~~~~~~~~~~~~~~--~~~~  215 (329)
                      ++++|+-+|+|+.++.++.+++.+ ...++++++.+++..+.++++-.     ..-+.....+  ..+    ..  .++|
T Consensus       123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D--a~~----~~~~l~~F  196 (296)
T PLN03075        123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTAD--VMD----VTESLKEY  196 (296)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECc--hhh----cccccCCc
Confidence            778999999999999888888644 33389999999998888876431     1222222222  211    22  2479


Q ss_pred             cEEEEec-------CCHHHHHHHHHhhccCCeEEEEec
Q 047713          216 DRSVECT-------GSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       216 d~Vid~~-------g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+||-.+       .....++...+.|+++ |.++.-.
T Consensus       197 DlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~  233 (296)
T PLN03075        197 DVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS  233 (296)
T ss_pred             CEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence            9998654       2345678888899997 8777654

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=94.72  E-value=0.15  Score=44.78  Aligned_cols=98  Identities=19%  Similarity=0.157  Sum_probs=66.7

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      +.++ .|.|+|.|.+|.-++.+|.-+|+ +|...+.+.+|+..+..+-...+-........+...++     +.|++|.+
T Consensus       166 V~~~-kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIga  238 (371)
T COG0686         166 VLPA-KVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGA  238 (371)
T ss_pred             CCCc-cEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEE
Confidence            3444 56677999999999999999999 89999999999888876433332222221111333322     47888876


Q ss_pred             cCC-----H-HHHHHHHHhhccCCeEEEEecc
Q 047713          222 TGS-----V-QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       222 ~g~-----~-~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +=.     + -..+..++.++++ +.++.+..
T Consensus       239 VLIpgakaPkLvt~e~vk~MkpG-sVivDVAi  269 (371)
T COG0686         239 VLIPGAKAPKLVTREMVKQMKPG-SVIVDVAI  269 (371)
T ss_pred             EEecCCCCceehhHHHHHhcCCC-cEEEEEEE
Confidence            531     1 1356778899998 88888864

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=94.69  E-value=0.21  Score=42.66  Aligned_cols=79  Identities=19%  Similarity=0.294  Sum_probs=46.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChh-hHHHH---HhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPS-RFNEA---KKFGVTEF---VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~-~~~~~---~~lg~~~~---~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +++++||+|+ |.+|..++..+...|+ .|+.. ..++. ..+.+   ++.+....   .|..+.+ +..+.+.+...  
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   79 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWD-STKAAFDKVKAEV   79 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHh
Confidence            3678999986 9999999999988998 56553 33332 22223   33343322   2332221 23333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus        80 ~~id~li~~ag~   91 (246)
T PRK12938         80 GEIDVLVNNAGI   91 (246)
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>PRK12367 short chain dehydrogenase; Provisional

Probab=94.69  E-value=0.25  Score=42.48  Aligned_cols=72  Identities=21%  Similarity=0.285  Sum_probs=44.8

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHHHhcCCce--eeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP-SRFNEAKKFGVTE--FVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~-~~~~~~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      +++++|+|+ |++|.++++.+...|+ +|+.+++++ +..+... .+...  ..|..+    .. .+.+.. +++|++|+
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~----~~-~~~~~~-~~iDilVn   85 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECGK----EE-SLDKQL-ASLDVLIL   85 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCCC----HH-HHHHhc-CCCCEEEE
Confidence            689999986 9999999998888998 788777765 2222211 11111  122222    11 222222 36999999


Q ss_pred             ecCC
Q 047713          221 CTGS  224 (329)
Q Consensus       221 ~~g~  224 (329)
                      ++|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            9874

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=94.69  E-value=0.22  Score=42.50  Aligned_cols=79  Identities=23%  Similarity=0.289  Sum_probs=48.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE-F--VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .+.++||+|+ |.+|...+..+...|. +|+.++++.++...    +++.+... .  .|..+. .++.+.+.+...  +
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   82 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDR-AALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhC
Confidence            3678999986 9999999998888898 78888887554332    23233211 1  122221 123333333322  2


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      .+|+||.+.|.
T Consensus        83 ~~d~vi~~ag~   93 (251)
T PRK12826         83 RLDILVANAGI   93 (251)
T ss_pred             CCCEEEECCCC
Confidence            68999988764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.69  E-value=0.24  Score=42.93  Aligned_cols=79  Identities=25%  Similarity=0.391  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++.+++|+|+ +.+|.+++..+...|+ +|+.+.+++++.+.    +++.+...   ..|..+. .+..+.+.+...  +
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   86 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDE-DGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHhCC
Confidence            4789999986 9999999988888899 67777777765543    22334321   1233222 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|.+.|.
T Consensus        87 ~id~li~~ag~   97 (265)
T PRK07097         87 VIDILVNNAGI   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=94.69  E-value=0.24  Score=43.87  Aligned_cols=36  Identities=22%  Similarity=0.409  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .+++++|+|+|++|.+++..+...|+++|+.+.++.
T Consensus       125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            478999999999999999888889997688888875

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=94.67  E-value=0.22  Score=42.68  Aligned_cols=77  Identities=26%  Similarity=0.383  Sum_probs=48.4

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTE---FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~---~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +.++||+|+ |.+|...+..+...|. +|+.+++++++.+.+.+    .+...   ..|..+. +++.+.+.+...  ++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKE-DEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHhcCC
Confidence            357999987 9999999998888899 78888887766554432    22211   1233221 123333333321  36


Q ss_pred             ccEEEEecC
Q 047713          215 VDRSVECTG  223 (329)
Q Consensus       215 ~d~Vid~~g  223 (329)
                      +|+||.+.|
T Consensus        79 ~d~vi~~a~   87 (255)
T TIGR01963        79 LDILVNNAG   87 (255)
T ss_pred             CCEEEECCC
Confidence            899988776

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.65  E-value=0.29  Score=41.98  Aligned_cols=35  Identities=29%  Similarity=0.481  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      +.+|+|.|+|++|..+++.+...|.++++.++.+.
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            47899999999999999999999998888877644

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=94.63  E-value=0.39  Score=37.49  Aligned_cols=32  Identities=31%  Similarity=0.494  Sum_probs=28.2

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      +|+|.|+|++|..++..+...|.+++..++.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            47899999999999999999999888888765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06484 short chain dehydrogenase; Validated

Probab=94.63  E-value=0.22  Score=47.90  Aligned_cols=80  Identities=23%  Similarity=0.302  Sum_probs=54.0

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCce---eeCCCCCCchHHHHHHhhhc--CCc
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVTE---FVNPKDYDKPVQQVIADMTN--GGV  215 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~  215 (329)
                      ..|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. +++...   ..|..+.+ +..+.+.+...  +.+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA-AVESAFAQIQARWGRL  344 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHH-HHHHHHHHHHHHcCCC
Confidence            45789999986 9999999998888998 8888888877766544 344322   22333322 23333443332  369


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |++|++.|.
T Consensus       345 d~li~nAg~  353 (520)
T PRK06484        345 DVLVNNAGI  353 (520)
T ss_pred             CEEEECCCC
Confidence            999998874

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=94.62  E-value=0.35  Score=45.38  Aligned_cols=105  Identities=15%  Similarity=0.280  Sum_probs=62.8

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhh-hc
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADM-TN  212 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~-~~  212 (329)
                      ....+++|++||=.|+|+ |..++.+++.++..+|++++.++++.+.++    ++|....+.....+  ... .... ..
T Consensus       232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d--~~~-~~~~~~~  307 (426)
T TIGR00563       232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGD--GRG-PSQWAEN  307 (426)
T ss_pred             HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccc--ccc-ccccccc
Confidence            345678899999887643 444555555554338999999999877653    45654211001111  000 0000 12


Q ss_pred             CCccEEE-E--ecCC-------------------------HHHHHHHHHhhccCCeEEEEecc
Q 047713          213 GGVDRSV-E--CTGS-------------------------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       213 ~~~d~Vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +.+|.|| |  |+|.                         ...+..++++|+++ |+++....
T Consensus       308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc  369 (426)
T TIGR00563       308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC  369 (426)
T ss_pred             cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            3699987 3  4442                         23567788899998 99987754

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=94.60  E-value=0.25  Score=39.01  Aligned_cols=74  Identities=24%  Similarity=0.291  Sum_probs=48.8

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce-eeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE-FVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      .++.+++|+|+|.+|...++.+...|...|..++++.++.+. .++++... .....+    ..+.     -+++|+|+.
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD----LEEL-----LAEADLIIN   87 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc----hhhc-----cccCCEEEe
Confidence            457889999999999999998887764478888888776554 55555421 001111    1111     136899999


Q ss_pred             ecCCH
Q 047713          221 CTGSV  225 (329)
Q Consensus       221 ~~g~~  225 (329)
                      +++..
T Consensus        88 ~~~~~   92 (155)
T cd01065          88 TTPVG   92 (155)
T ss_pred             CcCCC
Confidence            98653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=94.60  E-value=0.41  Score=38.36  Aligned_cols=87  Identities=16%  Similarity=0.247  Sum_probs=57.5

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ  226 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~  226 (329)
                      +|-++|.|.+|...+.-+...|. .|.+.++++++.+.+.+.|+...-+       ..+.+++     .|+||-++...+
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~~s-------~~e~~~~-----~dvvi~~v~~~~   69 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVADS-------PAEAAEQ-----ADVVILCVPDDD   69 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEESS-------HHHHHHH-----BSEEEE-SSSHH
T ss_pred             EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhhhh-------hhhHhhc-----ccceEeecccch
Confidence            67888999999999998888899 8999999999998888877543321       3333332     589998887655


Q ss_pred             HHHHHHH------hhccCCeEEEEecc
Q 047713          227 AMISAFE------CVHDGWGVAVLVGV  247 (329)
Q Consensus       227 ~~~~~~~------~l~~~~G~vv~~g~  247 (329)
                      .....+.      .+.++ ..++.++.
T Consensus        70 ~v~~v~~~~~i~~~l~~g-~iiid~sT   95 (163)
T PF03446_consen   70 AVEAVLFGENILAGLRPG-KIIIDMST   95 (163)
T ss_dssp             HHHHHHHCTTHGGGS-TT-EEEEE-SS
T ss_pred             hhhhhhhhhHHhhccccc-eEEEecCC
Confidence            5554433      24444 55665554

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=94.59  E-value=0.25  Score=42.54  Aligned_cols=79  Identities=20%  Similarity=0.268  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .+.++||+|+ +.+|..++..+...|+ +++.+++++++.+.+    ++.+...   ..|..+.+ +..+.+.....  +
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ-ELSALADFALSKLG   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            3789999986 9999999998888899 677777766654432    2223221   22333221 23333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+++.+.|.
T Consensus        88 ~~d~li~~ag~   98 (255)
T PRK06113         88 KVDILVNNAGG   98 (255)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.58  E-value=0.2  Score=46.12  Aligned_cols=73  Identities=22%  Similarity=0.309  Sum_probs=53.7

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      .+.++||+|+|-+|..++.-+...|..+++.+.++.++.. +++++|+..+ ..++    ....+.     .+|+||-++
T Consensus       177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~e----l~~~l~-----~~DvVissT  246 (414)
T COG0373         177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALEE----LLEALA-----EADVVISST  246 (414)
T ss_pred             ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHHH----HHHhhh-----hCCEEEEec
Confidence            5889999999999999999999999878888877777654 5788984322 1111    222221     489999999


Q ss_pred             CCHH
Q 047713          223 GSVQ  226 (329)
Q Consensus       223 g~~~  226 (329)
                      +++.
T Consensus       247 sa~~  250 (414)
T COG0373         247 SAPH  250 (414)
T ss_pred             CCCc
Confidence            8654

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=94.57  E-value=0.71  Score=39.94  Aligned_cols=97  Identities=21%  Similarity=0.205  Sum_probs=66.2

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc-C
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN-G  213 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~  213 (329)
                      +.......++.+||=.|+|. |..+..+++.. +. +|++++.++...+.+++.+.+...    .+  .    .++.. +
T Consensus        21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~----~d--~----~~~~~~~   88 (255)
T PRK14103         21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART----GD--V----RDWKPKP   88 (255)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE----cC--h----hhCCCCC
Confidence            34556667889999988764 77777888765 45 899999999988888775543221    11  2    12222 3


Q ss_pred             CccEEEEecC------CHHHHHHHHHhhccCCeEEEEe
Q 047713          214 GVDRSVECTG------SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       214 ~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      .+|+|+-...      ....+....+.|+++ |.++..
T Consensus        89 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~  125 (255)
T PRK14103         89 DTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ  125 (255)
T ss_pred             CceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence            7999985432      134567788889998 998765

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.56  E-value=0.13  Score=39.23  Aligned_cols=95  Identities=24%  Similarity=0.341  Sum_probs=51.3

Q ss_pred             eEEEEcC-CHHHHHHHHHHHH-cCCCEEEEEcCChh---hHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          147 SVAIFGL-GAVGLAAAEGARV-SGASRIIGVDLNPS---RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~-~G~~~vv~~~~~~~---~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      +|+|+|+ |-+|.++++.+.. .+.+-+-++++.++   ..+.-.-.|....-..      ....+.++... .|++||+
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~------v~~~l~~~~~~-~DVvIDf   74 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVP------VTDDLEELLEE-ADVVIDF   74 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSB------EBS-HHHHTTH--SEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccc------cchhHHHhccc-CCEEEEc
Confidence            5889998 9999999999887 67744555555541   1111111221100000      00112332222 8999999


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          222 TGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      + .++.....++.+... |.-+.+|.+..
T Consensus        75 T-~p~~~~~~~~~~~~~-g~~~ViGTTG~  101 (124)
T PF01113_consen   75 T-NPDAVYDNLEYALKH-GVPLVIGTTGF  101 (124)
T ss_dssp             S--HHHHHHHHHHHHHH-T-EEEEE-SSS
T ss_pred             C-ChHHhHHHHHHHHhC-CCCEEEECCCC
Confidence            9 566666666655554 77777776543

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR00417 speE spermidine synthase

Probab=94.52  E-value=0.47  Score=41.52  Aligned_cols=101  Identities=15%  Similarity=0.112  Sum_probs=60.6

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-C-ceeeCCCCC---CchHHHHHHhhhcCCccE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG-V-TEFVNPKDY---DKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg-~-~~~~~~~~~---~~~~~~~~~~~~~~~~d~  217 (329)
                      ...++||+.|+|. |..+..+++....+++++++.+++-.+.++++- . ...++...-   ..+..+.+++. .+.+|+
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~-~~~yDv  148 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADT-ENTFDV  148 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhC-CCCccE
Confidence            3456999998764 545666677665668999999988777776631 1 001110000   01133333332 347999


Q ss_pred             EEEecC----------CHHHHHHHHHhhccCCeEEEEec
Q 047713          218 SVECTG----------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       218 Vid~~g----------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+-...          ..+.++.+.+.|+++ |.++...
T Consensus       149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~  186 (270)
T TIGR00417       149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS  186 (270)
T ss_pred             EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence            874221          234567888899998 9988763

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK12743 oxidoreductase; Provisional

Probab=94.50  E-value=0.26  Score=42.53  Aligned_cols=78  Identities=19%  Similarity=0.187  Sum_probs=46.9

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHH----HHHhcCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD-LNPSRFN----EAKKFGVTE-F--VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~-~~~~~~~----~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++++||+|+ +.+|..+++.+...|+ +|+.+. ++.++.+    .++..+... .  .|..+. .+..+.+.++..  +
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDL-PEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            568999986 9999999999988999 666653 4444332    233345322 1  233222 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|.+.|.
T Consensus        80 ~id~li~~ag~   90 (256)
T PRK12743         80 RIDVLVNNAGA   90 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999988873

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.49  E-value=0.35  Score=42.30  Aligned_cols=79  Identities=20%  Similarity=0.311  Sum_probs=48.4

Q ss_pred             CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHH-HHhcCCcee--eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNPS---RFNE-AKKFGVTEF--VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~~---~~~~-~~~lg~~~~--~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+   +++|.+++..+...|+ +|+.+.++++   +.+. .++++....  .|..+. ++..+.+.++..  
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   86 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDE-ASIDAVFETLEKKW   86 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCH-HHHHHHHHHHHHhc
Confidence            5789999975   5899999998888999 7777665532   2222 234453222  233222 223334444332  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +.+|+++++.|.
T Consensus        87 g~iD~lv~nAG~   98 (272)
T PRK08159         87 GKLDFVVHAIGF   98 (272)
T ss_pred             CCCcEEEECCcc
Confidence            379999998873

>TIGR00477 tehB tellurite resistance protein TehB

Probab=94.49  E-value=0.22  Score=41.27  Aligned_cols=99  Identities=16%  Similarity=0.202  Sum_probs=58.7

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhc
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .......++.+||-.|+| .|..++.+++ .|. +|++++.++...+.+++.    +..  +.....+  ...  ... .
T Consensus        23 ~~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~d--~~~--~~~-~   92 (195)
T TIGR00477        23 REAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDAYD--INA--AAL-N   92 (195)
T ss_pred             HHHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEecc--chh--ccc-c
Confidence            344444556788888875 3777777776 476 899999999877765442    222  1110001  100  011 2


Q ss_pred             CCccEEEEecC--------CHHHHHHHHHhhccCCeEEEEec
Q 047713          213 GGVDRSVECTG--------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       213 ~~~d~Vid~~g--------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +.+|+|+...-        ....+....+.|+++ |.++.+.
T Consensus        93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~  133 (195)
T TIGR00477        93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA  133 (195)
T ss_pred             CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence            36999875421        124567777889998 9865554

Part of a tellurite-reducing operon tehA and tehB

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.47  E-value=0.37  Score=41.51  Aligned_cols=34  Identities=29%  Similarity=0.492  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      ..+|+|.|+|++|..++..+...|.+++..++.+
T Consensus        32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            5789999999999999999999999888887664

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=94.44  E-value=0.52  Score=41.31  Aligned_cols=128  Identities=16%  Similarity=0.151  Sum_probs=83.2

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCC---------chHHHHHHhhhc
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYD---------KPVQQVIADMTN  212 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~---------~~~~~~~~~~~~  212 (329)
                      -.++..+++.|.|.+|++++..++..|+ .|...+....+.+..+++|+...-...++.         ++|...-.++..
T Consensus       161 tv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a  239 (356)
T COG3288         161 TVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVA  239 (356)
T ss_pred             cccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHH
Confidence            3466788999999999999999999999 888888888888888888875432222111         223333233332


Q ss_pred             C---CccEEEEecCCH-----H-HHHHHHHhhccCCeEEEEeccCCC-CCccc-cccccccccceEEEee
Q 047713          213 G---GVDRSVECTGSV-----Q-AMISAFECVHDGWGVAVLVGVPNK-DDAFK-THPMNLLNERTLKGTF  271 (329)
Q Consensus       213 ~---~~d~Vid~~g~~-----~-~~~~~~~~l~~~~G~vv~~g~~~~-~~~~~-~~~~~~~~~~~~~g~~  271 (329)
                      +   ++|+||-+.-.|     . ......+.++++ ..++.+....+ +.... .......+.++++|..
T Consensus       240 ~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~  308 (356)
T COG3288         240 EQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT  308 (356)
T ss_pred             HHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence            2   799999876321     1 245677789998 89998865333 22111 1222234678888754

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=94.41  E-value=0.31  Score=44.18  Aligned_cols=34  Identities=35%  Similarity=0.448  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      ..+|+|.|+|++|..+++.+...|..++..++.+
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            5689999999999999999999999889999875

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.37  E-value=0.4  Score=40.79  Aligned_cols=34  Identities=29%  Similarity=0.377  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      ..+|+|.|+|++|..++..+...|..++..++.+
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            5789999999999999999999999888887654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=94.37  E-value=0.21  Score=41.05  Aligned_cols=100  Identities=17%  Similarity=0.190  Sum_probs=62.1

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhc
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      +....+.++.+||=.|+|. |..++.+++.....+|++++.+++..+.+++    ++...+- ....+  ..    ....
T Consensus        24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~-~~~~d--~~----~~~~   95 (187)
T PRK08287         24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNID-IIPGE--AP----IELP   95 (187)
T ss_pred             HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeE-EEecC--ch----hhcC
Confidence            3455677889999888754 6667777776543489999999987776653    3332211 11111  11    1112


Q ss_pred             CCccEEEEecC---CHHHHHHHHHhhccCCeEEEEe
Q 047713          213 GGVDRSVECTG---SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       213 ~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      +.+|+|+....   ....+..+.+.|+++ |+++..
T Consensus        96 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~  130 (187)
T PRK08287         96 GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT  130 (187)
T ss_pred             cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence            36999985321   234567788899998 988764

>PRK07574 formate dehydrogenase; Provisional

Probab=94.36  E-value=0.49  Score=43.57  Aligned_cols=45  Identities=22%  Similarity=0.333  Sum_probs=35.5

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG  189 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg  189 (329)
                      .|.+|.|+|.|.||+.+++.++.+|. +|++.+++....+..+.++
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g  235 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG  235 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence            57899999999999999999999999 8999887653333333344

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.34  E-value=0.34  Score=43.19  Aligned_cols=78  Identities=17%  Similarity=0.193  Sum_probs=48.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh----------hhHH----HHHhcCCce---eeCCCCCCchHHH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP----------SRFN----EAKKFGVTE---FVNPKDYDKPVQQ  205 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~----------~~~~----~~~~lg~~~---~~~~~~~~~~~~~  205 (329)
                      .|+++||+|+ +++|.++++.+...|+ +|+.++++.          ++.+    .++..+...   ..|..+. ++..+
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~-~~v~~   84 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVP-EQVRA   84 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCH-HHHHH
Confidence            4789999986 9999999999988999 777777652          2222    233334321   1233222 12444


Q ss_pred             HHHhhhc--CCccEEEEec-C
Q 047713          206 VIADMTN--GGVDRSVECT-G  223 (329)
Q Consensus       206 ~~~~~~~--~~~d~Vid~~-g  223 (329)
                      .+.+...  +.+|++|++. |
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHHHcCCccEEEECCcc
Confidence            4444332  3699999887 5

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.33  E-value=0.16  Score=39.27  Aligned_cols=35  Identities=34%  Similarity=0.423  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      ..+|+|.|+|++|..++..+...|..++..++.+.
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~   36 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDI   36 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence            46899999999999999999888998888887643

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.32  E-value=0.26  Score=42.67  Aligned_cols=78  Identities=13%  Similarity=0.285  Sum_probs=47.1

Q ss_pred             CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHH-HHhc-CCc---eeeCCCCCCchHHHHHHhhhc
Q 047713          144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNP---SRFNE-AKKF-GVT---EFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~---~~~~~-~~~l-g~~---~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .|++++|+|+   +++|.+++..+...|+ +|+.+.++.   ++.+. .+++ +..   ...|..+. ++..+.+++...
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~   83 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSD-EEITACFETIKE   83 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCH-HHHHHHHHHHHH
Confidence            4789999985   5999999998888999 777775432   23332 2333 211   12233332 224444444332


Q ss_pred             --CCccEEEEecC
Q 047713          213 --GGVDRSVECTG  223 (329)
Q Consensus       213 --~~~d~Vid~~g  223 (329)
                        +++|+++++.|
T Consensus        84 ~~g~ld~lv~nag   96 (257)
T PRK08594         84 EVGVIHGVAHCIA   96 (257)
T ss_pred             hCCCccEEEECcc
Confidence              47999998876

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.30  E-value=0.29  Score=41.93  Aligned_cols=79  Identities=20%  Similarity=0.255  Sum_probs=47.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHH----HHHhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIG-VDLNPSRFN----EAKKFGVTEF---VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~-~~~~~~~~~----~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--  212 (329)
                      ++.++||+|+ |.+|..++..+...|+ +|+. ..++.++.+    .+++.+....   .|..+. .+..+.+.+...  
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   80 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDV-EKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            3678999986 9999999999988998 5554 455554432    2233343221   222222 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|.+.|.
T Consensus        81 ~~id~vi~~ag~   92 (250)
T PRK08063         81 GRLDVFVNNAAS   92 (250)
T ss_pred             CCCCEEEECCCC
Confidence            368999998873

>PRK06523 short chain dehydrogenase; Provisional

Probab=94.29  E-value=0.21  Score=43.11  Aligned_cols=75  Identities=21%  Similarity=0.236  Sum_probs=46.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTN--GGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~--~~~d~Vi  219 (329)
                      +|+++||+|+ |.+|..+++.+...|+ +|+.++++++...   .-... ...|..+.+ +..+.+.++..  +++|++|
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~vi   82 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTTAE-GCAAVARAVLERLGGVDILV   82 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            4789999986 9999999998888899 7888877654321   00111 112332221 23333333222  3689999


Q ss_pred             EecC
Q 047713          220 ECTG  223 (329)
Q Consensus       220 d~~g  223 (329)
                      ++.|
T Consensus        83 ~~ag   86 (260)
T PRK06523         83 HVLG   86 (260)
T ss_pred             ECCc
Confidence            9887

>PRK07791 short chain dehydrogenase; Provisional

Probab=94.28  E-value=0.4  Score=42.26  Aligned_cols=80  Identities=25%  Similarity=0.354  Sum_probs=48.2

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh---------hhHH-HHH---hcCCcee---eCCCCCCchHHH
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP---------SRFN-EAK---KFGVTEF---VNPKDYDKPVQQ  205 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~---------~~~~-~~~---~lg~~~~---~~~~~~~~~~~~  205 (329)
                      -+++++||+|+ +++|.+++..+...|+ +|+.++.+.         ++.+ ..+   +.+....   .|..+.+ +..+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~-~v~~   81 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWD-GAAN   81 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHH-HHHH
Confidence            35789999986 9999999998888898 677765543         2222 222   2333221   2332221 2333


Q ss_pred             HHHhhhc--CCccEEEEecCC
Q 047713          206 VIADMTN--GGVDRSVECTGS  224 (329)
Q Consensus       206 ~~~~~~~--~~~d~Vid~~g~  224 (329)
                      .+++...  +.+|++|++.|.
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence            3443322  479999998874

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=94.27  E-value=0.13  Score=42.11  Aligned_cols=92  Identities=14%  Similarity=0.161  Sum_probs=56.2

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhh-cCCccEEE
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMT-NGGVDRSV  219 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~d~Vi  219 (329)
                      +++||-.|+|. |..++.+++.....+|++++.+++..+.++    +.+.+.+ .....+  ..    ++. .+.+|+|+
T Consensus        43 ~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~d--~~----~~~~~~~fD~I~  114 (181)
T TIGR00138        43 GKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNGR--AE----DFQHEEQFDVIT  114 (181)
T ss_pred             CCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEecc--hh----hccccCCccEEE
Confidence            78899888753 566666666554348999999998766554    3443321 111111  21    122 23799987


Q ss_pred             Eec-C-CHHHHHHHHHhhccCCeEEEEe
Q 047713          220 ECT-G-SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       220 d~~-g-~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      -.. . ....++.+.++|+++ |.++..
T Consensus       115 s~~~~~~~~~~~~~~~~Lkpg-G~lvi~  141 (181)
T TIGR00138       115 SRALASLNVLLELTLNLLKVG-GYFLAY  141 (181)
T ss_pred             ehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence            432 1 234556777889998 998866

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.27  E-value=0.33  Score=40.93  Aligned_cols=46  Identities=30%  Similarity=0.388  Sum_probs=36.6

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh----------hhHHHHHhcC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP----------SRFNEAKKFG  189 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~----------~~~~~~~~lg  189 (329)
                      .|.+|+|.|.|.+|+.+++.+...|.+.|.+++.+.          +..+..++.+
T Consensus        22 ~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~   77 (217)
T cd05211          22 EGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG   77 (217)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence            588999999999999999999999985566666666          5566555554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=94.24  E-value=0.42  Score=40.19  Aligned_cols=34  Identities=29%  Similarity=0.369  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      ..+|+|.|+|++|..+++.+...|..++..++.+
T Consensus        28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            5689999999999999999999999888888876

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.24  E-value=0.62  Score=45.36  Aligned_cols=74  Identities=12%  Similarity=0.208  Sum_probs=55.6

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +.++|.|.|.+|+.+++.++..|. .|++++.++++.+.+++.|...+.-...+    .+.+++..-+.+|.++-+++.
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~~----~~~L~~a~i~~a~~viv~~~~  491 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAAN----EEIMQLAHLDCARWLLLTIPN  491 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCCC----HHHHHhcCccccCEEEEEcCC
Confidence            678999999999999999999998 89999999999999998886555432221    223444322378888777654

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=94.20  E-value=0.28  Score=41.71  Aligned_cols=105  Identities=16%  Similarity=0.222  Sum_probs=64.1

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      +.....++++++||-.|+|. |..+..+++..+. .+|++++.+++..+.+++.    +.+.+- ....+  ... + ..
T Consensus        37 ~l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~-~-~~  110 (231)
T TIGR02752        37 TMKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVE-LVHGN--AME-L-PF  110 (231)
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceE-EEEec--hhc-C-CC
Confidence            34556778899999988763 6677778876542 3899999998877766542    221110 00001  110 0 11


Q ss_pred             hcCCccEEEEecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          211 TNGGVDRSVECTG------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       211 ~~~~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ..+.+|+|+-...      ....+..+.+.|+++ |.++....
T Consensus       111 ~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  152 (231)
T TIGR02752       111 DDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET  152 (231)
T ss_pred             CCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence            1237999874322      123567788899998 99987654

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=94.17  E-value=0.37  Score=42.18  Aligned_cols=92  Identities=20%  Similarity=0.188  Sum_probs=56.2

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC---ceeeCCCCCCchHHHHHHhhhcCCccEE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV---TEFVNPKDYDKPVQQVIADMTNGGVDRS  218 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~---~~~~~~~~~~~~~~~~~~~~~~~~~d~V  218 (329)
                      .++++++|+|+|++|.+++..+...|. +|..+.+++++.+. ++++..   .....       ..    +.....+|+|
T Consensus       115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~-------~~----~~~~~~~Div  182 (270)
T TIGR00507       115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS-------MD----ELPLHRVDLI  182 (270)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec-------hh----hhcccCccEE
Confidence            457899999999999999988888897 88888888776543 344322   11111       11    1111258999


Q ss_pred             EEecCCH--HHH---HHHHHhhccCCeEEEEecc
Q 047713          219 VECTGSV--QAM---ISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       219 id~~g~~--~~~---~~~~~~l~~~~G~vv~~g~  247 (329)
                      |++++..  ...   ......++++ ..++.+..
T Consensus       183 Inatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y  215 (270)
T TIGR00507       183 INATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY  215 (270)
T ss_pred             EECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence            9998752  111   1113345655 56666644

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=94.15  E-value=0.35  Score=41.85  Aligned_cols=78  Identities=21%  Similarity=0.224  Sum_probs=47.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHHH-HHh----cCCc-e--eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD-LNPSRFNE-AKK----FGVT-E--FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~-~~~~~~~~-~~~----lg~~-~--~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      +++++||+|+ +++|.+++..+...|+ +|+.+. +++++.+. .++    .+.. .  ..|..+. ++..+.+.+... 
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~   84 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEP-ETYKELFKKIDED   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHh
Confidence            4789999987 9999999998888999 666654 34444332 222    2321 1  2233322 224344443332 


Q ss_pred             -CCccEEEEecC
Q 047713          213 -GGVDRSVECTG  223 (329)
Q Consensus       213 -~~~d~Vid~~g  223 (329)
                       +.+|+++++.|
T Consensus        85 ~g~id~lv~nAg   96 (260)
T PRK08416         85 FDRVDFFISNAI   96 (260)
T ss_pred             cCCccEEEECcc
Confidence             36899998875

>PRK08328 hypothetical protein; Provisional

Probab=94.12  E-value=0.43  Score=40.70  Aligned_cols=34  Identities=29%  Similarity=0.442  Sum_probs=30.1

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      +.+|+|.|+|++|..++..+...|.+++..++.+
T Consensus        27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            5789999999999999999999999888888754

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.12  E-value=0.22  Score=39.89  Aligned_cols=44  Identities=23%  Similarity=0.258  Sum_probs=37.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF  188 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l  188 (329)
                      .|..|+++|+ -+||...++-+...|+ +|+++.+.++.+..+-+.
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e   50 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKE   50 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhh
Confidence            4788999987 7899999999999999 999999999988765443

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=94.07  E-value=0.2  Score=43.51  Aligned_cols=76  Identities=18%  Similarity=0.301  Sum_probs=47.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~Vi  219 (329)
                      .+.++||+|+ |.+|.+++..+...|+ +|+.++.++++.+.   ..... ..|..+. .++.+.+.++..  +.+|++|
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSSA-EEVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            3678999986 9999999999988999 78887766544321   11111 1233222 123333333322  3689999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      ++.|.
T Consensus        83 ~~Ag~   87 (266)
T PRK06171         83 NNAGI   87 (266)
T ss_pred             ECCcc
Confidence            98873

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.07  E-value=0.15  Score=46.37  Aligned_cols=74  Identities=16%  Similarity=0.167  Sum_probs=46.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHhcCC----c-eeeCCCCCCchHHHHHHhhhcC-Cc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFN-EAKKFGV----T-EFVNPKDYDKPVQQVIADMTNG-GV  215 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~-~~~~lg~----~-~~~~~~~~~~~~~~~~~~~~~~-~~  215 (329)
                      +|.+|||+|+ |.+|..++..+...|. +|+++++++.... ..+.++.    . ...|..+.     ..+.++..+ ++
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~~~~~~~~   76 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA-----AKLRKAIAEFKP   76 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH-----HHHHHHHhhcCC
Confidence            4689999986 9999999999988898 7888876554322 2122221    1 11122221     223333334 68


Q ss_pred             cEEEEecC
Q 047713          216 DRSVECTG  223 (329)
Q Consensus       216 d~Vid~~g  223 (329)
                      |+||++++
T Consensus        77 d~vih~A~   84 (349)
T TIGR02622        77 EIVFHLAA   84 (349)
T ss_pred             CEEEECCc
Confidence            99999987

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=94.05  E-value=0.42  Score=47.10  Aligned_cols=78  Identities=18%  Similarity=0.300  Sum_probs=58.1

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      .++|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...++-..+    -.+.+++..-..+|.++-++..
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat----~~~~L~~agi~~A~~vvv~~~d  474 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYGDAT----RMDLLESAGAAKAEVLINAIDD  474 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEEeCC----CHHHHHhcCCCcCCEEEEEeCC
Confidence            3689999999999999999999998 8999999999999999988654432111    1223444333378999988876


Q ss_pred             HHH
Q 047713          225 VQA  227 (329)
Q Consensus       225 ~~~  227 (329)
                      ++.
T Consensus       475 ~~~  477 (621)
T PRK03562        475 PQT  477 (621)
T ss_pred             HHH
Confidence            443

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.04  E-value=0.45  Score=45.34  Aligned_cols=69  Identities=29%  Similarity=0.317  Sum_probs=46.6

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-----hHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEE
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS-----RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~-----~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~V  218 (329)
                      .+++|+|.|+|.+|+.++..++..|. .|++++..+.     ..+.+++.|..........           ...++|+|
T Consensus        15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-----------~~~~~D~V   82 (480)
T PRK01438         15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGPT-----------LPEDTDLV   82 (480)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-----------ccCCCCEE
Confidence            47799999999999999999999999 7888875442     2344666676543322110           01247788


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      +.+.|.
T Consensus        83 v~s~Gi   88 (480)
T PRK01438         83 VTSPGW   88 (480)
T ss_pred             EECCCc
Confidence            777764

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.98  E-value=0.32  Score=42.81  Aligned_cols=76  Identities=17%  Similarity=0.214  Sum_probs=54.4

Q ss_pred             CCCCeEEEEcCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          143 KKGQSVAIFGLGA-VGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       143 ~~g~~VlI~Gag~-iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      -.|.+|+|.|.|. +|..++.++...|+ .|..+.+..+.                     +.+.+     ..+|+|+++
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~---------------------L~~~~-----~~aDIvI~A  209 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQN---------------------LPELV-----KQADIIVGA  209 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchh---------------------HHHHh-----ccCCEEEEc
Confidence            4689999999876 99999999999999 78777542111                     11111     248999999


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          222 TGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +|.+..+.  .+.++++ ..++.++..
T Consensus       210 tG~~~~v~--~~~lk~g-avViDvg~n  233 (283)
T PRK14192        210 VGKPELIK--KDWIKQG-AVVVDAGFH  233 (283)
T ss_pred             cCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence            98765433  3458887 888888764

>KOG3010 consensus Methyltransferase [General function prediction only]

Probab=93.98  E-value=0.11  Score=43.71  Aligned_cols=103  Identities=20%  Similarity=0.241  Sum_probs=64.3

Q ss_pred             hhccCCCCCCeEEEE-cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC--
Q 047713          137 VNVAKPKKGQSVAIF-GLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG--  213 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~-Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--  213 (329)
                      ...+...++.++++- |+|+ |+++..+|-+  .+.|++++.+++.++.+++.-...-  .+.......+.+..+.++  
T Consensus        25 ~~ia~~~~~h~~a~DvG~G~-Gqa~~~iae~--~k~VIatD~s~~mL~~a~k~~~~~y--~~t~~~ms~~~~v~L~g~e~   99 (261)
T KOG3010|consen   25 KKIASRTEGHRLAWDVGTGN-GQAARGIAEH--YKEVIATDVSEAMLKVAKKHPPVTY--CHTPSTMSSDEMVDLLGGEE   99 (261)
T ss_pred             HHHHhhCCCcceEEEeccCC-CcchHHHHHh--hhhheeecCCHHHHHHhhcCCCccc--ccCCccccccccccccCCCc
Confidence            345666777776655 6654 6887777777  3589999999999998877432111  111111122334455544  


Q ss_pred             CccEEEEecC-----CHHHHHHHHHhhccCCeEEEEe
Q 047713          214 GVDRSVECTG-----SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       214 ~~d~Vid~~g-----~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      .+|+|+-+-.     .+..++.+-+.|++. |.++.+
T Consensus       100 SVDlI~~Aqa~HWFdle~fy~~~~rvLRk~-Gg~iav  135 (261)
T KOG3010|consen  100 SVDLITAAQAVHWFDLERFYKEAYRVLRKD-GGLIAV  135 (261)
T ss_pred             ceeeehhhhhHHhhchHHHHHHHHHHcCCC-CCEEEE
Confidence            7999874322     345677888899998 744444

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=93.95  E-value=0.25  Score=42.35  Aligned_cols=83  Identities=17%  Similarity=0.217  Sum_probs=50.8

Q ss_pred             CCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce--e--eCCCC-CCchHHHHHHhh
Q 047713          141 KPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE--F--VNPKD-YDKPVQQVIADM  210 (329)
Q Consensus       141 ~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~--~--~~~~~-~~~~~~~~~~~~  210 (329)
                      ...++.++||+|+ |.+|...++.+...|+ .|+.++++.++.+.    +++.+...  +  .+... ...++.+.+..+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence            3457899999986 9999999998888898 78888887765432    23333221  1  12221 111233333333


Q ss_pred             hc--CCccEEEEecCC
Q 047713          211 TN--GGVDRSVECTGS  224 (329)
Q Consensus       211 ~~--~~~d~Vid~~g~  224 (329)
                      ..  +.+|+||.+.|.
T Consensus        87 ~~~~~~id~vi~~Ag~  102 (247)
T PRK08945         87 EEQFGRLDGVLHNAGL  102 (247)
T ss_pred             HHHhCCCCEEEECCcc
Confidence            22  368999988763

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=93.93  E-value=0.57  Score=39.80  Aligned_cols=73  Identities=21%  Similarity=0.330  Sum_probs=54.0

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH--hcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK--KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~--~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      .++|.|+|.+|...++.+...|. .|+.++.++++.+...  ++....+.-...    -.+.++++--..+|+++-++|.
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t----~~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVIGDAT----DEDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEEecCC----CHHHHHhcCCCcCCEEEEeeCC
Confidence            57888999999999999999998 8999999999877733  365544432222    2345566533489999988876

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=93.89  E-value=1.1  Score=39.46  Aligned_cols=112  Identities=16%  Similarity=0.079  Sum_probs=70.7

Q ss_pred             CCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-C----ceeeCCCCCC--chHHHHHHhhhc
Q 047713          141 KPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG-V----TEFVNPKDYD--KPVQQVIADMTN  212 (329)
Q Consensus       141 ~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg-~----~~~~~~~~~~--~~~~~~~~~~~~  212 (329)
                      ..-+++.|+|+|+ ++.|...+.-+...|. .|++..-.++..+.++..- .    +-..|..+.+  ....+.+++..+
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            3456778999998 9999999998888999 7877766666555443221 1    1122332221  124445556555


Q ss_pred             C-CccEEEEecCCH--------------------------HHHHHHHHhhccCCeEEEEeccCCCCCc
Q 047713          213 G-GVDRSVECTGSV--------------------------QAMISAFECVHDGWGVAVLVGVPNKDDA  253 (329)
Q Consensus       213 ~-~~d~Vid~~g~~--------------------------~~~~~~~~~l~~~~G~vv~~g~~~~~~~  253 (329)
                      . +.-.+++++|..                          +.....+.++++..||++.++...+...
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~  171 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVA  171 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCcc
Confidence            5 778888888721                          2233444566655699999987665433

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=93.89  E-value=0.26  Score=42.93  Aligned_cols=105  Identities=15%  Similarity=0.172  Sum_probs=66.6

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhcCC
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      +....++.++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++.... ..+.....+  +..  .....+.
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D--~~~--~~~~~~~  117 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAND--ILK--KDFPENT  117 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEECC--ccc--CCCCCCC
Confidence            45667888999999998763 5566777777777 899999999888877764221 111111111  110  0111237


Q ss_pred             ccEEEEec--------CCHHHHHHHHHhhccCCeEEEEecc
Q 047713          215 VDRSVECT--------GSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       215 ~d~Vid~~--------g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ||+|+..-        .....+..+.+.|+|+ |.++....
T Consensus       118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~  157 (263)
T PTZ00098        118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY  157 (263)
T ss_pred             eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            99998521        1134567778899998 99987754

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.89  E-value=0.39  Score=44.24  Aligned_cols=35  Identities=26%  Similarity=0.271  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      .+.+|+|.|+|++|..++..+...|..++..++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            46789999999999999999999999889888876

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=93.88  E-value=0.59  Score=42.73  Aligned_cols=97  Identities=15%  Similarity=0.282  Sum_probs=61.9

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEc--CChhh-HHHHHhcCCceeeCCCCCC-chH--------------H
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVS--GASRIIGVD--LNPSR-FNEAKKFGVTEFVNPKDYD-KPV--------------Q  204 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~--G~~~vv~~~--~~~~~-~~~~~~lg~~~~~~~~~~~-~~~--------------~  204 (329)
                      ++|.|.|+ |.||..++++.+..  .. +|++++  .+.++ .+++++++...++..++.. ..+              .
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~   80 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE   80 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence            47889997 99999999988755  34 666664  33333 3467788887665443211 001              1


Q ss_pred             HHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713          205 QVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       205 ~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~  244 (329)
                      +.+.++... .+|+|+.++++...+.-.+..++.+ -++.+
T Consensus        81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL  120 (385)
T PRK05447         81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL  120 (385)
T ss_pred             hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence            122233333 6899999998777788888888764 44444

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=93.86  E-value=0.49  Score=36.19  Aligned_cols=88  Identities=15%  Similarity=0.298  Sum_probs=50.8

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCC-EEEEEcCCh--hh-HHHHHhcCCceeeCCCCCCchHHHHHH--------------
Q 047713          148 VAIFGL-GAVGLAAAEGARVSGAS-RIIGVDLNP--SR-FNEAKKFGVTEFVNPKDYDKPVQQVIA--------------  208 (329)
Q Consensus       148 VlI~Ga-g~iG~aai~la~~~G~~-~vv~~~~~~--~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~--------------  208 (329)
                      |.|.|+ |.||..++++.+...-+ +|++.+...  ++ .+++++|....++..++.   ....++              
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~---~~~~l~~~~~~~~~~~~v~~   77 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEE---AYEELKKALPSKGPGIEVLS   77 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHH---HHHHHHHHHHHTTSSSEEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHH---HHHHHHHHhhhcCCCCEEEe
Confidence            567898 99999999999988722 566655432  22 345778888776654432   122222              


Q ss_pred             ------hhhc-CCccEEEEecCCHHHHHHHHHhhccC
Q 047713          209 ------DMTN-GGVDRSVECTGSVQAMISAFECVHDG  238 (329)
Q Consensus       209 ------~~~~-~~~d~Vid~~g~~~~~~~~~~~l~~~  238 (329)
                            ++.. ..+|+|+.++-+-..+.-.+..+..+
T Consensus        78 G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g  114 (129)
T PF02670_consen   78 GPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG  114 (129)
T ss_dssp             SHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred             ChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence                  2222 25677776665555666666666653

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=93.85  E-value=0.45  Score=42.22  Aligned_cols=57  Identities=18%  Similarity=0.120  Sum_probs=46.2

Q ss_pred             hccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHhcCCceeeC
Q 047713          138 NVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL---NPSRFNEAKKFGVTEFVN  195 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~---~~~~~~~~~~lg~~~~~~  195 (329)
                      ....+.||.++||-.. |++|...+.++...|+ +++.+-.   +.||...++.||+..+..
T Consensus        96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~t  156 (362)
T KOG1252|consen   96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIILT  156 (362)
T ss_pred             HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEec
Confidence            3457899999999975 9999999999999999 6666644   457888899999876553

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.84  E-value=1.4  Score=37.62  Aligned_cols=77  Identities=16%  Similarity=0.152  Sum_probs=44.5

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhH-H---HHHhcCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD-LNPSRF-N---EAKKFGVTE-F--VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~-~~~~~~-~---~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +.++||+|+ |.+|.+.+.-+...|+ +++.+. .+.++. +   .+++.+... .  .|..+.+ +..+.+.++..  +
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   83 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTRE-GCETLAKATIDRYG   83 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHH-HHHHHHHHHHHHcC
Confidence            678999986 9999999998888998 555443 332222 2   233333321 1  2332211 23333333322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|+||.+.|
T Consensus        84 ~~d~vi~~ag   93 (252)
T PRK06077         84 VADILVNNAG   93 (252)
T ss_pred             CCCEEEECCC
Confidence            6899999987

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=93.83  E-value=3.1  Score=35.19  Aligned_cols=92  Identities=12%  Similarity=0.061  Sum_probs=53.7

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC--hhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN--PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~--~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      ++.+|||.|+|.++.-=+..+...|+ +|.+++..  ++-.++.+ .+.-..+ ..+..  . ..   +  .++++||-+
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~-~~~i~~~-~r~~~--~-~d---l--~g~~LViaA   92 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKK-YGNLKLI-KGNYD--K-EF---I--KDKHLIVIA   92 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHh-CCCEEEE-eCCCC--h-HH---h--CCCcEEEEC
Confidence            47899999999999888888888898 67777543  22222222 2221111 11211  0 01   1  368999999


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          222 TGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ++.+..-+......+.. +.++....
T Consensus        93 TdD~~vN~~I~~~a~~~-~~lvn~vd  117 (223)
T PRK05562         93 TDDEKLNNKIRKHCDRL-YKLYIDCS  117 (223)
T ss_pred             CCCHHHHHHHHHHHHHc-CCeEEEcC
Confidence            97654444444455554 65555543

>PRK06940 short chain dehydrogenase; Provisional

Probab=93.83  E-value=0.49  Score=41.37  Aligned_cols=77  Identities=25%  Similarity=0.359  Sum_probs=47.5

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCCce---eeCCCCCCchHHHHHHhhh-cCCcc
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK---FGVTE---FVNPKDYDKPVQQVIADMT-NGGVD  216 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~---lg~~~---~~~~~~~~~~~~~~~~~~~-~~~~d  216 (329)
                      +++++|+|+|++|.+++..+. .|. +|+.+++++++.+.+ ++   .+...   ..|..+.+ +..+.+.+.. .+++|
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~i~~~~~~~~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRE-SVKALAATAQTLGPVT   78 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHhcCCCC
Confidence            357888898999999998875 788 788888877655432 22   23221   12333321 2333333321 13799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|++.|.
T Consensus        79 ~li~nAG~   86 (275)
T PRK06940         79 GLVHTAGV   86 (275)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK06101 short chain dehydrogenase; Provisional

Probab=93.80  E-value=0.34  Score=41.35  Aligned_cols=75  Identities=16%  Similarity=0.113  Sum_probs=46.6

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--c-eeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV--T-EFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~--~-~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      .+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+.+.+.  . ...|..+. +++.+.+++.. ...|.++.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~-~~~d~~i~~   78 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTDH-PGTKAALSQLP-FIPELWIFN   78 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCCH-HHHHHHHHhcc-cCCCEEEEc
Confidence            46899986 9999998888888899 78888888877766544332  1 12233322 12444444332 235666655


Q ss_pred             cC
Q 047713          222 TG  223 (329)
Q Consensus       222 ~g  223 (329)
                      .|
T Consensus        79 ag   80 (240)
T PRK06101         79 AG   80 (240)
T ss_pred             Cc
Confidence            54

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=93.80  E-value=0.043  Score=43.31  Aligned_cols=94  Identities=19%  Similarity=0.204  Sum_probs=55.4

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCC----CchHHHHHHhhhcCCccEEEEecC
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY----DKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~----~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      |+|.|+|.+|...+..++..|. .|..+.+.+ +.+.+++-|........+.    .......  ....+.+|+||-|+=
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK   76 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK   76 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence            6788999999999998888888 788888777 7777776664322211000    0000000  112237999999985


Q ss_pred             CHHHHHHHHH----hhccCCeEEEEecc
Q 047713          224 SVQAMISAFE----CVHDGWGVAVLVGV  247 (329)
Q Consensus       224 ~~~~~~~~~~----~l~~~~G~vv~~g~  247 (329)
                      +. ....+++    .+.+. ..++.+..
T Consensus        77 a~-~~~~~l~~l~~~~~~~-t~iv~~qN  102 (151)
T PF02558_consen   77 AY-QLEQALQSLKPYLDPN-TTIVSLQN  102 (151)
T ss_dssp             GG-GHHHHHHHHCTGEETT-EEEEEESS
T ss_pred             cc-chHHHHHHHhhccCCC-cEEEEEeC
Confidence            43 3333434    44454 56776654

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PLN02244 tocopherol O-methyltransferase

Probab=93.78  E-value=0.54  Score=42.66  Aligned_cols=98  Identities=20%  Similarity=0.266  Sum_probs=61.9

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhcCCccEE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTNGGVDRS  218 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~d~V  218 (329)
                      +++++||=+|+|. |..+..+++..|+ +|++++.++...+.+++.    +...-+.....+  ..+  .....+.||+|
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D--~~~--~~~~~~~FD~V  190 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD--ALN--QPFEDGQFDLV  190 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC--ccc--CCCCCCCccEE
Confidence            6788999888763 6677788887787 899999999877766543    321111111111  100  01122379999


Q ss_pred             EEecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          219 VECTG------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       219 id~~g------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +-...      ....+....+.|+++ |+++....
T Consensus       191 ~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~  224 (340)
T PLN02244        191 WSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW  224 (340)
T ss_pred             EECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            75322      124567888899998 99888754

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=93.71  E-value=0.64  Score=38.59  Aligned_cols=34  Identities=21%  Similarity=0.329  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      ..+|+|.|+|++|..++..+...|.+++..++.+
T Consensus        21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            5789999999999999999999999888888764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PLN03139 formate dehydrogenase; Provisional

Probab=93.68  E-value=0.7  Score=42.54  Aligned_cols=45  Identities=18%  Similarity=0.211  Sum_probs=35.8

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG  189 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg  189 (329)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g  242 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG  242 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence            58899999999999999999999999 8888887643333334444

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.65  E-value=0.51  Score=40.92  Aligned_cols=79  Identities=22%  Similarity=0.358  Sum_probs=47.6

Q ss_pred             CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCC---hhhHHH-HHhcCCce--eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLN---PSRFNE-AKKFGVTE--FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~---~~~~~~-~~~lg~~~--~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +++++||+|+   +++|.+++..+...|+ +|+.+.+.   +++.+. .++++...  ..|..+.+ +..+.+.+...  
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~   82 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDE-QIDALFASLGQHW   82 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHH-HHHHHHHHHHHHh
Confidence            4789999983   6899999998888998 67766433   233322 23344322  22333222 24444444332  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +.+|+++++.|.
T Consensus        83 g~iD~lvnnAG~   94 (260)
T PRK06997         83 DGLDGLVHSIGF   94 (260)
T ss_pred             CCCcEEEEcccc
Confidence            479999998873

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=93.64  E-value=0.44  Score=41.24  Aligned_cols=79  Identities=16%  Similarity=0.259  Sum_probs=45.4

Q ss_pred             CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCC------hhhHHHHHhcCCc-ee--eCCCCCCchHHHHHHhhh
Q 047713          144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLN------PSRFNEAKKFGVT-EF--VNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~------~~~~~~~~~lg~~-~~--~~~~~~~~~~~~~~~~~~  211 (329)
                      .|++++|+|+   +++|.+++..+...|+ +|+.+..+      ++..+.+++.+.. ..  .|..+.+ +..+.+++..
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~   82 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDA-QIEETFETIK   82 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHH-HHHHHHHHHH
Confidence            4789999985   5899999998888999 66655332      1222223222211 11  2332221 2333333332


Q ss_pred             c--CCccEEEEecCC
Q 047713          212 N--GGVDRSVECTGS  224 (329)
Q Consensus       212 ~--~~~d~Vid~~g~  224 (329)
                      .  +.+|+++++.|.
T Consensus        83 ~~~g~iD~lv~nag~   97 (258)
T PRK07370         83 QKWGKLDILVHCLAF   97 (258)
T ss_pred             HHcCCCCEEEEcccc
Confidence            2  379999998873

>PRK07775 short chain dehydrogenase; Provisional

Probab=93.63  E-value=0.55  Score=41.01  Aligned_cols=79  Identities=16%  Similarity=0.202  Sum_probs=48.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhh--cC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMT--NG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~--~~  213 (329)
                      +..+++|+|+ |.+|.+++..+...|+ +|+.+.++.++.+.    ++..+....   .|..+. ++..+.+.+..  .+
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   86 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDP-DSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHhcC
Confidence            3468999986 9999999998888898 77777776655432    222333221   233221 12333333322  13


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|.+.|.
T Consensus        87 ~id~vi~~Ag~   97 (274)
T PRK07775         87 EIEVLVSGAGD   97 (274)
T ss_pred             CCCEEEECCCc
Confidence            68999988874

>PRK05650 short chain dehydrogenase; Provisional

Probab=93.63  E-value=0.45  Score=41.36  Aligned_cols=76  Identities=26%  Similarity=0.344  Sum_probs=46.9

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhhc--CCcc
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      ++||+|+ |.+|...+..+...|. +|+.++++.++.+.    ++..+....   .|..+. .++.+.+.+...  +++|
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDY-SQLTALAQACEEKWGGID   79 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCC
Confidence            6899987 9999999998888899 78888877766443    222332221   122221 122333332221  3699


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|.+.|.
T Consensus        80 ~lI~~ag~   87 (270)
T PRK05650         80 VIVNNAGV   87 (270)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.62  E-value=0.49  Score=40.26  Aligned_cols=78  Identities=24%  Similarity=0.360  Sum_probs=46.8

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HhcCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFNEA----KKFGVTE-F--VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~~~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +.++||+|+ |.+|...+..+...|+ +|+.+ ++++++.+.+    +..+... +  .|..+. .++.+.+.+...  +
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSE-EDVENLVEQIVEKFG   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhC
Confidence            568999986 9999999988777898 67777 7776654332    2222211 1  122221 123333333222  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+||.+.|.
T Consensus        83 ~id~vi~~ag~   93 (247)
T PRK05565         83 KIDILVNNAGI   93 (247)
T ss_pred             CCCEEEECCCc
Confidence            69999988864

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=93.61  E-value=0.71  Score=41.49  Aligned_cols=100  Identities=20%  Similarity=0.297  Sum_probs=60.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcC----CCEEEEEcC--ChhhHHHHHhcCCcee--------------eCCCCCCchHHHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSG----ASRIIGVDL--NPSRFNEAKKFGVTEF--------------VNPKDYDKPVQQV  206 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G----~~~vv~~~~--~~~~~~~~~~lg~~~~--------------~~~~~~~~~~~~~  206 (329)
                      +|.|.|.|.+|...++.+...+    . .|+++..  +.+...++.++...+-              ++-..-.-.-.+.
T Consensus         1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            4788999999999999887653    4 5555532  3334445544443110              0000000000001


Q ss_pred             HHhhh-cC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          207 IADMT-NG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       207 ~~~~~-~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      ..++. .+ ++|+||+|+|.....+.+...+..+ ++.+.++.+
T Consensus        80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP  122 (325)
T TIGR01532        80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHP  122 (325)
T ss_pred             hhhccccccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCC
Confidence            22222 22 8999999999877778888889887 888888765

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=93.61  E-value=0.47  Score=44.10  Aligned_cols=74  Identities=22%  Similarity=0.309  Sum_probs=46.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC--Cce-eeCCCCCCchHHHHHHhhhcCCccEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFG--VTE-FVNPKDYDKPVQQVIADMTNGGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg--~~~-~~~~~~~~~~~~~~~~~~~~~~~d~V  218 (329)
                      ++++++|+|+ |.+|.+.+..+...|+ +|+.+++++++.+.. ....  ... ..|..+.     +.+.+.. +++|++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~-----~~v~~~l-~~IDiL  249 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQE-----AALAELL-EKVDIL  249 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH-----HHHHHHh-CCCCEE
Confidence            4789999987 9999999998888898 788887776654322 1111  111 1222221     1233322 369999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      |++.|.
T Consensus       250 InnAGi  255 (406)
T PRK07424        250 IINHGI  255 (406)
T ss_pred             EECCCc
Confidence            988763

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=93.59  E-value=1.3  Score=36.93  Aligned_cols=98  Identities=20%  Similarity=0.209  Sum_probs=62.4

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh-cCCccEE
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT-NGGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~-~~~~d~V  218 (329)
                      ++.+||-.|+|. |..+..+++.....+|++++.+++..+.+++    .+...+- ....+  ....+.... .+.+|.|
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~~d--~~~~l~~~~~~~~~D~V  115 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLCGD--AVEVLLDMFPDGSLDRI  115 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEecC--HHHHHHHHcCccccceE
Confidence            567888888864 7777788877644489999999988877654    2322211 11112  322333222 3378988


Q ss_pred             EEecC--------------CHHHHHHHHHhhccCCeEEEEec
Q 047713          219 VECTG--------------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       219 id~~g--------------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +-...              ....++.+.+.|+++ |.++...
T Consensus       116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~  156 (202)
T PRK00121        116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT  156 (202)
T ss_pred             EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence            75332              235678888899998 9988763

>PRK08278 short chain dehydrogenase; Provisional

Probab=93.59  E-value=0.46  Score=41.48  Aligned_cols=79  Identities=25%  Similarity=0.344  Sum_probs=47.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-------H----HHHHhcCCce---eeCCCCCCchHHHHHH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-------F----NEAKKFGVTE---FVNPKDYDKPVQQVIA  208 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-------~----~~~~~lg~~~---~~~~~~~~~~~~~~~~  208 (329)
                      .+.++||+|+ |.+|..++..+...|+ +|+.++++.+.       .    +.++..+...   ..|..+. ++..+.+.
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~   82 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDE-DQVAAAVA   82 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHH
Confidence            4678999986 9999999998888898 78877765432       1    1122333321   1233222 12333333


Q ss_pred             hhhc--CCccEEEEecCC
Q 047713          209 DMTN--GGVDRSVECTGS  224 (329)
Q Consensus       209 ~~~~--~~~d~Vid~~g~  224 (329)
                      +...  +.+|++|++.|.
T Consensus        83 ~~~~~~g~id~li~~ag~  100 (273)
T PRK08278         83 KAVERFGGIDICVNNASA  100 (273)
T ss_pred             HHHHHhCCCCEEEECCCC
Confidence            3221  369999998874

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=93.59  E-value=0.59  Score=45.90  Aligned_cols=77  Identities=16%  Similarity=0.192  Sum_probs=57.9

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      +.|+|.|.|.+|+.+++.++..|. .+++++.++++.+.+++.|...++-...    -.+.+++..-..+|.++-+.+.+
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat----~~~~L~~agi~~A~~vv~~~~d~  475 (601)
T PRK03659        401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGDAT----QLELLRAAGAEKAEAIVITCNEP  475 (601)
T ss_pred             CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEeeCC----CHHHHHhcCCccCCEEEEEeCCH
Confidence            578889999999999999999998 8999999999999999988654432211    12234443333789999888764


Q ss_pred             HH
Q 047713          226 QA  227 (329)
Q Consensus       226 ~~  227 (329)
                      +.
T Consensus       476 ~~  477 (601)
T PRK03659        476 ED  477 (601)
T ss_pred             HH
Confidence            43

>PRK09135 pteridine reductase; Provisional

Probab=93.58  E-value=0.57  Score=39.89  Aligned_cols=78  Identities=17%  Similarity=0.161  Sum_probs=46.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHHHH----HhcCC--c--eeeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN-PSRFNEA----KKFGV--T--EFVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~-~~~~~~~----~~lg~--~--~~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .+.++||+|+ |.+|..++..+...|+ +|+.++++ +++.+.+    ++...  .  ...|..+.+ .+...+++... 
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~   82 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPD-ALPELVAACVAA   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHH-HHHHHHHHHHHH
Confidence            4578999987 9999999998888898 78887764 3333222    22211  1  122332221 23333333221 


Q ss_pred             -CCccEEEEecC
Q 047713          213 -GGVDRSVECTG  223 (329)
Q Consensus       213 -~~~d~Vid~~g  223 (329)
                       +++|+||.+.|
T Consensus        83 ~~~~d~vi~~ag   94 (249)
T PRK09135         83 FGRLDALVNNAS   94 (249)
T ss_pred             cCCCCEEEECCC
Confidence             36899999987

>PRK08223 hypothetical protein; Validated

Probab=93.54  E-value=0.41  Score=41.99  Aligned_cols=35  Identities=29%  Similarity=0.293  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      ..+|+|.|+|++|..+++.+...|..++..++.+.
T Consensus        27 ~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         27 NSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             cCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            57899999999999999999999998888887653

>TIGR02415 23BDH acetoin reductases

Probab=93.51  E-value=0.5  Score=40.53  Aligned_cols=77  Identities=25%  Similarity=0.290  Sum_probs=47.4

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCc
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGV  215 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~  215 (329)
                      ++++|+|+ |.+|..+++.+...|+ +|+.+.+++++.+.    +++.+...   ..|..+.+ +..+.+.+...  +.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKD-QVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCCC
Confidence            36899986 9999999998888998 78888777654432    22333221   12332221 23333333322  268


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |++|.+.|.
T Consensus        79 d~vi~~ag~   87 (254)
T TIGR02415        79 DVMVNNAGV   87 (254)
T ss_pred             CEEEECCCc
Confidence            999998874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PLN03013 cysteine synthase

Probab=93.51  E-value=1.7  Score=40.63  Aligned_cols=57  Identities=23%  Similarity=0.187  Sum_probs=42.7

Q ss_pred             hccCCCCCCeEEEEc-CCHHHHHHHHHHHHcCCCEEEEEc--CChhhHHHHHhcCCceee
Q 047713          138 NVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVD--LNPSRFNEAKKFGVTEFV  194 (329)
Q Consensus       138 ~~~~~~~g~~VlI~G-ag~iG~aai~la~~~G~~~vv~~~--~~~~~~~~~~~lg~~~~~  194 (329)
                      +...+.+|.+.+|.. +|+.|++.+..++.+|++-++++.  .++++.+.++.+|++.+.
T Consensus       167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~  226 (429)
T PLN03013        167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL  226 (429)
T ss_pred             HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence            455667886666665 599999999999999995444433  256788899999986554

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=93.49  E-value=0.63  Score=38.15  Aligned_cols=78  Identities=24%  Similarity=0.325  Sum_probs=51.0

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHhcCC--ce-ee--CCCCCCchHHHHHHhhhc--CCc
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-FNEAKKFGV--TE-FV--NPKDYDKPVQQVIADMTN--GGV  215 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-~~~~~~lg~--~~-~~--~~~~~~~~~~~~~~~~~~--~~~  215 (329)
                      .+..+|+|+ ++||.+..|.+...|+ +|.+.+.+.+. .+.++.|+.  ++ .+  |..+. .+....+++...  +.+
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Ga-rv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a-~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGA-RVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKA-HDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCc-EEEEeecchhhHHHHHhhcCCCCccceeeeccCcH-HHHHHHHHHHHHhcCCC
Confidence            345677765 9999999999999999 78888776554 445777775  22 11  22221 123333444432  378


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      +++++|.|.
T Consensus        92 svlVncAGI  100 (256)
T KOG1200|consen   92 SVLVNCAGI  100 (256)
T ss_pred             cEEEEcCcc
Confidence            999999984

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=93.48  E-value=0.25  Score=41.10  Aligned_cols=34  Identities=35%  Similarity=0.531  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      ..+|+|.|+|++|..+++.+...|..+++.++.+
T Consensus        21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4689999999999999999999999888888877

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.46  E-value=0.63  Score=41.13  Aligned_cols=92  Identities=15%  Similarity=0.195  Sum_probs=62.6

Q ss_pred             ccccccchhhhhhhccCC-CCCCeEEEEc-CCHHHHHHHHHHHHcCCCEEEEEc-CChhhHHHHHhcCCceeeCCCCCCc
Q 047713          125 LSCGISTGFGATVNVAKP-KKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVD-LNPSRFNEAKKFGVTEFVNPKDYDK  201 (329)
Q Consensus       125 ~~~~~~ta~~~l~~~~~~-~~g~~VlI~G-ag~iG~aai~la~~~G~~~vv~~~-~~~~~~~~~~~lg~~~~~~~~~~~~  201 (329)
                      +||+....+. +++...+ -.|++|+|+| ++.+|.-.+.++...|+ .|.+.. ++..                     
T Consensus       138 ~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~---------------------  194 (296)
T PRK14188        138 VPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD---------------------  194 (296)
T ss_pred             cCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC---------------------
Confidence            4554333332 3444443 4699999999 69999999999998898 787773 2211                     


Q ss_pred             hHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          202 PVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       202 ~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +.+..+     ..|+|+-++|.+..+...+  ++++ ..++.+|..
T Consensus       195 -l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin  232 (296)
T PRK14188        195 -LPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN  232 (296)
T ss_pred             -HHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence             111111     3799999999877666554  8887 888888864

>PRK04266 fibrillarin; Provisional

Probab=93.45  E-value=0.67  Score=39.36  Aligned_cols=102  Identities=19%  Similarity=0.179  Sum_probs=59.5

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--c--eeeCCCCCCchHHHHHHhhhcC
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV--T--EFVNPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~--~--~~~~~~~~~~~~~~~~~~~~~~  213 (329)
                      +...+++|++||=.|+|. |..+..+++..+..+|++++.+++..+.+.+...  .  ..+. .+.. .. .....+ .+
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~-~D~~-~~-~~~~~l-~~  140 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPIL-ADAR-KP-ERYAHV-VE  140 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEE-CCCC-Cc-chhhhc-cc
Confidence            346889999999888653 4455666666543389999999987664433211  1  1110 0110 00 000111 13


Q ss_pred             CccEEEEecCCHH----HHHHHHHhhccCCeEEEEe
Q 047713          214 GVDRSVECTGSVQ----AMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       214 ~~d~Vid~~g~~~----~~~~~~~~l~~~~G~vv~~  245 (329)
                      .+|+|+.....+.    .++.+.+.|+++ |+++..
T Consensus       141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~  175 (226)
T PRK04266        141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA  175 (226)
T ss_pred             cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            5999985443321    356777899998 998874

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=93.43  E-value=1.2  Score=37.56  Aligned_cols=101  Identities=17%  Similarity=0.112  Sum_probs=60.0

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceeeC-------CCCCC-chHHHHHHhhh
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFVN-------PKDYD-KPVQQVIADMT  211 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~-------~~~~~-~~~~~~~~~~~  211 (329)
                      .+.++.+||+.|+| .|.-++.+|. .|. .|++++.++...+.+ ++.+......       +.... .-+...+.++.
T Consensus        34 ~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~  110 (218)
T PRK13255         34 ALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT  110 (218)
T ss_pred             CCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence            44567899999887 4788888886 688 899999999887764 3333221100       00000 00000011111


Q ss_pred             ---cCCccEEEEecC----C----HHHHHHHHHhhccCCeEEEEe
Q 047713          212 ---NGGVDRSVECTG----S----VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       212 ---~~~~d~Vid~~g----~----~~~~~~~~~~l~~~~G~vv~~  245 (329)
                         .+.+|.|+|..-    .    ...++...++|+++ |++..+
T Consensus       111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~  154 (218)
T PRK13255        111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV  154 (218)
T ss_pred             cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence               126899998652    1    23477788899998 875554

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=93.43  E-value=1.1  Score=38.68  Aligned_cols=97  Identities=23%  Similarity=0.230  Sum_probs=60.4

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhcCCccEE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTNGGVDRS  218 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~d~V  218 (329)
                      .++.+||-.|+|. |..+..+++. |. +|++++.+++..+.+++.    |...-+.....+  ..+ +.....+.+|+|
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d--~~~-l~~~~~~~fD~V  116 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCA--AQD-IAQHLETPVDLI  116 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEcC--HHH-HhhhcCCCCCEE
Confidence            4567888888763 7778888875 66 899999999988877653    221101111111  211 222223479999


Q ss_pred             EEecC------CHHHHHHHHHhhccCCeEEEEec
Q 047713          219 VECTG------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       219 id~~g------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +-...      ....+..+.+.|+++ |.++.+.
T Consensus       117 ~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  149 (255)
T PRK11036        117 LFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF  149 (255)
T ss_pred             EehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence            84321      224577888899998 9987663

>PRK07102 short chain dehydrogenase; Provisional

Probab=93.43  E-value=0.78  Score=39.09  Aligned_cols=38  Identities=21%  Similarity=0.318  Sum_probs=31.8

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE  184 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~  184 (329)
                      .+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~   40 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLER   40 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence            47899986 9999999998888898 78888888776543

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=93.42  E-value=0.58  Score=38.00  Aligned_cols=33  Identities=30%  Similarity=0.326  Sum_probs=28.7

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      +|+|.|+|++|..+++.+...|..++..++.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            488999999999999998889998888888765

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.40  E-value=0.59  Score=39.67  Aligned_cols=77  Identities=19%  Similarity=0.273  Sum_probs=44.8

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHHHH----HhcCCc-e--eeCCCCCCchHHHHHHhhhc--C
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIG-VDLNPSRFNEA----KKFGVT-E--FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~-~~~~~~~~~~~----~~lg~~-~--~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ..++||+|+ |.+|..++..+...|. .|+. +.++++..+.+    +..+.. .  ..|..+. .++.+.+.+...  +
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~~   83 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDK-AALEAAVAAAVERFG   83 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCH-HHHHHHHHHHHHHcC
Confidence            468999987 9999999999888898 5555 44444333222    222321 1  1232222 123333333322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|+||.+.|
T Consensus        84 ~id~vi~~ag   93 (249)
T PRK12825         84 RIDILVNNAG   93 (249)
T ss_pred             CCCEEEECCc
Confidence            7999999887

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.34  E-value=0.71  Score=39.89  Aligned_cols=79  Identities=15%  Similarity=0.260  Sum_probs=47.7

Q ss_pred             CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHH-HHHhcCCc---eeeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNP--SRFN-EAKKFGVT---EFVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~--~~~~-~~~~lg~~---~~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .+++++|+|+   +++|.+++..+...|+ +|+.++++.  +..+ ..++++..   ...|..+.+ +..+.+.+...  
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~~   83 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEE-HLASLADRVREHV   83 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHH-HHHHHHHHHHHHc
Confidence            4789999974   7999999998888999 787776542  3323 33344421   122332221 23333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|+++++.|.
T Consensus        84 g~iD~li~nAG~   95 (256)
T PRK07889         84 DGLDGVVHSIGF   95 (256)
T ss_pred             CCCcEEEEcccc
Confidence            479999998874

>PRK09134 short chain dehydrogenase; Provisional

Probab=93.30  E-value=0.63  Score=40.09  Aligned_cols=79  Identities=15%  Similarity=0.126  Sum_probs=46.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH-HH---hcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNE-AK---KFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~-~~---~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .+.++||+|+ |.+|..++..+...|+ .|+.+.. +.++.+. .+   ..+...   ..|..+.. +..+.+.+...  
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~   85 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEA-EVRALVARASAAL   85 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            4678999987 9999999998888898 6655443 3333322 22   223321   12333221 23333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|.+.|.
T Consensus        86 ~~iD~vi~~ag~   97 (258)
T PRK09134         86 GPITLLVNNASL   97 (258)
T ss_pred             CCCCEEEECCcC
Confidence            369999999873

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=93.30  E-value=0.28  Score=43.10  Aligned_cols=95  Identities=20%  Similarity=0.186  Sum_probs=58.2

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      ..+.+++|+|+|++|.+++..+...|+.+|+.+.++.++.+.+ ++++....+.. +.+  ..    +. -..+|+||++
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~--~~----~~-~~~~DivIna  192 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE--LQ----EE-LADFDLIINA  192 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc--ch----hc-cccCCEEEEC
Confidence            3578999999999999999999999966899999988876544 34432110111 000  10    10 1258999999


Q ss_pred             cCCHHH-----HHHHHHhhccCCeEEEEec
Q 047713          222 TGSVQA-----MISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       222 ~g~~~~-----~~~~~~~l~~~~G~vv~~g  246 (329)
                      +...-.     .....+.+.+. ..++.+-
T Consensus       193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~Div  221 (278)
T PRK00258        193 TSAGMSGELPLPPLPLSLLRPG-TIVYDMI  221 (278)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCC-CEEEEee
Confidence            864210     01223455554 5565554

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=93.29  E-value=0.52  Score=41.47  Aligned_cols=74  Identities=14%  Similarity=0.165  Sum_probs=44.6

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc----CCcee-----eCCCCCCchHHHHHHhhhcC-Cc
Q 047713          148 VAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF----GVTEF-----VNPKDYDKPVQQVIADMTNG-GV  215 (329)
Q Consensus       148 VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l----g~~~~-----~~~~~~~~~~~~~~~~~~~~-~~  215 (329)
                      |||+|+ |.+|...+.-+...+.++++.++.++.++..++ ++    ....+     ...-+-.  -.+.+..+... ++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvr--d~~~l~~~~~~~~p   78 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVR--DKERLNRIFEEYKP   78 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCC--HHHHHHHHTT--T-
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeeccc--CHHHHHHHHhhcCC
Confidence            799986 999999999888888889999999998876543 34    11111     0111111  23455666555 89


Q ss_pred             cEEEEecC
Q 047713          216 DRSVECTG  223 (329)
Q Consensus       216 d~Vid~~g  223 (329)
                      |+||.++.
T Consensus        79 diVfHaAA   86 (293)
T PF02719_consen   79 DIVFHAAA   86 (293)
T ss_dssp             SEEEE---
T ss_pred             CEEEEChh
Confidence            99999875

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN00203 glutamyl-tRNA reductase

Probab=93.29  E-value=0.41  Score=45.88  Aligned_cols=75  Identities=17%  Similarity=0.253  Sum_probs=50.7

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+ .+++...+. ...    +. .+.+.. ...|+||.+++
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~-~~~----~~-dl~~al-~~aDVVIsAT~  338 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII-YKP----LD-EMLACA-AEADVVFTSTS  338 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE-eec----Hh-hHHHHH-hcCCEEEEccC
Confidence            68999999999999999999989987898998888876554 445321110 101    11 112211 25899999987


Q ss_pred             CHH
Q 047713          224 SVQ  226 (329)
Q Consensus       224 ~~~  226 (329)
                      ++.
T Consensus       339 s~~  341 (519)
T PLN00203        339 SET  341 (519)
T ss_pred             CCC
Confidence            543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.25  E-value=0.62  Score=39.84  Aligned_cols=77  Identities=21%  Similarity=0.200  Sum_probs=45.0

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHH-HHhcCCce-e--eCCCCCCchHHHHHHhh---hcCCc
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFNE-AKKFGVTE-F--VNPKDYDKPVQQVIADM---TNGGV  215 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~~-~~~lg~~~-~--~~~~~~~~~~~~~~~~~---~~~~~  215 (329)
                      +.++||+|+ |.+|..++..+...|+ +|+.+ .+++++.+. ..+++... .  .|..+. .++.+.+.+.   .+.++
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTDR-EQVQAMFATATEHFGKPI   82 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHHhCCCC
Confidence            578999986 9999999998888898 56554 334444333 33343211 1  233221 1233333332   22249


Q ss_pred             cEEEEecC
Q 047713          216 DRSVECTG  223 (329)
Q Consensus       216 d~Vid~~g  223 (329)
                      |++|.+.|
T Consensus        83 d~li~~ag   90 (253)
T PRK08642         83 TTVVNNAL   90 (253)
T ss_pred             eEEEECCC
Confidence            99998875

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=93.24  E-value=0.53  Score=40.96  Aligned_cols=102  Identities=16%  Similarity=0.189  Sum_probs=64.9

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcC-------CceeeCCCCCCchHHHHHHh
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKFG-------VTEFVNPKDYDKPVQQVIAD  209 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~lg-------~~~~~~~~~~~~~~~~~~~~  209 (329)
                      ....++++++||-.|+|. |..+..+++..+. .+|++++.+++..+.+++..       ...+ .....      .+.+
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i-~~~~~------d~~~  138 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNI-EWIEG------DATD  138 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCe-EEEEc------cccc
Confidence            345678899999998753 5667777776652 38999999999888775421       1110 00000      0111


Q ss_pred             h--hcCCccEEEEecC------CHHHHHHHHHhhccCCeEEEEeccC
Q 047713          210 M--TNGGVDRSVECTG------SVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       210 ~--~~~~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +  ..+.+|.|+-..+      ....+....+.|+++ |+++.+...
T Consensus       139 lp~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~  184 (261)
T PLN02233        139 LPFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFN  184 (261)
T ss_pred             CCCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECC
Confidence            1  1236999875432      234578888999998 999887654

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=93.24  E-value=0.57  Score=40.34  Aligned_cols=76  Identities=13%  Similarity=0.119  Sum_probs=46.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc--CCcee-eCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF--GVTEF-VNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l--g~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      .+.+|||+|+ |.+|..++..+...|. .|+++.+++++.......  +...+ .|..+.   . ..+.+....++|+||
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---~-~~l~~~~~~~~d~vi   90 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---S-DKLVEAIGDDSDAVI   90 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCCC---H-HHHHHHhhcCCCEEE
Confidence            3679999987 9999999998888888 788887777654332211  12211 233221   1 122222222689999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      .+.|.
T Consensus        91 ~~~g~   95 (251)
T PLN00141         91 CATGF   95 (251)
T ss_pred             ECCCC
Confidence            88764

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=93.21  E-value=0.89  Score=39.95  Aligned_cols=66  Identities=21%  Similarity=0.294  Sum_probs=47.0

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +|.|+|.|.+|...+..++..|. .|++.++++++.+.+.+.|.....   ..+  . +.+     ...|+||.|+..
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~~~--~-~~~-----~~aDlVilavp~   67 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---STD--L-SLL-----KDCDLVILALPI   67 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---cCC--H-hHh-----cCCCEEEEcCCH
Confidence            57888999999988888887887 899999999888888777642111   111  1 111     247899988853

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.20  E-value=0.68  Score=41.25  Aligned_cols=79  Identities=22%  Similarity=0.322  Sum_probs=46.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhH----HHHHhcCCceee---CCCCCCchHHHHHHhhh-cC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN-PSRF----NEAKKFGVTEFV---NPKDYDKPVQQVIADMT-NG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~-~~~~----~~~~~lg~~~~~---~~~~~~~~~~~~~~~~~-~~  213 (329)
                      .|+++||+|+ +++|.+.+..+...|+ +|+.++.. .++.    +.++..|.....   |..+.+ ...+.+.... .+
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~-~~~~~~~~~~~~g   88 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRA-TADELVATAVGLG   88 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHH-HHHHHHHHHHHhC
Confidence            4789999986 9999999998888899 67777653 2222    223333432211   222211 1222222211 24


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        89 ~iD~li~nAG~   99 (306)
T PRK07792         89 GLDIVVNNAGI   99 (306)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=93.19  E-value=0.54  Score=40.17  Aligned_cols=76  Identities=20%  Similarity=0.170  Sum_probs=44.3

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHH----HHhcCCce-e--eCCCCCCchHHHHHHhhhc--CC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFNE----AKKFGVTE-F--VNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~~----~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +++||+|+ |.+|..+++.+...|+ +|+.+ .+++++.+.    ++..+... .  .|..+. .+..+.+.++..  ++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGDVANE-ADVIAMFDAVQSAFGR   80 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCH-HHHHHHHHHHHHhcCC
Confidence            47999986 9999999998888898 55544 445444332    22233221 1  122221 123333333322  36


Q ss_pred             ccEEEEecC
Q 047713          215 VDRSVECTG  223 (329)
Q Consensus       215 ~d~Vid~~g  223 (329)
                      +|++|.++|
T Consensus        81 id~li~~ag   89 (248)
T PRK06947         81 LDALVNNAG   89 (248)
T ss_pred             CCEEEECCc
Confidence            999998887

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=93.18  E-value=2.2  Score=30.40  Aligned_cols=85  Identities=22%  Similarity=0.381  Sum_probs=53.0

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcC---CCEEE-EEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          147 SVAIFGLGAVGLAAAEGARVSG---ASRII-GVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G---~~~vv-~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      +|.++|+|.+|.+.+.-+...|   . +++ ..++++++.+.+ ++++......  +    ..+.+++     .|+||-|
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~~--~----~~~~~~~-----advvila   68 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATAD--D----NEEAAQE-----ADVVILA   68 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEESE--E----HHHHHHH-----TSEEEE-
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccccccC--C----hHHhhcc-----CCEEEEE
Confidence            4667799999999999888888   5 666 548888887665 6666433221  1    2333332     6999999


Q ss_pred             cCCHHHHHHHHHhh---ccCCeEEEEe
Q 047713          222 TGSVQAMISAFECV---HDGWGVAVLV  245 (329)
Q Consensus       222 ~g~~~~~~~~~~~l---~~~~G~vv~~  245 (329)
                      +- +..+...++.+   .++ ..++.+
T Consensus        69 v~-p~~~~~v~~~i~~~~~~-~~vis~   93 (96)
T PF03807_consen   69 VK-PQQLPEVLSEIPHLLKG-KLVISI   93 (96)
T ss_dssp             S--GGGHHHHHHHHHHHHTT-SEEEEE
T ss_pred             EC-HHHHHHHHHHHhhccCC-CEEEEe
Confidence            94 45555555443   343 455544

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=93.16  E-value=0.66  Score=41.51  Aligned_cols=37  Identities=14%  Similarity=0.123  Sum_probs=29.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR  181 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~  181 (329)
                      .|.+|||+|+ |.+|..++..+...|. +|+++.++.++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   41 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD   41 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence            4789999986 9999999998888898 77766665543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.13  E-value=0.7  Score=39.23  Aligned_cols=79  Identities=23%  Similarity=0.310  Sum_probs=45.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hHH-H---HHhcCCce-ee--CCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS-RFN-E---AKKFGVTE-FV--NPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~-~~~-~---~~~lg~~~-~~--~~~~~~~~~~~~~~~~~~--  212 (329)
                      ++.++||+|+ |.+|..++..+...|+ .|+.+.++.. +.+ .   ++..+... .+  |..+.+ ++.+.+++...  
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAE-SVERAVDEAKAEF   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            3578999986 9999999999988899 5655544433 222 1   22223221 11  332221 23333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|.||.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (248)
T PRK05557         82 GGVDILVNNAGI   93 (248)
T ss_pred             CCCCEEEECCCc
Confidence            268999988863

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=93.12  E-value=0.88  Score=42.14  Aligned_cols=80  Identities=21%  Similarity=0.298  Sum_probs=48.5

Q ss_pred             CCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-------HHHhc-CCcee-eCCCCCCchHHHHHHhhh
Q 047713          142 PKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFN-------EAKKF-GVTEF-VNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       142 ~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~-------~~~~l-g~~~~-~~~~~~~~~~~~~~~~~~  211 (329)
                      -..+.+|||+|+ |.+|..++..+...|. .|++++++..+.+       ..+.. +...+ .|..+. +.+.+.++.. 
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~-~~l~~~~~~~-  133 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDA-DSLRKVLFSE-  133 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCH-HHHHHHHHHh-
Confidence            345779999987 9999999998888898 7888887664321       11112 22222 233221 1233333322 


Q ss_pred             cCCccEEEEecCC
Q 047713          212 NGGVDRSVECTGS  224 (329)
Q Consensus       212 ~~~~d~Vid~~g~  224 (329)
                      +.++|+||+|.+.
T Consensus       134 ~~~~D~Vi~~aa~  146 (390)
T PLN02657        134 GDPVDVVVSCLAS  146 (390)
T ss_pred             CCCCcEEEECCcc
Confidence            1169999998863

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=93.11  E-value=1.1  Score=38.58  Aligned_cols=99  Identities=17%  Similarity=0.307  Sum_probs=62.3

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhcCCcc
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTNGGVD  216 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~d  216 (329)
                      +.....++.+||-.|+|. |..+..+++ .|. .|++++.+++..+.+++.... ..+. .+    ... + ....+.+|
T Consensus        36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~-~d----~~~-~-~~~~~~fD  105 (251)
T PRK10258         36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLA-GD----IES-L-PLATATFD  105 (251)
T ss_pred             HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEE-cC----ccc-C-cCCCCcEE
Confidence            334445678899998864 666666655 466 899999999998888775431 1111 01    100 0 11123699


Q ss_pred             EEEEecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          217 RSVECTG------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       217 ~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|+....      ....+....+.|+++ |.++....
T Consensus       106 ~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~  141 (251)
T PRK10258        106 LAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL  141 (251)
T ss_pred             EEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence            9985432      124577888899998 99887643

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=93.11  E-value=0.68  Score=36.53  Aligned_cols=101  Identities=23%  Similarity=0.360  Sum_probs=53.8

Q ss_pred             eEEEEcCCHHHHHHHHHHHH-cCCCEEEE-Ec-CChhhHHHHHhcCCce-----eeCCCCCC----c---hH--HHHHHh
Q 047713          147 SVAIFGLGAVGLAAAEGARV-SGASRIIG-VD-LNPSRFNEAKKFGVTE-----FVNPKDYD----K---PV--QQVIAD  209 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~-~G~~~vv~-~~-~~~~~~~~~~~lg~~~-----~~~~~~~~----~---~~--~~~~~~  209 (329)
                      +|.|+|.|.+|...++.+.. .+. .+++ .+ .+.+...++-++-..+     -+..++..    .   .+  .+...+
T Consensus         2 kv~I~G~GriGr~v~~~~~~~~~~-~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~   80 (149)
T smart00846        2 KVGINGFGRIGRLVLRALLERPDI-EVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN   80 (149)
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCC-EEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence            57889999999998887764 456 4444 44 2444444443321111     00001100    0   00  011122


Q ss_pred             hh-cC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          210 MT-NG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       210 ~~-~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +. .. ++|+|+||+|.-...+.+...+..+ .+-|.++.+.
T Consensus        81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~~G-akkViisap~  121 (149)
T smart00846       81 LPWKELGVDIVVECTGKFTTREKASAHLKAG-AKKVIISAPA  121 (149)
T ss_pred             CcccccCCeEEEeccccccchHHHHHHHHcC-CCEEEeCCCC
Confidence            22 22 7999999998655555666677765 6666666543

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=93.11  E-value=1.3  Score=41.66  Aligned_cols=104  Identities=15%  Similarity=0.260  Sum_probs=63.1

Q ss_pred             ccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhhcC
Q 047713          139 VAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       139 ~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~  213 (329)
                      ...+++|++||=.|+|+ |..++.++..++ ..+|++++.++++.+.++    ++|.+.+. ....+  .. .+.....+
T Consensus       232 ~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~-~~~~D--a~-~l~~~~~~  306 (431)
T PRK14903        232 LMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIE-IKIAD--AE-RLTEYVQD  306 (431)
T ss_pred             HhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEE-EEECc--hh-hhhhhhhc
Confidence            45678899988887653 555556666552 238999999999987764    45654321 11111  11 11112234


Q ss_pred             CccEEEE---ecCC-------------------------HHHHHHHHHhhccCCeEEEEeccC
Q 047713          214 GVDRSVE---CTGS-------------------------VQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       214 ~~d~Vid---~~g~-------------------------~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      .||.|+-   |+|.                         .+.+..+++.|+++ |.++....+
T Consensus       307 ~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs  368 (431)
T PRK14903        307 TFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCT  368 (431)
T ss_pred             cCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECC
Confidence            6999873   3332                         12366788889998 998776553

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=93.10  E-value=1.7  Score=32.50  Aligned_cols=88  Identities=25%  Similarity=0.361  Sum_probs=58.6

Q ss_pred             eEEEEcCCHHHHHHHHHHHHc--CCCEEE-EEcCChhhHHH-HHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          147 SVAIFGLGAVGLAAAEGARVS--GASRII-GVDLNPSRFNE-AKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~--G~~~vv-~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      +|.|.|.|.+|..-..-++..  +. .++ .++.++++.+. .++++.. .+..      +.+.+..   ..+|+|+.++
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~~~------~~~ll~~---~~~D~V~I~t   70 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VYTD------LEELLAD---EDVDAVIIAT   70 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EESS------HHHHHHH---TTESEEEEES
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-chhH------HHHHHHh---hcCCEEEEec
Confidence            578889999998887655544  44 444 55666666654 5667776 3321      3333222   2699999999


Q ss_pred             CCHHHHHHHHHhhccCCeEEEEecc
Q 047713          223 GSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       223 g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ....+.+.+..++..  |.-+.+..
T Consensus        71 p~~~h~~~~~~~l~~--g~~v~~EK   93 (120)
T PF01408_consen   71 PPSSHAEIAKKALEA--GKHVLVEK   93 (120)
T ss_dssp             SGGGHHHHHHHHHHT--TSEEEEES
T ss_pred             CCcchHHHHHHHHHc--CCEEEEEc
Confidence            888888888888886  55666643

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK03612 spermidine synthase; Provisional

Probab=93.09  E-value=0.76  Score=44.28  Aligned_cols=101  Identities=16%  Similarity=0.144  Sum_probs=62.5

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-Cce----eeCCCCC---CchHHHHHHhhhcCC
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG-VTE----FVNPKDY---DKPVQQVIADMTNGG  214 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg-~~~----~~~~~~~---~~~~~~~~~~~~~~~  214 (329)
                      ++.++||+.|+| .|..+..+++.-..++|++++.+++-.+.+++.- ...    .++...-   ..+..+.+++ ..++
T Consensus       296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~-~~~~  373 (521)
T PRK03612        296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRK-LAEK  373 (521)
T ss_pred             CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHh-CCCC
Confidence            457899999875 3666777777655469999999999999988721 100    1110000   0123333433 2348


Q ss_pred             ccEEEEecCC-----------HHHHHHHHHhhccCCeEEEEec
Q 047713          215 VDRSVECTGS-----------VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       215 ~d~Vid~~g~-----------~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|+|+-....           .+.++.+.+.|+++ |.++.-.
T Consensus       374 fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~  415 (521)
T PRK03612        374 FDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS  415 (521)
T ss_pred             CCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence            9998743221           13567888899998 9987654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=93.08  E-value=0.88  Score=40.03  Aligned_cols=79  Identities=19%  Similarity=0.250  Sum_probs=54.0

Q ss_pred             CCCCeEEEEcC-CHHHHHHHH-HHHHcCCCEEEEEcCChhhHHHH-----HhcCC---ceeeCCCCCCchHHHHHHhhhc
Q 047713          143 KKGQSVAIFGL-GAVGLAAAE-GARVSGASRIIGVDLNPSRFNEA-----KKFGV---TEFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~-la~~~G~~~vv~~~~~~~~~~~~-----~~lg~---~~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      +-|++.+|+|+ .+||-+-+. +|+ .|. +|+-++++++|++..     ++.++   ..++|+.+.+..+. .+++.+.
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye-~i~~~l~  123 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYE-KLLEKLA  123 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHH-HHHHHhc
Confidence            34788999987 899966555 555 899 799999999998754     33443   23556655543243 4444444


Q ss_pred             C-CccEEEEecCC
Q 047713          213 G-GVDRSVECTGS  224 (329)
Q Consensus       213 ~-~~d~Vid~~g~  224 (329)
                      + .+-+.++++|.
T Consensus       124 ~~~VgILVNNvG~  136 (312)
T KOG1014|consen  124 GLDVGILVNNVGM  136 (312)
T ss_pred             CCceEEEEecccc
Confidence            4 78888999984

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=93.07  E-value=0.43  Score=42.04  Aligned_cols=43  Identities=33%  Similarity=0.346  Sum_probs=36.6

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA  185 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~  185 (329)
                      .++++++|+|+|+.+.+++.-+...|+++++.+.++.+|.+.+
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L  167 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL  167 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence            3478999999999999999988889988898998888776554

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=93.06  E-value=0.8  Score=40.96  Aligned_cols=36  Identities=17%  Similarity=0.252  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS  180 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~  180 (329)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+.+.+
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~  170 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK  170 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence            58899999999999999999999999 8888876543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=93.05  E-value=0.68  Score=41.42  Aligned_cols=78  Identities=22%  Similarity=0.285  Sum_probs=48.8

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcC-CCEEEEEcCChhhHHH-HHhcCC---c-ee--eCCCCCCchHHHHHHhhh--cC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSG-ASRIIGVDLNPSRFNE-AKKFGV---T-EF--VNPKDYDKPVQQVIADMT--NG  213 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G-~~~vv~~~~~~~~~~~-~~~lg~---~-~~--~~~~~~~~~~~~~~~~~~--~~  213 (329)
                      +++++|+|+ +++|.+++..+...| . +|+.+.+++++.+. .+++..   . ..  .|..+.+ +..+.+.++.  .+
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~   80 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLD-SVRQFVQQFRESGR   80 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHH-HHHHHHHHHHHhCC
Confidence            568999987 999999998888889 7 78888777766543 334431   1 11  2332221 2333333332  23


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        81 ~iD~lI~nAG~   91 (314)
T TIGR01289        81 PLDALVCNAAV   91 (314)
T ss_pred             CCCEEEECCCc
Confidence            69999988873

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05855 short chain dehydrogenase; Validated

Probab=93.02  E-value=0.53  Score=45.73  Aligned_cols=79  Identities=20%  Similarity=0.291  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .+.++||+|+ |++|.+.++.+...|. +|+.+++++++.+.+    ++.|...   ..|..+.+ ...+.+.+...  +
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g  391 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDAD-AMEAFAEWVRAEHG  391 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHhcC
Confidence            4678999986 9999999998888999 788888887665432    2334311   12333221 23333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      .+|++|+++|.
T Consensus       392 ~id~lv~~Ag~  402 (582)
T PRK05855        392 VPDIVVNNAGI  402 (582)
T ss_pred             CCcEEEECCcc
Confidence            69999999874

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.01  E-value=0.62  Score=42.52  Aligned_cols=35  Identities=26%  Similarity=0.307  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      ..+|+|.|+|++|..+++.+...|.+++..++.+.
T Consensus        28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            57899999999999999999999998888887754

>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2

Probab=93.00  E-value=0.39  Score=41.42  Aligned_cols=101  Identities=19%  Similarity=0.144  Sum_probs=63.3

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCC-----CchHHHHHHhhhcCCccEE
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY-----DKPVQQVIADMTNGGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-----~~~~~~~~~~~~~~~~d~V  218 (329)
                      +.++|||+|.|. |..+-.++++...+++.+++.+++-.+.++++-........+.     ..+....+++.....+|+|
T Consensus        76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~~Dg~~~l~~~~~~~yDvI  154 (246)
T PF01564_consen   76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIIIGDGRKFLKETQEEKYDVI  154 (246)
T ss_dssp             ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEESTHHHHHHTSSST-EEEE
T ss_pred             CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEEhhhHHHHHhccCCcccEE
Confidence            578999998654 5566677777766799999999998888887421100000000     0125555665443379998


Q ss_pred             E-EecC---------CHHHHHHHHHhhccCCeEEEEec
Q 047713          219 V-ECTG---------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       219 i-d~~g---------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      + |...         +.+.++.+.++|+++ |.++.-.
T Consensus       155 i~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~  191 (246)
T PF01564_consen  155 IVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA  191 (246)
T ss_dssp             EEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence            6 5442         246788899999998 9887664

5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....

>PRK06849 hypothetical protein; Provisional

Probab=92.97  E-value=1.1  Score=41.44  Aligned_cols=79  Identities=14%  Similarity=0.098  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceeeC-CCCCCchHHHHHHhhhcC-CccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTEFVN-PKDYDKPVQQVIADMTNG-GVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~~-~~~~~~~~~~~~~~~~~~-~~d~Vi  219 (329)
                      ...+|||+|+ .++|+..+..++..|. +|+++++.+.......+ ......+. +......+.+.+.++... ++|+||
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vI   81 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLI   81 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence            3578999987 6789999999999999 88888877644332211 11112221 222223466777777666 899999


Q ss_pred             EecC
Q 047713          220 ECTG  223 (329)
Q Consensus       220 d~~g  223 (329)
                      -+..
T Consensus        82 P~~e   85 (389)
T PRK06849         82 PTCE   85 (389)
T ss_pred             ECCh
Confidence            7763

>PRK08219 short chain dehydrogenase; Provisional

Probab=92.97  E-value=0.53  Score=39.47  Aligned_cols=72  Identities=18%  Similarity=0.159  Sum_probs=45.1

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceee--CCCCCCchHHHHHHhhhcC--CccEEE
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTEFV--NPKDYDKPVQQVIADMTNG--GVDRSV  219 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~--~~~~~~~~~~~~~~~~~~~--~~d~Vi  219 (329)
                      .++||+|+ |.+|...+..+... . +|+.++++.++.+.+.+ +.....+  |..+.     ..++++..+  ++|.||
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~~~id~vi   76 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDP-----EAIAAAVEQLGRLDVLV   76 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCH-----HHHHHHHHhcCCCCEEE
Confidence            57999986 99999998877655 6 78888888776554432 2111122  22221     223333322  699999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      .+.|.
T Consensus        77 ~~ag~   81 (227)
T PRK08219         77 HNAGV   81 (227)
T ss_pred             ECCCc
Confidence            98874

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=92.94  E-value=0.52  Score=40.34  Aligned_cols=74  Identities=26%  Similarity=0.317  Sum_probs=46.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce---eeCCCCCCchHHHHHHhhhc--CCccE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVDR  217 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d~  217 (329)
                      +++++||+|+ |.+|...+..+...|+ +|+.++++.     .+..+...   ..|..+. +.+.+.+.+...  +.+|+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDA-AAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            3689999986 9999999998888898 788887665     12222211   1122221 123333333322  36899


Q ss_pred             EEEecCC
Q 047713          218 SVECTGS  224 (329)
Q Consensus       218 Vid~~g~  224 (329)
                      +|.+.|.
T Consensus        80 vi~~ag~   86 (252)
T PRK08220         80 LVNAAGI   86 (252)
T ss_pred             EEECCCc
Confidence            9998874

>PRK06701 short chain dehydrogenase; Provisional

Probab=92.93  E-value=0.78  Score=40.50  Aligned_cols=80  Identities=24%  Similarity=0.173  Sum_probs=47.1

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hH----HHHHhcCCce---eeCCCCCCchHHHHHHhhhc-
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS-RF----NEAKKFGVTE---FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~-~~----~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      -++.++||+|+ |.+|..++..+...|+ +|+.+.++.+ ..    +.++..+...   ..|..+. ....+.+++... 
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~i~~~  121 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDE-AFCKDAVEETVRE  121 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHH
Confidence            34789999986 9999999998888898 6777766532 11    1222233222   1222221 123333333322 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|++|.+.|.
T Consensus       122 ~~~iD~lI~~Ag~  134 (290)
T PRK06701        122 LGRLDILVNNAAF  134 (290)
T ss_pred             cCCCCEEEECCcc
Confidence             368999988773

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=92.92  E-value=1.6  Score=38.58  Aligned_cols=70  Identities=17%  Similarity=0.189  Sum_probs=48.4

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ  226 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~  226 (329)
                      +|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|....-     +  ..+.++     ..|+||.++....
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~-----~--~~~~~~-----~aDivi~~vp~~~   67 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTAE-----T--ARQVTE-----QADVIFTMVPDSP   67 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCcccC-----C--HHHHHh-----cCCEEEEecCCHH
Confidence            36788999999988888888898 899999999988888777653211     1  212221     3688888876543


Q ss_pred             HHH
Q 047713          227 AMI  229 (329)
Q Consensus       227 ~~~  229 (329)
                      ...
T Consensus        68 ~~~   70 (291)
T TIGR01505        68 QVE   70 (291)
T ss_pred             HHH
Confidence            333

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=92.92  E-value=0.73  Score=39.80  Aligned_cols=79  Identities=23%  Similarity=0.183  Sum_probs=47.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHH----HHHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFN----EAKKFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~----~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+.+ +++..+    .++..+...   ..|..+.. +..+.+.....  
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~   83 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVES-DVVNLIQTAVKEF   83 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHH-HHHHHHHHHHHHc
Confidence            4789999986 9999999999989998 5655544 333322    223333321   22333221 23333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|+++.+.|.
T Consensus        84 g~id~lv~~ag~   95 (261)
T PRK08936         84 GTLDVMINNAGI   95 (261)
T ss_pred             CCCCEEEECCCC
Confidence            369999998874

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=92.91  E-value=1.1  Score=40.42  Aligned_cols=97  Identities=21%  Similarity=0.269  Sum_probs=61.7

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhh--hcCCccEEEE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADM--TNGGVDRSVE  220 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~--~~~~~d~Vid  220 (329)
                      .++.+||-+|+|. |..+..+++..+..+|++++.+++..+.+++.....-+.....+      +.++  ..+.+|+|+.
T Consensus       112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD------~e~lp~~~~sFDvVIs  184 (340)
T PLN02490        112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGD------AEDLPFPTDYADRYVS  184 (340)
T ss_pred             CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEecc------HHhCCCCCCceeEEEE
Confidence            4678898888765 77777778776545899999998887777664211111111111      1222  1236998875


Q ss_pred             ecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          221 CTG------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       221 ~~g------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +..      ....++.+.+.|+++ |+++.++.
T Consensus       185 ~~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~  216 (340)
T PLN02490        185 AGSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP  216 (340)
T ss_pred             cChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            421      134577888999998 99887754

>PRK13243 glyoxylate reductase; Reviewed

Probab=92.87  E-value=1.4  Score=39.82  Aligned_cols=36  Identities=31%  Similarity=0.486  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS  180 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~  180 (329)
                      .|++|.|+|.|.+|...++.++.+|. +|++.+++.+
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~  184 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRK  184 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCC
Confidence            58899999999999999999999999 8988887654

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=92.83  E-value=1.5  Score=39.56  Aligned_cols=96  Identities=18%  Similarity=-0.003  Sum_probs=59.8

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee--C--CCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV--N--PKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~--~--~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      +|.|+|+|.+|.+.+..+...|. .|...++++++.+.+++.+.....  .  ....- .......+.. ...|+||-++
T Consensus         6 ~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~-~~~~~~~e~~-~~aD~Vi~~v   82 (328)
T PRK14618          6 RVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAEL-YPTADPEEAL-AGADFAVVAV   82 (328)
T ss_pred             eEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCe-EEeCCHHHHH-cCCCEEEEEC
Confidence            68899999999999998888888 788888888877766654211100  0  00000 0000111111 2589999999


Q ss_pred             CCHHHHHHHHHhhccCCeEEEEecc
Q 047713          223 GSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       223 g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ... .++..++.++++ -.++.+..
T Consensus        83 ~~~-~~~~v~~~l~~~-~~vi~~~~  105 (328)
T PRK14618         83 PSK-ALRETLAGLPRA-LGYVSCAK  105 (328)
T ss_pred             chH-HHHHHHHhcCcC-CEEEEEee
Confidence            654 567777777775 56665544

>PRK12744 short chain dehydrogenase; Provisional

Probab=92.83  E-value=0.64  Score=40.03  Aligned_cols=79  Identities=22%  Similarity=0.305  Sum_probs=44.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC----hhhH-HH---HHhcCCce---eeCCCCCCchHHHHHHhhh
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN----PSRF-NE---AKKFGVTE---FVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~----~~~~-~~---~~~lg~~~---~~~~~~~~~~~~~~~~~~~  211 (329)
                      .+.++||+|+ |.+|.+++..+...|+ +|+.+..+    .++. +.   ++..+...   ..|..+. ++..+.+.+..
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~-~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~   84 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGA-KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTA-AAVEKLFDDAK   84 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCH-HHHHHHHHHHH
Confidence            3678999986 9999999998888898 54444322    1222 12   22233321   1233221 12333333332


Q ss_pred             c--CCccEEEEecCC
Q 047713          212 N--GGVDRSVECTGS  224 (329)
Q Consensus       212 ~--~~~d~Vid~~g~  224 (329)
                      .  +++|++|.+.|.
T Consensus        85 ~~~~~id~li~~ag~   99 (257)
T PRK12744         85 AAFGRPDIAINTVGK   99 (257)
T ss_pred             HhhCCCCEEEECCcc
Confidence            2  368999998874

>PRK14982 acyl-ACP reductase; Provisional

Probab=92.78  E-value=0.65  Score=41.91  Aligned_cols=93  Identities=17%  Similarity=0.212  Sum_probs=59.1

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHH-HcCCCEEEEEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGAR-VSGASRIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~-~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      -.+.+|+|+|+ |.+|..++..+. ..|...++.+.++.++.+.+ ++++...          .. .+.+.. ...|+|+
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~----------i~-~l~~~l-~~aDiVv  220 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGK----------IL-SLEEAL-PEADIVV  220 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcccc----------HH-hHHHHH-ccCCEEE
Confidence            35789999998 999999988775 45666888888887776654 3343111          11 122222 2489999


Q ss_pred             EecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          220 ECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       220 d~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      .+++.+..+..-.+.+++. -.++.++.+
T Consensus       221 ~~ts~~~~~~I~~~~l~~~-~~viDiAvP  248 (340)
T PRK14982        221 WVASMPKGVEIDPETLKKP-CLMIDGGYP  248 (340)
T ss_pred             ECCcCCcCCcCCHHHhCCC-eEEEEecCC
Confidence            9987654432222345665 677777754

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=92.70  E-value=0.77  Score=39.05  Aligned_cols=77  Identities=16%  Similarity=0.095  Sum_probs=46.0

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhh--cCC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIG-VDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMT--NGG  214 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~-~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~--~~~  214 (329)
                      .++||+|+ |.+|.+.+..+...|+ .|+. ..+++++.+.    ++..+...   ..|..+. +...+.+++..  .++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDE-NQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCH-HHHHHHHHHHHHhCCC
Confidence            37899987 9999999998888898 5654 4455544322    22233211   1233222 12444444433  237


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|.+.|.
T Consensus        80 id~vi~~ag~   89 (247)
T PRK09730         80 LAALVNNAGI   89 (247)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=92.68  E-value=0.46  Score=35.34  Aligned_cols=97  Identities=24%  Similarity=0.311  Sum_probs=56.0

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      |.+||-.|+| .|..++.+++.. ...+++++.++...+.++..    +.+.-+.....  ++.+....+..+.+|+|+-
T Consensus         1 g~~vlD~~~G-~G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~--D~~~~~~~~~~~~~D~Iv~   76 (117)
T PF13659_consen    1 GDRVLDPGCG-SGTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVG--DARDLPEPLPDGKFDLIVT   76 (117)
T ss_dssp             TEEEEEETST-TCHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEES--HHHHHHHTCTTT-EEEEEE
T ss_pred             CCEEEEcCcc-hHHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEEC--chhhchhhccCceeEEEEE
Confidence            4567777553 244455555544 44999999999988877652    22110111111  2444443344458999974


Q ss_pred             ecCC--------------HHHHHHHHHhhccCCeEEEEec
Q 047713          221 CTGS--------------VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       221 ~~g~--------------~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .-..              ...++.+.++|+++ |.++.+-
T Consensus        77 npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~~  115 (117)
T PF13659_consen   77 NPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFIT  115 (117)
T ss_dssp             --STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEEe
Confidence            2211              23477888999998 9887763

...

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=92.66  E-value=4.4  Score=33.95  Aligned_cols=92  Identities=16%  Similarity=0.163  Sum_probs=56.7

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh-hhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP-SRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~-~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      .|..|||.|+|.+|.-=+.++...|+ +|++++.+- ..+. +.++.+...+ . ...+    .  ..+  .++++||-+
T Consensus        11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~-~-~~~~----~--~~~--~~~~lviaA   79 (210)
T COG1648          11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWI-E-REFD----A--EDL--DDAFLVIAA   79 (210)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchh-h-cccC----h--hhh--cCceEEEEe
Confidence            47899999999999999999999999 777775544 2222 2333221111 1 1111    0  000  148899999


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          222 TGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ++.+..-+...+.+... +.++-...
T Consensus        80 t~d~~ln~~i~~~a~~~-~i~vNv~D  104 (210)
T COG1648          80 TDDEELNERIAKAARER-RILVNVVD  104 (210)
T ss_pred             CCCHHHHHHHHHHHHHh-CCceeccC
Confidence            97755555555566665 77766654

>PLN02256 arogenate dehydrogenase

Probab=92.65  E-value=1.3  Score=39.53  Aligned_cols=93  Identities=16%  Similarity=0.180  Sum_probs=57.6

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      ..-..+.+|.|+|.|.+|...+..++..|. .|++++.++. .+.++++|...   ..+    ..+.+    ....|+||
T Consensus        31 ~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~~----~~e~~----~~~aDvVi   97 (304)
T PLN02256         31 LEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FRD----PDDFC----EEHPDVVL   97 (304)
T ss_pred             hccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eCC----HHHHh----hCCCCEEE
Confidence            333456789999999999998888888887 7888887764 35566677632   111    21111    12478988


Q ss_pred             EecCCHHHHHHHHHh-----hccCCeEEEEecc
Q 047713          220 ECTGSVQAMISAFEC-----VHDGWGVAVLVGV  247 (329)
Q Consensus       220 d~~g~~~~~~~~~~~-----l~~~~G~vv~~g~  247 (329)
                      -|+.. ..+...++-     +.++ ..++.++.
T Consensus        98 lavp~-~~~~~vl~~l~~~~l~~~-~iviDv~S  128 (304)
T PLN02256         98 LCTSI-LSTEAVLRSLPLQRLKRS-TLFVDVLS  128 (304)
T ss_pred             EecCH-HHHHHHHHhhhhhccCCC-CEEEecCC
Confidence            88854 333433332     3344 55666655

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=92.64  E-value=0.85  Score=38.74  Aligned_cols=77  Identities=19%  Similarity=0.282  Sum_probs=45.2

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcC---Cce-e--eCCCCCCchHHHHHHhhhc--CC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS--RFNEAKKFG---VTE-F--VNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~--~~~~~~~lg---~~~-~--~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +++||+|+ |.+|..+++.+...|. +|+.+.++..  ..+....+.   ... .  .|..+. +...+.+++...  +.
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDT-EECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCC
Confidence            47899986 9999999998888898 7888877643  122222222   111 1  122221 123333333322  36


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|.+.|.
T Consensus        81 id~vi~~ag~   90 (245)
T PRK12824         81 VDILVNNAGI   90 (245)
T ss_pred             CCEEEECCCC
Confidence            9999998873

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=92.64  E-value=0.87  Score=41.80  Aligned_cols=34  Identities=24%  Similarity=0.393  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      ..+|+|.|+|++|..+++.+...|..++..++.+
T Consensus        41 ~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         41 NARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            5689999999999999999999999888888775

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=92.64  E-value=0.63  Score=39.48  Aligned_cols=77  Identities=18%  Similarity=0.223  Sum_probs=45.0

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHH-HHHhc---CCc---eeeCCCCCCchHHHHHHhhhc--CC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFN-EAKKF---GVT---EFVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~-~~~~l---g~~---~~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +++||+|+ |.+|..++..+...|+ +|+++.+ ++++.+ ...++   +..   ...|..+. .++.+.+.++..  +.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSF-ESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCH-HHHHHHHHHHHHHcCC
Confidence            46899986 9999999999888999 6776655 443332 22222   211   11222221 123333333322  36


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|+||.+.|.
T Consensus        79 id~vi~~ag~   88 (242)
T TIGR01829        79 IDVLVNNAGI   88 (242)
T ss_pred             CcEEEECCCC
Confidence            8999999873

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=92.61  E-value=0.5  Score=40.37  Aligned_cols=106  Identities=22%  Similarity=0.369  Sum_probs=61.7

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCcee--eCCCCCCchHHHHHHh
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEF--VNPKDYDKPVQQVIAD  209 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~--~~~~~~~~~~~~~~~~  209 (329)
                      ......++|++||=.|+| +|..+..+++..+. .+|++++.+++-++.+++    .+...+  +..+..+  +     .
T Consensus        40 ~~~~~~~~g~~vLDv~~G-tG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~--l-----p  111 (233)
T PF01209_consen   40 IKLLGLRPGDRVLDVACG-TGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAED--L-----P  111 (233)
T ss_dssp             HHHHT--S--EEEEET-T-TSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB---------
T ss_pred             HhccCCCCCCEEEEeCCC-hHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHH--h-----c
Confidence            444567889999988765 47788888887653 389999999998877664    222111  1000000  0     1


Q ss_pred             hhcCCccEEEEecCC------HHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          210 MTNGGVDRSVECTGS------VQAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       210 ~~~~~~d~Vid~~g~------~~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      ...+.+|+|.-+.|-      ...+....+.|+|+ |+++.+......
T Consensus       112 ~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~p~  158 (233)
T PF01209_consen  112 FPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSKPR  158 (233)
T ss_dssp             S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB-S
T ss_pred             CCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccCCC
Confidence            112369999877763      34678888999998 999888764443

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PLN02928 oxidoreductase family protein

Probab=92.59  E-value=1.3  Score=40.24  Aligned_cols=34  Identities=29%  Similarity=0.547  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      .|.+|.|+|.|.+|..+++.++.+|. +|++.+++
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~  191 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRS  191 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCC
Confidence            58899999999999999999999999 89998775

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=92.57  E-value=0.81  Score=39.03  Aligned_cols=79  Identities=18%  Similarity=0.191  Sum_probs=46.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHH-H---HHhcCCce-e--eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD-LNPSRFN-E---AKKFGVTE-F--VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~-~~~~~~~-~---~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .+++++|+|+ |.+|..++..+...|+ .|+.+. +++++.+ .   +++.+... .  .|..+. ..+.+.+++...  
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   82 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKV-EDANRLVEEAVNHF   82 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            3789999986 9999999998888898 565543 3333332 2   22233221 1  122221 123334444332  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +.+|+||.+.|.
T Consensus        83 ~~id~vi~~ag~   94 (247)
T PRK12935         83 GKVDILVNNAGI   94 (247)
T ss_pred             CCCCEEEECCCC
Confidence            368999998874

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=92.46  E-value=0.91  Score=38.51  Aligned_cols=104  Identities=16%  Similarity=0.223  Sum_probs=64.7

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcCCc----eeeCCCCCCchHHHHHHhhhc
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKKFGVT----EFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~lg~~----~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      ......++.+||-.|+|. |..+..+++..+ ..++++++.+++..+.+++.-..    ..+.....+  ....  ....
T Consensus        45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~--~~~~  119 (239)
T PRK00216         45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGD--AEAL--PFPD  119 (239)
T ss_pred             HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecc--cccC--CCCC
Confidence            334456788999999876 788888888775 23899999999887777664211    111111111  1110  0112


Q ss_pred             CCccEEEEecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          213 GGVDRSVECTG------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       213 ~~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +.+|+|+-...      ....+..+.++|+++ |.++.+..
T Consensus       120 ~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~  159 (239)
T PRK00216        120 NSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEF  159 (239)
T ss_pred             CCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEe
Confidence            36898874321      234567888899998 99887754

>PRK07340 ornithine cyclodeaminase; Validated

Probab=92.44  E-value=0.58  Score=41.73  Aligned_cols=96  Identities=16%  Similarity=0.095  Sum_probs=62.1

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHH-HcCCCEEEEEcCChhhHHH-HHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGAR-VSGASRIIGVDLNPSRFNE-AKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~-~~G~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      ....+++|+|+|..|.+.+..+. ..+.+++....+++++.+. ++++.... +.....+  ..+.+     .+.|+|+.
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~-~~~~~~~--~~~av-----~~aDiVit  194 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALG-PTAEPLD--GEAIP-----EAVDLVVT  194 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcC-CeeEECC--HHHHh-----hcCCEEEE
Confidence            45679999999999998888775 4687789999988877654 44443210 0000011  32232     25899999


Q ss_pred             ecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          221 CTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       221 ~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      ++.+...+-..+  ++++ -++..+|...
T Consensus       195 aT~s~~Pl~~~~--~~~g-~hi~~iGs~~  220 (304)
T PRK07340        195 ATTSRTPVYPEA--ARAG-RLVVAVGAFT  220 (304)
T ss_pred             ccCCCCceeCcc--CCCC-CEEEecCCCC
Confidence            987654433333  6776 7888888643

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=92.43  E-value=1  Score=41.34  Aligned_cols=80  Identities=26%  Similarity=0.232  Sum_probs=45.8

Q ss_pred             CCCCeEEEEcC-CHHHHH--HHHHHHHcCCCEEEEEcCCh---h-------------hHHHHHhcCCce-ee--CCCCCC
Q 047713          143 KKGQSVAIFGL-GAVGLA--AAEGARVSGASRIIGVDLNP---S-------------RFNEAKKFGVTE-FV--NPKDYD  200 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~a--ai~la~~~G~~~vv~~~~~~---~-------------~~~~~~~lg~~~-~~--~~~~~~  200 (329)
                      ..++++||+|+ +++|++  +++.+ ..|+ .+++++...   +             -.+.++++|... .+  |..+. 
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~-  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSD-  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCH-
Confidence            34678999986 899999  45555 7898 666665321   1             123455566432 22  22221 


Q ss_pred             chHHHHHHhhhc--CCccEEEEecCCH
Q 047713          201 KPVQQVIADMTN--GGVDRSVECTGSV  225 (329)
Q Consensus       201 ~~~~~~~~~~~~--~~~d~Vid~~g~~  225 (329)
                      +...+.+.++..  |++|+++++.+.+
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            122233333322  4799999999865

>PRK10901 16S rRNA methyltransferase B; Provisional

Probab=92.43  E-value=1.7  Score=40.83  Aligned_cols=102  Identities=16%  Similarity=0.319  Sum_probs=60.9

Q ss_pred             ccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhh-cC
Q 047713          139 VAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMT-NG  213 (329)
Q Consensus       139 ~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~-~~  213 (329)
                      ...+++|++||=.|+|+ |..++.+++..+...|++++.++++.+.++    ++|....+...+    ..+ +.... .+
T Consensus       239 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D----~~~-~~~~~~~~  312 (427)
T PRK10901        239 LLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGD----ARD-PAQWWDGQ  312 (427)
T ss_pred             HcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcC----ccc-chhhcccC
Confidence            45678899998887643 445556666554238999999998877664    345432111111    111 11111 23


Q ss_pred             CccEEE-E--ecCC-------------------------HHHHHHHHHhhccCCeEEEEecc
Q 047713          214 GVDRSV-E--CTGS-------------------------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       214 ~~d~Vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+|.|+ |  |+|.                         ...+..+.+.|+++ |+++....
T Consensus       313 ~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpG-G~lvystc  373 (427)
T PRK10901        313 PFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPG-GTLLYATC  373 (427)
T ss_pred             CCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeC
Confidence            699987 2  3331                         13577888899998 99886643

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=92.39  E-value=0.17  Score=35.83  Aligned_cols=84  Identities=23%  Similarity=0.351  Sum_probs=52.0

Q ss_pred             EcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce---eeCCCCCCchHHHHHHhhhcCCccEEEEecC----
Q 047713          151 FGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE---FVNPKDYDKPVQQVIADMTNGGVDRSVECTG----  223 (329)
Q Consensus       151 ~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g----  223 (329)
                      .|+| .|..+..+++. +...|++++.+++..+.+++.....   ....+..+      + ....+.+|+|+....    
T Consensus         3 iG~G-~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~------l-~~~~~sfD~v~~~~~~~~~   73 (95)
T PF08241_consen    3 IGCG-TGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAED------L-PFPDNSFDVVFSNSVLHHL   73 (95)
T ss_dssp             ET-T-TSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTS------S-SS-TT-EEEEEEESHGGGS
T ss_pred             ecCc-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehHHh------C-ccccccccccccccceeec
Confidence            4555 68888888888 4449999999999888887754432   11111111      0 122237999975432    


Q ss_pred             --CHHHHHHHHHhhccCCeEEEE
Q 047713          224 --SVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       224 --~~~~~~~~~~~l~~~~G~vv~  244 (329)
                        ....+..+.+.|+++ |.++.
T Consensus        74 ~~~~~~l~e~~rvLk~g-G~l~~   95 (95)
T PF08241_consen   74 EDPEAALREIYRVLKPG-GRLVI   95 (95)
T ss_dssp             SHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             cCHHHHHHHHHHHcCcC-eEEeC
Confidence              224568888899998 98763

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=92.37  E-value=0.46  Score=45.24  Aligned_cols=75  Identities=17%  Similarity=0.201  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-----hcCCc----eeeCCCCCCchHHHHHHhhhcC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-----KFGVT----EFVNPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-----~lg~~----~~~~~~~~~~~~~~~~~~~~~~  213 (329)
                      .|++|||+|+ |.+|...+.-....+.++++..++++.++..++     .++..    .+-|..+.     +.+.+...+
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~-----~~~~~~~~~  323 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDR-----DRVERAMEG  323 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccH-----HHHHHHHhc
Confidence            5999999987 999987776555558889999999998765442     22311    12233332     345555566


Q ss_pred             -CccEEEEecC
Q 047713          214 -GVDRSVECTG  223 (329)
Q Consensus       214 -~~d~Vid~~g  223 (329)
                       ++|+||.++.
T Consensus       324 ~kvd~VfHAAA  334 (588)
T COG1086         324 HKVDIVFHAAA  334 (588)
T ss_pred             CCCceEEEhhh
Confidence             8999998774

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=92.36  E-value=1.3  Score=41.77  Aligned_cols=104  Identities=18%  Similarity=0.377  Sum_probs=60.9

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhhc
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      ....++++++||=.|+|+ |..++.+++.. +..+|++++.++++.+.++    ++|...+ .....+  ..+....+ .
T Consensus       244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v-~~~~~D--~~~~~~~~-~  318 (444)
T PRK14902        244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNI-ETKALD--ARKVHEKF-A  318 (444)
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeE-EEEeCC--cccccchh-c
Confidence            345678899988887643 44455556554 2338999999998877654    3565431 111111  11111111 1


Q ss_pred             CCccEEE-E--ecCC-------------------------HHHHHHHHHhhccCCeEEEEecc
Q 047713          213 GGVDRSV-E--CTGS-------------------------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       213 ~~~d~Vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +.+|.|+ |  |+|.                         ...+..+.+.|+++ |+++....
T Consensus       319 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvystc  380 (444)
T PRK14902        319 EKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKG-GILVYSTC  380 (444)
T ss_pred             ccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEcC
Confidence            4689986 3  3332                         13567788899998 99886543

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=92.36  E-value=0.52  Score=41.64  Aligned_cols=36  Identities=19%  Similarity=0.357  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      ++++++|+|+|+.+.+++..+...|+++++.+.+++
T Consensus       123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~  158 (288)
T PRK12749        123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD  158 (288)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            578999999999999888877788988898888874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	329
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		1e-103
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		1e-102
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		3e-88
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		3e-88
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		3e-88
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		2e-87
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		3e-86
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		7e-86
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		1e-85
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		1e-85
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		3e-85
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		3e-85
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		3e-85
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		4e-85
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		8e-85
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		8e-85
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		8e-85
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		3e-84
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		7e-84
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		8e-84
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		9e-84
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		1e-82
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		2e-82
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		5e-82
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		1e-80
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		1e-77
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		2e-75
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		2e-75
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		4e-74
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		5e-74
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		7e-70
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		4e-29
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		8e-18
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		1e-17
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		4e-16
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		2e-15
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		6e-12
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		6e-12
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		8e-12
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		3e-11
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		8e-11
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		9e-11
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		9e-11
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		1e-10
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-10
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		1e-10
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		3e-10
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		3e-10
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		3e-10
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		4e-10
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		6e-10
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-09
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		1e-09
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-09
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		2e-09
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		2e-09
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		2e-09
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		3e-09
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		3e-09
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		4e-09
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		2e-08
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		5e-08
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		3e-07
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		5e-07
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		2e-06
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		5e-06
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		5e-05
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		7e-05
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		8e-05
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		2e-04
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		2e-04
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		3e-04

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  371 bits (952), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 172/314 (54%), Positives = 223/314 (71%)
Query: 12  LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTD 71
           LFP I GHEA GIVESVGEGVT++Q GDHV+P +  EC+EC  C S ++N+C  +R  T 
Sbjct: 61  LFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATG 120
Query: 72  RGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 131
            G+M+ND +SRFS+ GKPIYHF+GTSTFS+YTV H   VAKI+P APLDKVC+L CG+ T
Sbjct: 121 VGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPT 180
Query: 132 GFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVT 191
           G GA  N AK + G +VAIF             + +GASRIIG+D++  ++  AKKFGV 
Sbjct: 181 GLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN 240
Query: 192 EFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251
           EFVNPKD+DKP+Q+VI D+T+GGVD S EC G+V  M +A EC H GWG +V+VGV    
Sbjct: 241 EFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 300
Query: 252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA 311
               T P  L+  R  KGT FG +K R+ +P +VEKYMNKE++V+++ITH +   EINKA
Sbjct: 301 QEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKA 360
Query: 312 FDLMLAGESIRCII 325
           FDL+  G  +RC++
Sbjct: 361 FDLLHEGTCLRCVL 374

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  368 bits (944), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 170/316 (53%), Positives = 226/316 (71%)
Query: 12  LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTD 71
           LFP + GHEA GIVESVGEGVT++QPGDHV+P +  EC+EC  C S ++N+C  +R  T 
Sbjct: 79  LFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 138
Query: 72  RGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 131
            GVM+ND +SRFSI GKPIYHF+GTSTFS+YTV H   VAKI+P APL+KVC+L CG+ T
Sbjct: 139 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPT 198
Query: 132 GFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVT 191
           G GA  N AK + G  VA+F             + +GASRIIG+D++  +F+ AK FGVT
Sbjct: 199 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVT 258
Query: 192 EFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD 251
           EF+NPK++++P+QQVI D+T+GGVD S EC G+V  M SA EC H GWG +V+VGV    
Sbjct: 259 EFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASG 318
Query: 252 DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA 311
               T P  L+  R  KGT FG +K RS +PS+V+KY+ KE++V+++ITH +  ++INKA
Sbjct: 319 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLADINKA 378
Query: 312 FDLMLAGESIRCIIRM 327
           FDLM  G+ +R ++ M
Sbjct: 379 FDLMHDGDCLRVVLDM 394

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  321 bits (823), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 160/315 (50%), Positives = 220/315 (69%), Gaps = 1/315 (0%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +
Sbjct: 61  FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGISTG
Sbjct: 121 GLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 179
Query: 133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           +GA VN AK + G   A+F             +V+GASRIIGVD+N  +F  AK+FG TE
Sbjct: 180 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 239
Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
            +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +
Sbjct: 240 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 299
Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
              T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH + F EINKAF
Sbjct: 300 EIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAF 359
Query: 313 DLMLAGESIRCIIRM 327
           +LM +G+SIR ++++
Sbjct: 360 ELMHSGKSIRTVVKI 374

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  321 bits (823), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 160/315 (50%), Positives = 220/315 (69%), Gaps = 1/315 (0%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +
Sbjct: 60  FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 119
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGISTG
Sbjct: 120 GLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 178
Query: 133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           +GA VN AK + G   A+F             +V+GASRIIGVD+N  +F  AK+FG TE
Sbjct: 179 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 238
Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
            +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +
Sbjct: 239 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 298
Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
              T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH + F EINKAF
Sbjct: 299 EIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAF 358
Query: 313 DLMLAGESIRCIIRM 327
           +LM +G+SIR ++++
Sbjct: 359 ELMHSGKSIRTVVKI 373

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  321 bits (823), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 160/315 (50%), Positives = 220/315 (69%), Gaps = 1/315 (0%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +
Sbjct: 61  FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGISTG
Sbjct: 121 GLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 179
Query: 133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           +GA VN AK + G   A+F             +V+GASRIIGVD+N  +F  AK+FG TE
Sbjct: 180 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 239
Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
            +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +
Sbjct: 240 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 299
Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
              T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH + F EINKAF
Sbjct: 300 EIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAF 359
Query: 313 DLMLAGESIRCIIRM 327
           +LM +G+SIR ++++
Sbjct: 360 ELMHSGKSIRTVVKI 374

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  318 bits (816), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 159/315 (50%), Positives = 219/315 (69%), Gaps = 1/315 (0%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP I GH   GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +
Sbjct: 60  FPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 119
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGISTG
Sbjct: 120 GLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 178
Query: 133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           +GA VN AK + G   A+F             +V+GASRIIGVD+N  +F  AK+FG TE
Sbjct: 179 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 238
Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
            +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +
Sbjct: 239 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 298
Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
              T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH + F EINKAF
Sbjct: 299 EIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAF 358
Query: 313 DLMLAGESIRCIIRM 327
           +LM +G+SIR ++++
Sbjct: 359 ELMHSGKSIRTVVKI 373

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  314 bits (805), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 153/316 (48%), Positives = 212/316 (67%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVES+GEGVT ++PGD V+P+FT +C +C  C   E N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ V VAK  +G + A+F             + +GA+RIIGVD+N  RF +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +GESIR I+
Sbjct: 357 EGFDLLRSGESIRTIL 372

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  313 bits (803), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 152/316 (48%), Positives = 212/316 (67%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVES+GEGVT ++PGD V+P+FT +C +C  C   E N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ V VAK  +G + A+F             + +GA+RIIGVD+N  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +GESIR I+
Sbjct: 357 EGFDLLRSGESIRTIL 372

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  313 bits (801), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 152/316 (48%), Positives = 212/316 (67%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVES+GEGVT ++PGD V+P+FT +C +C  C   E N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ V VAK  +G + A+F             + +GA+RIIGVD+N  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +GESIR I+
Sbjct: 357 EGFDLLRSGESIRTIL 372

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  312 bits (800), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 152/316 (48%), Positives = 212/316 (67%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVES+GEGVT ++PGD V+P+FT +C +C  C   E N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ V VAK  +G + A+F             + +GA+RIIGVD+N  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +GESIR I+
Sbjct: 357 EGFDLLRSGESIRTIL 372

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  311 bits (798), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/316 (47%), Positives = 211/316 (66%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVES+GEGVT ++PGD V+P+FT +C +C  C   E N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ V VAK  +G + A+F             + +GA+RIIGVD+N  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  + +GV+V+ GVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +GESIR I+
Sbjct: 357 EGFDLLRSGESIRTIL 372

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  311 bits (797), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/316 (47%), Positives = 212/316 (67%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVES+GEGVT ++PGD V+P++T +C +C  C   E N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ V VAK  +G + A+F             + +GA+RIIGVD+N  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +GESIR I+
Sbjct: 357 EGFDLLRSGESIRTIL 372

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  311 bits (797), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/316 (47%), Positives = 212/316 (67%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVES+GEGVT ++PGD V+P++T +C +C  C   E N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ V VAK  +G + A+F             + +GA+RIIGVD+N  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +GESIR I+
Sbjct: 357 EGFDLLRSGESIRTIL 372

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  311 bits (796), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 151/316 (47%), Positives = 211/316 (66%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVES+GEGVT ++PGD V+P+FT +C +C  C   E N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ V VAK  +G + A+F             + +GA+RIIGVD+N  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  + +GV+V+ GVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +GESIR I+
Sbjct: 357 EGFDLLRSGESIRTIL 372

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  310 bits (794), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 151/316 (47%), Positives = 211/316 (66%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVES+GEGVT ++PGD V+P+ T +C +C  C   E N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ V VAK  +G + A+F             + +GA+RIIGVD+N  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +GESIR I+
Sbjct: 357 EGFDLLRSGESIRTIL 372

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  310 bits (793), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 148/313 (47%), Positives = 210/313 (67%), Gaps = 2/313 (0%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
            P I GHEA GIVES+GEGVT ++PGD V+P+F  +C +C  C   E N+C L  ++  R
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC-LKNLSMPR 119
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           G M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG STG
Sbjct: 120 GTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTG 178
Query: 133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           +G+ V VAK  +G + A+F             + +GA+RIIGVD+N  +F +AK+ G TE
Sbjct: 179 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 238
Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
            VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  + +GV+V+VGVP    
Sbjct: 239 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQ 298
Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
               +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  ITH +PF +IN+ F
Sbjct: 299 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 358
Query: 313 DLMLAGESIRCII 325
           DL+ +G+SIR I+
Sbjct: 359 DLLRSGKSIRTIL 371

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  310 bits (793), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 148/313 (47%), Positives = 210/313 (67%), Gaps = 2/313 (0%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
            P I GHEA GIVES+GEGVT ++PGD V+P+F  +C +C  C   E N+C L  ++  R
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC-LKNLSMPR 119
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           G M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG STG
Sbjct: 120 GTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTG 178
Query: 133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           +G+ V VAK  +G + A+F             + +GA+RIIGVD+N  +F +AK+ G TE
Sbjct: 179 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 238
Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
            VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  + +GV+V+VGVP    
Sbjct: 239 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQ 298
Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
               +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  ITH +PF +IN+ F
Sbjct: 299 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 358
Query: 313 DLMLAGESIRCII 325
           DL+ +G+SIR I+
Sbjct: 359 DLLRSGKSIRTIL 371

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  308 bits (789), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 150/316 (47%), Positives = 210/316 (66%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVES+GEGVT ++PGD V+P+FT +C +C  C   E N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ V VAK  +G + A+F             + +GA+RIIGVD+N  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  + +GV+V+V V  
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +GESIR I+
Sbjct: 357 EGFDLLRSGESIRTIL 372

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  306 bits (785), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 147/316 (46%), Positives = 209/316 (66%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVESVGEGVT ++PGD V+P+FT +C +C  C + ESN C    + 
Sbjct: 59  TPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLG 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG +  DG  RF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 NPRGTL-QDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ VNVAK   G + A+F             + +GA+RII VD+N  +F +AK+ G
Sbjct: 177 STGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE +NP+DY KP+Q+V+ +MT+GGVD S E  G +  M+++  C H+  G +V+VGVP 
Sbjct: 237 ATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL  RT KG  +G +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 ASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +G+SIR ++
Sbjct: 357 EGFDLLHSGKSIRTVL 372

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  306 bits (785), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 147/316 (46%), Positives = 209/316 (66%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVESVGEGVT ++PGD V+P+FT +C +C  C + ESN C    + 
Sbjct: 59  TPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLG 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG +  DG  RF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 NPRGTL-QDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ VNVAK   G + A+F             + +GA+RII VD+N  +F +AK+ G
Sbjct: 177 STGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE +NP+DY KP+Q+V+ +MT+GGVD S E  G +  M+++  C H+  G +V+VGVP 
Sbjct: 237 ATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL  RT KG  +G +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 ASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +G+SIR ++
Sbjct: 357 EGFDLLHSGKSIRTVL 372

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  306 bits (785), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 147/316 (46%), Positives = 209/316 (66%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVESVGEGVT ++PGD V+P+FT +C +C  C + ESN C    + 
Sbjct: 59  TPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLG 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG +  DG  RF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 NPRGTL-QDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ VNVAK   G + A+F             + +GA+RII VD+N  +F +AK+ G
Sbjct: 177 STGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE +NP+DY KP+Q+V+ +MT+GGVD S E  G +  M+++  C H+  G +V+VGVP 
Sbjct: 237 ATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL  RT KG  +G +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 ASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +G+SIR ++
Sbjct: 357 EGFDLLHSGKSIRTVL 372

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  303 bits (775), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 146/312 (46%), Positives = 206/312 (66%), Gaps = 2/312 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVESVGEGVT ++PGD V+P+FT +C +C  C + ESN C    + 
Sbjct: 59  TPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLG 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG +  DG  RF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 NPRGTL-QDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ VNVAK   G + A+F             + +GA+RII VD+N  +F +AK+ G
Sbjct: 177 STGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE +NP+DY KP+Q+V+ +MT+GGVD S E  G +  M+++  C H+  G +V+VGVP 
Sbjct: 237 ATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL  RT KG  +G +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 ASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKIN 356
Query: 310 KAFDLMLAGESI 321
           + FDL+ +G+SI
Sbjct: 357 EGFDLLHSGKSI 368

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  301 bits (772), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 146/316 (46%), Positives = 206/316 (65%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVESVGEGVT ++PGD V+P+FT +C +C  C + ESN C    + 
Sbjct: 59  TPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLG 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             RG +  DG  RF+  GKPI+HFVG STFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 NPRGTL-QDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ V VAK   G + A+F             + +GA+RII VD+N  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE +NP+DY KP+Q+V+ +MT+GGVD S E  G +  M+++  C H+  G +V+VGVP 
Sbjct: 237 ATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL  RT KG  FG +K +  +P +V  +M K+  ++  IT+ +PF +IN
Sbjct: 297 DSQNLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +G+SIR ++
Sbjct: 357 EGFDLLRSGKSIRTVL 372

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  300 bits (769), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 147/315 (46%), Positives = 207/315 (65%), Gaps = 2/315 (0%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP + GHE  GIVESVG GVT+ QPG+ V+P+F  +C EC  C S ++N C     N   
Sbjct: 62  FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESP 121
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
            VM +  ++RF+ KG+ +  F+GTSTFS+YTV +   VAKI+P+APLD VC+L CG+STG
Sbjct: 122 DVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTG 180
Query: 133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           FGA VN AK + G + A+F               +GA RII VDLNP +F +AK FG T+
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240
Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
           FVNP D+ +P+ QV++ MTNGGVD S+EC G+V  M +A E    GWGV+VLVG  +  D
Sbjct: 241 FVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHD 300
Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
              T P+ L+  RT KG+ FG +K +  +P +V+ Y++K++++++FITH +P   +N A 
Sbjct: 301 V-ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAI 359
Query: 313 DLMLAGESIRCIIRM 327
           DLM  G+ IR ++ +
Sbjct: 360 DLMKHGKCIRTVLSL 374

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  296 bits (757), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 144/316 (45%), Positives = 206/316 (65%), Gaps = 2/316 (0%)
Query: 10  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
           TPL P I GHEA GIVESVGEGVT ++PGD V+P+   +C +C  C + ESN C    ++
Sbjct: 59  TPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVS 117
Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
             +G +  DG SRF+ + KPI+HF+G STFS+YTV     VAKI+ A+PL+KVC++ CG 
Sbjct: 118 NPQGTL-QDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGF 176
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           STG+G+ VNVAK   G + A+F             + +GA+RII VD+N  +F +AK+ G
Sbjct: 177 STGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELG 236
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
            TE +NP+DY KP+Q+V+ +MT+GGVD S E  G +  M+++  C H+  G +V+VGVP 
Sbjct: 237 ATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
                  +PM LL  RT KG   G +K +  +P +V  +M K+  ++  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKIN 356
Query: 310 KAFDLMLAGESIRCII 325
           + FDL+ +G+SIR I+
Sbjct: 357 EGFDLLHSGKSIRTIL 372

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  286 bits (732), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 139/317 (43%), Positives = 201/317 (63%), Gaps = 5/317 (1%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMC----DLLRI 68
           FP I GHEA GIVES+G GVT+++PGD V+P++   C++C  C S  +N+C    +L   
Sbjct: 64  FPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSP 123
Query: 69  NTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCG 128
            +D+ +M  D  SRF+ KGKP+YHF GTSTFS+YTV     +AKI+  A L++VC+L CG
Sbjct: 124 ASDQQLM-EDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCG 182
Query: 129 ISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKF 188
            STG+GA +N AK   G + A+F             + +GASRIIG+D+N  +F +AK  
Sbjct: 183 FSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKAL 242
Query: 189 GVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248
           G T+ +NP+D  KP+Q+VI ++T GGVD +++C G  + M +A +C   GWG    +GV 
Sbjct: 243 GATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVA 302
Query: 249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEI 308
                    P  L+  RT+ GTFFG +K    +P +V  Y NK+  ++  +THT+PF +I
Sbjct: 303 AGSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKI 362
Query: 309 NKAFDLMLAGESIRCII 325
           ++AFDLM  G+SIR I+
Sbjct: 363 SEAFDLMNQGKSIRTIL 379

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  279 bits (713), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 137/313 (43%), Positives = 199/313 (63%), Gaps = 2/313 (0%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP I GHEA GIVES+GEGVT ++PGD V+P+F  +C+EC  C + + N+C    I T R
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDI-TGR 119
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           GV+  DG +RF+ KGKP++HF+ TSTF+EYTV     VAKI+ AAP +KVC++ CG STG
Sbjct: 120 GVL-ADGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           +GA V   K K G +  +F             + +GASRIIG+DLN  +F +A   G TE
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
            ++PKD  KP+ +V+++MT   V  + E  G ++ MI A    H  +G +V+VGVP    
Sbjct: 239 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK 298
Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                PM L   RT KG  FG  K R D+P +V +++ K+ ++++ ITH +PF +I++ F
Sbjct: 299 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGF 358
Query: 313 DLMLAGESIRCII 325
           +L+ +G+SIR ++
Sbjct: 359 ELLNSGQSIRTVL 371

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  279 bits (713), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 137/313 (43%), Positives = 199/313 (63%), Gaps = 2/313 (0%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP I GHEA GIVES+GEGVT ++PGD V+P+F  +C+EC  C + + N+C    I T R
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDI-TGR 119
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           GV+  DG +RF+ KGKP++HF+ TSTF+EYTV     VAKI+ AAP +KVC++ CG STG
Sbjct: 120 GVL-ADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           +GA V   K K G +  +F             + +GASRIIG+DLN  +F +A   G TE
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
            ++PKD  KP+ +V+++MT   V  + E  G ++ MI A    H  +G +V+VGVP    
Sbjct: 239 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK 298
Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                PM L   RT KG  FG  K R D+P +V +++ K+ ++++ ITH +PF +I++ F
Sbjct: 299 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGF 358
Query: 313 DLMLAGESIRCII 325
           +L+ +G+SIR ++
Sbjct: 359 ELLNSGQSIRTVL 371

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  274 bits (701), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 133/317 (41%), Positives = 198/317 (62%), Gaps = 5/317 (1%)
Query: 12  LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR---I 68
           LFP + GHE  GIVESVG GVT+ +PGD V+P F  +CK C  C S  +N+C  LR    
Sbjct: 60  LFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKY 119
Query: 69  NTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCG 128
            T    ++ D  SRF+ KG+ IYHF+G S+FS+YTV     +A+++  A L++VC++ CG
Sbjct: 120 PTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCG 179
Query: 129 ISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKF 188
            S+G+GA +N AK   G + A+F             +++GASRII +D+N  +F +AK  
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239
Query: 189 GVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248
           G T+ +NP++ DKPVQ VI ++T GGVD S++C G+ Q + +A +C   GWG   +VG  
Sbjct: 240 GATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA- 298
Query: 249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEI 308
            K D      ++++  R++ GTFFG +K    +P++V  Y NK+ +++  +TH +PF  I
Sbjct: 299 -KVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESI 357
Query: 309 NKAFDLMLAGESIRCII 325
           N A DLM  G+SIR I+
Sbjct: 358 NDAIDLMKEGKSIRTIL 374

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  274 bits (701), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 133/317 (41%), Positives = 198/317 (62%), Gaps = 5/317 (1%)
Query: 12  LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR---I 68
           LFP + GHE  GIVESVG GVT+ +PGD V+P F  +CK C  C S  +N+C  LR    
Sbjct: 60  LFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKY 119
Query: 69  NTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCG 128
            T    ++ D  SRF+ KG+ IYHF+G S+FS+YTV     +A+++  A L++VC++ CG
Sbjct: 120 PTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCG 179
Query: 129 ISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKF 188
            S+G+GA +N AK   G + A+F             +++GASRII +D+N  +F +AK  
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239
Query: 189 GVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248
           G T+ +NP++ DKPVQ VI ++T GGVD S++C G+ Q + +A +C   GWG   +VG  
Sbjct: 240 GATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA- 298
Query: 249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEI 308
            K D      ++++  R++ GTFFG +K    +P++V  Y NK+ +++  +TH +PF  I
Sbjct: 299 -KVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESI 357
Query: 309 NKAFDLMLAGESIRCII 325
           N A DLM  G+SIR I+
Sbjct: 358 NDAIDLMKEGKSIRTIL 374

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  260 bits (665), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 134/313 (42%), Positives = 200/313 (63%), Gaps = 3/313 (0%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP I GHEA G+VES+G GVT ++PGD V+P+F  +C  C  C S  SN C+   +    
Sbjct: 62  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           G+M  D  SRF+ +GKPIY+ +GTSTF+EYTV     VAKI+P APL+  C++ CG +TG
Sbjct: 122 GLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATG 179
Query: 133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           +GA VN AK   G + A+F             + +GASRIIGV  +  +F +A + G TE
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239
Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
            +NPKDYDKP+ +VI + TNGGVD +VEC G ++ M++A +  + G GV V++G+ + ++
Sbjct: 240 CLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNE 299
Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                P+ LL  R+LKG+ FG +K   ++  +V+ YM K++ V   ++  +   +INKAF
Sbjct: 300 RLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAF 358
Query: 313 DLMLAGESIRCII 325
           +L+ +G+ +R I+
Sbjct: 359 ELLSSGQGVRSIM 371

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score =  125 bits (313), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 150/321 (46%), Gaps = 15/321 (4%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
            P + GHE  GI+E++G  VT+LQ GDHV+  + G C +C  C++     C         
Sbjct: 59  LPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFS 117
Query: 73  GVMINDGQSRFSI----KGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCG 128
           G    D +   ++    +G    HF   S+F+ Y ++      K+    P++ +  L CG
Sbjct: 118 GA---DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCG 174
Query: 129 ISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKF 188
           I TG GA +N  K     S   +             +V GAS II VD+  SR   AK+ 
Sbjct: 175 IQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234
Query: 189 GVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248
           G T  +N K  D PV   I ++T+GGV+ ++E TGS + +    + +     +AV VG P
Sbjct: 235 GATHVINSKTQD-PV-AAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAV-VGAP 291
Query: 249 N--KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFS 306
                  F  + + LL  +T+ G   G+  P+  +P +V  Y   +   ++ +     F 
Sbjct: 292 QLGTTAQFDVNDL-LLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKFYA-FD 349
Query: 307 EINKAFDLMLAGESIRCIIRM 327
           EIN+A      G +++ II++
Sbjct: 350 EINQAAIDSRKGITLKPIIKI 370

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 87.8 bits (216), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 134/317 (42%), Gaps = 42/317 (13%)
Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           W   P  P I GHE  GIVE VG GVT L+ GD V +P     C  C +C S +  +C+ 
Sbjct: 49  WPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCE- 107
Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
                      +   + +S+ G           ++EY       V KI      ++   +
Sbjct: 108 -----------HQKNAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPI 146
Query: 126 SC-GISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNE 184
            C G++T     V  AKP  G+ VAI+             +  G + ++ VD+   +   
Sbjct: 147 FCAGVTTYKALKVTGAKP--GEWVAIYGIGGLGHVAVQYAKAMGLN-VVAVDIGDEKLEL 203
Query: 185 AKKFGVTEFVNP--KDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
           AK+ G    VNP  +D  K +++ +     GGV  +V    S  A  SA+  +  G G  
Sbjct: 204 AKELGADLVVNPLKEDAAKFMKEKV-----GGVHAAVVTAVSKPAFQSAYNSIRRG-GAC 257
Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVG+P ++         +LN   + G+  G    R DL   ++     ++   K I   
Sbjct: 258 VLVGLPPEEMPIPIFD-TVLNGIKIIGSIVGT---RKDLQEALQFAAEGKV---KTIIEV 310
Query: 303 VPFSEINKAFDLMLAGE 319
            P  +IN+ FD ML G+
Sbjct: 311 QPLEKINEVFDRMLKGQ 327

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 134/317 (42%), Gaps = 42/317 (13%)
Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           W   P  P I GHE  GIVE VG GVT L+ GD V +P     C  C +C S +  +C+ 
Sbjct: 49  WPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCE- 107
Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
                      +   + +S+ G           ++EY       V KI      ++   +
Sbjct: 108 -----------HQKNAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPI 146
Query: 126 SC-GISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNE 184
            C G++T     V  AKP  G+ VAI+             +  G + ++ VD+   +   
Sbjct: 147 FCAGVTTYKALKVTGAKP--GEWVAIYGIGGFGHVAVQYAKAMGLN-VVAVDIGDEKLEL 203
Query: 185 AKKFGVTEFVNP--KDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
           AK+ G    VNP  +D  K +++ +     GGV  +V    S  A  SA+  +  G G  
Sbjct: 204 AKELGADLVVNPLKEDAAKFMKEKV-----GGVHAAVVTAVSKPAFQSAYNSIRRG-GAC 257
Query: 243 VLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
           VLVG+P ++         +LN   + G+  G    R DL   ++     ++   K I   
Sbjct: 258 VLVGLPPEEMPIPIFD-TVLNGIKIIGSIVGT---RKDLQEALQFAAEGKV---KTIIEV 310
Query: 303 VPFSEINKAFDLMLAGE 319
            P  +IN+ FD ML G+
Sbjct: 311 QPLEKINEVFDRMLKGQ 327

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 144/327 (44%), Gaps = 27/327 (8%)
Query: 13  FPRIFGHE-AGGIVESVGEGV----TDLQPGDHVLPVFTGECKECPHCH-SEESNMCDLL 66
            P I GHE AG +VE  GE        L+PGD ++      C EC  C  S+E  +C   
Sbjct: 71  LPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLC--- 127
Query: 67  RINTDRGVM-INDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
               +R V  IN G S +        H  G  + S   +     V K++    LD + + 
Sbjct: 128 ---PNRKVYGINRGCSEYP-------HLRGCYS-SHIVLDPETDVLKVSEKDDLDVLAMA 176
Query: 126 SCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEA 185
            C  +T + A     +   G++V I              R  GA  +I +  +P+R   A
Sbjct: 177 MCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA 236
Query: 186 KKFGVTEFVNPKDYD-KPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAV 243
           ++ G    +N ++   +  ++ I D+T+G G D  +E TG  +A++   E +  G   +V
Sbjct: 237 EEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSV 296
Query: 244 L-VGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHT 302
             V VP     FK +   +L   T KG +  +        S+  +  N +L + K ITH 
Sbjct: 297 AGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSR--NYQL-LSKLITHR 353
Query: 303 VPFSEINKAFDLMLAGESIRCIIRMDG 329
           +P  E NKA +LM + E+++ I+  +G
Sbjct: 354 LPLKEANKALELMESREALKVILYPEG 380

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 137/324 (42%), Gaps = 54/324 (16%)
Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
           P + GHE  G+VE+VG GV   Q GDHV       C  CP C +   ++C    +NT   
Sbjct: 58  PLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVC----LNTQIL 113
Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPA-APLDKVCVLSCGISTG 132
            +  DG                   F+EY V      A +NP   P +   +L       
Sbjct: 114 GVDRDG------------------GFAEYVVVPAEN-AWVNPKDLPFEVAAILEP----- 149
Query: 133 FG---ATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           FG    TV       G+SV I              R SGA  I+  D NP R   A+ + 
Sbjct: 150 FGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA 209
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
               VNP + D  + +V+  +T  GV+  +E +G+  A+      +  G G A ++G+P+
Sbjct: 210 -DRLVNPLEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPS 265
Query: 250 KDDAFKTHPMNLLNERTLKG-TFFGNYKPRSDLPSVVEKYM-------NKELEVEKFITH 301
               F     +L  E  ++G T FG    R     + + +M       +  +++   +TH
Sbjct: 266 DPIRF-----DLAGELVMRGITAFGIAGRR-----LWQTWMQGTALVYSGRVDLSPLLTH 315
Query: 302 TVPFSEINKAFDLMLAGESIRCII 325
            +P S   +AF L+ +G++++ I+
Sbjct: 316 RLPLSRYREAFGLLASGQAVKVIL 339

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 128/309 (41%), Gaps = 36/309 (11%)
Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVL-PVFTGECKECPHCHSEESNMCDLLRINTDRGV 74
           I GHEA G V  VG  V D +PGD V+ P  T      P   + E            RG 
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAIT------PDWRTSE----------VQRGY 99
Query: 75  MINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVG----CVAKINPAAPLDKVCVLSCGIS 130
             + G      K    +  V    F E+   HV      +A +    PL+   ++   ++
Sbjct: 100 HQHSGGMLAGWK----FSNVKDGVFGEFF--HVNDADMNLAHLPKEIPLEAAVMIPDMMT 153
Query: 131 TGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGV 190
           TGF     +A  + G +VA+              ++ GA RII V   P   + AK +G 
Sbjct: 154 TGFHGA-ELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGA 212
Query: 191 TEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVL--VGV 247
           T+ VN K  D P++  I ++T G GVD ++   G+   M +A + V  G  +A +   G 
Sbjct: 213 TDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGE 270
Query: 248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVP-FS 306
               D  +      +  +T+KG      + R  +  +++    K ++  K +TH    F 
Sbjct: 271 GEVLDVPRLEWGCGMAHKTIKGGLCPGGRLR--MERLIDLVFYKRVDPSKLVTHVFRGFD 328
Query: 307 EINKAFDLM 315
            I KAF LM
Sbjct: 329 NIEKAFMLM 337

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 128/324 (39%), Gaps = 37/324 (11%)
Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           W   P  P I GHE  G V +VG GV  ++ GD V +P     C  C HC      +C+ 
Sbjct: 74  WPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCE- 132
Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVC-V 124
            ++NT  G  +N G                   F+EY V     V  +      +++  V
Sbjct: 133 EQLNT--GYSVNGG-------------------FAEYVVADPNFVGHLPKNIDFNEIAPV 171
Query: 125 LSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNE 184
           L  G++   G  V   KP  G  V I              R  G + +  VD++  + + 
Sbjct: 172 LCAGVTVYKGLKVTDTKP--GDWVVISGIGGLGHMAVQYARAMGLN-VAAVDIDDRKLDL 228
Query: 185 AKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL 244
           A++ G T  VN K    P   +  + T+GG    +    S +A   A   V  G G   L
Sbjct: 229 ARRLGATVTVNAKTVADPAAYIRKE-TDGGAQGVLVTAVSPKAFEQALGMVARG-GTVSL 286
Query: 245 VGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVP 304
            G+P  D       M +LN  T++G+  G    R DL   ++   + ++   K    T  
Sbjct: 287 NGLPPGDFPLSIFNM-VLNGVTVRGSIVGT---RLDLQESLDFAADGKV---KATIQTGK 339
Query: 305 FSEINKAFDLMLAGESIRCIIRMD 328
             +IN  FD M  G +I   I MD
Sbjct: 340 LEDINAIFDDMRQG-NIEGRIVMD 362

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 129/313 (41%), Gaps = 44/313 (14%)
Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVL-PVFTGECKECPHCHSEESNMCDLLRINTDRGV 74
           I GHEA G V  VG  V D +PGD V+ P  T      P   + E            RG 
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAIT------PDWRTSE----------VQRGY 99
Query: 75  MINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVG----CVAKINPAAPLDKVCVLSCGIS 130
             + G      K    +  V    F E+   HV      +A +    PL+   ++   ++
Sbjct: 100 HQHSGGMLAGWK----FSNVKDGVFGEFF--HVNDADMNLAHLPKEIPLEAAVMIPDMMT 153
Query: 131 TGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGV 190
           TGF     +A  + G +VA+              ++ GA RII V   P   + AK +G 
Sbjct: 154 TGFHGA-ELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGA 212
Query: 191 TEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
           T+ VN K  D P++  I ++T G GVD ++   G+   M +A + V  G  +A +    N
Sbjct: 213 TDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANV----N 266
Query: 250 KDDAFKTHPMNLLN------ERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTV 303
                +  P+  L        +T+KG      + R  +  +++    K ++  K +TH  
Sbjct: 267 YFGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRLR--MERLIDLVFYKRVDPSKLVTHVF 324
Query: 304 P-FSEINKAFDLM 315
             F  I KAF LM
Sbjct: 325 RGFDNIEKAFMLM 337

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 125/318 (39%), Gaps = 38/318 (11%)
Query: 4   DKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNM 62
           D  W   P  P I GHE  G V +VG GV+ ++ GD V +P     C  C HC      +
Sbjct: 48  DGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETL 107
Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           C+                + +S+ G    + V    +       VG V +I P       
Sbjct: 108 CE------------KQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFV-EIAP------- 147
Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRF 182
            +L  G++   G  V   +P  GQ V I              R  G  R+  VD++ ++ 
Sbjct: 148 -ILCAGVTVYKGLKVTDTRP--GQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKL 203
Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA 242
           N A++ G    VN +D D P   +  ++  GG    +    S +A   A   V  G G  
Sbjct: 204 NLARRLGAEVAVNARDTD-PAAWLQKEI--GGAHGVLVTAVSPKAFSQAIGMVRRG-GTI 259
Query: 243 VLVGVPNKDDAFKTHPMN-LLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITH 301
            L G+P  D  F T   + +L   T++G+  G    RSDL   ++   + ++   K    
Sbjct: 260 ALNGLPPGD--FGTPIFDVVLKGITIRGSIVGT---RSDLQESLDFAAHGDV---KATVS 311
Query: 302 TVPFSEINKAFDLMLAGE 319
           T    ++N  F  +  G+
Sbjct: 312 TAKLDDVNDVFGRLREGK 329

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 126/315 (40%), Gaps = 38/315 (12%)
Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           W   P  P I GHE  G V +VG GVT ++ GD V +P     C  C HC +    +C+ 
Sbjct: 55  WPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCE- 113
Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
                + G  +N G + + +   P Y  +                A+I P        +L
Sbjct: 114 --SQQNTGYSVNGGYAEY-VLADPNYVGILPKNVE---------FAEIAP--------IL 153
Query: 126 SCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEA 185
             G++   G     A+P  GQ VAI              R  G   +  +D++ ++   A
Sbjct: 154 CAGVTVYKGLKQTNARP--GQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELA 210
Query: 186 KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245
           +K G +  VN +  D PV+ +  D+  GG    +    S  A   A      G G   LV
Sbjct: 211 RKLGASLTVNARQED-PVEAIQRDI--GGAHGVLVTAVSNSAFGQAIGMARRG-GTIALV 266
Query: 246 GVPNKDDAFKTHPMN-LLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVP 304
           G+P  D  F T   + +L    + G+  G    R+DL   ++ +  + L   K   H   
Sbjct: 267 GLPPGD--FPTPIFDVVLKGLHIAGSIVGT---RADLQEALD-FAGEGL--VKATIHPGK 318
Query: 305 FSEINKAFDLMLAGE 319
             +IN+  D M AG+
Sbjct: 319 LDDINQILDQMRAGQ 333

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 126/310 (40%), Gaps = 38/310 (12%)
Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVL-PVFTGECKECPHCHSEESNMCDLLRINTDRGV 74
           I GHEA G V  VG  V D +PGD V+ P  T      P   + E            RG 
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAIT------PDWRTSE----------VQRGY 99
Query: 75  MINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVG----CVAKINPAAPLDKVCVLSCGIS 130
             + G      K    +  V    F E+   HV      +A +    PL+   ++   ++
Sbjct: 100 HQHSGGMLAGWK----FSNVKDGVFGEFF--HVNDADMNLAHLPKEIPLEAAVMIPDMMT 153
Query: 131 TGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGV 190
           TGF     +A  + G SV +              ++ GA RIIGV   P     AK +G 
Sbjct: 154 TGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGA 212
Query: 191 TEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
           T+ +N K+    V QV+  +TNG GVDR +   G  + +  A + V  G G+   +    
Sbjct: 213 TDILNYKN-GHIVDQVM-KLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHG 269
Query: 250 KDDAFKTHPMNL---LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVP-F 305
             DA     +     +  +T+KG      + R  +  +++    K ++  K +TH    F
Sbjct: 270 SGDALLIPRVEWGCGMAHKTIKGGLCPGGRLR--MERLIDLVFYKRVDPSKLVTHVFRGF 327
Query: 306 SEINKAFDLM 315
             I KAF LM
Sbjct: 328 DNIEKAFMLM 337

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 125/310 (40%), Gaps = 38/310 (12%)
Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVL-PVFTGECKECPHCHSEESNMCDLLRINTDRGV 74
           I GHEA G V  VG  V D +PGD V+ P  T      P   + E            RG 
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAIT------PDWRTSE----------VQRGY 99
Query: 75  MINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVG----CVAKINPAAPLDKVCVLSCGIS 130
             + G      K    +  V    F E+   HV      +A +    PL+   ++   ++
Sbjct: 100 HQHSGGMLAGWK----FSNVKDGVFGEFF--HVNDADMNLAHLPKEIPLEAAVMIPDMMT 153
Query: 131 TGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGV 190
           TGF     +A  + G SV +              ++ GA RIIGV   P     AK +G 
Sbjct: 154 TGFHGA-ELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGA 212
Query: 191 TEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
           T+ +N K+    V QV+  +TNG GVDR +   G  + +  A   V  G G+   +    
Sbjct: 213 TDILNYKN-GHIVDQVM-KLTNGKGVDRVIMAGGGSETLSQAVSMVKPG-GIISNINYHG 269
Query: 250 KDDAFKTHPMNL---LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVP-F 305
             DA     +     +  +T+KG      + R  +  +++    K ++  K +TH    F
Sbjct: 270 SGDALLIPRVEWGCGMAHKTIKGGLCPGGRLR--MERLIDLVFYKRVDPSKLVTHVFRGF 327
Query: 306 SEINKAFDLM 315
             I KAF LM
Sbjct: 328 DNIEKAFMLM 337

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 135/329 (41%), Gaps = 47/329 (14%)
Query: 6   RWGQTPLFP-RIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCD 64
            W Q+ + P +I GHE  G V  VG GV DLQ GD++       C +C  C     ++C 
Sbjct: 53  EWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGDYISVETHIVCGKCYACKHNRYHVCQ 112
Query: 65  LLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCV 124
               NT    +  DG                   F+ Y +       K NP     +   
Sbjct: 113 ----NTKIFGVDMDG------------------VFAHYAIVPAKNAWK-NPKDMPPEYAA 149
Query: 125 LSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNE 184
           L   +  G      +A P  G+S  I              + SGA  +I  + +  R   
Sbjct: 150 LQEPL--GNAVDTVLAGPIAGRSTLITGAGPLGLLGIAVAKASGAYPVIVSEPSEFRRKL 207
Query: 185 AKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAV 243
           AKK G    VNP + D PV+ V+ D+T+G GV+  +E +G+ +A+    + V  G  V++
Sbjct: 208 AKKVGADYVVNPFEED-PVKFVM-DITDGAGVEVFLEFSGAPKALEQGLKAVTPGGRVSL 265
Query: 244 LVGVP-------NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVE 296
           L   P       N    FK   ++ +  R L  T++          +V     + +L ++
Sbjct: 266 LGLFPREVTIDFNNLIIFKALEVHGITGRHLWETWY----------TVSSLIQSGKLNLD 315
Query: 297 KFITHTVP-FSEINKAFDLMLAGESIRCI 324
             ITH    F +  +AF+LM AG++ + +
Sbjct: 316 PIITHKYKGFDKFEEAFELMRAGKTGKVV 344

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 129/312 (41%), Gaps = 42/312 (13%)
Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVL-PVFTGECK--ECPHCHSEESNMCDLLRINTDR 72
           I GHEA G V  VG  V D +PGD V+ P  T + +  E      + SN           
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSN----------- 104
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVG----CVAKINPAAPLDKVCVLSCG 128
           G++     S F               F EY   HV      +A +    PL+   +++  
Sbjct: 105 GMLAGWKFSNFK-----------DGVFGEYF--HVNDADMNLAILPKDMPLENAVMITDM 151
Query: 129 ISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKF 188
           ++TGF     +A  + G +VA+              ++ GA RII V   P   + AK +
Sbjct: 152 MTTGFHGA-ELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYY 210
Query: 189 GVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
           G T+ VN K  D P++  I ++T G GVD ++   G+   M +A + V  G G    V  
Sbjct: 211 GATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GTIANVNY 267
Query: 248 PNKDDAFKTHPMNL---LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTV- 303
             + +      +     +  +T+KG      + R+++   +  Y    +++ K +TH   
Sbjct: 268 FGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRLRAEMLRDMVVY--NRVDLSKLVTHVYH 325
Query: 304 PFSEINKAFDLM 315
            F  I +A  LM
Sbjct: 326 GFDHIEEALLLM 337

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 122/305 (40%), Gaps = 38/305 (12%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTD 71
            P   GHE  G +E VG+ V     GD V +  + GE   C +C   E ++CD     + 
Sbjct: 62  LPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGN-CYYCRIGEEHLCD-----SP 115
Query: 72  RGVMIN-DGQSRFSIKGKPIYHFVGTSTFSEYT-VTHVGCVAKINPAAPLDKVCVLSCGI 129
           R + IN DG                   ++EY  V H   + K+   + ++   +   G+
Sbjct: 116 RWLGINYDG------------------AYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGV 157
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           +T          P K   V                 VSGA+ IIGVD+       AK+ G
Sbjct: 158 TTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSGAT-IIGVDVREEALEAAKRAG 216
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
               +N    D PV ++       G D  ++   S +  +S +  V    G  V+VG+  
Sbjct: 217 ADYVINASSQD-PVSEIRRITQGKGADAVIDLNNS-EKTLSIYPYVLAKQGKYVMVGLFG 274
Query: 250 KDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEI 308
            D   K H P+  LNE    G+  GN   +SD   ++   + +  +V+  +T T+   E 
Sbjct: 275 AD--LKYHAPLITLNEVQFIGSLVGN---QSDFLGIMS--LAEAGKVKPMVTKTMKLEEA 327
Query: 309 NKAFD 313
           N+A D
Sbjct: 328 NEAID 332

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 115/301 (38%), Gaps = 41/301 (13%)
Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR---INT 70
           P   GHE  GIV   G  V D+ PG  +       C  CP C +   N+C  LR   I+ 
Sbjct: 76  PVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHR 135
Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
           D G                         F+EY +       +I     LD V    C   
Sbjct: 136 DGG-------------------------FAEYVLVPRKQAFEI--PLTLDPVHGAFCEPL 168
Query: 131 TGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGV 190
                 V+++  K G +VAI              R++GA+ +I      ++   A++ G 
Sbjct: 169 ACCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA 228
Query: 191 TEFVNPKDYDKPVQQVIA---DMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
           T  V+P   D  V + IA    +  GGVD  +EC G  + +  +      G G  V++GV
Sbjct: 229 TATVDPSAGD--VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGV 285
Query: 248 PNKDDAFKTHPMNLL-NERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFS 306
             + +  +  P ++L  E  + G+F   +  R       +      +E+++ I+  +   
Sbjct: 286 LPQGEKVEIEPFDILFRELRVLGSFINPFVHR----RAADLVATGAIEIDRXISRRISLD 341
Query: 307 E 307
           E
Sbjct: 342 E 342

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 136/332 (40%), Gaps = 47/332 (14%)
Query: 6   RWGQTPLFP-RIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCD 64
            W Q+ + P +I GHE  G V  +G GV  ++ GD+V       C +C  C   + ++C 
Sbjct: 52  EWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQ 111
Query: 65  LLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCV 124
               NT    +  DG                   F+EY V     + K NP +   +   
Sbjct: 112 ----NTKIFGVDTDG------------------VFAEYAVVPAQNIWK-NPKSIPPEYAT 148
Query: 125 LSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNE 184
           L   +  G      +A P  G+SV I              + SGA  +I  + +  R   
Sbjct: 149 LQEPL--GNAVDTVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRREL 206
Query: 185 AKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAV 243
           AKK G    +NP  +++ V + + D+T+G GVD  +E +G+ +A+    + V     V++
Sbjct: 207 AKKVGADYVINP--FEEDVVKEVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSL 264
Query: 244 LVGVPNKDD-------AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVE 296
           L   P K          FK   +  +  R L  T++          +V     + +L ++
Sbjct: 265 LGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWY----------TVSRLLQSGKLNLD 314
Query: 297 KFITHTVP-FSEINKAFDLMLAGESIRCIIRM 327
             ITH    F +  +AF+L  AG++ + +  +
Sbjct: 315 PIITHKYKGFDKYEEAFELXRAGKTGKVVFXL 346

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 136/332 (40%), Gaps = 47/332 (14%)
Query: 6   RWGQTPLFP-RIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCD 64
            W Q+ + P +I GHE  G V  +G GV  ++ GD+V       C +C  C   + ++C 
Sbjct: 53  EWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQ 112
Query: 65  LLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCV 124
               NT    +  DG                   F+EY V     + K NP +   +   
Sbjct: 113 ----NTKIFGVDTDG------------------VFAEYAVVPAQNIWK-NPKSIPPEYAT 149
Query: 125 LSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNE 184
           L   +  G      +A P  G+SV I              + SGA  +I  + +  R   
Sbjct: 150 LQEPL--GNAVDTVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRREL 207
Query: 185 AKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAV 243
           AKK G    +NP  +++ V + + D+T+G GVD  +E +G+ +A+    + V     V++
Sbjct: 208 AKKVGADYVINP--FEEDVVKEVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSL 265
Query: 244 LVGVPNKDD-------AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVE 296
           L   P K          FK   +  +  R L  T++          +V     + +L ++
Sbjct: 266 LGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWY----------TVSRLLQSGKLNLD 315
Query: 297 KFITHTVP-FSEINKAFDLMLAGESIRCIIRM 327
             ITH    F +  +AF+L  AG++ + +  +
Sbjct: 316 PIITHKYKGFDKYEEAFELXRAGKTGKVVFXL 347

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 129/327 (39%), Gaps = 52/327 (15%)
Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
           P + GHEA G V  VG  V  LQPGD V           P    +    C + R N    
Sbjct: 63  PMVLGHEASGTVVKVGSLVRHLQPGDRV--------AIQPGAPRQTDEFCKIGRYNLSPT 114
Query: 74  VMI-----NDGQ-SRFSIKGKPI-YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLS 126
           +       +DG   RF        Y      TF E         A I P         LS
Sbjct: 115 IFFCATPPDDGNLCRFYKHNANFCYKLPDNVTFEEG--------ALIEP---------LS 157
Query: 127 CGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAK 186
            GI     A V +     G  V +              +  GA++++  DL+ SR ++AK
Sbjct: 158 VGIHACRRAGVTL-----GNKVLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAK 212
Query: 187 KFG---VTEFVN--PKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGV 241
           + G   + E  N  P++  K V+ ++        + ++ECTG   ++ +     H G G 
Sbjct: 213 EVGADFILEISNESPEEIAKKVEGLLGSKP----EVTIECTGVETSIQAGIYATHSG-GT 267
Query: 242 AVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITH 301
            VLVG+ ++  +     + L++  T +    G ++  +  P  +    +K + V+  +TH
Sbjct: 268 LVLVGLGSEMTS-----VPLVHAATREVDIKGVFRYCNTWPMAISMLASKSVNVKPLVTH 322
Query: 302 TVPFSEINKAFDLMLAGESIRCIIRMD 328
             P  +  +AF+    G  ++ +I+ D
Sbjct: 323 RFPLEKALEAFETSKKGLGLKVMIKCD 349

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 125/328 (38%), Gaps = 54/328 (16%)
Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
           P + GHEA G VE VG  V  L+PGD V           P    E    C + R N    
Sbjct: 64  PMVLGHEASGTVEKVGSSVKHLKPGDRVAIE--------PGAPRENDEFCKMGRYNLSPS 115
Query: 74  VMI-----NDGQ-SRFSIKGKPI-YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLS 126
           +       +DG   RF        Y      TF E         A I P         LS
Sbjct: 116 IFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEG--------ALIEP---------LS 158
Query: 127 CGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAK 186
            GI       V +     G  V +              +  GA++++  DL+ +R ++AK
Sbjct: 159 VGIHACRRGGVTL-----GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK 213
Query: 187 KFGVTEFVNPKDYDKPVQQVIADMTNGGV----DRSVECTGSVQAMISAFECVHDGWGVA 242
           + G    +      K   Q IA    G +    + ++ECTG+  ++ +       G G  
Sbjct: 214 EIGADLVLQ---ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTL 269
Query: 243 VLVGVPNKDDAFKTHPM--NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFIT 300
           VLVG+ ++     T P+    + E  +KG F    +  +  P  +    +K + V+  +T
Sbjct: 270 VLVGLGSE---MTTVPLLHAAIREVDIKGVF----RYCNTWPVAISMLASKSVNVKPLVT 322
Query: 301 HTVPFSEINKAFDLMLAGESIRCIIRMD 328
           H  P  +  +AF+    G  ++ +++ D
Sbjct: 323 HRFPLEKALEAFETFKKGLGLKIMLKCD 350

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 123/307 (40%), Gaps = 37/307 (12%)
Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTDRGV 74
           + GHE  GIV+ +G  V+ LQ GD V +  F   C  C +C S     C   R   + G 
Sbjct: 57  VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFC---REVKNAGY 113
Query: 75  MINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKI-NPAAPLDKVCVLSCGISTGF 133
            ++ G +  +I              ++Y V       K+ +   P++   +   G++T  
Sbjct: 114 SVDGGMAEEAI------------VVADYAV-------KVPDGLDPIEASSITCAGVTTYK 154
Query: 134 GATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEF 193
              V+  KP   Q   IF             +    +++I VD+N  + N AKK G    
Sbjct: 155 AIKVSGVKPGDWQ--VIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVT 212
Query: 194 VNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
           +N  D + PV + I  +T G GV  ++ C  +  A   A   +    G  V V VPN + 
Sbjct: 213 INSGDVN-PVDE-IKKITGGLGVQSAIVCAVARIAFEQAVASLKP-MGKMVAVAVPNTEM 269
Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                P  + +   + G+  G    R DL    +     E +V K I  T    EIN   
Sbjct: 270 TLSV-PTVVFDGVEVAGSLVGT---RLDLAEAFQ--FGAEGKV-KPIVATRKLEEINDII 322
Query: 313 DLMLAGE 319
           D M AG+
Sbjct: 323 DEMKAGK 329

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 127/312 (40%), Gaps = 42/312 (13%)
Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVL-PVFTGECK--ECPHCHSEESNMCDLLRINTDR 72
           I GHEA G V  VG  V D +PGD V+ P  T + +  E      + SN           
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSN----------- 104
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVG----CVAKINPAAPLDKVCVLSCG 128
           G++     S F               F EY   HV      +A +    PL+   +++  
Sbjct: 105 GMLAGWKFSNFK-----------DGVFGEYF--HVNDADMNLAILPKDMPLENAVMITDM 151
Query: 129 ISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKF 188
           ++TGF     +A  + G SV +              ++ GA RIIGV   P     AK +
Sbjct: 152 MTTGFHGA-ELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFY 210
Query: 189 GVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
           G T+ +N K+    V QV+  +TNG GVDR +   G  + +  A   V  G G+   +  
Sbjct: 211 GATDILNYKN-GHIVDQVM-KLTNGKGVDRVIMAGGGSETLSQAVSMVKPG-GIISNINY 267
Query: 248 PNKDDAFKTHPMNL---LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTV- 303
               DA     +     +  +T+KG      + R+++   +  Y    +++ K +TH   
Sbjct: 268 HGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAEMLRDMVVY--NRVDLSKLVTHVYH 325
Query: 304 PFSEINKAFDLM 315
            F  I +A  LM
Sbjct: 326 GFDHIEEALLLM 337

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 123/307 (40%), Gaps = 37/307 (12%)
Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTDRGV 74
           + GHE  GIV+ +G  V+ LQ GD V +  F   C  C +C S     C   R   + G 
Sbjct: 57  VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFC---REVKNAGY 113
Query: 75  MINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKI-NPAAPLDKVCVLSCGISTGF 133
            ++ G +  +I              ++Y V       K+ +   P++   +   G++T  
Sbjct: 114 SVDGGMAEEAI------------VVADYAV-------KVPDGLDPIEASSITCAGVTTYK 154
Query: 134 GATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEF 193
              V+  KP   Q   IF             +    +++I VD+N  + N AKK G    
Sbjct: 155 AIKVSGVKPGDWQ--VIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVI 212
Query: 194 VNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
           +N  D + PV + I  +T G GV  ++ C  +  A   A   +    G  V V +PN + 
Sbjct: 213 INSGDVN-PVDE-IKKITGGLGVQSAIVCAVARIAFEQAVASLKP-MGKMVAVALPNTEM 269
Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                P  + +   + G+  G    R DL    +     E +V K I  T    EIN   
Sbjct: 270 TLSV-PTVVFDGVEVAGSLVGT---RLDLAEAFQ--FGAEGKV-KPIVATRKLEEINDII 322
Query: 313 DLMLAGE 319
           D M AG+
Sbjct: 323 DEMKAGK 329

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 127/312 (40%), Gaps = 42/312 (13%)
Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVL-PVFTGECK--ECPHCHSEESNMCDLLRINTDR 72
           I GHEA G V  VG  V D +PGD V+ P  T + +  E      + SN           
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSN----------- 104
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVG----CVAKINPAAPLDKVCVLSCG 128
           G++     S F               F EY   HV      +A +    PL+   +++  
Sbjct: 105 GMLAGWKFSNFK-----------DGVFGEYF--HVNDADMNLAILPKDMPLENAVMITDM 151
Query: 129 ISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKF 188
           ++TGF     +A  + G SV +              ++ GA RIIGV   P     AK +
Sbjct: 152 MTTGFHGA-ELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFY 210
Query: 189 GVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
           G T+ +N K+    V QV+  +TNG GVDR +   G  + +  A   V  G G+   +  
Sbjct: 211 GATDILNYKN-GHIVDQVM-KLTNGKGVDRVIMAGGGSETLSQAVSMVKPG-GIISNINY 267
Query: 248 PNKDDAFKTHPMNL---LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTV- 303
               DA     +     +  +T+KG      + R+++   +  Y    +++ K +TH   
Sbjct: 268 HGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAEMLRDMVVY--NRVDLSKLVTHVYH 325
Query: 304 PFSEINKAFDLM 315
            F  I +A  LM
Sbjct: 326 GFDHIEEALLLM 337

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 121/304 (39%), Gaps = 36/304 (11%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTD 71
            P   GHE  G +E VG+ V     GD V +  + GE   C +C   E ++CD     + 
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGN-CYYCRIGEEHLCD-----SP 115
Query: 72  RGVMIN-DGQSRFSIKGKPIYHFVGTSTFSEYTVT-HVGCVAKINPAAPLDKVCVLSCGI 129
           R + IN DG                   ++EY +  H   + K+     ++   +   GI
Sbjct: 116 RWLGINFDG------------------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGI 157
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           +T          P K   V                 VSGA+ IIGVD+       AK+ G
Sbjct: 158 TTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGAT-IIGVDVREEAVEAAKRAG 216
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
               +N    D P+ ++     + GVD  ++   S +  +S +       G  V+VG+  
Sbjct: 217 ADYVINASMQD-PLAEIRRITESKGVDAVIDLNNS-EKTLSVYPKALAKQGKYVMVGLFG 274
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
            D  +   P+  L+E    G+  GN   +SD   ++   + +  +V+  IT T+   E N
Sbjct: 275 ADLHYHA-PLITLSEIQFVGSLVGN---QSDFLGIMR--LAEAGKVKPMITKTMKLEEAN 328
Query: 310 KAFD 313
           +A D
Sbjct: 329 EAID 332

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 127/312 (40%), Gaps = 42/312 (13%)
Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVL-PVFTGECK--ECPHCHSEESNMCDLLRINTDR 72
           I GHEA G V  VG  V D +PGD V+ P  T + +  E      + SN           
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSN----------- 104
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVG----CVAKINPAAPLDKVCVLSCG 128
           G++     S F               F EY   HV      +A +    PL+   +++  
Sbjct: 105 GMLAGWKFSNFK-----------DGVFGEYF--HVNDADMNLAILPKDMPLENAVMITDM 151
Query: 129 ISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKF 188
           ++TGF     +A  + G SV +              ++ GA RIIGV   P     AK +
Sbjct: 152 MTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFY 210
Query: 189 GVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
           G T+ +N K  +  ++  +  +TNG GVDR +   G  + +  A + V  G G+   +  
Sbjct: 211 GATDILNYK--NGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINY 267
Query: 248 PNKDDAFKTHPMNL---LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTV- 303
               DA     +     +  +T+KG      + R++   + +  +   +++ K +TH   
Sbjct: 268 HGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAE--RLRDMVVYNRVDLSKLVTHVYH 325
Query: 304 PFSEINKAFDLM 315
            F  I +A  LM
Sbjct: 326 GFDHIEEALLLM 337

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 124/328 (37%), Gaps = 54/328 (16%)
Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
           P + GHEA G VE VG  V  L+PGD V           P    E    C   R N    
Sbjct: 64  PXVLGHEASGTVEKVGSSVKHLKPGDRVAIE--------PGAPRENDEFCKXGRYNLSPS 115
Query: 74  VMI-----NDGQ-SRFSIKGKPI-YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLS 126
           +       +DG   RF        Y      TF E         A I P         LS
Sbjct: 116 IFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEG--------ALIEP---------LS 158
Query: 127 CGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAK 186
            GI       V +     G  V +              +  GA++++  DL+ +R ++AK
Sbjct: 159 VGIHACRRGGVTL-----GHKVLVCGAGPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAK 213
Query: 187 KFGVTEFVNPKDYDKPVQQVIADMTNGGV----DRSVECTGSVQAMISAFECVHDGWGVA 242
           + G    +      K   Q IA    G +    + ++ECTG+  ++ +       G G  
Sbjct: 214 EIGADLVLQ---ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTL 269
Query: 243 VLVGVPNKDDAFKTHPM--NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFIT 300
           VLVG+ ++     T P+    + E  +KG F    +  +  P  +    +K + V+  +T
Sbjct: 270 VLVGLGSEXT---TVPLLHAAIREVDIKGVF----RYCNTWPVAISXLASKSVNVKPLVT 322
Query: 301 HTVPFSEINKAFDLMLAGESIRCIIRMD 328
           H  P  +  +AF+    G  ++  ++ D
Sbjct: 323 HRFPLEKALEAFETFKKGLGLKIXLKCD 350

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 121/304 (39%), Gaps = 36/304 (11%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTD 71
            P   GHE  G +E VG+ V     GD V +  + GE   C +C   E ++CD     + 
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGN-CYYCRIGEEHLCD-----SP 115
Query: 72  RGVMIN-DGQSRFSIKGKPIYHFVGTSTFSEYTVT-HVGCVAKINPAAPLDKVCVLSCGI 129
           R + IN DG                   ++EY +  H   + K+     ++   +   GI
Sbjct: 116 RWLGINFDG------------------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGI 157
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           +T          P K   V                 VSGA+ IIGVD+       AK+ G
Sbjct: 158 TTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGAT-IIGVDVREEAVEAAKRAG 216
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
               +N    D P+ ++     + GVD  ++   S +  +S +       G  V+VG+  
Sbjct: 217 ADYVINASMQD-PLAEIRRITESKGVDAVIDLNYS-EKTLSVYPKALAKQGKYVMVGLFG 274
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
            D  +   P+  L+E    G+  GN   +SD   ++   + +  +V+  IT T+   E N
Sbjct: 275 ADLHYHA-PLITLSEIQFVGSLVGN---QSDFLGIMR--LAEAGKVKPMITKTMKLEEAN 328
Query: 310 KAFD 313
           +A D
Sbjct: 329 EAID 332

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 120/304 (39%), Gaps = 36/304 (11%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTD 71
            P   GHE  G +E VG+ V     GD V +    GE   C +C   E ++CD     + 
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGN-CYYCRIGEEHLCD-----SP 115
Query: 72  RGVMIN-DGQSRFSIKGKPIYHFVGTSTFSEYTVT-HVGCVAKINPAAPLDKVCVLSCGI 129
           R + IN DG                   ++EY +  H   + K+     ++   +   GI
Sbjct: 116 RWLGINFDG------------------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGI 157
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           +T          P K   V                 VSGA+ IIGVD+       AK+ G
Sbjct: 158 TTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGAT-IIGVDVREEAVEAAKRAG 216
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
               +N    D P+ ++     + GVD  ++   S +  +S +       G  V+VG+  
Sbjct: 217 ADYVINASMQD-PLAEIRRITESKGVDAVIDLNYS-EKTLSVYPKALAKQGKYVMVGLFG 274
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
            D  +   P+  L+E    G+  GN   +SD   ++   + +  +V+  IT T+   E N
Sbjct: 275 ADLHYHA-PLITLSEIQFVGSLVGN---QSDFLGIMR--LAEAGKVKPMITKTMKLEEAN 328
Query: 310 KAFD 313
           +A D
Sbjct: 329 EAID 332

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 116/308 (37%), Gaps = 40/308 (12%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           +P   GHE  G +++VG GV DL PGD V  V    C  CP C     + C         
Sbjct: 53  YPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQC--------- 103
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTST---FSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
                             Y F+G+     F+EY V     V  +    P++    +   I
Sbjct: 104 ----------------AKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PI 146
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           + G  A  ++A+  + ++V I                 GA  +  +D++  +   AK FG
Sbjct: 147 TVGLHA-FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFG 205
Query: 190 VTEFVNPKDYDKP-VQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248
             +  N  +   P +Q V+ ++    +   +E  G  Q +  A E       +A LVG  
Sbjct: 206 AMQTFNSSEMSAPQMQSVLRELRFNQL--ILETAGVPQTVELAVEIAGPHAQLA-LVGTL 262
Query: 249 NKDDAFKTHPMN--LLNERTLKGTFFGNYK---PRSDLPSVVEKYMNKELEVEKFITHTV 303
           ++D    +      L  E T+ G++  NY    P  +  +       ++L +E  I H  
Sbjct: 263 HQDLHLTSATFGKILRKELTVIGSWM-NYSSPWPGQEWETASRLLTERKLSLEPLIAHRG 321
Query: 304 PFSEINKA 311
            F    +A
Sbjct: 322 SFESFAQA 329

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 118/304 (38%), Gaps = 36/304 (11%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTD 71
            P   GHE  G +E VG+ V     GD V +  + GE   C +C   E ++CD     + 
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGN-CYYCRIGEEHLCD-----SP 115
Query: 72  RGVMIN-DGQSRFSIKGKPIYHFVGTSTFSEYTVT-HVGCVAKINPAAPLDKVCVLSCGI 129
           R + IN DG                   ++EY +  H     K+     ++   +   GI
Sbjct: 116 RWLGINFDG------------------AYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGI 157
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
           +T          P K   V                 VSGA+ IIGVD+       AK+ G
Sbjct: 158 TTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVSGAT-IIGVDVREEAVEAAKRAG 216
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
               +N    D P+ ++     + GVD  ++   S +  +S +       G  V VG+  
Sbjct: 217 ADYVINASMQD-PLAEIRRITESKGVDAVIDLNNS-EKTLSVYPKALAKQGKYVXVGLFG 274
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
            D  +   P+  L+E    G+  GN   +SD   +    + +  +V+  IT T    E N
Sbjct: 275 ADLHYHA-PLITLSEIQFVGSLVGN---QSDFLGIXR--LAEAGKVKPXITKTXKLEEAN 328
Query: 310 KAFD 313
           +A D
Sbjct: 329 EAID 332

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 43/318 (13%)
Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVL--PVFTGECKECPHCHSEESNMCDLLRI 68
           P  P   GHE  G +E V EGV  L+ GD V+  P  T     C  C + E   C+ L  
Sbjct: 71  PKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGT--CLACRAGEDMHCENLEF 128
Query: 69  NTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCG 128
               G+ I+ G                   F+E+  T    V K+      +K+  ++  
Sbjct: 129 P---GLNIDGG-------------------FAEFMRTSHRSVIKLPKDISREKLVEMAPL 166
Query: 129 ISTGFGATVNVAKPKK----GQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNE 184
              G  A   V K  +    G  VAI              +V   + +I +D+   +   
Sbjct: 167 ADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKL 226
Query: 185 AKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL 244
           A++ G    V+ +    PV+QV+      GV+ +++  GS QA +     +    G  ++
Sbjct: 227 AERLGADHVVDAR--RDPVKQVMELTRGRGVNVAMDFVGS-QATVDYTPYLLGRMGRLII 283
Query: 245 VGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSV-VEKYMNKELEVEKFITHTV 303
           VG    +  F T  + + +E + +G+  GNY    +L ++ ++  +  E+++ K      
Sbjct: 284 VGY-GGELRFPTIRV-ISSEVSFEGSLVGNYVELHELVTLALQGKVRVEVDIHK------ 335
Query: 304 PFSEINKAFDLMLAGESI 321
              EIN   + +  GE +
Sbjct: 336 -LDEINDVLERLEKGEVL 352

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 80/214 (37%), Gaps = 25/214 (11%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
            P + G +  G+V++VG GV    PGD V+      C  C  C + E N+C         
Sbjct: 57  LPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLC--------- 107
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
                    R+ I G+   H  G  T++EY V     +A        ++   +     T 
Sbjct: 108 --------PRYQILGE---HRHG--TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTA 154
Query: 133 FGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           +   V+    + G  V +                   +R+I    +  +   AK  G  E
Sbjct: 155 WQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADE 214
Query: 193 FVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSV 225
            VN    D P +  +  +T G G D+ V+ TG++
Sbjct: 215 TVNYTHPDWPKE--VRRLTGGKGADKVVDHTGAL 246

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 119/308 (38%), Gaps = 34/308 (11%)
Query: 16  IFGHEAGGIVESVGEGVTDLQPGDHVL-PVFTGECKECPHCHSEESNMCDLLRINTDRGV 74
           I GHEA G V  VG  V D +PGD V+ P  T      P   + E            RG 
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAIT------PDWRTSE----------VQRGY 99
Query: 75  MINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVG----CVAKINPAAPLDKVCVLSCGIS 130
             + G      K    +  V    F E+   HV      +A +    PL+   ++   ++
Sbjct: 100 HQHSGGMLAGWK----FSNVKDGVFGEFF--HVNDADMNLAHLPKEIPLEAAVMIPDMMT 153
Query: 131 TGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGV 190
           TGF     +A  K G +V +                 GA RI  V       + A ++G 
Sbjct: 154 TGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA 212
Query: 191 TEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL--VGVP 248
           T+ +N K+ D  V+Q++      GVD+ V   G V     A + +  G  +  +  +G  
Sbjct: 213 TDIINYKNGDI-VEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEG 271
Query: 249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVP-FSE 307
           +  D  ++     +  + + G      + R  +  +++    K ++  K +TH    F  
Sbjct: 272 DNIDIPRSEWGVGMGHKHIHGGLCPGGRLR--MERLIDLVFYKRVDPSKLVTHVFRGFDN 329
Query: 308 INKAFDLM 315
           I KAF LM
Sbjct: 330 IEKAFMLM 337

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 12  LFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINT 70
           ++P I GHE  GI++ VG+GV   + GD V +  F   CK C  C   +   C  +    
Sbjct: 57  IYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTY 116
Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSC-GI 129
           D     +D +                  +S   V     V  ++  APL+KV  L C GI
Sbjct: 117 DCLDSFHDNEPHM-------------GGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGI 163
Query: 130 STGFGATVNVAKPKKGQSVAI 150
           +T   + +  +K  KG  V +
Sbjct: 164 TT--YSPLKFSKVTKGTKVGV 182

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 113/295 (38%), Gaps = 34/295 (11%)
Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           WG + ++P + GHE  G V  VG  V  +  GD V +    G C  C  C ++  N C  
Sbjct: 65  WGFS-MYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYC-- 121
Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYT---VTHVGCVAKINPAAPLDKV 122
                           +  +    IYH  GT T+  Y+   V +   + +     PLD  
Sbjct: 122 ---------------PKMILTYASIYH-DGTITYGGYSNHMVANERYIIRFPDNMPLDGG 165
Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRF 182
             L C   T +         + G+ + I              +  G S++  +  +PS+ 
Sbjct: 166 APLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTSPSKK 224
Query: 183 NEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGV 241
            EA K FG   F+  +D ++   Q  A    G +D  ++   +V  ++  F  +    G 
Sbjct: 225 EEALKNFGADSFLVSRDQEQ--MQAAA----GTLDGIIDTVSAVHPLLPLFGLL-KSHGK 277
Query: 242 AVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKY-MNKELEV 295
            +LVG P K        + +   + + G+  G  K   ++     K+ +  ++EV
Sbjct: 278 LILVGAPEKPLELPAFSL-IAGRKIVAGSGIGGMKETQEMIDFAAKHNITADIEV 331

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 68/316 (21%), Positives = 113/316 (35%), Gaps = 46/316 (14%)
Query: 8   GQTPL--FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDL 65
           G  P   +PR+ GHE  G++++VGEGV   + G+ V       C  C  C   + N+C  
Sbjct: 66  GHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTT 125
Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
           L +    GV  + G                   FSEY V       KI P A  D+  V+
Sbjct: 126 LAV---LGVHADGG-------------------FSEYAVVPAKNAWKI-PEAVADQYAVM 162
Query: 126 SCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXR-VSGASRIIGVDLNPSRFNE 184
               +     T +  +P +  +V ++             + V     +I  D    R  +
Sbjct: 163 IEPFTIAANVTGH-GQPTENDTVLVYGAGPIGLTIVQVLKGVYNVKNVIVADRIDERLEK 221
Query: 185 AKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL 244
           AK+ G    +N  +   P+ +  A+             G    +I    C       AV 
Sbjct: 222 AKESGADWAIN--NSQTPLGESFAE------------KGIKPTLIIDAACHPSILKEAVT 267
Query: 245 VGVPNKDDA---FKTHPMNLLNERTL--KGTFFGNYKPRSDLPSVVEKYMNKELEVEKFI 299
           +  P        F + P  ++ +     + + F +    +  P V++      ++ EK I
Sbjct: 268 LASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIKPEKLI 327
Query: 300 THTVPFSEINKAFDLM 315
           THT  F  +  A  L 
Sbjct: 328 THTFDFQHVADAISLF 343

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 119/309 (38%), Gaps = 45/309 (14%)
Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMC-DLLRINTDR 72
           P + GHEA G V  VG+ V  L+ GD V       C+ C  C   + N+C DL    T  
Sbjct: 61  PMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPP 120
Query: 73  GVMINDGQ-SRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 131
               +DG  +R+ +      H +  +   E         A + P         LS G+  
Sbjct: 121 ----DDGNLARYYVHAADFCHKLPDNVSLEEG-------ALLEP---------LSVGVHA 160
Query: 132 GFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG-- 189
              A V +     G +V +              +  GA  ++    +P R   AK  G  
Sbjct: 161 CRRAGVQL-----GTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGAD 214
Query: 190 VTEFVNPKDYDKP-----VQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL 244
           VT  V+P   ++      ++  I D+ N  +D    C+G+ + +         G G  +L
Sbjct: 215 VTLVVDPAKEEESSIIERIRSAIGDLPNVTID----CSGNEKCITIGINITRTG-GTLML 269
Query: 245 VGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVP 304
           VG+ ++     T P  L+N    +      ++  +D P  +E   +    V++ +TH+  
Sbjct: 270 VGMGSQ---MVTVP--LVNACAREIDIKSVFRYCNDYPIALEMVASGRCNVKQLVTHSFK 324
Query: 305 FSEINKAFD 313
             +   AF+
Sbjct: 325 LEQTVDAFE 333

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/271 (21%), Positives = 97/271 (35%), Gaps = 29/271 (10%)
Query: 8   GQTPL---FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMC 63
           G  PL    P + GHE  G+V  +GE V   + GD+  +    G C  C +C     + C
Sbjct: 52  GDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNC 111
Query: 64  DLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVC 123
                + D     +DG                  +F +Y        A I     L +V 
Sbjct: 112 P----HADLSGYTHDG------------------SFQQYATADAVQAAHIPQGTDLAQVA 149
Query: 124 VLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFN 183
            + C   T + A +  A    G  VAI                +   R++G+D    +  
Sbjct: 150 PILCAGITVYKA-LKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE 208
Query: 184 EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAV 243
             +  G   F++    +K +   +   T+GG    +  + S  A+ ++   V    G  V
Sbjct: 209 LFRSIGGEVFIDFTK-EKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTV 266
Query: 244 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGN 274
           LVG+P            ++   ++ G++ GN
Sbjct: 267 LVGMPAGAKCCSDVFNQVVKSISIVGSYVGN 297

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 121/305 (39%), Gaps = 40/305 (13%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
            P I GHE  G +  VGE +  ++ GD+V+   T     C +C   + N+C         
Sbjct: 59  LPIILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNIC--------- 108
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVG-CVAKINPAAPLDKVCVLSCGIST 131
                        K + I        FSEY +      + K+N  +P++   +   G +T
Sbjct: 109 -------------KNQIIPGQTTNGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAG-TT 154
Query: 132 GFGATVNVAKP---KKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKF 188
             GA +  A P   K  + V I                +    I  V +  SR  + + F
Sbjct: 155 SMGA-IRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGI--SRSKKHRDF 211
Query: 189 GVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
            +    +     K  + +I  +T+G G   +++  G+ +   +  + +    G  +LVG+
Sbjct: 212 ALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGM 270
Query: 248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSE 307
             K  + +     + N++ L      NY   +DL  VV   +++  +++ +I   VP  +
Sbjct: 271 EGKRVSLEAFDTAVWNKKLLG----SNYGSLNDLEDVVR--LSESGKIKPYIIK-VPLDD 323
Query: 308 INKAF 312
           INKAF
Sbjct: 324 INKAF 328

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/303 (21%), Positives = 109/303 (35%), Gaps = 40/303 (13%)
Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP +   +  G+VE+VG+ VT  +PGD V+  F                  D LR  T R
Sbjct: 83  FPFVPASDXSGVVEAVGKSVTRFRPGDRVISTFA-------------PGWLDGLRPGTGR 129
Query: 73  GVMINDGQSRFSIKGKPIYHFVGTS---TFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
                           P Y  +G +     SEY V   G       +    +   L C  
Sbjct: 130 ---------------TPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAG 174
Query: 130 STGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFG 189
            T + A V     + G  V +              + +GA  I+    +  + + A   G
Sbjct: 175 LTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIV-TSSSREKLDRAFALG 233
Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
               +N  + D  V++V A   + G D  +E  G      S      DG  ++V+  +  
Sbjct: 234 ADHGINRLEEDW-VERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDG-RISVIGVLEG 291
Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
            + +    P+ LL    ++G   G+ +   DL   V++     L ++  I     F+E+ 
Sbjct: 292 FEVSGPVGPL-LLKSPVVQGISVGHRRALEDLVGAVDR-----LGLKPVIDXRYKFTEVP 345
Query: 310 KAF 312
           +A 
Sbjct: 346 EAL 348

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	329
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	0.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	0.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	0.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	0.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	0.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-161
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-133
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	1e-61
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	1e-61
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-61
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	2e-60
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-58
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	2e-56
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-55
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	6e-55
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	1e-53
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	7e-53
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-49
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	4e-49
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	7e-46
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	8e-46
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	3e-45
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-44
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	9e-44
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	4e-40
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-39
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	4e-39
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	3e-23
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	3e-22
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	3e-22
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	4e-21
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	2e-20
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	7e-20
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	9e-20
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	5e-18
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-17
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	3e-17
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	2e-16
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-12
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	4e-10
3gms_A	340	Putative NADPH:quinone reductase; structural genom	5e-10
4eye_A	342	Probable oxidoreductase; structural genomics, niai	3e-09
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-08
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-08
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	6e-08
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	6e-08
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	7e-08
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	8e-08
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	9e-08
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	2e-07
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	2e-07
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	3e-07
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	4e-07
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	1e-06
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	3e-06
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	1e-05
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-05

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  565 bits (1458), Expect = 0.0
 Identities = 167/320 (52%), Positives = 227/320 (70%), Gaps = 1/320 (0%)

Query: 8   GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR 67
                FP I GH   GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R
Sbjct: 55  DPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIR 114

Query: 68  INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSC 127
           +   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L C
Sbjct: 115 VTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGC 173

Query: 128 GISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK 187
           GISTG+GA VN AK + G   A+FGLG VGLA   G +V+GASRIIGVD+N  +F  AK+
Sbjct: 174 GISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 233

Query: 188 FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
           FG TE +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV
Sbjct: 234 FGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGV 293

Query: 248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSE 307
               +   T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH + F E
Sbjct: 294 AASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDE 353

Query: 308 INKAFDLMLAGESIRCIIRM 327
           INKAF+LM +G+SIR ++++
Sbjct: 354 INKAFELMHSGKSIRTVVKI 373

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  562 bits (1451), Expect = 0.0
 Identities = 156/314 (49%), Positives = 217/314 (69%), Gaps = 1/314 (0%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
            P I GHEA GIVES+GEGVT ++PGD V+P+FT +C +C  C   E N C    ++  R
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           G M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG STG
Sbjct: 121 GTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179

Query: 133 FGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           +G+ V VAK  +G + A+FGLG VGL+   G + +GA+RIIGVD+N  +F +AK+ G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239

Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
            VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  + +GV+V+VGVP    
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299

Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
               +PM LL+ RT KG  FG +K +  +P +V  +M K+  ++  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359

Query: 313 DLMLAGESIRCIIR 326
           DL+ +GESIR I+ 
Sbjct: 360 DLLRSGESIRTILT 373

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  555 bits (1433), Expect = 0.0
 Identities = 139/321 (43%), Positives = 207/321 (64%), Gaps = 5/321 (1%)

Query: 9   QTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR- 67
           +  LFP + GHE  GIVESVG GVT+ +PGD V+P F  +CK C  C S  +N+C  LR 
Sbjct: 57  KKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRN 116

Query: 68  --INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
               T    ++ D  SRF+ KG+ IYHF+G S+FS+YTV     +A+++  A L++VC++
Sbjct: 117 FKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLI 176

Query: 126 SCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA 185
            CG S+G+GA +N AK   G + A+FGLG VGL+A  G +++GASRII +D+N  +F +A
Sbjct: 177 GCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA 236

Query: 186 KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245
           K  G T+ +NP++ DKPVQ VI ++T GGVD S++C G+ Q + +A +C   GWG   +V
Sbjct: 237 KALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVV 296

Query: 246 GVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPF 305
           G    +       ++++  R++ GTFFG +K    +P++V  Y NK+ +++  +TH +PF
Sbjct: 297 GAKVDE--MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354

Query: 306 SEINKAFDLMLAGESIRCIIR 326
             IN A DLM  G+SIR I+ 
Sbjct: 355 ESINDAIDLMKEGKSIRTILT 375

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  554 bits (1430), Expect = 0.0
 Identities = 157/320 (49%), Positives = 217/320 (67%), Gaps = 2/320 (0%)

Query: 8   GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR 67
                FP + GHE  GIVESVG GVT+ QPG+ V+P+F  +C EC  C S ++N C    
Sbjct: 57  KHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGW 116

Query: 68  INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSC 127
            N    VM +  ++RF+ KG+ +  F+GTSTFS+YTV +   VAKI+P+APLD VC+L C
Sbjct: 117 ANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGC 175

Query: 128 GISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK 187
           G+STGFGA VN AK + G + A+FGLGAVGLAA  G   +GA RII VDLNP +F +AK 
Sbjct: 176 GVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235

Query: 188 FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 247
           FG T+FVNP D+ +P+ QV++ MTNGGVD S+EC G+V  M +A E    GWGV+VLVG 
Sbjct: 236 FGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGW 295

Query: 248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSE 307
            +  D   T P+ L+  RT KG+ FG +K +  +P +V+ Y++K++++++FITH +P   
Sbjct: 296 TDLHD-VATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLES 354

Query: 308 INKAFDLMLAGESIRCIIRM 327
           +N A DLM  G+ IR ++ +
Sbjct: 355 VNDAIDLMKHGKCIRTVLSL 374

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  545 bits (1406), Expect = 0.0
 Identities = 141/314 (44%), Positives = 208/314 (66%), Gaps = 3/314 (0%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
           FP I GHEA G+VES+G GVT ++PGD V+P+F  +C  C  C S  SN C+   +    
Sbjct: 62  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTG 132
           G+M  D  SRF+ +GKPIY+ +GTSTF+EYTV     VAKI+P APL+  C++ CG +TG
Sbjct: 122 GLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATG 179

Query: 133 FGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE 192
           +GA VN AK   G + A+FGLG VG +A  G + +GASRIIGV  +  +F +A + G TE
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239

Query: 193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD 252
            +NPKDYDKP+ +VI + TNGGVD +VEC G ++ M++A +  + G GV V++G+ + ++
Sbjct: 240 CLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNE 299

Query: 253 AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAF 312
                P+ LL  R+LKG+ FG +K   ++  +V+ YM K++ V   ++  +   +INKAF
Sbjct: 300 RLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAF 358

Query: 313 DLMLAGESIRCIIR 326
           +L+ +G+ +R I+ 
Sbjct: 359 ELLSSGQGVRSIMI 372

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  454 bits (1170), Expect = e-161
 Identities = 95/318 (29%), Positives = 152/318 (47%), Gaps = 9/318 (2%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
            P + GHE  GI+E++G  VT+LQ GDHV+  +   C +C  C++     C         
Sbjct: 59  LPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFS 117

Query: 73  GVMINDGQSRFSIKGKPIY--HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
           G    +G        + +   HF   S+F+ Y ++      K+    P++ +  L CGI 
Sbjct: 118 GADS-EGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQ 176

Query: 131 TGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV 190
           TG GA +N  K     S   +G GAVGL+A   A+V GAS II VD+  SR   AK+ G 
Sbjct: 177 TGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA 236

Query: 191 TEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK 250
           T  +N K  D      I ++T+GGV+ ++E TGS + +    + +    G   +VG P  
Sbjct: 237 THVINSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQL 293

Query: 251 DDAFKTHPMNLL-NERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN 309
               +    +LL   +T+ G   G+  P+  +P +V  Y   +   ++ +     F EIN
Sbjct: 294 GTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEIN 352

Query: 310 KAFDLMLAGESIRCIIRM 327
           +A      G +++ II++
Sbjct: 353 QAAIDSRKGITLKPIIKI 370

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  383 bits (987), Expect = e-133
 Identities = 90/332 (27%), Positives = 140/332 (42%), Gaps = 29/332 (8%)

Query: 9   QTPLFPRIFGHEAGGIVESVGEGVTD-----LQPGDHVLPVFTGECKECPHC-HSEESNM 62
                P I GHE  G V  V     D     L+PGD ++      C EC  C  S+E  +
Sbjct: 67  PRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYL 126

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVG-CVAKINPAAPLDK 121
           C        +   IN G S +        H  G   +S + V      V K++    LD 
Sbjct: 127 CP-----NRKVYGINRGCSEYP-------HLRGC--YSSHIVLDPETDVLKVSEKDDLDV 172

Query: 122 VCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSR 181
           + +  C  +T + A     +   G++V I G G +GL     AR  GA  +I +  +P+R
Sbjct: 173 LAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNR 232

Query: 182 FNEAKKFGVTEFVNPKDYD-KPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGW 239
              A++ G    +N ++   +  ++ I D+T+G G D  +E TG  +A++   E +  G 
Sbjct: 233 LKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG- 291

Query: 240 GVAVLVGVPNKDDAFKTHPMNLLNERTLKG-TFFGNY-KPRSDLPSVVEKYMNKELEVEK 297
           G   + GV    D     P  +     LK  TF G +    S     V         + K
Sbjct: 292 GFYSVAGVAVPQDPV---PFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSK 348

Query: 298 FITHTVPFSEINKAFDLMLAGESIRCIIRMDG 329
            ITH +P  E NKA +LM + E+++ I+  +G
Sbjct: 349 LITHRLPLKEANKALELMESREALKVILYPEG 380

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  199 bits (508), Expect = 1e-61
 Identities = 65/319 (20%), Positives = 102/319 (31%), Gaps = 31/319 (9%)

Query: 4   DKRWGQTPL-FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           D    Q     P   GHE  G V  +GEGVT    GD V       C  C  C     N 
Sbjct: 46  DMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENY 105

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           C                  R +  G          + +EY +                  
Sbjct: 106 CT-----------------RAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAA 148

Query: 123 CVLSC-GISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSR 181
             L+  G++     +  +     G +  + G+G +G    +  R   A+R+I VDL+  R
Sbjct: 149 APLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDR 208

Query: 182 FNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWG 240
              A++ G    V            I ++T G G     +  G+   + +A + V    G
Sbjct: 209 LALAREVGADAAVKS---GAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-G 264

Query: 241 VAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFIT 300
              +VG+       K     +    ++   ++G    RS+L  VV       L      T
Sbjct: 265 HISVVGIHA-GAHAKVGFFMIPFGASVVTPYWGT---RSELMEVVALARAGRL---DIHT 317

Query: 301 HTVPFSEINKAFDLMLAGE 319
            T    E   A+  +  G 
Sbjct: 318 ETFTLDEGPAAYRRLREGS 336

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  198 bits (507), Expect = 1e-61
 Identities = 68/332 (20%), Positives = 122/332 (36%), Gaps = 49/332 (14%)

Query: 8   GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVL--PVFTGECKECPHCHSEESNMCDL 65
                +P   GHE  G +++VG GV DL PGD V   P+    C  CP C     + C  
Sbjct: 48  NGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLP--CFTCPECLKGFYSQC-- 103

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTS---TFSEYTVTHVGCVAKINPAAPLDKV 122
                                    Y F+G+     F+EY V     V  +    P++  
Sbjct: 104 -----------------------AKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDG 140

Query: 123 CV---LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP 179
                ++ G+        ++A+  + ++V I G G +GL A + A   GA  +  +D++ 
Sbjct: 141 AFIEPITVGL-----HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISS 195

Query: 180 SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDG 238
            +   AK FG  +  N  +      Q+ + +         +E  G  Q +  A E     
Sbjct: 196 EKLALAKSFGAMQTFNSSEMS--APQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH 253

Query: 239 WGVAVLVGVPNKDDAFKTHPMNLL--NERTLKGTF--FGNYKPRSDLPSVVEKYMNKELE 294
                LVG  ++D    +     +   E T+ G++  + +  P  +  +       ++L 
Sbjct: 254 -AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLS 312

Query: 295 VEKFITHTVPFSEINKAFDLML-AGESIRCII 325
           +E  I H   F    +A   +       + ++
Sbjct: 313 LEPLIAHRGSFESFAQAVRDIARNAMPGKVLL 344

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  199 bits (508), Expect = 2e-61
 Identities = 72/336 (21%), Positives = 124/336 (36%), Gaps = 51/336 (15%)

Query: 6   RWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVL--PVFTGECKECPHCHSEESNMC 63
                   P   GHE  GIV   G  V D+ PG  +   P  +  C  CP C +   N+C
Sbjct: 68  HGEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNIS--CGRCPQCQAGRVNLC 125

Query: 64  DLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTST---FSEYTVTHVGCVAKINPAAPLD 120
             LR                          +G      F+EY +       +I       
Sbjct: 126 RNLR-------------------------AIGIHRDGGFAEYVLVPRKQAFEIPLTLDPV 160

Query: 121 KVCV---LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL 177
                  L+C +       V+++  K G +VAI G G +GL   + AR++GA+ +I    
Sbjct: 161 HGAFCEPLACCL-----HGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTR 215

Query: 178 NPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG---GVDRSVECTGSVQAMISAFEC 234
             ++   A++ G T  V+P   D  V + IA        GVD  +EC G  + +  +   
Sbjct: 216 QATKRRLAEEVGATATVDPSAGD--VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRL 273

Query: 235 VHDGWGVAVLVGVPNKDDAFKTHPMNLL-NERTLKGTFFGNYKPRSDLPSVVEKYMNKEL 293
              G G  V++GV  + +  +  P ++L  E  + G+F   +          +      +
Sbjct: 274 AKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPF----VHRRAADLVATGAI 328

Query: 294 EVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMDG 329
           E+++ I+  +   E         A   ++ ++    
Sbjct: 329 EIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSA 364

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  196 bits (500), Expect = 2e-60
 Identities = 79/331 (23%), Positives = 131/331 (39%), Gaps = 51/331 (15%)

Query: 6   RWGQTPL-FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGE----CKECPHCHSEES 60
            W +  +  P + GHE  G+VE+VG GV   Q GDHV    + E    C  CP C +   
Sbjct: 49  AWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHV----SLESHIVCHACPACRTGNY 104

Query: 61  NMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTS---TFSEYTVTHVGCVAKINPAA 117
           ++C   +                          +G      F+EY V             
Sbjct: 105 HVCLNTQ-------------------------ILGVDRDGGFAEYVVVPAENAWVNPKDL 139

Query: 118 PLDKVCV---LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIG 174
           P +   +       +      TV       G+SV I G G +GL AA   R SGA  I+ 
Sbjct: 140 PFEVAAILEPFGNAV-----HTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILV 194

Query: 175 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFEC 234
            D NP R   A+ +     VNP + D  + +V+  +T  GV+  +E +G+  A+      
Sbjct: 195 SDPNPYRLAFARPYA-DRLVNPLEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMA 251

Query: 235 VHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELE 294
           +  G G A ++G+P+    F      ++   T  G      +             +  ++
Sbjct: 252 LIPG-GEARILGIPSDPIRFDLAGELVMRGITAFGIA--GRRLWQTWMQGTALVYSGRVD 308

Query: 295 VEKFITHTVPFSEINKAFDLMLAGESIRCII 325
           +   +TH +P S   +AF L+ +G++++ I+
Sbjct: 309 LSPLLTHRLPLSRYREAFGLLASGQAVKVIL 339

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  191 bits (487), Expect = 1e-58
 Identities = 81/333 (24%), Positives = 136/333 (40%), Gaps = 53/333 (15%)

Query: 6   RWGQTPL-FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGE----CKECPHCHSEES 60
            W Q+ +  P+I GHE  G V  +G GV  ++ GD+V    + E    C +C  C   + 
Sbjct: 53  EWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYV----SVETHIVCGKCYACRRGQY 108

Query: 61  NMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTST---FSEYTVTHVGCVAKINPAA 117
           ++C   +                           G  T   F+EY V     + K   + 
Sbjct: 109 HVCQNTK-------------------------IFGVDTDGVFAEYAVVPAQNIWKNPKSI 143

Query: 118 PLDKVCV---LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIG 174
           P +   +   L   +      TV    P  G+SV I G G +GL     A+ SGA  +I 
Sbjct: 144 PPEYATLQEPLGNAV-----DTVLAG-PISGKSVLITGAGPLGLLGIAVAKASGAYPVIV 197

Query: 175 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFE 233
            + +  R   AKK G    +NP + D  V + + D+T+G GVD  +E +G+ +A+    +
Sbjct: 198 SEPSDFRRELAKKVGADYVINPFEED--VVKEVMDITDGNGVDVFLEFSGAPKALEQGLQ 255

Query: 234 CVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEL 293
            V    G   L+G+         + + +    T+ G             +V     + +L
Sbjct: 256 AVTPA-GRVSLLGLYPGKVTIDFNNLIIFKALTIYGIT--GRHLWETWYTVSRLLQSGKL 312

Query: 294 EVEKFITHTVP-FSEINKAFDLMLAGESIRCII 325
            ++  ITH    F +  +AF+LM AG++ + + 
Sbjct: 313 NLDPIITHKYKGFDKYEEAFELMRAGKTGKVVF 345

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  185 bits (473), Expect = 2e-56
 Identities = 69/337 (20%), Positives = 125/337 (37%), Gaps = 55/337 (16%)

Query: 6   RWGQTPL-FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGE----CKECPHCHSEES 60
           R G   +  P + GHEA G VE VG  V  L+PGD V      E     +    C     
Sbjct: 55  RIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRV----AIEPGAPRENDEFCKMGRY 110

Query: 61  NMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLD 120
           N+   +          +DG                      +   +     K+      +
Sbjct: 111 NLSPSIFF---CATPPDDG------------------NLCRFYKHNAAFCYKLPDNVTFE 149

Query: 121 K-VCV--LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL 177
           +   +  LS GI               G  V + G G +G+     A+  GA++++  DL
Sbjct: 150 EGALIEPLSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDL 204

Query: 178 NPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN---GGVDRSVECTGSVQAMISAFEC 234
           + +R ++AK+ G    +         Q++   +        + ++ECTG+  ++ +    
Sbjct: 205 SATRLSKAKEIGADLVLQISKES--PQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYA 262

Query: 235 VHDGWGVAVLVGVPNKDDAFKTHPMNLL--NERTLKGTF-FGNYKPRSDLPSVVEKYMNK 291
              G G  VLVG+ ++       P+      E  +KG F + N       P  +    +K
Sbjct: 263 TRSG-GTLVLVGLGSEMTTV---PLLHAAIREVDIKGVFRYCN-----TWPVAISMLASK 313

Query: 292 ELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 328
            + V+  +TH  P  +  +AF+    G  ++ +++ D
Sbjct: 314 SVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCD 350

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  185 bits (471), Expect = 1e-55
 Identities = 67/338 (19%), Positives = 113/338 (33%), Gaps = 60/338 (17%)

Query: 13  FPRIFGHEAGGIVESVGEGVTD------LQPGDHVL--PVFTGECKECPHCHSEESNMCD 64
           FP   GHE  G+V   G    +       + G+ V    +    C  C  C     N C+
Sbjct: 91  FPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLW--CGHCRPCAEGFPNHCE 148

Query: 65  LLRINTDRGVMINDGQSRFSIKGKPIYHFVGTS---TFSEYTVTHVGCVAKINPAAPLDK 121
            L                           +G +    F+EY          +     + +
Sbjct: 149 NLN-------------------------ELGFNVDGAFAEYVKVDAKYAWSLRELEGVYE 183

Query: 122 VCV----------LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR 171
                         S          V     + G +V I G G +GLAA    + +GAS+
Sbjct: 184 GDRLFLAGSLVEPTSVAY---NAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASK 240

Query: 172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMIS 230
           +I  + +  R N AK+ G    ++P   +    + + D TNG G    +E TG  Q +  
Sbjct: 241 VILSEPSEVRRNLAKELGADHVIDPTKEN--FVEAVLDYTNGLGAKLFLEATGVPQLVWP 298

Query: 231 AFECV-HDGWGVAVLVGVPNKDDAFKTHPMNLL--NERTLKGTFFGNYKPRSDLPSVVEK 287
             E V     G+   V +  + DA       +       + G+    +      P V+  
Sbjct: 299 QIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQ--GHSGHGTFPRVIS- 355

Query: 288 YMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 325
            M   +++ K I+ TV   EI +    +   +S+  + 
Sbjct: 356 LMASGMDMTKIISKTVSMEEIPEYIKRLQTDKSLVKVT 393

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  182 bits (463), Expect = 6e-55
 Identities = 63/337 (18%), Positives = 116/337 (34%), Gaps = 56/337 (16%)

Query: 6   RWGQTPL-FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGE----CKECPHCHSEES 60
             G   +    + GHE+ G V +V   V  ++ GD V      E    C  C  C +   
Sbjct: 64  CIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRV----AIEPQVICNACEPCLTGRY 119

Query: 61  NMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLD 120
           N C+ +            G                      Y         KI      +
Sbjct: 120 NGCERVDF---LSTPPVPG------------------LLRRYVNHPAVWCHKI-GNMSYE 157

Query: 121 KVCV---LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL 177
              +   LS  +     A +  A  + G  V I G G +GL     A+ +GA  ++  D+
Sbjct: 158 NGAMLEPLSVAL-----AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDI 212

Query: 178 NPSRFNEAKKFGVTEFVNPKD---YDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFEC 234
           +  R   AK+       +  +    ++  ++++          ++ECTG   ++ +A   
Sbjct: 213 DEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWA 272

Query: 235 VHDGWGVAVLVGVPNKDDAFKTHPMNLL--NERTLKGTF-FGNYKPRSDLPSVVEKYMNK 291
           V  G G   ++GV   +      P       E  L+  + + N       P  +    N 
Sbjct: 273 VKFG-GKVFVIGVGKNEIQI---PFMRASVREVDLQFQYRYCN-----TWPRAIRLVENG 323

Query: 292 ELEVEKFITHTVPFSEINKAFDLMLAGES--IRCIIR 326
            +++ + +TH  P  +  KAF+     ++  I+  I+
Sbjct: 324 LVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQ 360

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  178 bits (454), Expect = 1e-53
 Identities = 74/315 (23%), Positives = 111/315 (35%), Gaps = 44/315 (13%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
             I GHEA G V  VG  V D +PGD V+                       +       
Sbjct: 54  NMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFS 113

Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYT-VTH--VGCVAKINPAAPLDKVCVLSCGIS 130
            + +                       E+  V    +     +    PL+   ++   ++
Sbjct: 114 NVKDGVFG-------------------EFFHVNDADMNLA-HLPKEIPLEAAVMIPDMMT 153

Query: 131 TGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV 190
           TGF      A  K G +V + G+G VGL +  GA   GA RI  V       + A ++G 
Sbjct: 154 TGFHGAEL-ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA 212

Query: 191 TEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
           T+ +N K+ D  V+Q++   T+G GVD+ V   G V     A + +  G      V    
Sbjct: 213 TDIINYKNGD-IVEQIL-KATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLG 269

Query: 250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYM--------NKELEVEKFITH 301
           +         N+   R+  G   G+      L       M         K ++  K +TH
Sbjct: 270 E-------GDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRVDPSKLVTH 322

Query: 302 TVP-FSEINKAFDLM 315
               F  I KAF LM
Sbjct: 323 VFRGFDNIEKAFMLM 337

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  176 bits (449), Expect = 7e-53
 Identities = 71/314 (22%), Positives = 122/314 (38%), Gaps = 39/314 (12%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINT 70
           P  P   GHE  G +E V EGV  L+ GD V+         C  C + E   C+ L    
Sbjct: 71  PKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFP- 129

Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDK---VCVLSC 127
             G+ I DG                   F+E+  T    V K+      +K   +  L+ 
Sbjct: 130 --GLNI-DG------------------GFAEFMRTSHRSVIKLPKDISREKLVEMAPLAD 168

Query: 128 GISTGFGAT-VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK 186
              T + A          G  VAI G+G +G  A +  +V   + +I +D+   +   A+
Sbjct: 169 AGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE 228

Query: 187 KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG 246
           + G    V+ +    PV+QV+      GV+ +++  GS   +      +    G  ++VG
Sbjct: 229 RLGADHVVDAR--RDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVG 285

Query: 247 VPNKDDAFKTHPMNL-LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPF 305
              +    +   + +  +E + +G+  GN     +L  +V   +  ++ VE         
Sbjct: 286 YGGE---LRFPTIRVISSEVSFEGSLVGN---YVELHELVTLALQGKVRVE---VDIHKL 336

Query: 306 SEINKAFDLMLAGE 319
            EIN   + +  GE
Sbjct: 337 DEINDVLERLEKGE 350

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  168 bits (427), Expect = 1e-49
 Identities = 69/333 (20%), Positives = 121/333 (36%), Gaps = 59/333 (17%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVL--PVFTGECKECPHCHSEESNMCDLLRINTD 71
           P + GHEA G V  VG+ V  L+ GD V   P     C+ C  C   + N+C  L     
Sbjct: 61  PMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVP--CRRCQFCKEGKYNLCPDLT---- 114

Query: 72  RGVMINDGQSRFSIKGKPIYHFVGTS----TFSEYTVTHVGCVAKINPAAPLDK-VCV-- 124
                                F  T       + Y V       K+     L++   +  
Sbjct: 115 ---------------------FCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEP 153

Query: 125 LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE 184
           LS G+          A  + G +V + G G +GL +   A+  GA  ++    +P R   
Sbjct: 154 LSVGV-----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEV 207

Query: 185 AKKFGVTEFVNPKDYDKPVQQVIADMTNG---GVDRSVECTGSVQAMISAFECVHDGWGV 241
           AK  G    +      +    +I  + +      + +++C+G+ + +         G G 
Sbjct: 208 AKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GT 266

Query: 242 AVLVGVPNKDDAFKTHPMNLL--NERTLKGTF-FGNYKPRSDLPSVVEKYMNKELEVEKF 298
            +LVG+ ++       P+      E  +K  F + N     D P  +E   +    V++ 
Sbjct: 267 LMLVGMGSQMVTV---PLVNACAREIDIKSVFRYCN-----DYPIALEMVASGRCNVKQL 318

Query: 299 ITHTVPFSEINKAFDLML--AGESIRCIIRMDG 329
           +TH+    +   AF+     A  +I+ +I    
Sbjct: 319 VTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ 351

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  166 bits (423), Expect = 4e-49
 Identities = 69/311 (22%), Positives = 118/311 (37%), Gaps = 34/311 (10%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINT 70
              P   GHE  G +E VG+ V     GD V          C +C   E ++CD  R   
Sbjct: 60  VKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL- 118

Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
             G+   DG                   ++EY +                +   L+C   
Sbjct: 119 --GINF-DG------------------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGI 157

Query: 131 TGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189
           T + A V  A     +++ + G  G +G  A + A+    + IIGVD+       AK+ G
Sbjct: 158 TTYRA-VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAG 216

Query: 190 VTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN 249
               +N    D P+ ++     + GVD  ++   S + +    + +    G  V+VG+  
Sbjct: 217 ADYVINASMQD-PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLF- 273

Query: 250 KDDAFKTHPMNL-LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEI 308
                  H   + L+E    G+  GN   +SD   ++   + +  +V+  IT T+   E 
Sbjct: 274 -GADLHYHAPLITLSEIQFVGSLVGN---QSDFLGIMR--LAEAGKVKPMITKTMKLEEA 327

Query: 309 NKAFDLMLAGE 319
           N+A D +   +
Sbjct: 328 NEAIDNLENFK 338

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  158 bits (401), Expect = 7e-46
 Identities = 62/319 (19%), Positives = 117/319 (36%), Gaps = 42/319 (13%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLL 66
             Q    P I GHE  G +  VGE +  ++ GD+V+   T     C +C   + N+C   
Sbjct: 53  AKQGFRLPIILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQ 111

Query: 67  RINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLS 126
            I    G    +G                   FSEY +           +    +   L+
Sbjct: 112 IIP---GQTT-NG------------------GFSEYMLVKSSRWLVKLNSLSPVEAAPLA 149

Query: 127 CGISTGFGA---TVNVAKPKKGQSVAIFGLGAVGLAAAEGAR-VSGASRIIGVDLNPSRF 182
              +T  GA    +          V + G+G + +   +  + +     I+G+  +    
Sbjct: 150 DAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHR 209

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGV 241
           + A + G       KD     + +I  +T+G G   +++  G+ +   +  + +    G 
Sbjct: 210 DFALELGADYVSEMKD----AESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GA 264

Query: 242 AVLVGVPNKDDAFKTHPMNL-LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFIT 300
            +LVG+            +  +  + L G+ +G+    +DL  VV    + +++      
Sbjct: 265 IILVGME--GKRVSLEAFDTAVWNKKLLGSNYGS---LNDLEDVVRLSESGKIKP---YI 316

Query: 301 HTVPFSEINKAFDLMLAGE 319
             VP  +INKAF  +  G 
Sbjct: 317 IKVPLDDINKAFTNLDEGR 335

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  159 bits (404), Expect = 8e-46
 Identities = 72/355 (20%), Positives = 122/355 (34%), Gaps = 48/355 (13%)

Query: 8   GQTPLFP-RIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLL 66
           G+  +    + GHE  G V   G  V  +  GD V   F   C  C +C    S++C+  
Sbjct: 54  GRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENN 113

Query: 67  RINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYT-VTH--VGCVA---KINPAAPLD 120
            +N D  +            G  +  + G    +EY  V +     +    K      + 
Sbjct: 114 LVNPDADL---------GAFGFDLKGWSGGQ--AEYVLVPYADYMLLKFGDKEQAMEKIK 162

Query: 121 KVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS 180
            + ++S  + TGF   V+ A  K G  V I G G VG  AA GAR+ GA+ +I  D NP 
Sbjct: 163 DLTLISDILPTGFHGCVS-AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPE 221

Query: 181 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTG--------------SV 225
           R       G    ++ ++   P++  I  +     VD  V+  G                
Sbjct: 222 RLKLLSDAGFET-IDLRNSA-PLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPN 279

Query: 226 QAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLK-GTFF--------GNYK 276
            A+ S F+ V  G  + +  G+    D    +         L  G  +        G   
Sbjct: 280 GALNSLFDVVRAGGAIGI-PGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP 338

Query: 277 PRSDLPSVVEKYMNKELE--VEKFITHTVPFSEINKAFDLMLAGESIRCIIRMDG 329
             +    + E  +  ++    +      +   +    +     G   + +I   G
Sbjct: 339 VTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPAKFVIDPHG 393

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  156 bits (397), Expect = 3e-45
 Identities = 53/338 (15%), Positives = 94/338 (27%), Gaps = 51/338 (15%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINT 70
                + GHEA G+VE    G      GD V+PV    C  C +C     + C+      
Sbjct: 58  GKDFLVLGHEAIGVVEESYHGF---SQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGE 114

Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCV--LSCG 128
             G+   DG                     E+       + KI  +     +    L+  
Sbjct: 115 -AGIHKMDG------------------FMREWWYDDPKYLVKIPKSIEDIGILAQPLADI 155

Query: 129 ---------ISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP 179
                    +                + V + G G +G+      R  G    +     P
Sbjct: 156 EKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREP 215

Query: 180 SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS-VQAMISAFECVHDG 238
           +   +          N  +      ++    + G  D  ++ TG+ V  + +    +   
Sbjct: 216 TEVEQTVIEETK--TNYYNSSNGYDKLKD--SVGKFDVIIDATGADVNILGNVIPLLGRN 271

Query: 239 WGVAVLVGVPNKDDAFKTHPMNL----LNERTLKGTFFGNYKPRSDLPSVVE----KYMN 290
            GV  L G      +       L       +T+ G   G    +      V         
Sbjct: 272 -GVLGLFGFS-TSGSVPLDYKTLQEIVHTNKTIIGLVNGQ---KPHFQQAVVHLASWKTL 326

Query: 291 KELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 328
                +  IT TV  ++  +   ++   E     IR+ 
Sbjct: 327 YPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRIL 364

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  154 bits (392), Expect = 1e-44
 Identities = 64/338 (18%), Positives = 113/338 (33%), Gaps = 46/338 (13%)

Query: 6   RWGQTPL-FPRIFGHEAGGIVESVGEGVTDLQPGDHVL--PVFTGECKECPHCHSEESNM 62
             G        + GHEA G+V  V    T+L+ GD V+             +   ++ +M
Sbjct: 49  HGGFPEGEDHLVLGHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDM 106

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
                   +RG++   G                    SE+  +    + +I  +      
Sbjct: 107 APDGMY-FERGIVGAHG------------------YMSEFFTSPEKYLVRIPRSQAELGF 147

Query: 123 CV--LSCGISTGFGATVNV-AKPKKGQSVAIFGLGAVGLAAAEGARVS--GASRIIGV-- 175
            +  +S        A  +  A      S  + G G++GL      +V   G   +  +  
Sbjct: 148 LIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGR 207

Query: 176 -DLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFEC 234
            D      +  ++   T   + +    PV+ V        +D   E TG  +  I + + 
Sbjct: 208 RDRPDPTIDIIEELDATYVDSRQT---PVEDVPDVY--EQMDFIYEATGFPKHAIQSVQA 262

Query: 235 VHDGWGVAVLVGVPNKD----DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMN 290
           +    GV  L+GVP+      DA   H   +L+ + L G+   N        + V     
Sbjct: 263 LAPN-GVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSV--NSHVEHFEAATVTFTKL 319

Query: 291 KELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 328
            +  +E  +T   P SE   AFD      +I+  I   
Sbjct: 320 PKWFLEDLVTGVHPLSEFEAAFD--DDDTTIKTAIEFS 355

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  153 bits (390), Expect = 9e-44
 Identities = 70/356 (19%), Positives = 122/356 (34%), Gaps = 57/356 (16%)

Query: 8   GQTPLFP-RIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLL 66
           G+T      + GHE  G V   G  V +LQ GD V   F   C  C  C    + +C   
Sbjct: 55  GRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCL-- 112

Query: 67  RINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFS----EYT-VTH--VGCVA---KINPA 116
               +              +    Y +V    ++    EY  V +     +    +    
Sbjct: 113 --TVNPA------------RAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAM 158

Query: 117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVD 176
             +  +  LS  + TG+   V  A    G +V + G G VGLAAA  AR+ GA+ +I  D
Sbjct: 159 EKIRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGD 217

Query: 177 LNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTG------------ 223
           LNP+R   AK  G          D P+ + IA +     VD +V+  G            
Sbjct: 218 LNPARLAHAKAQGFEIADLSL--DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAK 275

Query: 224 ---SVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLK-GTFF------- 272
                  + S  +       + +  G+   +D         +   +++ G  +       
Sbjct: 276 HEAPATVLNSLMQVTRVAGKIGI-PGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFH 334

Query: 273 -GNYKPRSDLPSVVEKYMNKELEVEK-FITHTVPFSEINKAFDLMLAGESIRCIIR 326
            G         ++++  M   + + +      +   +  + +    AG   + +I 
Sbjct: 335 TGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPKKFVID 390

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  142 bits (361), Expect = 4e-40
 Identities = 83/329 (25%), Positives = 123/329 (37%), Gaps = 66/329 (20%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           W   P  P I GHE  G V +VG GV+ ++ GD V +P     C  C HC      +C+ 
Sbjct: 51  WPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEK 110

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
            +                       Y   G   + EY V     V  +       ++  +
Sbjct: 111 QQNTG--------------------YSVNG--GYGEYVVADPNYVGLLPDKVGFVEIAPI 148

Query: 126 SC-GISTGFGATVNVAKPKKGQSVAIFGLG-----AVGLAAAEGARVSGASRIIGVDLNP 179
            C G+ T +   + V   + GQ V I G+G     AV  A A G RV        VD++ 
Sbjct: 149 LCAGV-TVYKG-LKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRV------AAVDIDD 200

Query: 180 SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGW 239
           ++ N A++ G    VN +D D P   +  ++  GG    +    S +A   A   V  G 
Sbjct: 201 AKLNLARRLGAEVAVNARDTD-PAAWLQKEI--GGAHGVLVTAVSPKAFSQAIGMVRRG- 256

Query: 240 GVAVLVGVPNKDDAFKTHPMNL-LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKF 298
           G   L G+P  D  F T   ++ L   T++G+  G    RSDL            E   F
Sbjct: 257 GTIALNGLPPGD--FGTPIFDVVLKGITIRGSIVGT---RSDL-----------QESLDF 300

Query: 299 --------ITHTVPFSEINKAFDLMLAGE 319
                      T    ++N  F  +  G+
Sbjct: 301 AAHGDVKATVSTAKLDDVNDVFGRLREGK 329

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  141 bits (358), Expect = 1e-39
 Identities = 92/334 (27%), Positives = 135/334 (40%), Gaps = 57/334 (17%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           W   P  P I GHE  GIVE VG GVT L+ GD V +P     C  C +C S +  +C+ 
Sbjct: 49  WPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEH 108

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
            +                       Y   G   ++EY       V KI      ++   +
Sbjct: 109 QKNAG--------------------YSVDG--GYAEYCRAAADYVVKIPDNLSFEEAAPI 146

Query: 126 SC-GISTGFGATVNVAKPKKGQSVAIFGLG-----AVGLAAAEGARVSGASRIIGVDLNP 179
            C G+ T + A + V   K G+ VAI+G+G     AV  A A G  V      + VD+  
Sbjct: 147 FCAGV-TTYKA-LKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNV------VAVDIGD 198

Query: 180 SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGW 239
            +   AK+ G    VNP   D   + +      GGV  +V    S  A  SA+  +  G 
Sbjct: 199 EKLELAKELGADLVVNPLKED-AAKFMKE--KVGGVHAAVVTAVSKPAFQSAYNSIRRG- 254

Query: 240 GVAVLVGVPNKDDAFKTHPMNL-LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKF 298
           G  VLVG+P ++        +  LN   + G+  G    R DL   +      +   E  
Sbjct: 255 GACVLVGLPPEE--MPIPIFDTVLNGIKIIGSIVGT---RKDLQEAL------QFAAEGK 303

Query: 299 IT---HTVPFSEINKAFDLMLAGESI-RCIIRMD 328
           +       P  +IN+ FD ML G+   R ++ ++
Sbjct: 304 VKTIIEVQPLEKINEVFDRMLKGQINGRVVLTLE 337

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  140 bits (355), Expect = 4e-39
 Identities = 70/325 (21%), Positives = 116/325 (35%), Gaps = 54/325 (16%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           W      P + GHE  G+V  +GE V   + GD+  +    G C  C +C     + C  
Sbjct: 54  WPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPH 113

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
             ++                     Y   G  +F +Y        A I     L +V  +
Sbjct: 114 ADLSG--------------------YTHDG--SFQQYATADAVQAAHIPQGTDLAQVAPI 151

Query: 126 SC-GISTGFGATVNVAKPKKGQSVAIFGLG------AVGLAAAEGARVSGASRIIGVDLN 178
            C GI+  + A +  A    G  VAI G        AV  A A G RV      +G+D  
Sbjct: 152 LCAGITV-YKA-LKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRV------LGIDGG 203

Query: 179 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDG 238
             +    +  G   F++       V  V+   T+GG    +  + S  A+ ++   V   
Sbjct: 204 EGKEELFRSIGGEVFIDFTKEKDIVGAVLK-ATDGGAHGVINVSVSEAAIEASTRYVRAN 262

Query: 239 WGVAVLVGVPNKDDAFKTHPMNL-LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEK 297
            G  VLVG+P       +   N  +   ++ G++ GN   R+D    +      +     
Sbjct: 263 -GTTVLVGMP-AGAKCCSDVFNQVVKSISIVGSYVGN---RADTREAL------DFFARG 311

Query: 298 FIT---HTVPFSEINKAFDLMLAGE 319
            +      V  S + + ++ M  G+
Sbjct: 312 LVKSPIKVVGLSTLPEIYEKMEKGQ 336

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 98.7 bits (246), Expect = 3e-23
 Identities = 51/335 (15%), Positives = 101/335 (30%), Gaps = 57/335 (17%)

Query: 8   GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR 67
            +      + G +  G+V   G GV   +PGDHV+ V      E       +  +    R
Sbjct: 104 TRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVI-VHPAHVDEQEPATHGDGMLGTEQR 162

Query: 68  INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSC 127
                G   N G                    +EY V     +         ++  V   
Sbjct: 163 A---WGFETNFG------------------GLAEYGVVRASQLLPKPAHLTWEEAAVSPL 201

Query: 128 GISTGFGA--TVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE 184
              T +    +   A+ K+G  V I+G  G +G  A +  +  G    + V  +  +   
Sbjct: 202 CAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAA 260

Query: 185 AKKFGVTEFVNPKDYD----------------KPVQQVIADMTNGGVDRSVECTGSVQAM 228
            +  G    +N  +                  + + +++ +      D   E TG V   
Sbjct: 261 VRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFG 320

Query: 229 ISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNL----LNERTLKGTFFGNYKPRSDLPSV 284
           +S       G G  V  G  +       H  +     +  + + G+   N     +  + 
Sbjct: 321 LS-VIVARRG-GTVVTCGSSSGYL----HTFDNRYLWMKLKKIVGSHGAN---HEEQQAT 371

Query: 285 VEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE 319
              + +  +     ++   P +E  +A  ++    
Sbjct: 372 NRLFESGAVVPA--MSAVYPLAEAAEACRVVQTSR 404

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 94.6 bits (236), Expect = 3e-22
 Identities = 62/318 (19%), Positives = 108/318 (33%), Gaps = 44/318 (13%)

Query: 6   RWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDL 65
             G    FP +   +  G+VE+VG+ VT  +PGD V+  F     +     +  +   + 
Sbjct: 76  GMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYET 135

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVL 125
           L      G     G                    SEY V   G       +    +   L
Sbjct: 136 L------GGAH-PG------------------VLSEYVVLPEGWFVAAPKSLDAAEASTL 170

Query: 126 SCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA 185
            C   T + A V     + G  V + G G V L   + A+ +GA  +I    +  + + A
Sbjct: 171 PCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRA 229

Query: 186 KKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVL 244
              G    +N  + D    + +  +T   G D  +E  G    +  + + V    G   +
Sbjct: 230 FALGADHGINRLEED--WVERVYALTGDRGADHILEIAGG-AGLGQSLKAVAPD-GRISV 285

Query: 245 VGVPNKDDAFKTHPMNLLNER-TLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKF---IT 300
           +GV    +        LL +   ++G   G    R  L     + +   ++       I 
Sbjct: 286 IGVLEGFEV-SGPVGPLLLKSPVVQGISVG---HRRAL-----EDLVGAVDRLGLKPVID 336

Query: 301 HTVPFSEINKAFDLMLAG 318
               F+E+ +A   +  G
Sbjct: 337 MRYKFTEVPEALAHLDRG 354

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 94.2 bits (235), Expect = 3e-22
 Identities = 61/327 (18%), Positives = 111/327 (33%), Gaps = 49/327 (14%)

Query: 6   RWGQTPL---FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNM 62
           R G        P + G +  G+V++VG GV    PGD V+      C  C  C + E N+
Sbjct: 47  RKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNL 106

Query: 63  CDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV 122
           C   +I  +       G                  T++EY V     +A        ++ 
Sbjct: 107 CPRYQILGEH----RHG------------------TYAEYVVLPEANLAPKPKNLSFEEA 144

Query: 123 CVLSCGISTGFGATVNVAKPKKGQSVAIFG-LGAVGLAA-----AEGARVSGASRIIGVD 176
             +     T +   V+    + G  V +      V +AA       GARV   +      
Sbjct: 145 AAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG----- 199

Query: 177 LNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECV 235
            +  +   AK  G  E VN    D    + +  +T G G D+ V+ TG+        +  
Sbjct: 200 -SEDKLRRAKALGADETVNYTHPD--WPKEVRRLTGGKGADKVVDHTGA-LYFEGVIKAT 255

Query: 236 HDGWGVAVLVGVPNKDDAFKTHPMNLLNER-TLKGTFFGNYKPRSDLPSVVEKYMNKELE 294
            +G G   + G  +  +       ++   + ++ G+       +S L  ++      +L+
Sbjct: 256 ANG-GRIAIAGASSGYEG-TLPFAHVFYRQLSILGSTMA---SKSRLFPILRFVEEGKLK 310

Query: 295 VEKFITHTVPFSEINKAFDLMLAGESI 321
               +   +P     +   L+      
Sbjct: 311 P--VVGQVLPLEAAAEGHRLLEERRVF 335

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 92.6 bits (230), Expect = 4e-21
 Identities = 48/330 (14%), Positives = 93/330 (28%), Gaps = 53/330 (16%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINT 70
            L   + G +  G+V   G GV   Q GD V+        E    H++     +      
Sbjct: 115 DLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPE----QR 170

Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
             G   N G                    +E  +     +         ++        S
Sbjct: 171 IWGFETNFG------------------GLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNS 212

Query: 131 TGFGA--TVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK 187
           T +    + N A  K+G +V I+G  G +G  A + A   GA   I V  +P +    + 
Sbjct: 213 TAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRA 271

Query: 188 FGVTEFVNPKDYDKPVQ---------------QVIADMTNG-GVDRSVECTGSVQAMISA 231
            G    ++                        + I ++T G  +D   E  G  +   ++
Sbjct: 272 MGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR-ETFGAS 330

Query: 232 FECVHDGWGVAVLVGVPNKDDAFKTHPMN--LLNERTLKGTFFGNYKPRSDLPSVVEKYM 289
                 G G        +       +      ++ + + G+ F N     +         
Sbjct: 331 VFVTRKG-GTITTCASTSGYMH--EYDNRYLWMSLKRIIGSHFAN---YREAWEANRLIA 384

Query: 290 NKELEVEKFITHTVPFSEINKAFDLMLAGE 319
              +     ++      +  +A   +    
Sbjct: 385 KGRIHPT--LSKVYSLEDTGQAAYDVHRNL 412

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 89.2 bits (222), Expect = 2e-20
 Identities = 72/337 (21%), Positives = 114/337 (33%), Gaps = 81/337 (24%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           W +   +P I GHE  GI++ VG+GV   + GD V +  F   CK C  C   +   C  
Sbjct: 53  WKEGI-YPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT- 110

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTST---FSEYTVTHVGCVAKINPAAPLDKV 122
                         +  F+      +H         +S   V     V  ++  APL+KV
Sbjct: 111 --------------KVVFTYDCLDSFH-DNEPHMGGYSNNIVVDENYVISVDKNAPLEKV 155

Query: 123 CVLSCGISTGFGATV----NVAKPKKGQSVAIFGLG-----AVGLAAAEGARVSGASRII 173
             L C      G T       +K  KG  V + G G     AV  A A GA VS  +R  
Sbjct: 156 APLLCA-----GITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFAR-- 208

Query: 174 GVDLNPSRFNEAKKFGVTEFVN-PKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAF 232
               N  +  +A   GV  F   PK   + +  +I              T      +  +
Sbjct: 209 ----NEHKKQDALSMGVKHFYTDPKQCKEELDFII-------------STIPTHYDLKDY 251

Query: 233 ECVHDGWGVAVLVGVPNKDDAFKTHPMNLL--NERTLKGTFFGNYK---------PRSDL 281
             +    G   LVG+P  + A      + +    R + G+  G  K          + ++
Sbjct: 252 LKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNI 311

Query: 282 PSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAG 318
              ++                +   +I+ A+  +  G
Sbjct: 312 YPEID---------------LILGKDIDTAYHNLTHG 333

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 88.0 bits (219), Expect = 7e-20
 Identities = 75/349 (21%), Positives = 114/349 (32%), Gaps = 103/349 (29%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
            G +  +P + GHE  G V  VG  V+    GD V +    G C  C  C  +    C  
Sbjct: 58  LGMSN-YPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYC-- 114

Query: 66  LRINTDRGVM-INDGQSRFSIKGKPIYHFVGTST---FSEYTVTHVGCVAKINPAAPLDK 121
                 + +   ND             +  G  T   F++ TV H   V KI     +++
Sbjct: 115 -----PKKIWSYND------------VYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQ 157

Query: 122 VCVLSCGISTGFGATV-------NVAKPKKGQSVAIFGLG-----AVGLAAAEGARVSGA 169
              L C      G TV        + +P  G    I GLG      V +A A G  V+  
Sbjct: 158 AAPLLCA-----GVTVYSPLSHFGLKQP--GLRGGILGLGGVGHMGVKIAKAMGHHVTVI 210

Query: 170 SRIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAM 228
           S       +  +  EA +  G  ++V   D           M+        E   S+  +
Sbjct: 211 SS------SNKKREEALQDLGADDYVIGSDQA--------KMS--------ELADSLDYV 248

Query: 229 ISAFECVHDGW----------GVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYK-- 276
           I      H             G  +L+GV N    F T  + +L  + + G+F G+ K  
Sbjct: 249 IDTVPVHHA-LEPYLSLLKLDGKLILMGVINNPLQFLTPLL-MLGRKVITGSFIGSMKET 306

Query: 277 -------PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAG 318
                      L S++E                V    +N AF+ +   
Sbjct: 307 EEMLEFCKEKGLSSIIE---------------VVKMDYVNTAFERLEKN 340

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 87.6 bits (218), Expect = 9e-20
 Identities = 72/348 (20%), Positives = 117/348 (33%), Gaps = 101/348 (29%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           WG +  +P + GHE  G V  VG  V  +  GD V +    G C  C  C ++  N C  
Sbjct: 65  WGFSM-YPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCP- 122

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTST---FSEYTVTHVGCVAKINPAAPLDKV 122
                         +   +       +  GT T   +S + V +   + +     PLD  
Sbjct: 123 --------------KMILTYASI---YHDGTITYGGYSNHMVANERYIIRFPDNMPLDGG 165

Query: 123 CVLSCGISTGFGATV-------NVAKPKKGQSVAIFGLG-----AVGLAAAEGARVSGAS 170
             L C      G TV        + +P  G+ + I GLG     AV  A A G++V+  S
Sbjct: 166 APLLCA-----GITVYSPLKYFGLDEP--GKHIGIVGLGGLGHVAVKFAKAFGSKVTVIS 218

Query: 171 RIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMI 229
                  +PS+  EA K FG   F+  +D +         M            G++  +I
Sbjct: 219 T------SPSKKEEALKNFGADSFLVSRDQE--------QMQ--------AAAGTLDGII 256

Query: 230 SAFECVHDGW----------GVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYK--- 276
                VH             G  +LVG P K        + +   + + G+  G  K   
Sbjct: 257 DTVSAVHP-LLPLFGLLKSHGKLILVGAPEKPLELPAFSL-IAGRKIVAGSGIGGMKETQ 314

Query: 277 ------PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAG 318
                  + ++ + +E                +    +N A + +   
Sbjct: 315 EMIDFAAKHNITADIE---------------VISTDYLNTAMERLAKN 347

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 82.7 bits (205), Expect = 5e-18
 Identities = 74/346 (21%), Positives = 111/346 (32%), Gaps = 96/346 (27%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDL 65
           W  T  +P + GHE  G V +VG+ V    PGD V +      CK C  C     N CD 
Sbjct: 71  WAGTV-YPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDH 129

Query: 66  LRINTDRGVMINDGQSRFSIKGKPIYHFVGTST---FSEYTVTHVGCVAKI-NPAAPLDK 121
           +   T      N                    T   +S+  V H   V +I +P   L  
Sbjct: 130 M-TGT-----YNS-----------PTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAA 172

Query: 122 VCVLSCGISTGFGATV----NVAKPKKGQSVAIFGLG-----AVGLAAAEGARVSGASRI 172
           V  L C      G T        +   G+ V + G+G      + LA A GA V   +  
Sbjct: 173 VAPLLCA-----GITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTT- 226

Query: 173 IGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAF 232
                + ++   AK  G  E VN ++ D        +M             S   +++  
Sbjct: 227 -----SEAKREAAKALGADEVVNSRNAD--------EMA--------AHLKSFDFILNTV 265

Query: 233 ECVHDGW----------GVAVLVGVPNKDDAFKTHPMNLL-NERTLKGTFFGNYK----- 276
              H+            G   LVG P           NL+   R + G+  G        
Sbjct: 266 AAPHN-LDDFTTLLKRDGTMTLVGAPATPHKS-PEVFNLIMKRRAIAGSMIGGIPETQEM 323

Query: 277 ----PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAG 318
                   + + +E                +   +IN+A++ ML G
Sbjct: 324 LDFCAEHGIVADIE---------------MIRADQINEAYERMLRG 354

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 81.9 bits (203), Expect = 1e-17
 Identities = 54/329 (16%), Positives = 97/329 (29%), Gaps = 72/329 (21%)

Query: 8   GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR 67
           G  P  P + G+E    V +VG  VT L+PGD V+P   G                    
Sbjct: 79  GLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAG-------------------- 118

Query: 68  INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSC 127
                                     +GT  +    V     + ++    PL     L  
Sbjct: 119 --------------------------LGT--WRTEAVFSEEALIQVPSDIPLQSAATLGV 150

Query: 128 GISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGV----DLNPSRF 182
              T +   ++  + + G SV        VG A  + A   G  R I V           
Sbjct: 151 NPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLS 209

Query: 183 NEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGV 241
           +  K  G    +  ++  +P  ++     +      ++ C G   +       +  G G 
Sbjct: 210 DRLKSLGAEHVITEEELRRP--EMKNFFKDMPQPRLALNCVGGKSST-ELLRQLARG-GT 265

Query: 242 AVLVGVPNKDDAFKTHPMNLL--NERTLKGTFFGNYKPRSDLPSVVEKYMNKEL------ 293
            V  G   K        ++LL   +  L+G +   +  +   P   ++ +   L      
Sbjct: 266 MVTYGGMAKQPV--VASVSLLIFKDLKLRGFWLSQW-KKDHSPDQFKE-LILTLCDLIRR 321

Query: 294 -EVEKFITHTVPFSEINKAFDLMLAGESI 321
            ++       VP  +   A +  +     
Sbjct: 322 GQLTAPACSQVPLQDYQSALEASMKPFIS 350

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 80.3 bits (199), Expect = 3e-17
 Identities = 69/338 (20%), Positives = 108/338 (31%), Gaps = 77/338 (22%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGV-TDLQPGDHV-LPVFTGECKECPHCHSEESNMCD 64
           WG     P + GHE  G V  +G    + L+ G  V +      C EC  C ++    C 
Sbjct: 57  WGNMK-MPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCT 115

Query: 65  LLRINTDRGVMINDGQSRFSIKGKPIYHFV---GTST---FSEYTVTHVGCVAKINPAAP 118
                                K    Y      G  +   ++ Y   H   V  I    P
Sbjct: 116 ---------------------KFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIP 154

Query: 119 LDKVCVLSCGISTGFGATV----NVAKPKKGQSVAIFGLG-----AVGLAAAEGARVSGA 169
                 L CG     G TV           G+ V I GLG        ++ A GA     
Sbjct: 155 SHLAAPLLCG-----GLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVI 209

Query: 170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMI 229
           SR      +  +  +A K G   ++   + +    +   D  +  V        S    I
Sbjct: 210 SR------SSRKREDAMKMGADHYIATLE-EGDWGEKYFDTFDLIVV-----CASSLTDI 257

Query: 230 SA---FECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVE 286
                 + +  G G  V + +P + +     P   L   ++  +  G         S+ E
Sbjct: 258 DFNIMPKAMKVG-GRIVSISIPEQHEMLSLKPY-GLKAVSISYSALG---------SIKE 306

Query: 287 -KYMNKELEVEKFITH---TVPFSE--INKAFDLMLAG 318
              +  +L  EK I     T+P  E  +++AF+ M  G
Sbjct: 307 LNQL-LKLVSEKDIKIWVETLPVGEAGVHEAFERMEKG 343

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 78.2 bits (193), Expect = 2e-16
 Identities = 65/335 (19%), Positives = 99/335 (29%), Gaps = 76/335 (22%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
               G +  G V +VG  VT +Q GD V                                
Sbjct: 63  WAFLGTDYAGTVVAVGSDVTHIQVGDRVY------------------------------- 91

Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST-- 131
                G         P         FS+YTVT     AKI      ++   L  GIST  
Sbjct: 92  -----GAQNEMCPRTP-----DQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAG 141

Query: 132 ----------GFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVDLNPS 180
                        +        K   V ++G   A      +  R+SG   I     +P 
Sbjct: 142 LAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC--SPH 199

Query: 181 RFNEAKKFGVTEFVNPKDYDKP-VQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGW 239
            F+ AK  G  E     DY  P + Q I   T   +  +++C  +V++    F  +    
Sbjct: 200 NFDLAKSRGAEEVF---DYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG 256

Query: 240 G-VAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVE---------KYM 289
           G    L   P      K    +     T+ G     +      P   E         +  
Sbjct: 257 GHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGST-WPAPYGRPGSEEERQFGEDLWRIA 315

Query: 290 NKELEVEKFITHTVP-----FSEINKAFDLMLAGE 319
            + +E  + + H +      F  I +  +L+  GE
Sbjct: 316 GQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGE 350

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 45/343 (13%), Positives = 92/343 (26%), Gaps = 88/343 (25%)

Query: 9   QTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRI 68
            T       G+E    V  VG  V+ L+ GD V+P                         
Sbjct: 68  GTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFG------------------- 108

Query: 69  NTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCG 128
                                        T+  + + +     K+ P     K      G
Sbjct: 109 -----------------------------TWRTHALGNDDDFIKL-PNPAQSKANGKPNG 138

Query: 129 IS------------TGFGATVNVAKPKKGQSVAIF--GLGAVGLAAAEGARVSGASRIIG 174
           ++            T +    +  K   G+   I   G  AVG  A++  ++      I 
Sbjct: 139 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSIS 197

Query: 175 VDLNPSRFNE----AKKFGVTEFVNPKDYD-KPVQQVIADMTN---GGVDRSVECTGSVQ 226
           V  +    +E     K+ G T+ +     + +     I +      G    ++ C G   
Sbjct: 198 VIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS 257

Query: 227 AMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLL--NERTLKGTFFGNYKPRSDLPSV 284
           +       +++  G+ +  G  +      T P +L      T  G +       +    +
Sbjct: 258 ST-GIARKLNNN-GLMLTYGGMSFQPV--TIPTSLYIFKNFTSAGFWVTELLKNN--KEL 311

Query: 285 VEKYMNKEL-------EVEKFITHTVPFSEINKAFDLMLAGES 320
                  ++       ++    +    +       +L   G +
Sbjct: 312 KTS-TLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVA 353

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 59.1 bits (144), Expect = 4e-10
 Identities = 51/326 (15%), Positives = 90/326 (27%), Gaps = 98/326 (30%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINT 70
              P   G++  G V  +G  V ++  GD V                             
Sbjct: 65  NNLPSGLGYDFSGEVIELGSDVNNVNIGDKV----------------------------- 95

Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINP---------AAPLDK 121
                         I G P         ++EY       + +            + P   
Sbjct: 96  ------------MGIAGFP----DHPCCYAEYVCASPDTIIQK-LEKLSFLQAASLPT-- 136

Query: 122 VCVLSCGISTGFGA--TVNVAKPKKGQSVAIFG-LGAVG-----LAAAEGARVSGASRII 173
                     G  A   +N A+ K+G  V I    G VG     LA  +G  V   +   
Sbjct: 137 ---------AGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR 187

Query: 174 GVDLNPSRFNEAKKFGVTEFVNPKDYDK-PVQQVIADMTNGGVDRSVECTGSVQAMISAF 232
                       K  G  + +   +Y +      I+      VD  ++  G     I + 
Sbjct: 188 NHAF-------LKALGAEQCI---NYHEEDFLLAIST----PVDAVIDLVGG-DVGIQSI 232

Query: 233 ECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKE 292
           +C+ +  G  V V             + +  ++  +           +L  + +     +
Sbjct: 233 DCLKET-GCIVSVPTITAGR-----VIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDK 286

Query: 293 LEVEKFITHTVPFSEINKAFDLMLAG 318
           L +E  I+     SE   A +L+  G
Sbjct: 287 LRIE--ISRIFQLSEAVTAHELLETG 310

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 59.1 bits (144), Expect = 5e-10
 Identities = 37/208 (17%), Positives = 62/208 (29%), Gaps = 54/208 (25%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINT 70
              P I G+E  GIVE+VG  V+    G  VLP                           
Sbjct: 60  IPLPNIPGYEGVGIVENVGAFVSRELIGKRVLP--------------------------- 92

Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
                                   G  T+ EY  T    V  I  +        +     
Sbjct: 93  ----------------------LRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPL 130

Query: 131 TGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189
           T +         ++   + +     A+G   A+ +++    R+I V  N     E  + G
Sbjct: 131 TAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLG 189

Query: 190 VTEFVNPKDYDKPVQQVIADMTNG-GVD 216
               ++       + + + ++TNG G D
Sbjct: 190 AAYVIDTSTAP--LYETVMELTNGIGAD 215

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 56.4 bits (137), Expect = 3e-09
 Identities = 57/326 (17%), Positives = 103/326 (31%), Gaps = 81/326 (24%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINT 70
              P + G E  G+V S  EG + ++PGD    V                          
Sbjct: 76  MEPPFVPGIETAGVVRSAPEG-SGIKPGDR---VMA------------------------ 107

Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
                                 F     ++E        +    P     +   L     
Sbjct: 108 ----------------------FNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYH 145

Query: 131 TGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189
           T + A     + + G++V + G  G +G AA + A+  GA ++I V    +     K  G
Sbjct: 146 TMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVG 204

Query: 190 VTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTG------SVQAMISAFECVHDGWGVA 242
               +     ++   + + + T G GVD  V+  G      +V+ +  A E      G  
Sbjct: 205 ADIVLP---LEEGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTL--ASE------GRL 253

Query: 243 VLVGVPNKDDAFKTHPMNLLNER--TLKGTFFGNYKPRSDLPSVVEKYMNKELE-----V 295
           ++VG         T  +N L  R  +L G  +G +         + +      +     +
Sbjct: 254 LVVGFAAGGIP--TIKVNRLLLRNASLIGVAWGEFLRTH--ADYLYETQAGLEKLVAEGM 309

Query: 296 EKFITHTVPFSEINKAFDLMLAGESI 321
              ++  +P SE  +A      G+  
Sbjct: 310 RPPVSARIPLSEGRQALQDFADGKVY 335

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 41/213 (19%), Positives = 65/213 (30%), Gaps = 59/213 (27%)

Query: 9   QTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRI 68
             P  P   G EA GIV  VG GV  ++ GD V                           
Sbjct: 53  PPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRV--------------------------- 85

Query: 69  NTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDK-VCVLSC 127
                                +Y       +S          A +  A   ++       
Sbjct: 86  ---------------------VYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLK 124

Query: 128 GISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK 186
           G+ T +       + K  +        G VGL A + A+  GA ++IG      +   A 
Sbjct: 125 GL-TVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSAL 182

Query: 187 KFGVTEFVNPKDYDKP--VQQVIADMTNG-GVD 216
           K G  + +N   Y +   V+++  ++T G  V 
Sbjct: 183 KAGAWQVIN---YREEDLVERL-KEITGGKKVR 211

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 48/322 (14%), Positives = 74/322 (22%), Gaps = 98/322 (30%)

Query: 13  FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDR 72
              + G +  G++  VG  V     G     V                    L R     
Sbjct: 58  NGHVPGVDGAGVIVKVGAKVDSKMLGR---RVAY---------------HTSLKRH---- 95

Query: 73  GVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINP---------AAPLDKVC 123
           G                        +F+E+TV +   V  + P         A P     
Sbjct: 96  G------------------------SFAEFTVLNTDRVMTL-PDNLSFERAAALPC---- 126

Query: 124 VLSCGISTGFGA--TVNVAKPKKGQSVAIFGLGAVG-----LAAAEGARVSGASRIIGVD 176
                      A          K + V I G GAV      +    G  V   S  +   
Sbjct: 127 -------PLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSASLSQA 179

Query: 177 LNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVH 236
           L       A K GV            V Q              +   S Q   +    + 
Sbjct: 180 L-------AAKRGVRHLY---REPSQVTQ--------KYFAIFDAVNS-QNAAALVPSLK 220

Query: 237 DGWGVAVLVGVPNKD-DAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEV 295
               +  +        D   T  ++           FG+ +    L    E  +   +  
Sbjct: 221 ANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEA-LLTLIAQ 279

Query: 296 EKF---ITHTVPFSEINKAFDL 314
            K          F ++ +A D 
Sbjct: 280 GKMEIAAPDIFRFEQMIEALDH 301

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 52.6 bits (127), Expect = 6e-08
 Identities = 54/333 (16%), Positives = 98/333 (29%), Gaps = 77/333 (23%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINT 70
           P  P + G E  GIVE++G+ V   + G                                
Sbjct: 58  PKTPLVPGFECSGIVEALGDSVKGYEIG-------------------------------- 85

Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
           DR VM                 FV  + ++E   T V  V KI       +         
Sbjct: 86  DR-VMA----------------FVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFV 128

Query: 131 TGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189
           T +     VA  ++G SV +    G VG A A+         + G        +  K   
Sbjct: 129 TAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA------STFKHEA 182

Query: 190 VTEFV-NPKDYDKPVQQVIADMTNGGVD------------RSVECTGSVQAMIS-AFECV 235
           + + V +  D +    Q +  ++  GVD            + +     +   I      +
Sbjct: 183 IKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNM 242

Query: 236 HDGWGVAVLVGVPNKDDAFKTHPMNLLNER-TLKGTFFGNYKPRSDLPSVVEKYMNKELE 294
             G   +      +     K +P+ L  E   + G    N   +     ++   + K + 
Sbjct: 243 VTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIG 302

Query: 295 ------VEKFITHTVPFSEINKAFDLMLAGESI 321
                 ++  +       E+ +A   +    +I
Sbjct: 303 LYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNI 335

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 52.6 bits (127), Expect = 6e-08
 Identities = 41/213 (19%), Positives = 70/213 (32%), Gaps = 59/213 (27%)

Query: 9   QTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRI 68
             P  P   G E  G+VE+VG+ VT  + GD V                           
Sbjct: 53  PAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRV--------------------------- 85

Query: 69  NTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDK-VCVLSC 127
                                 Y       +SE  V     + K+  +   ++   ++  
Sbjct: 86  ---------------------AYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLK 124

Query: 128 GISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK 186
           G+ T         + K G+ +      G VG  A + A+  GA ++IG   +P +   AK
Sbjct: 125 GL-TVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAK 182

Query: 187 KFGVTEFVNPKDYDKP--VQQVIADMTNG-GVD 216
             G  E ++   Y      ++V  ++T+G    
Sbjct: 183 ALGAWETID---YSHEDVAKRV-LELTDGKKCP 211

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 52.8 bits (127), Expect = 7e-08
 Identities = 32/157 (20%), Positives = 47/157 (29%), Gaps = 51/157 (32%)

Query: 14  PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRG 73
               G E  G+V   G GVT L PGD V+ +                             
Sbjct: 265 VASLGSEGAGVVVETGPGVTGLAPGDRVMGMIPK-------------------------- 298

Query: 74  VMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGF 133
                                    F    V     V +I       +   +     T +
Sbjct: 299 ------------------------AFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAY 334

Query: 134 GATVNVAKPKKGQSVAI-FGLGAVGLAAAEGARVSGA 169
            A V++A  + G+S+ +    G VG+AA + AR  GA
Sbjct: 335 YALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA 371

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 52.4 bits (126), Expect = 8e-08
 Identities = 56/347 (16%), Positives = 96/347 (27%), Gaps = 107/347 (30%)

Query: 8   GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR 67
            +   FP   G +  G+V   G  V   +PGD V                          
Sbjct: 89  IKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVW------------------------- 123

Query: 68  INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINP---------AAP 118
                             +G          T SE+ V     V+   P         + P
Sbjct: 124 -----------AAVPPWKQG----------TLSEFVVVSGNEVSHK-PKSLTHTQAASLP 161

Query: 119 LDKVCVLSCGISTGFGATVNVAK----PKKGQSVAIFG-LGAVG-----LAAAEGARVSG 168
                     + T + A   V         G+ V I G  G VG     +  A  A V+ 
Sbjct: 162 Y-------VAL-TAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTA 213

Query: 169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKP-VQQVIADMTNGGVDRSVECTGSVQA 227
                  +L        +K G  + +   DY    V++ +  +     D  ++  G    
Sbjct: 214 VCSQDASEL-------VRKLGADDVI---DYKSGSVEEQLKSL--KPFDFILDNVGG-ST 260

Query: 228 MISAFECV-HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVE 286
              A + +        V +  P   +  +     + +     G   G+   +     V  
Sbjct: 261 ETWAPDFLKKWSGATYVTLVTPFLLNMDRLG---IADGMLQTGVTVGSKALKHFWKGVHY 317

Query: 287 KYMN-----KELE-----VEK-----FITHTVPFSEINKAFDLMLAG 318
           ++         L+     V+       I  T PFS++ +AF  +  G
Sbjct: 318 RWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERG 364

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 51.8 bits (125), Expect = 9e-08
 Identities = 46/224 (20%), Positives = 64/224 (28%), Gaps = 66/224 (29%)

Query: 2   GFDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESN 61
           G           P + G EA  +VE VG GVTD   G+ V                    
Sbjct: 50  GIPHPLVVGEP-PIVVGFEAAAVVEEVGPGVTDFTVGERV-------------------- 88

Query: 62  MCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDK 121
                                                +S+  +     + K+     LD 
Sbjct: 89  ----------------------------CTCLPPLGAYSQERLYPAEKLIKVPKDLDLDD 120

Query: 122 VCVLSCGISTGFGATV-----NVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGV 175
           V +    +    G T         K K G  V I    G +G      AR  GA  +IG 
Sbjct: 121 VHLAGLMLK---GMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGT 176

Query: 176 DLNPSRFNEAKKFGVTEFVNPKDYDKP--VQQVIADMTNG-GVD 216
                +   A+K G    +N   Y      + V  ++T G GVD
Sbjct: 177 VSTEEKAETARKLGCHHTIN---YSTQDFAEVV-REITGGKGVD 216

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 51.0 bits (123), Expect = 2e-07
 Identities = 53/314 (16%), Positives = 102/314 (32%), Gaps = 64/314 (20%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINT 70
           PL P   G +  G++E+VG+  +  + GD V                             
Sbjct: 85  PLLPYTPGSDVAGVIEAVGDNASAFKKGDRV----------------------------- 115

Query: 71  DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 130
                                    +  ++EY +     V K+       +   +     
Sbjct: 116 -------------------FTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYF 156

Query: 131 TGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG 189
           T + A ++ A  K G+SV + G  G VGLAA + AR  G  +I+G            + G
Sbjct: 157 TAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNG 215

Query: 190 VTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 248
             E  N ++ +      I       G+D  +E   +V         +  G G  ++VG  
Sbjct: 216 AHEVFNHREVN--YIDKIKKYVGEKGIDIIIEMLANVNLSKD-LSLLSHG-GRVIVVGSR 271

Query: 249 NKDDAFKTHPMNLLNER-TLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVP 304
              +     P + + +  ++ G    +      +    ++        L+    I    P
Sbjct: 272 GTIEIN---PRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPV--IGSQYP 326

Query: 305 FSEINKAFDLMLAG 318
             ++ +A + ++ G
Sbjct: 327 LEKVAEAHENIIHG 340

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 47/231 (20%), Positives = 65/231 (28%), Gaps = 84/231 (36%)

Query: 6   RWGQTPL----FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESN 61
           R G+ P      P I G +  G V +VG  V   + GD V                    
Sbjct: 52  RAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDSFRVGDAV-------------------- 91

Query: 62  MCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINP------ 115
              L       GV    G                  T +++       +A   P      
Sbjct: 92  -FGLT-----GGVGGLQG------------------THAQFAAVDARLLASK-PAALTMR 126

Query: 116 ---AAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF----GLG--AVGLAAAEGARV 166
                PL         I T +   V+ A+ + GQ+V I     G+G  A+ +A A GARV
Sbjct: 127 QASVLPL-------VFI-TAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARV 178

Query: 167 SG-ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVD 216
              A          S     +  G T         +P           G D
Sbjct: 179 FATAR--------GSDLEYVRDLGATPID---ASREPEDYAAEHTAGQGFD 218

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 54/331 (16%), Positives = 102/331 (30%), Gaps = 78/331 (23%)

Query: 11  PLFPRIFGHEAGGIVESVGEGVT-DLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN 69
              P   G E  G V ++G   +     G  V                            
Sbjct: 81  VKPPFDIGFEGIGEVVALGLSASARYTVGQAVA--------------------------- 113

Query: 70  TDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGI 129
                                  ++   +F+EYTV        + P+   + + +L  G 
Sbjct: 114 -----------------------YMAPGSFAEYTVVPASIATPV-PSVKPEYLTLLVSGT 149

Query: 130 STGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF 188
            T + +   +    +G+ V +    G  G  A + ++ +    +IG   +  +    K  
Sbjct: 150 -TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSL 207

Query: 189 GVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMI-SAFECVHDGWGVAVLVG- 246
           G    +N K     V  V+      GVD   E  G   AM   A + +    G  +++G 
Sbjct: 208 GCDRPINYKTEP--VGTVLKQEYPEGVDVVYESVG--GAMFDLAVDALATK-GRLIVIGF 262

Query: 247 -------VPNKDDAFKTHPMNLLNER-TLKGTFFGNYKPRSD--LPSVVEKYMNKELEVE 296
                           T P  LL +  +++G F  +Y  +    +  ++E  ++ +L  E
Sbjct: 263 ISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCE 322

Query: 297 ------KFITHTVPFSEINKAFDLMLAGESI 321
                            I +A + M  G++ 
Sbjct: 323 VDLGDLSPEGRFTGLESIFRAVNYMYMGKNT 353

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 6  RWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV 41
          R       PR+ G +A G+VESVG  VT    GD V
Sbjct: 52 RLMDVSKAPRVLGFDAIGVVESVGNEVTMFNQGDIV 87

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 36/324 (11%), Positives = 81/324 (25%), Gaps = 76/324 (23%)

Query: 8   GQTPLFPRIFGHEAGGIVESVGEGV-TDLQPGDHVLPVFTGECKECPHCHSEESNMCDLL 66
           GQ  +  R  G E  G + + G+        G  V                         
Sbjct: 74  GQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFA---------------------- 111

Query: 67  RINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLS 126
                   + N G                  +++EY V        +      +    + 
Sbjct: 112 ------TGLSNWG------------------SWAEYAVAEAAACIPLLDTVRDEDGAAMI 147

Query: 127 CGISTGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA 185
               T      ++ K +  ++  +      +       A+  G  R I       +    
Sbjct: 148 VNPLTAIAM-FDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALL 205

Query: 186 KKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTG------SVQAMISAFECVHDG 238
           K  G    +N K  D   +  + ++         ++            AM          
Sbjct: 206 KDIGAAHVLNEKAPD--FEATLREVMKAEQPRIFLDAVTGPLASAIFNAM--PKR----- 256

Query: 239 WGVAVLVGVPNKDDAFKTHPMNLLNER-TLKGTFFGNYKPR------SDLPSVVEKYMNK 291
               ++ G  + D      P  L+ +   ++G +   +  +        +    +++ + 
Sbjct: 257 -ARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDG 315

Query: 292 ELEVEKFITHTVPFSEINKAFDLM 315
               +  +T  VP +E        
Sbjct: 316 RWSTD--VTAVVPLAEAIAWVPAE 337

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 6  RWGQTPL-FPRIFGHEAGGIVESVGEGVTDLQPGDHV 41
          R G  P   P + G EA G V + G+GVT+ + GD V
Sbjct: 55 RKGIYPCEKPYVLGREASGTVVAKGKGVTNFEVGDQV 91

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 45.7 bits (108), Expect = 1e-05
 Identities = 29/341 (8%), Positives = 68/341 (19%), Gaps = 80/341 (23%)

Query: 2   GFDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESN 61
           G  +            G+E  G+V   G            +                   
Sbjct: 79  GAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAA----------------- 121

Query: 62  MCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDK 121
                                           +G + +S+Y          +   A    
Sbjct: 122 --------------------------------IGGAMYSQYRCIPADQCLVLPEGATPA- 148

Query: 122 VCVLSCGISTGFGA--TVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN 178
               +        A   V   + +   ++        +G    +     G  +++ +   
Sbjct: 149 --DGASSFVNPLTALGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRK 205

Query: 179 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHD 237
             + +  K  G     N         Q + +     G   + + TG  +       C+  
Sbjct: 206 QEQADLLKAQGAVHVCNAASPT--FMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEA 263

Query: 238 GWGVAVLVGVPNKDDAFKTH-------------PMNLLNERTLKG----TFFGNYKP--R 278
               +            K                 N      + G     F         
Sbjct: 264 ALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLLFPFLQKIGRERA 323

Query: 279 SDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE 319
           + L   V   +          +  +  +E+     + +  +
Sbjct: 324 NALKQRVVAELKTTFASH--YSKEISLAEVLDLDMIAVYNK 362

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 9   QTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV 41
                 ++ G++A GIV +VG  VT  +PGD V
Sbjct: 77  PDGTDWKVIGYDAAGIVSAVGPDVTLFRPGDEV 109

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	329
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.96
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.88
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.22
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.92
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.61
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.54
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.43
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.39
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.33
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.27
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.13
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.05
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.02
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.99
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.94
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.93
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.92
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.81
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.77
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.75
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.74
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.67
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.66
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.6
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.56
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.51
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.48
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.44
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.42
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.32
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.22
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.17
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.08
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.08
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.06
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	96.99
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.97
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.96
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.96
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.95
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.92
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.91
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.91
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.89
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.88
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.87
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.86
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.85
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.84
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.79
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.79
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.78
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.78
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.77
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.76
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.76
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.76
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.76
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.75
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.74
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.73
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.73
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.72
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.71
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.71
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.69
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.69
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.68
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.68
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.68
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.67
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.65
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.63
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.63
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.62
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.62
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.62
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.62
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.61
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.6
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.6
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.59
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.58
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.58
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.58
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.56
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.56
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.55
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.55
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.55
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.53
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.53
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.52
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.52
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.52
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.52
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.51
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.51
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.51
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.5
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.49
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.48
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.48
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.48
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.47
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.47
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.47
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.47
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.46
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.46
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.46
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.46
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.45
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.45
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.45
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.45
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.44
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.44
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.44
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.44
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.44
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.43
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.43
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.43
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.43
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.43
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.43
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.42
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.42
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.42
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.41
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.39
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.39
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.39
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.39
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.37
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.37
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.37
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.37
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.36
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.36
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.34
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.34
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.34
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.33
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.32
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.32
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.32
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.32
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.31
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.31
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.3
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.29
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.29
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.27
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.27
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.27
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.27
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.25
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.25
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.24
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.23
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.23
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.21
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.21
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.2
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.2
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.18
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.17
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.17
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.16
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.16
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.15
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.15
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.15
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.14
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.14
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.13
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.13
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.13
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.13
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.12
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.11
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.1
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.09
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.08
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.08
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.08
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.07
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.07
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.06
1spx_A	278	Short-chain reductase family member (5L265); paral	96.06
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.06
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.05
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.05
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.05
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.04
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.04
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.04
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.03
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.03
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.03
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.02
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.02
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.02
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.01
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.01
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.01
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.01
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.0
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.99
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	95.99
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	95.99
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.98
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.97
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	95.97
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.95
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.95
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	95.94
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	95.94
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	95.94
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.93
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.93
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.91
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	95.9
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	95.9
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	95.89
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	95.89
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	95.88
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	95.87
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.87
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.86
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	95.86
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.85
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.85
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	95.85
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	95.84
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.84
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	95.84
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.84
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	95.81
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.81
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.78
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	95.78
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.78
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	95.78
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.78
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	95.77
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.77
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.76
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.75
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	95.74
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	95.73
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.73
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	95.73
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.72
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.72
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	95.72
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.72
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.71
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.71
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.71
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.7
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.7
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.69
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	95.69
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.68
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	95.67
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.66
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.65
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.64
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	95.64
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.62
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.57
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.56
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.55
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.54
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.52
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.52
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.52
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.49
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.49
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.49
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.49
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.48
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.44
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.44
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.44
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.43
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.43
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	95.42
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.42
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.4
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.39
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.39
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.38
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.38
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.37
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.37
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.37
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.37
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.36
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.36
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.35
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.34
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.34
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	95.32
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.32
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.32
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.32
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	95.32
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.31
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	95.3
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.3
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.29
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	95.27
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.27
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.25
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.25
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.25
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.25
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.24
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.21
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.21
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.2
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.18
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.18
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.17
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.16
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	95.16
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.13
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.13
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	95.12
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.1
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.07
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.07
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.07
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	95.07
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.06
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.05
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	95.05
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.04
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.03
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.03
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.03
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.01
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.01
2o07_A	304	Spermidine synthase; structural genomics, structur	95.0
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	94.98
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	94.97
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	94.96
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	94.96
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	94.95
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	94.94
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	94.93
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	94.88
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	94.86
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	94.85
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	94.85
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	94.83
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	94.83
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	94.82
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	94.82
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	94.81
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	94.8
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	94.78
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	94.78
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	94.77
4had_A	350	Probable oxidoreductase protein; structural genomi	94.74
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	94.72
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	94.71
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	94.71
3l07_A	285	Bifunctional protein fold; structural genomics, ID	94.7
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	94.7
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	94.68
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	94.67
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	94.67
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	94.65
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	94.64
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	94.64
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	94.63
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	94.61
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	94.6
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	94.6
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	94.6
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	94.6
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	94.59
3k6r_A	278	Putative transferase PH0793; structural genomics,	94.58
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	94.57
3f4k_A	257	Putative methyltransferase; structural genomics, P	94.54
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	94.51
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	94.48
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	94.46
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	94.42
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	94.42
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	94.42
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	94.41
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	94.41
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	94.39
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	94.38
2pt6_A	321	Spermidine synthase; transferase, structural genom	94.37
3u3x_A	361	Oxidoreductase; structural genomics, PSI-biology,	94.36
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	94.35
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.34
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	94.33
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	94.32
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	94.31
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	94.3
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.29
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	94.27
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	94.24
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	94.22
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	94.22
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	94.22
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	94.21
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	94.13
3dxy_A	218	TRNA (guanine-N(7)-)-methyltransferase; rossmann f	94.1
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	94.09
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	94.08
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	94.08
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	94.06
3i9f_A	170	Putative type 11 methyltransferase; structural gen	94.05
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	94.04
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	94.04
3m6w_A	464	RRNA methylase; rRNA methyltransferase, 5-methylcy	94.02
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.01
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	94.0
3lpm_A	259	Putative methyltransferase; structural genomics, p	93.99
2ozv_A	260	Hypothetical protein ATU0636; structural genomics,	93.99
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	93.97

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=7.8e-55  Score=398.87  Aligned_cols=319  Identities=57%  Similarity=1.016  Sum_probs=283.0

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ...+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|++|+++.|.+.......|+...+|..++..+|.+
T Consensus        59 ~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~  138 (378)
T 3uko_A           59 EGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKP  138 (378)
T ss_dssp             TCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEE
T ss_pred             CCCCCccCCccceEEEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcc
Confidence            34689999999999999999999999999999999999999999999999999998776555677767777788889988


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                      .+.....|+|+||+++|++.++++|++++++++|.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+
T Consensus       139 ~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga  218 (378)
T 3uko_A          139 IYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGA  218 (378)
T ss_dssp             EBCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTC
T ss_pred             cccccCCcceEeEEEechhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence            88888889999999999999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhcc-CCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHD-GWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~-~~G~vv~~g~~  248 (329)
                      ++|++++.+++++++++++|+++++++.+.+.++.+.+++++++++|+|||++|.+..++.+++++++ + |+++.+|..
T Consensus       219 ~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~-G~iv~~G~~  297 (378)
T 3uko_A          219 SRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVA  297 (378)
T ss_dssp             SCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTT-CEEEECSCC
T ss_pred             CeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccC-CEEEEEccc
Confidence            78999999999999999999999999874333488999999888999999999998899999999998 5 999999975


Q ss_pred             CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEeeC
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD  328 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~~  328 (329)
                      .........+..+.+++++.|+..+.+...+++.++++++.++++.++++++++|+|+++++|++.+++++..|+||+++
T Consensus       298 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~Kvvi~~~  377 (378)
T 3uko_A          298 ASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVLDTS  377 (378)
T ss_dssp             CTTCCEEECTHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCSEEEEETT
T ss_pred             CCCCccccCHHHHhcCcEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCceEEEEecC
Confidence            54433444443344588999887765544467899999999999998889999999999999999999888789999987


Q ss_pred             C
Q 047713          329 G  329 (329)
Q Consensus       329 ~  329 (329)
                      +
T Consensus       378 ~  378 (378)
T 3uko_A          378 K  378 (378)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.4e-51  Score=372.10  Aligned_cols=313  Identities=49%  Similarity=0.876  Sum_probs=258.9

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|++|++|+++.|++.....+.|+. .++..++..+|.+.
T Consensus        60 ~~~P~v~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~  138 (374)
T 1cdo_A           60 DGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKV  138 (374)
T ss_dssp             TSCSEECCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTT-SCSCCCEEETTEEE
T ss_pred             CCCCcccCccceEEEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccc-cCCccccccCCccc
Confidence            46799999999999999999999999999999999999999999999999999975432222321 11222233344333


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                      ++....|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|++
T Consensus       139 ~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~  218 (374)
T 1cdo_A          139 LQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAK  218 (374)
T ss_dssp             EEGGGTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCS
T ss_pred             ccccCCccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            44444689999999999999999999999999999999999999888889999999999999999999999999999997


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCC-eEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGW-GVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~-G~vv~~g~~~  249 (329)
                      +|++++++++++++++++|++.++++.+.+.++.+.+++++++++|+|||++|.++.++.+++++++ + |+++.+|...
T Consensus       219 ~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~  297 (374)
T 1cdo_A          219 RIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK-GWGVSVLVGWTD  297 (374)
T ss_dssp             EEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCS
T ss_pred             EEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCCC
Confidence            8999999999999999999999998764222388888888777999999999988889999999998 5 9999998754


Q ss_pred             CCCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713          250 KDDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM  327 (329)
Q Consensus       250 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~  327 (329)
                      . ....+.. .++.++ ++.|+..+.+...++++++++++.++++.+.++++++|+|+++++|++.+++++..|+||++
T Consensus       298 ~-~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  374 (374)
T 1cdo_A          298 L-HDVATRPIQLIAGR-TWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  374 (374)
T ss_dssp             S-SCEEECHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             C-CCcccCHHHHhcCC-eEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCeeEEEEeC
Confidence            3 1222222 234566 88887655433335689999999999998888889999999999999999988878999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=3.7e-50  Score=367.34  Aligned_cols=312  Identities=44%  Similarity=0.849  Sum_probs=256.5

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|++|++|+++.|.+.....+.|+. .++..++..+|.+.
T Consensus        60 ~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~  138 (373)
T 1p0f_A           60 SKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPI  138 (373)
T ss_dssp             CCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSC-TTSCCSEEETTEEE
T ss_pred             CCCCcccCcCceEEEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccc-cCCccccccCCccc
Confidence            46799999999999999999999999999999999999999999999999999975432111221 11112222233333


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                      ++....|+|+||+++|++.++++|++++++ +|++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|++
T Consensus       139 ~~~~~~G~~aey~~v~~~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~  217 (373)
T 1p0f_A          139 YNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGAS  217 (373)
T ss_dssp             BCSTTTCCSBSEEEEETTSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCS
T ss_pred             ccccCCccceeEEEEchhhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            333345899999999999999999999999 9999999999999988889999999999999999999999999999987


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCC-eEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGW-GVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~-G~vv~~g~~~  249 (329)
                      +|++++++++++++++++|+++++++.+.+.++.+.+++++++++|+|||++|.++.++.+++++++ + |+++.+|...
T Consensus       218 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~  296 (373)
T 1p0f_A          218 RIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC-GSGVTVVLGLAS  296 (373)
T ss_dssp             EEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECCCCC
T ss_pred             eEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhc-CCCEEEEEccCC
Confidence            8999999999999999999999998764222388888888877999999999988889999999998 5 9999998754


Q ss_pred             CCCccccccc-cccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713          250 KDDAFKTHPM-NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM  327 (329)
Q Consensus       250 ~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~  327 (329)
                      ......+... ++.++ ++.|+..+.+.. ++++++++++.++++.+.++++++|+|+++++|++.+++++..|+||++
T Consensus       297 ~~~~~~~~~~~~~~~~-~i~g~~~~~~~~-~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 1p0f_A          297 PNERLPLDPLLLLTGR-SLKGSVFGGFKG-EEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIMIY  373 (373)
T ss_dssp             TTCCEEECTHHHHTTC-EEEECSGGGCCG-GGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSCSEEEEEC
T ss_pred             CCCccccCHHHhccCc-eEEeeccCCcCH-HHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCcceEEEeC
Confidence            3222222222 23456 888876554322 5799999999999998888889999999999999999888778999864

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=3.8e-50  Score=367.61  Aligned_cols=313  Identities=45%  Similarity=0.882  Sum_probs=255.1

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCcccc----ccCCCCccccCCccccccC
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR----INTDRGVMINDGQSRFSIK   86 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~----~~~~~g~~~~~~~~~~~~~   86 (329)
                      ..+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|++|++|+++.|.+..    ...+.|+.. ++..++..+
T Consensus        59 ~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~-~g~~~~~~~  137 (376)
T 1e3i_A           59 ALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELME-DRTSRFTCK  137 (376)
T ss_dssp             CCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCT-TSCCSEEET
T ss_pred             CCCCcccCccccEEEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccc-cCccccccC
Confidence            468999999999999999999999999999999999999999999999999998753    100012210 111122222


Q ss_pred             CCceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHH
Q 047713           87 GKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARV  166 (329)
Q Consensus        87 ~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~  166 (329)
                      |.+..+....|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.
T Consensus       138 g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~  217 (376)
T 1e3i_A          138 GRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKI  217 (376)
T ss_dssp             TEEEBCCTTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred             CcccccccCCccceeEEEeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence            22222223358999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             cCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          167 SGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       167 ~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|+++|++++++++++++++++|+++++++.+.+.++.+.+++++++++|+|||++|.++.++.+++++++++|+++.+|
T Consensus       218 ~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G  297 (376)
T 1e3i_A          218 AGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG  297 (376)
T ss_dssp             TTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECC
T ss_pred             cCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEEC
Confidence            99978999999999999999999999998764222388888888877999999999988889999999998339999998


Q ss_pred             cCCCCCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEE
Q 047713          247 VPNKDDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII  325 (329)
Q Consensus       247 ~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv  325 (329)
                      ....  ...+.+ .++.++ ++.|+..+.+...++++++++++.++++.+.++++++|+|+++++|++.+++++..|+||
T Consensus       298 ~~~~--~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi  374 (376)
T 1e3i_A          298 AKVD--EMTIPTVDVILGR-SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTIL  374 (376)
T ss_dssp             CSSS--EEEEEHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCCSEEEE
T ss_pred             CCCC--ccccCHHHhhccC-eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCcceEEE
Confidence            7322  122222 234566 888876554323357889999999999988888899999999999999999888789998


Q ss_pred             ee
Q 047713          326 RM  327 (329)
Q Consensus       326 ~~  327 (329)
                      .+
T Consensus       375 ~~  376 (376)
T 1e3i_A          375 TF  376 (376)
T ss_dssp             EC
T ss_pred             eC
Confidence            74

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=6.3e-50  Score=365.91  Aligned_cols=312  Identities=49%  Similarity=0.925  Sum_probs=255.8

Q ss_pred             CCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceee
Q 047713           13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYH   92 (329)
Q Consensus        13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~   92 (329)
                      +|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|++|+++.|++.......|+. .++..++..+|.+.++
T Consensus        61 ~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~  139 (374)
T 2jhf_A           61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHH  139 (374)
T ss_dssp             SSBCCCCSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBC
T ss_pred             CCcccCcCceEEEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccc-cCCccccccccccccc
Confidence            799999999999999999999999999999999999999999999999999975432111221 1111111122222222


Q ss_pred             ccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEE
Q 047713           93 FVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRI  172 (329)
Q Consensus        93 ~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~v  172 (329)
                      ....|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|
T Consensus       140 ~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~V  219 (374)
T 2jhf_A          140 FLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARI  219 (374)
T ss_dssp             STTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred             ccCCccCeeEEEEchHHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeE
Confidence            33458999999999999999999999999999999999999998888999999999999999999999999999998789


Q ss_pred             EEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCC-eEEEEeccCCCC
Q 047713          173 IGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGW-GVAVLVGVPNKD  251 (329)
Q Consensus       173 v~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~-G~vv~~g~~~~~  251 (329)
                      ++++++++++++++++|+++++++.+.+.++.+.+++++++++|+|||++|.++.++.+++++++ + |+++.+|.....
T Consensus       220 i~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~  298 (374)
T 2jhf_A          220 IGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPDS  298 (374)
T ss_dssp             EEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCTT
T ss_pred             EEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCCC
Confidence            99999999999999999999998764222388888888777999999999988889999999998 5 899999875432


Q ss_pred             Ccccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713          252 DAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM  327 (329)
Q Consensus       252 ~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~  327 (329)
                      ....+.. .++.++ ++.|+..+.+...++++++++++.++++.+.++++++|+|+++++|++.+++++..|+||++
T Consensus       299 ~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~  374 (374)
T 2jhf_A          299 QNLSMNPMLLLSGR-TWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF  374 (374)
T ss_dssp             CCEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CccccCHHHHhcCC-eEEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCcceEEEeC
Confidence            2222222 234566 88887665433235788999999999998888889999999999999999988878999874

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=3.4e-50  Score=367.63  Aligned_cols=315  Identities=52%  Similarity=0.958  Sum_probs=256.8

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|++|+.|+++.|++.....+.|+. .++..++..+|.+.
T Consensus        58 ~~~P~v~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~  136 (373)
T 2fzw_A           58 GCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTI  136 (373)
T ss_dssp             CCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEE
T ss_pred             CCCCccccccccEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccc-cCCccccccccccc
Confidence            36799999999999999999999999999999999999999999999999999875321111111 11111222233222


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                      ++....|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|++
T Consensus       137 ~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~  216 (373)
T 2fzw_A          137 LHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGAS  216 (373)
T ss_dssp             BCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCS
T ss_pred             ccccCCccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            33334589999999999999999999999999999999999999988889999999999999999999999999999987


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|++++++++++++++++|++.++++.+.+.++.+.+++++++++|+|||++|..+.++.+++++++++|+++.+|....
T Consensus       217 ~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~  296 (373)
T 2fzw_A          217 RIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS  296 (373)
T ss_dssp             EEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT
T ss_pred             eEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCC
Confidence            89999999999999999999999987642223888888888779999999999888899999999982299999987543


Q ss_pred             CCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713          251 DDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM  327 (329)
Q Consensus       251 ~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~  327 (329)
                      .....+.+ .++.++ ++.|+..+.+...++++++++++.++++.+.++++++|+|+++++|++.+++++..|+||++
T Consensus       297 ~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 2fzw_A          297 GEEIATRPFQLVTGR-TWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  373 (373)
T ss_dssp             TCCEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CceeeeCHHHHhcCC-EEEEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCcceEEEeC
Confidence            22222222 234566 88887655432235688999999999998888889999999999999999988878999874

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.3e-50  Score=365.55  Aligned_cols=312  Identities=31%  Similarity=0.525  Sum_probs=254.8

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccc-cCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFS-IKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~   89 (329)
                      ..+|.++|||++|+|+++|++|+.|++||||++.+ .+|+.|++|++|+++.|++.......|.. .+|..++. .+|.+
T Consensus        57 ~~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~~g~~  134 (371)
T 1f8f_A           57 VPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGV  134 (371)
T ss_dssp             CCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------
T ss_pred             CCCCcccCcccceEEEEeCCCCCCCCCCCEEEecC-CCCCCChhhhCcCcccccccccccccccc-ccccccccccCCcc
Confidence            36799999999999999999999999999999999 99999999999999999976421110100 00110110 01110


Q ss_pred             e-eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           90 I-YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~-~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                      . ......|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|
T Consensus       135 ~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G  214 (371)
T 1f8f_A          135 VNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCG  214 (371)
T ss_dssp             CBCCGGGTCCSBSEEEEEGGGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHT
T ss_pred             ccccccCCccccCeEEechhheEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence            0 011235899999999999999999999999999999999999999878899999999999999999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +++|++++++++++++++++|++.++++.+.+  +.+.+++++++++|+|||++|.++.++.++++++++ |+++.+|..
T Consensus       215 a~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~  291 (371)
T 1f8f_A          215 ASIIIAVDIVESRLELAKQLGATHVINSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAP  291 (371)
T ss_dssp             CSEEEEEESCHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCC
T ss_pred             CCeEEEECCCHHHHHHHHHcCCCEEecCCccC--HHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCC
Confidence            97799999999999999999999999887665  888888887779999999999888899999999998 999999875


Q ss_pred             CCCCcccccc-ccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713          249 NKDDAFKTHP-MNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM  327 (329)
Q Consensus       249 ~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~  327 (329)
                      .......+.. .++.+++++.|+..+.+...++++++++++.++++.+.+++++ |+|+++++|++.+++++..|+||++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~~Kvvv~~  370 (371)
T 1f8f_A          292 QLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGITLKPIIKI  370 (371)
T ss_dssp             STTCCCCCCHHHHHHTTCEEEECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCCccccCHHHHHhCCCEEEEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCceEEEEee
Confidence            4322222222 2356889999887654322356889999999999988778888 9999999999999888778999986


Q ss_pred             C
Q 047713          328 D  328 (329)
Q Consensus       328 ~  328 (329)
                      +
T Consensus       371 ~  371 (371)
T 1f8f_A          371 A  371 (371)
T ss_dssp             C
T ss_pred             C
Confidence            4

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=1.6e-49  Score=362.29  Aligned_cols=288  Identities=24%  Similarity=0.378  Sum_probs=251.6

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ...+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|.+|+.|+++.|.+....                    
T Consensus        72 ~~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--------------------  131 (370)
T 4ej6_A           72 PSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAI--------------------  131 (370)
T ss_dssp             CCCSSEECCCSEEEEEEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEB--------------------
T ss_pred             CCCCCeecCcceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCcccc--------------------
Confidence            346899999999999999999999999999999999999999999999999999975542                    


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                        +...+|+|+||+++|++.++++|+++++++|| ++.+++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+
T Consensus       132 --g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga  207 (370)
T 4ej6_A          132 --GIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGA  207 (370)
T ss_dssp             --TTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred             --CCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence              12346899999999999999999999999987 778999999986 88899999999999999999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHh---hhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAD---MTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~---~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ++|+++++++++.++++++|++.++++.+.+  +.+.+++   ++++++|+|||++|.+..++.++++++++ |+++.+|
T Consensus       208 ~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~G  284 (370)
T 4ej6_A          208 TTVILSTRQATKRRLAEEVGATATVDPSAGD--VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILG  284 (370)
T ss_dssp             SEEEEECSCHHHHHHHHHHTCSEEECTTSSC--HHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECS
T ss_pred             CEEEEECCCHHHHHHHHHcCCCEEECCCCcC--HHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEe
Confidence            8899999999999999999999999987766  8888888   77679999999999888999999999998 9999998


Q ss_pred             cCCCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc--eEE
Q 047713          247 VPNKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES--IRC  323 (329)
Q Consensus       247 ~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~--~kv  323 (329)
                      ........... ..++.+++++.|+....    .+++++++++.+|++.+.++++++|+|+++++|++.+.+++.  .|+
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kv  360 (370)
T 4ej6_A          285 VLPQGEKVEIEPFDILFRELRVLGSFINP----FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLV  360 (370)
T ss_dssp             CCCTTCCCCCCHHHHHHTTCEEEECCSCT----TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEE
T ss_pred             ccCCCCccccCHHHHHhCCcEEEEeccCh----HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEE
Confidence            76543222332 23457899999976533    569999999999999989999999999999999999987763  477


Q ss_pred             EEeeC
Q 047713          324 IIRMD  328 (329)
Q Consensus       324 vv~~~  328 (329)
                      +++++
T Consensus       361 v~~~~  365 (370)
T 4ej6_A          361 IPSAE  365 (370)
T ss_dssp             CCC--
T ss_pred             EEccc
Confidence            77764

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=6.6e-49  Score=355.77  Aligned_cols=288  Identities=26%  Similarity=0.382  Sum_probs=236.2

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|++|+++.|++....   |                 
T Consensus        59 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g-----------------  118 (348)
T 2d8a_A           59 IKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIF---G-----------------  118 (348)
T ss_dssp             CCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCCC------------CEET---T-----------------
T ss_pred             CCCCCccCccceEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCee---c-----------------
Confidence            36799999999999999999999999999999999999999999999999999875431   1                 


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                        ...+|+|+||+++|++.++++|+++++++||.+. +++|||+++ ..+++ +|++|||+|+|++|++++|+|+..|++
T Consensus       119 --~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~  193 (348)
T 2d8a_A          119 --VDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAY  193 (348)
T ss_dssp             --TSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred             --CCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence              1235899999999999999999999999988774 788999987 77888 999999999999999999999999986


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +|+++++++++.++++++|++.++++.+.+  +.+.+++++++ ++|+|||++|.+..++.++++++++ |+++.+|...
T Consensus       194 ~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~--~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~  270 (348)
T 2d8a_A          194 PVIVSEPSDFRRELAKKVGADYVINPFEED--VVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYP  270 (348)
T ss_dssp             SEEEECSCHHHHHHHHHHTCSEEECTTTSC--HHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCS
T ss_pred             EEEEECCCHHHHHHHHHhCCCEEECCCCcC--HHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCC
Confidence            799999999999999999999999887665  88889988887 8999999999888899999999998 9999998755


Q ss_pred             CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeee-cccHHHHHHHHHcCcceEEEEeeC
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVP-FSEINKAFDLMLAGESIRCIIRMD  328 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~-l~~i~~a~~~~~~~~~~kvvv~~~  328 (329)
                      ....++....++.+++++.|+.....  .++++++++++.+++++++++++++|+ |+++++|++.++++...|+||+++
T Consensus       271 ~~~~~~~~~~~~~~~~~i~g~~~~~~--~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~gKvvi~~~  348 (348)
T 2d8a_A          271 GKVTIDFNNLIIFKALTIYGITGRHL--WETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRAGKTGKVVFMLK  348 (348)
T ss_dssp             SCCCCCHHHHTTTTTCEEEECCCCCS--HHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHTTCCSEEEEEC-
T ss_pred             CCcccCchHHHHhCCcEEEEecCCCc--HHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhCCCceEEEEeeC
Confidence            43222210234578899988764321  256899999999999888888999999 999999999998755569999864

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=1.1e-48  Score=355.23  Aligned_cols=288  Identities=21%  Similarity=0.360  Sum_probs=246.3

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|++|+++.|++....   |+                 
T Consensus        62 ~~p~v~G~E~~G~V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~-----------------  121 (356)
T 1pl8_A           62 KKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC---AT-----------------  121 (356)
T ss_dssp             SSCEECCCEEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEET---TB-----------------
T ss_pred             CCCcccccceEEEEEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCcccc---Cc-----------------
Confidence            5799999999999999999999999999999999999999999999999999875431   11                 


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                       ...+|+|+||+++|++.++++|+++++++||.+ .+++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++
T Consensus       122 -~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~  198 (356)
T 1pl8_A          122 -PPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQ  198 (356)
T ss_dssp             -TTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSE
T ss_pred             -CCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence             012479999999999999999999999998754 6788999986 7889999999999999999999999999999978


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCC-chHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYD-KPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      |++++++++++++++++|+++++++.+.+ .++.+.+++.+++++|+|||++|.+..++.++++++++ |+++.+|....
T Consensus       199 Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~  277 (356)
T 1pl8_A          199 VVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSE  277 (356)
T ss_dssp             EEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCS
T ss_pred             EEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecCCC
Confidence            99999999999999999999998876211 24677777777668999999999887899999999998 99999987443


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEeeC
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD  328 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~~  328 (329)
                      ...++. ..++.+++++.|+...    .++++++++++.++++.++++++++|+|+++++|++.++++...|+||+++
T Consensus       278 ~~~~~~-~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~~  350 (356)
T 1pl8_A          278 MTTVPL-LHAAIREVDIKGVFRY----CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCD  350 (356)
T ss_dssp             CCCCCH-HHHHHTTCEEEECCSC----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEECC
T ss_pred             CCccCH-HHHHhcceEEEEeccc----HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCCCceEEEEeCC
Confidence            222221 2345688899887542    367999999999999888888999999999999999998884469999875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=6.4e-49  Score=356.39  Aligned_cols=293  Identities=25%  Similarity=0.367  Sum_probs=251.4

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.|+++.|........    +              
T Consensus        51 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~----~--------------  112 (352)
T 3fpc_A           51 ERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWK----F--------------  112 (352)
T ss_dssp             CCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBC----B--------------
T ss_pred             CCCCcccCCcceEEEEEECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccc----c--------------
Confidence            3679999999999999999999999999999999999999999999999998876432111    0              


Q ss_pred             eeccccccccccEEeeec--cEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           91 YHFVGTSTFSEYTVTHVG--CVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                       +...+|+|+||+++|+.  .++++|+++++++||.++++++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|
T Consensus       113 -~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G  190 (352)
T 3fpc_A          113 -SNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLG  190 (352)
T ss_dssp             -TTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTT
T ss_pred             -ccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence             11235899999999976  8999999999999999999999999986 7889999999999999999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +++|++++++++++++++++|+++++++.+.+  +.+.+++++++ ++|+|||++|.+..++.++++|+++ |+++.+|.
T Consensus       191 a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~  267 (352)
T 3fpc_A          191 AGRIFAVGSRKHCCDIALEYGATDIINYKNGD--IVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNY  267 (352)
T ss_dssp             CSSEEEECCCHHHHHHHHHHTCCEEECGGGSC--HHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCC
T ss_pred             CcEEEEECCCHHHHHHHHHhCCceEEcCCCcC--HHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEecc
Confidence            97799999999999999999999999987766  89999999988 9999999999878899999999998 99999997


Q ss_pred             CCCCCccccccc---cccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeee-cccHHHHHHHHHcCc-c-e
Q 047713          248 PNKDDAFKTHPM---NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVP-FSEINKAFDLMLAGE-S-I  321 (329)
Q Consensus       248 ~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~-l~~i~~a~~~~~~~~-~-~  321 (329)
                      ......++....   ...++.++.++....  ..++++++++++.++++.+.++++++|+ |+++++|++.+++++ . .
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~  345 (352)
T 3fpc_A          268 LGEGDNIDIPRSEWGVGMGHKHIHGGLCPG--GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLI  345 (352)
T ss_dssp             CCSCSEEEEETTTTGGGTBCEEEEEBCCCC--HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCS
T ss_pred             cCCCCceecchhHhhhhccccEEEEeeccC--chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcE
Confidence            654433332222   124677888765421  1246899999999999998888999999 999999999998865 3 5


Q ss_pred             EEEEeeC
Q 047713          322 RCIIRMD  328 (329)
Q Consensus       322 kvvv~~~  328 (329)
                      |+||+++
T Consensus       346 Kvvi~~~  352 (352)
T 3fpc_A          346 KPVVILA  352 (352)
T ss_dssp             EEEEECC
T ss_pred             EEEEEeC
Confidence            9999874

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=6.1e-49  Score=358.04  Aligned_cols=288  Identities=22%  Similarity=0.297  Sum_probs=246.9

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .++|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|+.|+++.|.+....   |.                
T Consensus        70 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~---g~----------------  130 (363)
T 3m6i_A           70 VECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFL---ST----------------  130 (363)
T ss_dssp             CCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEET---TS----------------
T ss_pred             CCCCcccCcceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCcccc---CC----------------
Confidence            46799999999999999999999999999999999999999999999999999986532   10                


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                        ...+|+|+||+++|++.++++|+ +++++||.+ .+++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|++
T Consensus       131 --~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~  205 (363)
T 3m6i_A          131 --PPVPGLLRRYVNHPAVWCHKIGN-MSYENGAML-EPLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGAC  205 (363)
T ss_dssp             --TTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHH-HHHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred             --CCCCccceeEEEEehhhEEECCC-CCHHHHHhh-hHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence              11358999999999999999999 999999877 5788999986 888999999999999999999999999999996


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCC---CCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPK---DYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|++++++++++++++++ ++.++++.   ..+.++.+.+++++++ ++|+|||++|.+..++.++++++++ |+++.+|
T Consensus       206 ~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G  283 (363)
T 3m6i_A          206 PLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIG  283 (363)
T ss_dssp             SEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECC
T ss_pred             EEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEc
Confidence            699999999999999999 76655432   1123588889999877 9999999999987899999999998 9999998


Q ss_pred             cCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc-c-eEEE
Q 047713          247 VPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE-S-IRCI  324 (329)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~-~-~kvv  324 (329)
                      .......++. ..++.+++++.++...    .++++++++++.++++.+.++++++|+|+++++||+.+.+++ . .|+|
T Consensus       284 ~~~~~~~~~~-~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvv  358 (363)
T 3m6i_A          284 VGKNEIQIPF-MRASVREVDLQFQYRY----CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQ  358 (363)
T ss_dssp             CCCSCCCCCH-HHHHHHTCEEEECCSC----SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEE
T ss_pred             cCCCCccccH-HHHHhcCcEEEEccCC----HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEE
Confidence            7554433222 2345688899887643    378999999999999988889999999999999999999873 3 5999


Q ss_pred             EeeCC
Q 047713          325 IRMDG  329 (329)
Q Consensus       325 v~~~~  329 (329)
                      |++++
T Consensus       359 i~~~~  363 (363)
T 3m6i_A          359 IQSLE  363 (363)
T ss_dssp             EECC-
T ss_pred             EecCC
Confidence            99875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=6.2e-49  Score=355.28  Aligned_cols=289  Identities=27%  Similarity=0.396  Sum_probs=248.0

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|++|+.|+++.|++....   |                 
T Consensus        55 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g-----------------  114 (343)
T 2dq4_A           55 IRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQIL---G-----------------  114 (343)
T ss_dssp             CCSSEECCCEEEEEEEEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEB---T-----------------
T ss_pred             CCCCCcCCccceEEEEEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCccee---c-----------------
Confidence            46799999999999999999999999999999999999999999999999999975431   1                 


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                        ...+|+|+||+++|++.++++|+++++++||.+ .++.|||+++.+.+++ +|++|||+|+|++|++++|+|+.+|++
T Consensus       115 --~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~  190 (343)
T 2dq4_A          115 --VDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAG  190 (343)
T ss_dssp             --TTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred             --CCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence              123589999999999999999999999998876 5778999987657889 999999999999999999999999986


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|+++++++++.++++++ ++.++++.+.+  +.+.+++++++++|+|||++|....++.++++++++ |+++.+|....
T Consensus       191 ~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~--~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~  266 (343)
T 2dq4_A          191 PILVSDPNPYRLAFARPY-ADRLVNPLEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSD  266 (343)
T ss_dssp             SEEEECSCHHHHGGGTTT-CSEEECTTTSC--HHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSS
T ss_pred             EEEEECCCHHHHHHHHHh-HHhccCcCccC--HHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC
Confidence            799999999999999999 99999887655  888888888339999999999878899999999998 99999987543


Q ss_pred             CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEeeCC
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMDG  329 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~~~  329 (329)
                      ...++....++.+++++.|+....  ..++++++++++.++++.++++++++|+|+++++|++.+++++..|+||+++.
T Consensus       267 ~~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvv~~~~a  343 (343)
T 2dq4_A          267 PIRFDLAGELVMRGITAFGIAGRR--LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVILDPKA  343 (343)
T ss_dssp             CEEECHHHHTGGGTCEEEECCSCC--TTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSCSEEEEETTC
T ss_pred             CceeCcHHHHHhCceEEEEeecCC--CHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCceEEEEeeCC
Confidence            322221023467889999876431  23578999999999998888889999999999999999988777899998763

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.8e-48  Score=350.63  Aligned_cols=286  Identities=23%  Similarity=0.363  Sum_probs=245.3

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|++|++|+++.|++....   |.                
T Consensus        58 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~----------------  118 (352)
T 1e3j_A           58 VKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC---AT----------------  118 (352)
T ss_dssp             CCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEET---TB----------------
T ss_pred             CCCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCccc---Cc----------------
Confidence            35799999999999999999999999999999999999999999999999999875431   11                


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                        ...+|+|+||+++|++.++++|+++++++||.+ .+++|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+ 
T Consensus       119 --~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-  193 (352)
T 1e3j_A          119 --PPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-  193 (352)
T ss_dssp             --TTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-
T ss_pred             --CCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence              012479999999999999999999999998754 6788999986 78899999999999999999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCC-CCchHHHHHHhhhc---C-CccEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKD-YDKPVQQVIADMTN---G-GVDRSVECTGSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~---~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      +|++++++++++++++++|++.++++.+ .+  +.+.+++.++   + ++|+|||++|....++.++++++++ |+++.+
T Consensus       194 ~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~--~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~  270 (352)
T 1e3j_A          194 FVVCTARSPRRLEVAKNCGADVTLVVDPAKE--EESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLV  270 (352)
T ss_dssp             EEEEEESCHHHHHHHHHTTCSEEEECCTTTS--CHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHhCCCEEEcCccccc--HHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEE
Confidence            6999999999999999999999988764 43  6677777775   4 8999999999877899999999998 999999


Q ss_pred             ccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc--ceEE
Q 047713          246 GVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE--SIRC  323 (329)
Q Consensus       246 g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~--~~kv  323 (329)
                      |.......++. ..++.+++++.|+...    .++++++++++.++++.++++++++|+|+++++|++.+.+++  ..|+
T Consensus       271 G~~~~~~~~~~-~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kv  345 (352)
T 1e3j_A          271 GMGSQMVTVPL-VNACAREIDIKSVFRY----CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKV  345 (352)
T ss_dssp             SCCSSCCCCCH-HHHHTTTCEEEECCSC----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEE
T ss_pred             ecCCCCccccH-HHHHhcCcEEEEeccc----hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEE
Confidence            87443222222 2345688899887542    367999999999999888888899999999999999998886  4599


Q ss_pred             EEeeC
Q 047713          324 IIRMD  328 (329)
Q Consensus       324 vv~~~  328 (329)
                      ||+++
T Consensus       346 vi~~~  350 (352)
T 1e3j_A          346 MISCR  350 (352)
T ss_dssp             EEECC
T ss_pred             EEecC
Confidence            99875

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=1.6e-48  Score=352.32  Aligned_cols=284  Identities=26%  Similarity=0.425  Sum_probs=246.7

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEe-ecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVL-PVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      +.+|.++|||++|+|+++|++|++|++||||+ ..+..+|+.|++|+.|+++.|.+....                    
T Consensus        55 ~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~--------------------  114 (340)
T 3s2e_A           55 PTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT--------------------  114 (340)
T ss_dssp             CCSSBCCCSEEEEEEEEECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB--------------------
T ss_pred             CCCCcccCCcceEEEEEECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCcccccc--------------------
Confidence            56899999999999999999999999999995 566789999999999999999975442                    


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                        +...+|+|+||+++|++.++++|++++++++|++++++.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+
T Consensus       115 --g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga  191 (340)
T 3s2e_A          115 --GYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL  191 (340)
T ss_dssp             --TTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC
T ss_pred             --CCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC
Confidence              123458999999999999999999999999999999999999986 67799999999999999999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                       +|+++++++++.++++++|++.++++.+.+  +.+.+++ +.+++|+|||++|.+..++.++++++++ |+++.+|...
T Consensus       192 -~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~--~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~  266 (340)
T 3s2e_A          192 -RVAAVDIDDAKLNLARRLGAEVAVNARDTD--PAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPP  266 (340)
T ss_dssp             -EEEEEESCHHHHHHHHHTTCSEEEETTTSC--HHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCS
T ss_pred             -eEEEEeCCHHHHHHHHHcCCCEEEeCCCcC--HHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccC-CEEEEeCCCC
Confidence             899999999999999999999999987766  8888887 4458999999999889999999999998 9999998755


Q ss_pred             CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEeeC
Q 047713          250 KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRMD  328 (329)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~~  328 (329)
                      .....+ ....+.+++++.|+.....   ++++++++++.++++.+  . .+.|+|+++++|++.+++++. +|+||+++
T Consensus       267 ~~~~~~-~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~  339 (340)
T 3s2e_A          267 GDFGTP-IFDVVLKGITIRGSIVGTR---SDLQESLDFAAHGDVKA--T-VSTAKLDDVNDVFGRLREGKVEGRVVLDFS  339 (340)
T ss_dssp             SEEEEE-HHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSCCC--C-EEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             CCCCCC-HHHHHhCCeEEEEEecCCH---HHHHHHHHHHHhCCCCc--e-EEEEeHHHHHHHHHHHHcCCCceEEEEecC
Confidence            332222 1233568899998776543   67999999999998764  2 467899999999999998886 59999987


Q ss_pred             C
Q 047713          329 G  329 (329)
Q Consensus       329 ~  329 (329)
                      +
T Consensus       340 ~  340 (340)
T 3s2e_A          340 R  340 (340)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=4.3e-48  Score=350.13  Aligned_cols=287  Identities=22%  Similarity=0.290  Sum_probs=246.0

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|++|+++.|.........                 .
T Consensus        54 ~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~-----------------~  116 (345)
T 3jv7_A           54 YGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGIT-----------------P  116 (345)
T ss_dssp             SCSSEECCSEEEEEEEEECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCC-----------------C
T ss_pred             CCCCcccCcccEEEEEEECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccc-----------------c
Confidence            46899999999999999999999999999999999999999999999999999432211000                 0


Q ss_pred             eeccccccccccEEee-eccEEEcCCCCCccchhcccccccchhhhhhh-ccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           91 YHFVGTSTFSEYTVTH-VGCVAKINPAAPLDKVCVLSCGISTGFGATVN-VAKPKKGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~-~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                      .+...+|+|+||+++| ++.++++|+ ++++++|++++++.|||+++.. ...+++|++|||+|+|++|++++|+|+.+|
T Consensus       117 ~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g  195 (345)
T 3jv7_A          117 PGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVS  195 (345)
T ss_dssp             BTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHC
T ss_pred             CCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence            1122358999999999 999999999 9999999999999999999766 458999999999999999999999999985


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ..+|++++++++++++++++|++.++++.+ +  +.+.+++++++ ++|+|||++|.+..++.++++++++ |+++.+|.
T Consensus       196 ~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~--~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~  271 (345)
T 3jv7_A          196 AARVIAVDLDDDRLALAREVGADAAVKSGA-G--AADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGI  271 (345)
T ss_dssp             CCEEEEEESCHHHHHHHHHTTCSEEEECST-T--HHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSC
T ss_pred             CCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-c--HHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC-CEEEEECC
Confidence            449999999999999999999999998765 3  88899999988 9999999999988999999999998 99999997


Q ss_pred             CCC-CCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEE
Q 047713          248 PNK-DDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCII  325 (329)
Q Consensus       248 ~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv  325 (329)
                      ... ...++  ...+.+++++.++.....   ++++++++++.++++.+   ++++|+|+++++|++.+.+++. +|+||
T Consensus       272 ~~~~~~~~~--~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~---~~~~~~l~~~~~A~~~~~~~~~~Gkvvv  343 (345)
T 3jv7_A          272 HAGAHAKVG--FFMIPFGASVVTPYWGTR---SELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLREGSIRGRGVV  343 (345)
T ss_dssp             CTTCCEEES--TTTSCTTCEEECCCSCCH---HHHHHHHHHHHTTCCCC---CEEEECSTTHHHHHHHHHHTCCSSEEEE
T ss_pred             CCCCCCCcC--HHHHhCCCEEEEEecCCH---HHHHHHHHHHHcCCCce---EEEEEcHHHHHHHHHHHHcCCCceeEEe
Confidence            655 22222  345678999988776543   67999999999998865   4589999999999999998886 59888


Q ss_pred             ee
Q 047713          326 RM  327 (329)
Q Consensus       326 ~~  327 (329)
                      .+
T Consensus       344 ~p  345 (345)
T 3jv7_A          344 VP  345 (345)
T ss_dssp             CC
T ss_pred             CC
Confidence            63

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=6.5e-48  Score=349.20  Aligned_cols=290  Identities=23%  Similarity=0.357  Sum_probs=250.5

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ...+|+++|||++|+|+++|++|+.|++||||++.+...|+.|.+|+.|+++.|.+....                    
T Consensus        50 ~~~~P~i~G~E~~G~V~~vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~--------------------  109 (346)
T 4a2c_A           50 AHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFI--------------------  109 (346)
T ss_dssp             SSSSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEB--------------------
T ss_pred             CCCCCccccEEEEEEEEEECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccc--------------------
Confidence            346899999999999999999999999999999999999999999999999999976542                    


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                        +...+|+|+||+++|+++++++|++++++++|.++ .++++++ +....++++|++|||+|+|++|++++|+|+.+|+
T Consensus       110 --g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~  185 (346)
T 4a2c_A          110 --GSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGA  185 (346)
T ss_dssp             --TTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred             --cCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCC
Confidence              12346899999999999999999999999988765 3445555 5788899999999999999999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +++++++++++|+++++++|+++++++.+.+  +.+.+++++++ ++|+|+|++|.+..++.++++++++ |+++.+|..
T Consensus       186 ~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~--~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~  262 (346)
T 4a2c_A          186 KSVTAIDISSEKLALAKSFGAMQTFNSSEMS--APQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTL  262 (346)
T ss_dssp             SEEEEEESCHHHHHHHHHTTCSEEEETTTSC--HHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTT-CEEEECCCC
T ss_pred             cEEEEEechHHHHHHHHHcCCeEEEeCCCCC--HHHHHHhhcccCCcccccccccccchhhhhhheecCC-eEEEEEecc
Confidence            8889999999999999999999999998876  77888888877 9999999999989999999999998 999999976


Q ss_pred             CCCCccccc--cccccccceEEEeeecCCC--CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEE
Q 047713          249 NKDDAFKTH--PMNLLNERTLKGTFFGNYK--PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRC  323 (329)
Q Consensus       249 ~~~~~~~~~--~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kv  323 (329)
                      ..+......  ..++.+++++.|++.....  ..++++++++++.++++.++++++++|+|+++++|++.+++++. +|+
T Consensus       263 ~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKv  342 (346)
T 4a2c_A          263 HQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKV  342 (346)
T ss_dssp             SSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEE
T ss_pred             CCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEE
Confidence            654332211  2345789999998754332  23568899999999999999999999999999999999998875 598


Q ss_pred             EEe
Q 047713          324 IIR  326 (329)
Q Consensus       324 vv~  326 (329)
                      ||.
T Consensus       343 Vl~  345 (346)
T 4a2c_A          343 LLI  345 (346)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            885

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-47  Score=348.65  Aligned_cols=279  Identities=24%  Similarity=0.371  Sum_probs=240.3

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++|++|++||||+..+..+|+.|++|+.|+++.|++....   |                  
T Consensus        72 ~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~---G------------------  130 (359)
T 1h2b_A           72 KLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFP---G------------------  130 (359)
T ss_dssp             CSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCB---T------------------
T ss_pred             CCCeecCcCceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCcccc---c------------------
Confidence            6899999999999999999999999999999998899999999999999999875431   1                  


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchh---cccccccchhhhhhhc-cCCCCCCeEEEEcCCHHHHHHHHHHHHc
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVC---VLSCGISTGFGATVNV-AKPKKGQSVAIFGLGAVGLAAAEGARVS  167 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa---~~~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~iG~aai~la~~~  167 (329)
                       ...+|+|+||+++|++.++++|+++++++||   ++++++.|||+++... +++++|++|||+|+|++|++++|+|+.+
T Consensus       131 -~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~  209 (359)
T 1h2b_A          131 -LNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVM  209 (359)
T ss_dssp             -TTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHH
T ss_pred             -cCCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHc
Confidence             1235899999999999999999999999998   8888999999987665 8999999999999999999999999999


Q ss_pred             -CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHH--HHHHHHHhhccCCeEEE
Q 047713          168 -GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQ--AMISAFECVHDGWGVAV  243 (329)
Q Consensus       168 -G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~--~~~~~~~~l~~~~G~vv  243 (329)
                       |+ +|++++++++++++++++|+++++++.+.   +.+.+++++++ ++|+|||++|.+.  .++.++++  ++ |+++
T Consensus       210 ~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~---~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~~v  282 (359)
T 1h2b_A          210 TPA-TVIALDVKEEKLKLAERLGADHVVDARRD---PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GRLI  282 (359)
T ss_dssp             CCC-EEEEEESSHHHHHHHHHTTCSEEEETTSC---HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EEEE
T ss_pred             CCC-eEEEEeCCHHHHHHHHHhCCCEEEeccch---HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CEEE
Confidence             99 89999999999999999999999987653   77788888877 8999999999876  88888887  76 9999


Q ss_pred             EeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eE
Q 047713          244 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IR  322 (329)
Q Consensus       244 ~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~k  322 (329)
                      .+|..... .++. ..++.+++++.|+.....   ++++++++++.++++.  +.+ ++|+|+++++|++.+++++. +|
T Consensus       283 ~~g~~~~~-~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gK  354 (359)
T 1h2b_A          283 IVGYGGEL-RFPT-IRVISSEVSFEGSLVGNY---VELHELVTLALQGKVR--VEV-DIHKLDEINDVLERLEKGEVLGR  354 (359)
T ss_dssp             ECCCSSCC-CCCH-HHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSCC--CCE-EEEEGGGHHHHHHHHHTTCCSSE
T ss_pred             EEeCCCCC-CCCH-HHHHhCCcEEEEecCCCH---HHHHHHHHHHHcCCCc--ceE-EEEeHHHHHHHHHHHHcCCCceE
Confidence            99875543 2222 234568899998765432   5789999999999775  456 89999999999999998875 59


Q ss_pred             EEEee
Q 047713          323 CIIRM  327 (329)
Q Consensus       323 vvv~~  327 (329)
                      +||.+
T Consensus       355 vvv~~  359 (359)
T 1h2b_A          355 AVLIP  359 (359)
T ss_dssp             EEEEC
T ss_pred             EEeeC
Confidence            98864

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=9.1e-48  Score=354.81  Aligned_cols=286  Identities=21%  Similarity=0.307  Sum_probs=246.0

Q ss_pred             CCCCcccCCcceEEEEEecCCC------CcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGV------TDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFS   84 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v------~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~   84 (329)
                      ..+|.++|||++|+|+++|++|      ++|++||||++.+..+|+.|.+|+.|+++.|++....               
T Consensus        89 ~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~---------------  153 (404)
T 3ip1_A           89 TGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNEL---------------  153 (404)
T ss_dssp             BCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEB---------------
T ss_pred             CCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCcccccc---------------
Confidence            4789999999999999999999      8999999999999999999999999999999986542               


Q ss_pred             cCCCceeeccccccccccEEeeeccEEEcCCCCCc------cchhcccccccchhhhhhhc-cCCCCCCeEEEEcCCHHH
Q 047713           85 IKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPL------DKVCVLSCGISTGFGATVNV-AKPKKGQSVAIFGLGAVG  157 (329)
Q Consensus        85 ~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~------~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~iG  157 (329)
                             +...+|+|+||+++|++.++++|+.+++      .++|+++.+++|||+++... +++++|++|||+|+|++|
T Consensus       154 -------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG  226 (404)
T 3ip1_A          154 -------GFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIG  226 (404)
T ss_dssp             -------TTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHH
T ss_pred             -------CCCCCCCCcceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHH
Confidence                   1223589999999999999999998864      45889999999999997655 489999999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCH-HHHHHHHHhh
Q 047713          158 LAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSV-QAMISAFECV  235 (329)
Q Consensus       158 ~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~-~~~~~~~~~l  235 (329)
                      ++++|+|+.+|+++|++++++++++++++++|++.++++.+.+  +.+.+++++++ ++|+|||++|.+ ..++.++++|
T Consensus       227 ~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l  304 (404)
T 3ip1_A          227 LAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKEN--FVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVI  304 (404)
T ss_dssp             HHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSC--HHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCC--HHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHH
Confidence            9999999999998899999999999999999999999987766  89999999988 999999999986 3667777777


Q ss_pred             ----ccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHH
Q 047713          236 ----HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA  311 (329)
Q Consensus       236 ----~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a  311 (329)
                          +++ |+++.+|.......++. ..++.+++++.|+....  ..++++++++++.++ +.+.++++++|+|+++++|
T Consensus       305 ~~~~~~~-G~iv~~G~~~~~~~~~~-~~~~~~~~~i~g~~~~~--~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A  379 (404)
T 3ip1_A          305 WRARGIN-ATVAIVARADAKIPLTG-EVFQVRRAQIVGSQGHS--GHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEY  379 (404)
T ss_dssp             HHCSCCC-CEEEECSCCCSCEEECH-HHHHHTTCEEEECCCCC--STTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHH
T ss_pred             HhccCCC-cEEEEeCCCCCCCcccH-HHHhccceEEEEecCCC--chHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHH
Confidence                998 99999997655432222 23456889999876432  236799999999999 9888889999999999999


Q ss_pred             HHHHHcCcceEEEEeeC
Q 047713          312 FDLMLAGESIRCIIRMD  328 (329)
Q Consensus       312 ~~~~~~~~~~kvvv~~~  328 (329)
                      ++.+..   +|+||+++
T Consensus       380 ~~~~~~---GKvvl~~~  393 (404)
T 3ip1_A          380 IKRLQT---DKSLVKVT  393 (404)
T ss_dssp             HHHTTT---CTTCSCEE
T ss_pred             HHHHhC---CcEEEecC
Confidence            999873   46666654

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=6.3e-47  Score=341.53  Aligned_cols=283  Identities=29%  Similarity=0.501  Sum_probs=242.7

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCC-CCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      +.+|.++|||++|+|+++|++|+.|++||||++.+.. +|+.|++|+.|+++.|++....   |                
T Consensus        53 ~~~p~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g----------------  113 (339)
T 1rjw_A           53 PKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA---G----------------  113 (339)
T ss_dssp             CCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEB---T----------------
T ss_pred             CCCCeeccccceEEEEEECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCccee---e----------------
Confidence            4679999999999999999999999999999987765 5999999999999999875431   1                


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                         ...+|+|+||+++|++.++++|++++++++|++++++.|||+++.. .++++|++|||+|+|++|++++|+|+..|+
T Consensus       114 ---~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga  189 (339)
T 1rjw_A          114 ---YSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGIGGLGHVAVQYAKAMGL  189 (339)
T ss_dssp             ---TTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECCSTTHHHHHHHHHHTTC
T ss_pred             ---cCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence               1235799999999999999999999999999999999999998654 489999999999998899999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                       +|+++++++++.++++++|++.++++.+.+  +.+.+++.+ +++|+|||++|.+..++.++++++++ |+++.+|...
T Consensus       190 -~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~--~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  264 (339)
T 1rjw_A          190 -NVVAVDIGDEKLELAKELGADLVVNPLKED--AAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPP  264 (339)
T ss_dssp             -EEEEECSCHHHHHHHHHTTCSEEECTTTSC--HHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCS
T ss_pred             -EEEEEeCCHHHHHHHHHCCCCEEecCCCcc--HHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEecccC
Confidence             899999999999999999999999887655  777888777 68999999999888999999999998 9999998755


Q ss_pred             CCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEee
Q 047713          250 KDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRM  327 (329)
Q Consensus       250 ~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~  327 (329)
                      ..  .... ..++.+++++.|+.....   ++++++++++.++++++.   +++|+|+++++|++.+++++. +|+||++
T Consensus       265 ~~--~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (339)
T 1rjw_A          265 EE--MPIPIFDTVLNGIKIIGSIVGTR---KDLQEALQFAAEGKVKTI---IEVQPLEKINEVFDRMLKGQINGRVVLTL  336 (339)
T ss_dssp             SE--EEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             CC--CccCHHHHHhCCcEEEEeccCCH---HHHHHHHHHHHcCCCCcc---EEEEcHHHHHHHHHHHHcCCCceEEEEec
Confidence            33  2222 223468899988765433   578999999999987653   478999999999999988864 6999988


Q ss_pred             CC
Q 047713          328 DG  329 (329)
Q Consensus       328 ~~  329 (329)
                      ++
T Consensus       337 ~~  338 (339)
T 1rjw_A          337 ED  338 (339)
T ss_dssp             CC
T ss_pred             CC
Confidence            64

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=6.7e-47  Score=341.94  Aligned_cols=284  Identities=21%  Similarity=0.383  Sum_probs=245.0

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|++|+.|+++.|++....   |                 
T Consensus        55 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~---G-----------------  114 (343)
T 2eih_A           55 LPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQIL---G-----------------  114 (343)
T ss_dssp             CCSSEECCSEEEEEEEEECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEET---T-----------------
T ss_pred             CCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCcccchhhccCccccccccccc---C-----------------
Confidence            36799999999999999999999999999999999999999999999999999875431   1                 


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                        ...+|+|+||+++|++.++++|+++++++||+++++++|||+++...+++++|++|||+|+ |++|++++|+|+..|+
T Consensus       115 --~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~  192 (343)
T 2eih_A          115 --EHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA  192 (343)
T ss_dssp             --TSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC
T ss_pred             --cCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC
Confidence              1124799999999999999999999999999999999999999877679999999999987 9999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|+++++++++.+.++++|++.++++.+.+  +.+.+++.+++ ++|+|||++| .+.++.++++++++ |+++.++..
T Consensus       193 -~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~--~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~-G~~v~~g~~  267 (343)
T 2eih_A          193 -RVIATAGSEDKLRRAKALGADETVNYTHPD--WPKEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG-GRIAIAGAS  267 (343)
T ss_dssp             -EEEEEESSHHHHHHHHHHTCSEEEETTSTT--HHHHHHHHTTTTCEEEEEESSC-SSSHHHHHHHEEEE-EEEEESSCC
T ss_pred             -EEEEEeCCHHHHHHHHhcCCCEEEcCCccc--HHHHHHHHhCCCCceEEEECCC-HHHHHHHHHhhccC-CEEEEEecC
Confidence             899999999999999999999888876654  77888888776 8999999998 57889999999998 999999875


Q ss_pred             CCCC-ccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEe
Q 047713          249 NKDD-AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIR  326 (329)
Q Consensus       249 ~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~  326 (329)
                      .... .++. ..++.+++++.|+....   .++++++++++.++++.  ++++++|+|+++++|++.+++++. .|+|++
T Consensus       268 ~~~~~~~~~-~~~~~~~~~~~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~  341 (343)
T 2eih_A          268 SGYEGTLPF-AHVFYRQLSILGSTMAS---KSRLFPILRFVEEGKLK--PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQ  341 (343)
T ss_dssp             CSCCCCCCT-THHHHTTCEEEECCSCC---GGGHHHHHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEE
T ss_pred             CCCcCccCH-HHHHhCCcEEEEecCcc---HHHHHHHHHHHHcCCCC--CceeEEeeHHHHHHHHHHHHcCCCceEEEEe
Confidence            5432 1221 23356889998875332   36799999999999764  567899999999999999988765 599987


Q ss_pred             e
Q 047713          327 M  327 (329)
Q Consensus       327 ~  327 (329)
                      +
T Consensus       342 ~  342 (343)
T 2eih_A          342 V  342 (343)
T ss_dssp             C
T ss_pred             c
Confidence            5

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-47  Score=350.83  Aligned_cols=296  Identities=29%  Similarity=0.412  Sum_probs=242.5

Q ss_pred             CCCCcccCCcceEEEEEecCCCC------cCCCCCEEeecCCCCCCCCCccc-CCCCCCCccccccCCCCccccCCcccc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVT------DLQPGDHVLPVFTGECKECPHCH-SEESNMCDLLRINTDRGVMINDGQSRF   83 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~c~~c~-~g~~~~~~~~~~~~~~g~~~~~~~~~~   83 (329)
                      ..+|.++|||++|+|+++| +|+      .|++||||++.+..+|+.|++|+ +|+++.|++....   |+.....    
T Consensus        69 ~~~P~v~GhE~~G~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~---g~~~~~~----  140 (380)
T 1vj0_A           69 VPLPIILGHEGAGRVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY---GINRGCS----  140 (380)
T ss_dssp             CCSSBCCCCEEEEEEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEET---TTTCCSS----
T ss_pred             CCCCcccCcCcEEEEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCccee---ccccccC----
Confidence            3679999999999999999 999      99999999999999999999999 9999999875431   1100000    


Q ss_pred             ccCCCceeeccccccccccEEe-eeccEEEcCCCCCccchhcccccccchhhhhhhccC-CCCCCeEEEEcCCHHHHHHH
Q 047713           84 SIKGKPIYHFVGTSTFSEYTVT-HVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAK-PKKGQSVAIFGLGAVGLAAA  161 (329)
Q Consensus        84 ~~~~~~~~~~~~~g~~a~~~~v-~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag~iG~aai  161 (329)
                             ......|+|+||+++ |++.++++|+++++++.|++..+++|||+++ ..++ +++|++|||+|+|++|++++
T Consensus       141 -------~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~~Aa~~~~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~ai  212 (380)
T 1vj0_A          141 -------EYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGV  212 (380)
T ss_dssp             -------STTCCCSSSBSEEEECTTCCEEEECTTSCHHHHHHHTTHHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHH
T ss_pred             -------CCCCCCccccceEEEcccceEEECCCCCChHHhHhhhcHHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHH
Confidence                   000125899999999 9999999999999993344444999999997 6678 99999999999999999999


Q ss_pred             HHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCC-CCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCC
Q 047713          162 EGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKD-YDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGW  239 (329)
Q Consensus       162 ~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~  239 (329)
                      |+|+.+|+.+|++++++++++++++++|++.++++.. .+.++.+.+++++++ ++|+|||++|.+..++.++++++++ 
T Consensus       213 qlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~-  291 (380)
T 1vj0_A          213 VIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-  291 (380)
T ss_dssp             HHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-
T ss_pred             HHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcC-
Confidence            9999999548999999999999999999999988761 012477888888887 9999999999877899999999998 


Q ss_pred             eEEEEeccCC-C-CCccccccc-cccccceEEEeeecCCCCCCCHHHHHHHHHc--CCCCCCcceeeeeecccHHHHHHH
Q 047713          240 GVAVLVGVPN-K-DDAFKTHPM-NLLNERTLKGTFFGNYKPRSDLPSVVEKYMN--KELEVEKFITHTVPFSEINKAFDL  314 (329)
Q Consensus       240 G~vv~~g~~~-~-~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~--~~l~~~~~~~~~~~l~~i~~a~~~  314 (329)
                      |+++.+|... . ...++. .. ++.+++++.|+.....   ++++++++++.+  +++  +++++++|+|+++++|++.
T Consensus       292 G~iv~~G~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~~~g~l--~~~i~~~~~l~~~~~A~~~  365 (380)
T 1vj0_A          292 GFYSVAGVAVPQDPVPFKV-YEWLVLKNATFKGIWVSDT---SHFVKTVSITSRNYQLL--SKLITHRLPLKEANKALEL  365 (380)
T ss_dssp             EEEEECCCCSCCCCEEECH-HHHTTTTTCEEEECCCCCH---HHHHHHHHHHHTCHHHH--GGGCCEEEEGGGHHHHHHH
T ss_pred             CEEEEEecCCCCCCeeEch-HHHHHhCCeEEEEeecCCH---HHHHHHHHHHHhhcCCe--eeEEEEEEeHHHHHHHHHH
Confidence            9999998755 3 222221 23 4678999998765432   578999999999  866  5678899999999999999


Q ss_pred             HHcCcceEEEEeeCC
Q 047713          315 MLAGESIRCIIRMDG  329 (329)
Q Consensus       315 ~~~~~~~kvvv~~~~  329 (329)
                      +++++..|+||++++
T Consensus       366 ~~~~~~~Kvvl~~~g  380 (380)
T 1vj0_A          366 MESREALKVILYPEG  380 (380)
T ss_dssp             HHHTSCSCEEEECC-
T ss_pred             HhcCCCceEEEEeCC
Confidence            987764499998764

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.7e-47  Score=352.37  Aligned_cols=297  Identities=22%  Similarity=0.288  Sum_probs=243.8

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCC-CCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTD-RGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~   89 (329)
                      ..+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|++|++|+++.|.+...... .+..+          |  
T Consensus        58 ~~~p~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~----------G--  125 (398)
T 2dph_A           58 VPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAF----------G--  125 (398)
T ss_dssp             CCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBT----------T--
T ss_pred             CCCCcccCCceEEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCcccccccccccc----------c--
Confidence            4679999999999999999999999999999999999999999999999999986211000 00000          0  


Q ss_pred             eee-ccccccccccEEeeec--cEEEcCCCCCccc----hhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHH
Q 047713           90 IYH-FVGTSTFSEYTVTHVG--CVAKINPAAPLDK----VCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAE  162 (329)
Q Consensus        90 ~~~-~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~  162 (329)
                       .. ....|+|+||+++|++  .++++|+++++++    +|++++++.|||+++ ..+++++|++|||+|+|++|++++|
T Consensus       126 -~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiq  203 (398)
T 2dph_A          126 -FDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAA  203 (398)
T ss_dssp             -TTBSSCCCSSBSEEEESSHHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHH
T ss_pred             -cccCCCCceeeeeEEeccccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHH
Confidence             00 0124899999999987  8999999999998    899999999999997 7889999999999999999999999


Q ss_pred             HHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchH-HHHHHhhhcC-CccEEEEecCCH--------------H
Q 047713          163 GARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPV-QQVIADMTNG-GVDRSVECTGSV--------------Q  226 (329)
Q Consensus       163 la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~-~~d~Vid~~g~~--------------~  226 (329)
                      +|+.+|+++|++++++++++++++++|++ ++++.+.+  + .+.+++++++ ++|+|||++|..              .
T Consensus       204 lak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~~~~--~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~  280 (398)
T 2dph_A          204 GARLLGAACVIVGDQNPERLKLLSDAGFE-TIDLRNSA--PLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNG  280 (398)
T ss_dssp             HHHHHTCSEEEEEESCHHHHHHHHTTTCE-EEETTSSS--CHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTH
T ss_pred             HHHHcCCCEEEEEcCCHHHHHHHHHcCCc-EEcCCCcc--hHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHH
Confidence            99999987899999999999999999995 77776544  4 7788888888 899999999864              2


Q ss_pred             HHHHHHHhhccCCeEEEEeccCCC-C----------Cccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCC
Q 047713          227 AMISAFECVHDGWGVAVLVGVPNK-D----------DAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELE  294 (329)
Q Consensus       227 ~~~~~~~~l~~~~G~vv~~g~~~~-~----------~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~  294 (329)
                      .++.++++++++ |+++.+|.... .          ....+. ..++.+++++.++....   .+.++++++++.++++.
T Consensus       281 ~~~~~~~~l~~g-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~l~~~g~l~  356 (398)
T 2dph_A          281 ALNSLFDVVRAG-GAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV---TNYNRHLTEAILWDQMP  356 (398)
T ss_dssp             HHHHHHHHEEEE-EEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG---GGTHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHhcC-CEEEEeccccccccccccccccCCcccccHHHHhhcCCEEEEeccCc---HHHHHHHHHHHHcCCCC
Confidence            689999999998 99999987521 1          111111 12356788888754332   25789999999999987


Q ss_pred             --CCcceeeeeecccHHHHHHHHHcCcceEEEEeeC
Q 047713          295 --VEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD  328 (329)
Q Consensus       295 --~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~~  328 (329)
                        +.++++++|+|+++++|++.+.+++..|+||.++
T Consensus       357 ~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvv~~~  392 (398)
T 2dph_A          357 YLSKVMNIEVITLDQAPDGYAKFDKGSPAKFVIDPH  392 (398)
T ss_dssp             HHHHHHCEEEECSTTHHHHHHHHHTTCSCEEEECTT
T ss_pred             ccchhhEEEEEcHHHHHHHHHHHhcCCceEEEEecC
Confidence              7667889999999999999998877789999875

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=8.3e-47  Score=341.99  Aligned_cols=285  Identities=22%  Similarity=0.336  Sum_probs=233.7

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ..+|.++|||++|+|+++|++|++|++||||++.+. .+|+.|++|+.|+++.|.. ...   |+...    .....   
T Consensus        56 ~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~-~~~---~~~~~----~~~~~---  124 (348)
T 3two_A           56 GIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTK-VVF---TYDCL----DSFHD---  124 (348)
T ss_dssp             CCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTT-CEE---SSSSE----EGGGT---
T ss_pred             CCCCeecCcceeEEEEEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcc-ccc---ccccc----ccccc---
Confidence            468999999999999999999999999999998665 6899999999999999982 221   00000    00000   


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                        +....|+|+||+++|++.++++|+++++++||++++++.|||+++. ..++++|++|||+|+|++|++++|+|+.+|+
T Consensus       125 --~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga  201 (348)
T 3two_A          125 --NEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA  201 (348)
T ss_dssp             --TEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESCSHHHHHHHHHHHHTTC
T ss_pred             --CCcCCccccceEEechhhEEECCCCCCHHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC
Confidence              0122489999999999999999999999999999999999999864 5699999999999999999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                       +|++++.++++.++++++|++.++ . +.+     .++    .++|+|||++|.+..++.++++++++ |+++.+|...
T Consensus       202 -~Vi~~~~~~~~~~~~~~lGa~~v~-~-~~~-----~~~----~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~  268 (348)
T 3two_A          202 -EVSVFARNEHKKQDALSMGVKHFY-T-DPK-----QCK----EELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPP  268 (348)
T ss_dssp             -EEEEECSSSTTHHHHHHTTCSEEE-S-SGG-----GCC----SCEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCCC
T ss_pred             -eEEEEeCCHHHHHHHHhcCCCeec-C-CHH-----HHh----cCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCC
Confidence             899999999999999999999988 2 211     111    17999999999876899999999998 9999998755


Q ss_pred             -CCCc-cccccccc-cccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEE
Q 047713          250 -KDDA-FKTHPMNL-LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCII  325 (329)
Q Consensus       250 -~~~~-~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv  325 (329)
                       .... ++. ..++ .+++++.|+..+..   ++++++++++.++++++  . .++|+|+++++|++.+.+++. +|+||
T Consensus       269 ~~~~~~~~~-~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~~gKvVi  341 (348)
T 3two_A          269 VEVAPVLSV-FDFIHLGNRKVYGSLIGGI---KETQEMVDFSIKHNIYP--E-IDLILGKDIDTAYHNLTHGKAKFRYVI  341 (348)
T ss_dssp             GGGCCEEEH-HHHHHTCSCEEEECCSCCH---HHHHHHHHHHHHTTCCC--C-EEEECGGGHHHHHHHHHTTCCCSEEEE
T ss_pred             CCCcccCCH-HHHHhhCCeEEEEEecCCH---HHHHHHHHHHHhCCCCc--e-EEEEEHHHHHHHHHHHHcCCCceEEEE
Confidence             3222 221 2334 78999999876554   57899999999998765  3 479999999999999999886 59999


Q ss_pred             eeCC
Q 047713          326 RMDG  329 (329)
Q Consensus       326 ~~~~  329 (329)
                      ++++
T Consensus       342 ~~~~  345 (348)
T 3two_A          342 DMKK  345 (348)
T ss_dssp             EGGG
T ss_pred             ecCC
Confidence            8763

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=6e-46  Score=336.54  Aligned_cols=285  Identities=26%  Similarity=0.386  Sum_probs=249.0

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCC-CCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      .++|.++|||++|+|+++|++|+.|++||||++.+.. .|+.|.+|..+.++.|......                    
T Consensus        52 ~~~p~i~GhE~aG~V~~vG~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------------------  111 (348)
T 4eez_A           52 NKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNA--------------------  111 (348)
T ss_dssp             CCTTCBCCSEEEEEEEEECTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB--------------------
T ss_pred             CCCCcccceeEEEEEEEECceeeecccCCeEeecccccccCccccccCCccccccccccc--------------------
Confidence            4689999999999999999999999999999987665 5899999999999999875542                    


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                        ....+|+|+||+.+|++.++++|++++++++|++++++.|+|+++ ...++++|++|||+|+|++|.+++|+|+..+.
T Consensus       112 --~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g  188 (348)
T 4eez_A          112 --GYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFG  188 (348)
T ss_dssp             --TTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSC
T ss_pred             --ccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCC
Confidence              123358999999999999999999999999999999999999975 67789999999999999999999999997755


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      .+|++++++++|+++++++|++.++++.+.+  +.+.+++++++ ++|.++++++++..+..++++++++ |+++.++..
T Consensus       189 ~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~--~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~  265 (348)
T 4eez_A          189 AKVIAVDINQDKLNLAKKIGADVTINSGDVN--PVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPM-GKMVAVAVP  265 (348)
T ss_dssp             CEEEEEESCHHHHHHHHHTTCSEEEEC-CCC--HHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEE-EEEEECCCC
T ss_pred             CEEEEEECcHHHhhhhhhcCCeEEEeCCCCC--HHHHhhhhcCCCCceEEEEeccCcchhheeheeecCC-ceEEEEecc
Confidence            5999999999999999999999999998877  88999999988 9999999999999999999999998 999999875


Q ss_pred             CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEee
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIRM  327 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~~  327 (329)
                      ......+. ..++.+++++.|+..++.   ++++++++++.+|+++  +. .++|||+++++|++.+++++. +|+||++
T Consensus       266 ~~~~~~~~-~~~~~~~~~i~gs~~~~~---~~~~~~~~l~~~g~i~--p~-~~~~~l~~~~~A~~~l~~g~~~GKvVl~~  338 (348)
T 4eez_A          266 NTEMTLSV-PTVVFDGVEVAGSLVGTR---LDLAEAFQFGAEGKVK--PI-VATRKLEEINDIIDEMKAGKIEGRMVIDF  338 (348)
T ss_dssp             SCEEEECH-HHHHHSCCEEEECCSCCH---HHHHHHHHHHHTTSCC--CC-EEEECGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             CCCCccCH-HHHHhCCeEEEEEecCCH---HHHHHHHHHHHcCCCE--EE-EEEEeHHHHHHHHHHHHCCCCccEEEEEc
Confidence            54433222 334678999999876554   6799999999999875  33 579999999999999999886 5999998


Q ss_pred             C
Q 047713          328 D  328 (329)
Q Consensus       328 ~  328 (329)
                      +
T Consensus       339 s  339 (348)
T 4eez_A          339 T  339 (348)
T ss_dssp             C
T ss_pred             c
Confidence            6

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-45  Score=333.02  Aligned_cols=285  Identities=22%  Similarity=0.369  Sum_probs=241.0

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCC-CCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      +.+|.++|||++|+|+++|++|+.|++||||++.+.. +|+.|++|+.|+++.|++....   |                
T Consensus        58 ~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g----------------  118 (347)
T 2hcy_A           58 VKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS---G----------------  118 (347)
T ss_dssp             CCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEB---T----------------
T ss_pred             CCCCcccCccceEEEEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCcccccc---c----------------
Confidence            4679999999999999999999999999999987765 5999999999999999875431   1                


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G  168 (329)
                         ...+|+|+||+++|++.++++|++++++++|++++++.|||+++. ..++++|++|||+|+ |++|++++|+|+..|
T Consensus       119 ---~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G  194 (347)
T 2hcy_A          119 ---YTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALK-SANLMAGHWVAISGAAGGLGSLAVQYAKAMG  194 (347)
T ss_dssp             ---TTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHHH-TTTCCTTCEEEEETTTSHHHHHHHHHHHHTT
T ss_pred             ---cCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHCC
Confidence               123589999999999999999999999999999999999999864 458999999999987 999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCC-CCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKD-YDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      + +|+++++++++.+.++++|++.+++..+ .+  +.+.+++.+.+++|+|||++|....++.++++++++ |+++.++.
T Consensus       195 a-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~--~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~  270 (347)
T 2hcy_A          195 Y-RVLGIDGGEGKEELFRSIGGEVFIDFTKEKD--IVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGM  270 (347)
T ss_dssp             C-EEEEEECSTTHHHHHHHTTCCEEEETTTCSC--HHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEE-EEEEECCC
T ss_pred             C-cEEEEcCCHHHHHHHHHcCCceEEecCccHh--HHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeC
Confidence            9 8999999999999999999988887653 33  777888777568999999999878899999999998 99999987


Q ss_pred             CCCCCccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEE
Q 047713          248 PNKDDAFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCII  325 (329)
Q Consensus       248 ~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv  325 (329)
                      ..... .... ..++.+++++.|+.....   ++++++++++.++++.+.   +++|+|+++++|++.+.+++. +|+||
T Consensus       271 ~~~~~-~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvv  343 (347)
T 2hcy_A          271 PAGAK-CCSDVFNQVVKSISIVGSYVGNR---ADTREALDFFARGLVKSP---IKVVGLSTLPEIYEKMEKGQIVGRYVV  343 (347)
T ss_dssp             CTTCE-EEEEHHHHHHTTCEEEECCCCCH---HHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEE
T ss_pred             CCCCC-CCCCHHHHhhCCcEEEEccCCCH---HHHHHHHHHHHhCCCccc---eEEEcHHHHHHHHHHHHcCCcceeEEE
Confidence            54321 2222 223468899988765433   578999999999987653   478999999999999988864 69999


Q ss_pred             eeCC
Q 047713          326 RMDG  329 (329)
Q Consensus       326 ~~~~  329 (329)
                      +++.
T Consensus       344 ~~~~  347 (347)
T 2hcy_A          344 DTSK  347 (347)
T ss_dssp             ESCC
T ss_pred             ecCC
Confidence            8763

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.6e-46  Score=344.74  Aligned_cols=298  Identities=23%  Similarity=0.291  Sum_probs=239.3

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++|+.|++||||++.+..+|+.|++|++|+++.|++..... .+-.+          |... 
T Consensus        60 ~~p~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~~~~~----------g~~~-  127 (398)
T 1kol_A           60 QVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPAR-AGGAY----------GYVD-  127 (398)
T ss_dssp             CTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSS-SCEEB----------TCTT-
T ss_pred             CCCcccCcccEEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCccccc-cccee----------eecc-
Confidence            57899999999999999999999999999999998999999999999999998753210 00000          0000 


Q ss_pred             eccccccccccEEeeec--cEEEcCCCCCccc----hhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHH
Q 047713           92 HFVGTSTFSEYTVTHVG--CVAKINPAAPLDK----VCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGAR  165 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~--~~~~~p~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~  165 (329)
                      .....|+|+||+++|++  .++++|+++++++    +|+++++++|||+++. .+++++|++|||+|+|++|++++|+|+
T Consensus       128 ~~~~~G~~aey~~v~~~~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlAk  206 (398)
T 1kol_A          128 MGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGAGPVGLAAAASAR  206 (398)
T ss_dssp             SCCBCCCSBSEEEESSHHHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHH
T ss_pred             CCCCCceeeeEEEecchhCeEEECCCCcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECCcHHHHHHHHHHH
Confidence            00124899999999986  8999999999887    7889999999999974 789999999999999999999999999


Q ss_pred             HcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCH---------------HHHH
Q 047713          166 VSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSV---------------QAMI  229 (329)
Q Consensus       166 ~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~---------------~~~~  229 (329)
                      .+|+++|++++++++++++++++|++ ++++.+.+ .+.+.+++++++ ++|+|||++|..               ..++
T Consensus       207 ~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~~~~-~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~  284 (398)
T 1kol_A          207 LLGAAVVIVGDLNPARLAHAKAQGFE-IADLSLDT-PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLN  284 (398)
T ss_dssp             HTTCSEEEEEESCHHHHHHHHHTTCE-EEETTSSS-CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHH
T ss_pred             HCCCCeEEEEcCCHHHHHHHHHcCCc-EEccCCcc-hHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHH
Confidence            99997899999999999999999997 67665432 277888888887 899999999875               3789


Q ss_pred             HHHHhhccCCeEEEEeccCC-CCC----------ccccc-cccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCC-CC
Q 047713          230 SAFECVHDGWGVAVLVGVPN-KDD----------AFKTH-PMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELE-VE  296 (329)
Q Consensus       230 ~~~~~l~~~~G~vv~~g~~~-~~~----------~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~-~~  296 (329)
                      .++++++++ |+++.+|... ...          ...+. ..++.+++++.+.....   .+.++++++++.++++. ..
T Consensus       285 ~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~l~~~g~l~~~~  360 (398)
T 1kol_A          285 SLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPV---MKYNRALMQAIMWDRINIAE  360 (398)
T ss_dssp             HHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCCH---HHHHHHHHHHHHTTSCCHHH
T ss_pred             HHHHHHhcC-CEEEEeccccCCcccccccccccccccccHHHHhhcccEEEecccCh---HHHHHHHHHHHHcCCCCCcc
Confidence            999999998 9999998641 111          11111 12345778887643211   14577899999999887 34


Q ss_pred             cceeeeeecccHHHHHHHHHcCcceEEEEeeC
Q 047713          297 KFITHTVPFSEINKAFDLMLAGESIRCIIRMD  328 (329)
Q Consensus       297 ~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~~  328 (329)
                      ++++++|+|+|+++|++.+.+++..|+||+++
T Consensus       361 ~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~~  392 (398)
T 1kol_A          361 VVGVQVISLDDAPRGYGEFDAGVPKKFVIDPH  392 (398)
T ss_dssp             HHTEEEECGGGHHHHHHHHHHTCSCEEEECTT
T ss_pred             ceeEEEEcHHHHHHHHHHHhCCCceEEEEEeC
Confidence            56789999999999999998877789999875

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.2e-45  Score=333.78  Aligned_cols=278  Identities=24%  Similarity=0.359  Sum_probs=220.7

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|||++|+|+++|++ ++|++||||+..+..+|+.|.+|++|+++.|++....   |                  
T Consensus        58 ~~p~i~G~E~~G~V~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~---G------------------  115 (344)
T 2h6e_A           58 RLPIILGHENAGTIVEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIP---G------------------  115 (344)
T ss_dssp             CSSEECCCCEEEEEEEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCB---T------------------
T ss_pred             CCCccccccceEEEEEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCcccc---c------------------
Confidence            67999999999999999999 9999999999888889999999999999999875321   1                  


Q ss_pred             eccccccccccEEee-eccEEEcCCCCCccchhcccccccchhhhhhhc----cCCCCCCeEEEEcCCHHHHHHHHHHHH
Q 047713           92 HFVGTSTFSEYTVTH-VGCVAKINPAAPLDKVCVLSCGISTGFGATVNV----AKPKKGQSVAIFGLGAVGLAAAEGARV  166 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~-~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~----~~~~~g~~VlI~Gag~iG~aai~la~~  166 (329)
                       ...+|+|+||+++| ++.++++ ++++++++|++++++.|||+++...    .++ +|++|||+|+|++|++++|+|+.
T Consensus       116 -~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~  192 (344)
T 2h6e_A          116 -QTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKA  192 (344)
T ss_dssp             -TTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHH
T ss_pred             -cccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHH
Confidence             12358999999999 9999999 9999999999999999999997654    288 99999999999999999999999


Q ss_pred             c--CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEE
Q 047713          167 S--GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAV  243 (329)
Q Consensus       167 ~--G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv  243 (329)
                      +  |+ +|++++++++++++++++|+++++++.+.    .+.+++++.+ ++|+|||++|.+..++.++++++++ |+++
T Consensus       193 ~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~----~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv  266 (344)
T 2h6e_A          193 LMKNI-TIVGISRSKKHRDFALELGADYVSEMKDA----ESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAII  266 (344)
T ss_dssp             HCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHHH----HHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE-EEEE
T ss_pred             hcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccccc----hHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC-CEEE
Confidence            9  99 79999999999999999999999876430    1234455556 8999999999877899999999998 9999


Q ss_pred             EeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eE
Q 047713          244 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IR  322 (329)
Q Consensus       244 ~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~k  322 (329)
                      .+|.......++. ..++.+++++.|+.....   ++++++++++.++++.  +.+ ++|+|+++++|++.+++++. +|
T Consensus       267 ~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~i~--~~i-~~~~l~~~~~A~~~~~~~~~~gK  339 (344)
T 2h6e_A          267 LVGMEGKRVSLEA-FDTAVWNKKLLGSNYGSL---NDLEDVVRLSESGKIK--PYI-IKVPLDDINKAFTNLDEGRVDGR  339 (344)
T ss_dssp             ECCCCSSCCCCCH-HHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSC--CCE-EEECC----------------CE
T ss_pred             EeCCCCCCcccCH-HHHhhCCcEEEEEecCCH---HHHHHHHHHHHcCCCC--cce-EEEeHHHHHHHHHHHHcCCCceE
Confidence            9987544322221 233568899988765432   5789999999999775  446 89999999999999988775 59


Q ss_pred             EEEee
Q 047713          323 CIIRM  327 (329)
Q Consensus       323 vvv~~  327 (329)
                      +||++
T Consensus       340 vvl~~  344 (344)
T 2h6e_A          340 QVITP  344 (344)
T ss_dssp             EEECC
T ss_pred             EEEeC
Confidence            98863

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.6e-45  Score=333.47  Aligned_cols=282  Identities=25%  Similarity=0.346  Sum_probs=242.3

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++|++|++||||+..+..+|+.|++|+.|+++.|++....   |                 
T Consensus        60 ~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~---G-----------------  119 (347)
T 1jvb_A           60 VKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL---G-----------------  119 (347)
T ss_dssp             CCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEB---T-----------------
T ss_pred             CCCCccccccceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccc---c-----------------
Confidence            36799999999999999999999999999999888889999999999999999875431   1                 


Q ss_pred             eeccccccccccEEeee-ccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHc-
Q 047713           91 YHFVGTSTFSEYTVTHV-GCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVS-  167 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~-~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~-  167 (329)
                        ...+|+|+||+++|+ +.++++ ++++++++|++++++.|||+++ ..+++++|++|||+|+ |++|++++|+|+.. 
T Consensus       120 --~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~  195 (347)
T 1jvb_A          120 --INFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS  195 (347)
T ss_dssp             --TTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHT
T ss_pred             --ccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHHHHHHH-HhcCCCCCCEEEEECCCccHHHHHHHHHHHcC
Confidence              123579999999999 999999 9999999999999999999986 4589999999999987 59999999999999 


Q ss_pred             CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc-CCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          168 GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN-GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       168 G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+ +|+++++++++.+.++++|++.++++.+.+  +.+.+++++. +++|++||++|.+..++.++++++++ |+++.+|
T Consensus       196 Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g  271 (347)
T 1jvb_A          196 GA-TIIGVDVREEAVEAAKRAGADYVINASMQD--PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVG  271 (347)
T ss_dssp             CC-EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECC
T ss_pred             CC-eEEEEcCCHHHHHHHHHhCCCEEecCCCcc--HHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEEC
Confidence            99 899999999999999999999988877655  7777888776 58999999999877899999999998 9999998


Q ss_pred             cCC-CCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEE
Q 047713          247 VPN-KDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCI  324 (329)
Q Consensus       247 ~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvv  324 (329)
                      ... .. .++. ..++.+++++.|+.....   ++++++++++.++++  +++++++|+|+++++|++.+++++. +|+|
T Consensus       272 ~~~~~~-~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~gKvv  344 (347)
T 1jvb_A          272 LFGADL-HYHA-PLITLSEIQFVGSLVGNQ---SDFLGIMRLAEAGKV--KPMITKTMKLEEANEAIDNLENFKAIGRQV  344 (347)
T ss_dssp             SSCCCC-CCCH-HHHHHHTCEEEECCSCCH---HHHHHHHHHHHTTSS--CCCCEEEEEGGGHHHHHHHHHTTCCCSEEE
T ss_pred             CCCCCC-CCCH-HHHHhCceEEEEEeccCH---HHHHHHHHHHHcCCC--CceEEEEEcHHHHHHHHHHHHCCCCcceEE
Confidence            755 32 2221 233568899988765432   578999999999976  4567899999999999999998875 5998


Q ss_pred             Eee
Q 047713          325 IRM  327 (329)
Q Consensus       325 v~~  327 (329)
                      |++
T Consensus       345 l~~  347 (347)
T 1jvb_A          345 LIP  347 (347)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            864

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=3.4e-46  Score=339.44  Aligned_cols=284  Identities=21%  Similarity=0.344  Sum_probs=235.2

Q ss_pred             CCCcccCCcceEEEEEecCCCC-cCCCCCEEeecC-CCCCCCCCcccCCCCCCCccc-cccCCCCccccCCccccccCCC
Q 047713           12 LFPRIFGHEAGGIVESVGEGVT-DLQPGDHVLPVF-TGECKECPHCHSEESNMCDLL-RINTDRGVMINDGQSRFSIKGK   88 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~-~~~~~~c~~c~~g~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~   88 (329)
                      .+|.++|||++|+|+++|++|+ +|++||||++.+ ..+|+.|++|++|+++.|++. ......  . .        .  
T Consensus        61 ~~p~v~GhE~~G~V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~--~-~--------~--  127 (360)
T 1piw_A           61 KMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQP--Y-E--------D--  127 (360)
T ss_dssp             CSSEECCCCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCB--C-T--------T--
T ss_pred             CCCcccCcCceEEEEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccc--c-C--------C--
Confidence            5799999999999999999999 999999996554 468999999999999999864 111000  0 0        0  


Q ss_pred             ceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           89 PIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        89 ~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                         +...+|+|+||+++|++.++++|+++++++||++++++.|||+++.. +++++|++|||+|+|++|++++|+|+.+|
T Consensus       128 ---g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~G  203 (360)
T 1piw_A          128 ---GYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMG  203 (360)
T ss_dssp             ---SCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHT
T ss_pred             ---CccCCCcceeEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCC
Confidence               11235899999999999999999999999999999999999999755 89999999999999999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCC-CchHHHHHHhhhcCCccEEEEecCC--HHHHHHHHHhhccCCeEEEEe
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY-DKPVQQVIADMTNGGVDRSVECTGS--VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~d~Vid~~g~--~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      + +|++++++++++++++++|++.++++.+. +  +.+.++    +++|+|||++|.  +..++.++++++++ |+++.+
T Consensus       204 a-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~--~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~-G~iv~~  275 (360)
T 1piw_A          204 A-ETYVISRSSRKREDAMKMGADHYIATLEEGD--WGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSI  275 (360)
T ss_dssp             C-EEEEEESSSTTHHHHHHHTCSEEEEGGGTSC--HHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEEC
T ss_pred             C-EEEEEcCCHHHHHHHHHcCCCEEEcCcCchH--HHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCC-CEEEEe
Confidence            9 79999999999999999999999987654 4  544333    579999999987  67888999999998 999999


Q ss_pred             ccCCCCC-ccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeeccc--HHHHHHHHHcCcc-e
Q 047713          246 GVPNKDD-AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSE--INKAFDLMLAGES-I  321 (329)
Q Consensus       246 g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~--i~~a~~~~~~~~~-~  321 (329)
                      |.... . .++. ..++.+++++.|+.....   ++++++++++.++++.+  .+ ++|+|++  +++|++.+++++. +
T Consensus       276 g~~~~-~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~--~i-~~~~l~~~~~~~A~~~~~~~~~~g  347 (360)
T 1piw_A          276 SIPEQ-HEMLSL-KPYGLKAVSISYSALGSI---KELNQLLKLVSEKDIKI--WV-ETLPVGEAGVHEAFERMEKGDVRY  347 (360)
T ss_dssp             CCCCS-SCCEEE-CGGGCBSCEEEECCCCCH---HHHHHHHHHHHHTTCCC--CE-EEEESSHHHHHHHHHHHHHTCCSS
T ss_pred             cCCCC-ccccCH-HHHHhCCeEEEEEecCCH---HHHHHHHHHHHhCCCcc--eE-EEEeccHhHHHHHHHHHHCCCCce
Confidence            87554 2 2221 234568899988765432   57899999999998754  45 8999999  9999999988775 5


Q ss_pred             EEEEeeC
Q 047713          322 RCIIRMD  328 (329)
Q Consensus       322 kvvv~~~  328 (329)
                      |+||+++
T Consensus       348 Kvvi~~~  354 (360)
T 1piw_A          348 RFTLVGY  354 (360)
T ss_dssp             EEEEECC
T ss_pred             EEEEecC
Confidence            9999875

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.6e-46  Score=339.89  Aligned_cols=289  Identities=22%  Similarity=0.349  Sum_probs=233.7

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCC-CCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ..+|.++|||++|+|+++|++|+.|++||||++.+.. .|+.|++|++|+++.|++...... +..        +..   
T Consensus        74 ~~~P~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~-~~~--------~~~---  141 (369)
T 1uuf_A           74 TVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYN-SPT--------PDE---  141 (369)
T ss_dssp             CCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTT-SBC--------SST---
T ss_pred             CCCCeecccCceEEEEEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccc-ccc--------ccC---
Confidence            3579999999999999999999999999999987765 699999999999999987521100 000        000   


Q ss_pred             eeeccccccccccEEeeeccEEEcCCC-CCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPA-APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~-~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                        +...+|+|+||+++|++.++++|++ +++++||++++++.|||+++.. .++++|++|||+|+|++|++++|+|+.+|
T Consensus       142 --g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~G  218 (369)
T 1uuf_A          142 --PGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMG  218 (369)
T ss_dssp             --TSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred             --CCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHCC
Confidence              0122489999999999999999999 9999999999999999998654 68999999999999999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      + +|++++.+++++++++++|++.++++.+.+  +   ++++. +++|+|||++|.+..++.++++++++ |+++.+|..
T Consensus       219 a-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~---~~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~  290 (369)
T 1uuf_A          219 A-HVVAFTTSEAKREAAKALGADEVVNSRNAD--E---MAAHL-KSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAP  290 (369)
T ss_dssp             C-EEEEEESSGGGHHHHHHHTCSEEEETTCHH--H---HHTTT-TCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC
T ss_pred             C-EEEEEeCCHHHHHHHHHcCCcEEeccccHH--H---HHHhh-cCCCEEEECCCCHHHHHHHHHHhccC-CEEEEeccC
Confidence            9 799999999999999999999998876532  2   33333 57999999999866789999999998 999999875


Q ss_pred             CCCC-ccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEe
Q 047713          249 NKDD-AFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIR  326 (329)
Q Consensus       249 ~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~  326 (329)
                      .... .++. ..++.+++++.|+.....   ++++++++++.++++.+  .+ +.|+|+++++|++.+.+++. +|+||.
T Consensus       291 ~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~i~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvi~  363 (369)
T 1uuf_A          291 ATPHKSPEV-FNLIMKRRAIAGSMIGGI---PETQEMLDFCAEHGIVA--DI-EMIRADQINEAYERMLRGDVKYRFVID  363 (369)
T ss_dssp             -------CH-HHHHTTTCEEEECCSCCH---HHHHHHHHHHHHHTCCC--CE-EEECGGGHHHHHHHHHTTCSSSEEEEE
T ss_pred             CCCccccCH-HHHHhCCcEEEEeecCCH---HHHHHHHHHHHhCCCCc--ce-EEEcHHHHHHHHHHHHcCCCceEEEEe
Confidence            4332 1221 234568899998765433   56889999999997754  34 57999999999999998875 699998


Q ss_pred             eCC
Q 047713          327 MDG  329 (329)
Q Consensus       327 ~~~  329 (329)
                      +++
T Consensus       364 ~~~  366 (369)
T 1uuf_A          364 NRT  366 (369)
T ss_dssp             GGG
T ss_pred             cCC
Confidence            753

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=7e-45  Score=331.02  Aligned_cols=283  Identities=21%  Similarity=0.275  Sum_probs=238.0

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ...+|.++|||++|+|+++|++|++|++||||++.+..      .|..|+ +.|.+......                  
T Consensus        80 ~~~~P~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~------------------  134 (363)
T 3uog_A           80 DLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYE------------------  134 (363)
T ss_dssp             CCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCC------------------
T ss_pred             CCCCCcCcccceEEEEEEECCCCCCCCCCCEEEEeccc------cccccc-ccccccccccc------------------
Confidence            34789999999999999999999999999999987643      677788 88874211000                  


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA  169 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~  169 (329)
                      ..+...+|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+..|+
T Consensus       135 ~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga  214 (363)
T 3uog_A          135 TLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA  214 (363)
T ss_dssp             CTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC
T ss_pred             ccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence            00122358999999999999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|++++.+++++++++++|++.+++..+.+  +.+.+++++++ ++|+|||++|. ..++.++++++++ |+++.+|..
T Consensus       215 -~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~~~~v~~~~~g~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~  289 (363)
T 3uog_A          215 -EVIVTSSSREKLDRAFALGADHGINRLEED--WVERVYALTGDRGADHILEIAGG-AGLGQSLKAVAPD-GRISVIGVL  289 (363)
T ss_dssp             -EEEEEESCHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHHTTCCEEEEEEETTS-SCHHHHHHHEEEE-EEEEEECCC
T ss_pred             -EEEEEecCchhHHHHHHcCCCEEEcCCccc--HHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhhcC-CEEEEEecC
Confidence             899999999999999999999999844344  88899999988 99999999984 6889999999998 999999875


Q ss_pred             CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEEEee
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM  327 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvvv~~  327 (329)
                      ...........++.+++++.|+.....   ++++++++++.++++  +++++++|+|+++++|++.+.+++.+|+||++
T Consensus       290 ~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~  363 (363)
T 3uog_A          290 EGFEVSGPVGPLLLKSPVVQGISVGHR---RALEDLVGAVDRLGL--KPVIDMRYKFTEVPEALAHLDRGPFGKVVIEF  363 (363)
T ss_dssp             SSCEECCBTTHHHHTCCEEEECCCCCH---HHHHHHHHHHHHHTC--CCCEEEEEEGGGHHHHHHTGGGCCSBEEEEEC
T ss_pred             CCcccCcCHHHHHhCCcEEEEEecCCH---HHHHHHHHHHHcCCC--ccceeeEEcHHHHHHHHHHHHcCCCccEEEeC
Confidence            543111112234578999998876543   678999999999965  56788999999999999999988856999875

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.8e-45  Score=334.27  Aligned_cols=288  Identities=23%  Similarity=0.356  Sum_probs=235.1

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ..+|.++|||++|+|+++|++|+.|++||||++.+. .+|+.|++|++|+++.|.+...... +..              
T Consensus        61 ~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~-~~~--------------  125 (357)
T 2cf5_A           61 SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYN-DVY--------------  125 (357)
T ss_dssp             CCSSBCCCCEEEEEEEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTT-SBC--------------
T ss_pred             CCCCeecCcceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCcccccc-ccc--------------
Confidence            467999999999999999999999999999987654 5899999999999999975432110 000              


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCC-CCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPK-KGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~-~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                      ..+...+|+|+||+++|++.++++|++++++++|++++++.|||+++. ..+++ +|++|||+|+|++|++++|+|+.+|
T Consensus       126 ~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G  204 (357)
T 2cf5_A          126 INGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLS-HFGLKQPGLRGGILGLGGVGHMGVKIAKAMG  204 (357)
T ss_dssp             TTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHHHHHHHHH-HTSTTSTTCEEEEECCSHHHHHHHHHHHHHT
T ss_pred             cCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHHHHHHHHH-hcCCCCCCCEEEEECCCHHHHHHHHHHHHCC
Confidence            001123589999999999999999999999999999999999999864 56788 9999999999999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHH-hcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          169 ASRIIGVDLNPSRFNEAK-KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      + +|+++++++++++.++ ++|+++++++.+.     +.+++++ +++|+|||++|.+..++.++++++++ |+++.+|.
T Consensus       205 a-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~-----~~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~  276 (357)
T 2cf5_A          205 H-HVTVISSSNKKREEALQDLGADDYVIGSDQ-----AKMSELA-DSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGV  276 (357)
T ss_dssp             C-EEEEEESSTTHHHHHHTTSCCSCEEETTCH-----HHHHHST-TTEEEEEECCCSCCCSHHHHTTEEEE-EEEEECSC
T ss_pred             C-eEEEEeCChHHHHHHHHHcCCceeeccccH-----HHHHHhc-CCCCEEEECCCChHHHHHHHHHhccC-CEEEEeCC
Confidence            9 8999999999999887 9999999887542     3455554 37999999999766789999999998 99999987


Q ss_pred             CCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEe
Q 047713          248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIR  326 (329)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~  326 (329)
                      ...... .....++.+++++.|+.....   ++++++++++.++++.+.  + ++|||+++++|++.+++++. .|+||+
T Consensus       277 ~~~~~~-~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvi~  349 (357)
T 2cf5_A          277 INNPLQ-FLTPLLMLGRKVITGSFIGSM---KETEEMLEFCKEKGLSSI--I-EVVKMDYVNTAFERLEKNDVRYRFVVD  349 (357)
T ss_dssp             CSSCCC-CCHHHHHHHTCEEEECCSCCH---HHHHHHHHHHHHTTCCCC--E-EEEEGGGHHHHHHHHHTTCSSSEEEEE
T ss_pred             CCCCcc-ccCHHHHhCccEEEEEccCCH---HHHHHHHHHHHcCCCCCc--e-EEEeHHHHHHHHHHHHCCCCceEEEEe
Confidence            543322 011125678899998765432   568899999999987643  4 79999999999999998875 599998


Q ss_pred             eCC
Q 047713          327 MDG  329 (329)
Q Consensus       327 ~~~  329 (329)
                      +++
T Consensus       350 ~~~  352 (357)
T 2cf5_A          350 VEG  352 (357)
T ss_dssp             TTS
T ss_pred             CCc
Confidence            753

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=1.8e-46  Score=340.79  Aligned_cols=279  Identities=20%  Similarity=0.269  Sum_probs=234.4

Q ss_pred             CcccCCcceEEEEEecCCCCcCCCCCEEeecCCCC--CCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           14 PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGE--CKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        14 P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~--~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      |.++|||++| |+++|++ ++|++||||++.+..+  |+.|++|++|+++.|++..... .|+                 
T Consensus        58 p~v~G~E~~G-V~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g~-----------------  117 (357)
T 2b5w_A           58 HLVLGHEAVG-VVVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFE-RGI-----------------  117 (357)
T ss_dssp             EEECCSEEEE-EEEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEE-ETT-----------------
T ss_pred             CcccCceeEE-EEEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccc-cCc-----------------
Confidence            8999999999 9999999 9999999999998888  9999999999999999753210 010                 


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCC------CeEEEEcCCHHHHHH-HHHH
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKG------QSVAIFGLGAVGLAA-AEGA  164 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g------~~VlI~Gag~iG~aa-i~la  164 (329)
                       ...+|+|+||+++|++.++++|++++ + +|+++.+++|||+++ ..+++++|      ++|||+|+|++|+++ +|+|
T Consensus       118 -~~~~G~~aey~~v~~~~~~~iP~~~~-~-~aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla  193 (357)
T 2b5w_A          118 -VGAHGYMSEFFTSPEKYLVRIPRSQA-E-LGFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLK  193 (357)
T ss_dssp             -BEECCSCBSEEEEEGGGEEECCGGGS-T-TGGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHH
T ss_pred             -cCCCcceeeEEEEchHHeEECCCCcc-h-hhhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHH
Confidence             01247999999999999999999999 5 566889999999997 67889999      999999999999999 9999


Q ss_pred             -HHcCCCEEEEEcCChh---hHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCe
Q 047713          165 -RVSGASRIIGVDLNPS---RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWG  240 (329)
Q Consensus       165 -~~~G~~~vv~~~~~~~---~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G  240 (329)
                       +.+|+++|++++++++   +.++++++|++++ ++.+.+  +.+ ++++ ++++|+|||++|....++.++++++++ |
T Consensus       194 ~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~~~--~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~-G  267 (357)
T 2b5w_A          194 VDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQTP--VED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPN-G  267 (357)
T ss_dssp             HCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTTSC--GGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEE-E
T ss_pred             HHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCccC--HHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcC-C
Confidence             9999955999999998   9999999999988 776654  666 7777 558999999999877899999999998 9


Q ss_pred             EEEEeccCC-CCCcccccccc----ccccceEEEeeecCCCCCCCHHHHHHHHHcC--CCCCCcceeeeeecccHHHHHH
Q 047713          241 VAVLVGVPN-KDDAFKTHPMN----LLNERTLKGTFFGNYKPRSDLPSVVEKYMNK--ELEVEKFITHTVPFSEINKAFD  313 (329)
Q Consensus       241 ~vv~~g~~~-~~~~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~--~l~~~~~~~~~~~l~~i~~a~~  313 (329)
                      +++.+|... ....++. ..+    +.+++++.|+.....   ++++++++++.++  ++ ++++++++|+|+++++|++
T Consensus       268 ~iv~~g~~~~~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~~~~-~~~~i~~~~~l~~~~~A~~  342 (357)
T 2b5w_A          268 VGALLGVPSDWAFEVDA-GAFHREMVLHNKALVGSVNSHV---EHFEAATVTFTKLPKWF-LEDLVTGVHPLSEFEAAFD  342 (357)
T ss_dssp             EEEECCCCCCCCCCCCH-HHHHHHHHHTTCEEEECCCCCH---HHHHHHHHHHHHSCHHH-HHHHEEEEEEGGGGGGGGC
T ss_pred             EEEEEeCCCCCCceecH-HHHhHHHHhCCeEEEEeccCCH---HHHHHHHHHHHhCchhh-hhhhcceeecHHHHHHHHH
Confidence            999998765 2222221 223    568899988765432   5789999999999  76 6778889999999999999


Q ss_pred             HHHcCcceEEEEeeCC
Q 047713          314 LMLAGESIRCIIRMDG  329 (329)
Q Consensus       314 ~~~~~~~~kvvv~~~~  329 (329)
                      .+  +...|+||++++
T Consensus       343 ~~--~~~gKvvi~~~~  356 (357)
T 2b5w_A          343 DD--DTTIKTAIEFST  356 (357)
T ss_dssp             CS--TTCCEEEEECCC
T ss_pred             Hh--CCCceEEEEecC
Confidence            88  456799998864

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=4e-44  Score=335.31  Aligned_cols=287  Identities=16%  Similarity=0.185  Sum_probs=240.9

Q ss_pred             CCC-cccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           12 LFP-RIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        12 ~~P-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .+| .++|||++|+|+++|++|+.|++||||++.+ ..|..|..|..+.++.|++....   |+                
T Consensus       115 ~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-~~c~~~~~~~~~~~~~c~~~~~~---G~----------------  174 (456)
T 3krt_A          115 DLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHC-LSVELESSDGHNDTMLDPEQRIW---GF----------------  174 (456)
T ss_dssp             CCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECC-EECCCCSGGGTTSGGGCTTCEET---TT----------------
T ss_pred             CCCcccccceeEEEEEEECCCCCCCCCCCEEEEeC-CcccccccccccccccCcccccc---cc----------------
Confidence            567 6999999999999999999999999999854 46888999999999999876542   11                


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhc--cCCCCCCeEEEEcC-CHHHHHHHHHHHHc
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNV--AKPKKGQSVAIFGL-GAVGLAAAEGARVS  167 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~VlI~Ga-g~iG~aai~la~~~  167 (329)
                        ...+|+|+||+++|+++++++|+++++++||++++++.|||+++...  +++++|++|||+|+ |++|++++|+|+..
T Consensus       175 --~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~  252 (456)
T 3krt_A          175 --ETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAG  252 (456)
T ss_dssp             --TSSSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHT
T ss_pred             --CCCCCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence              11248999999999999999999999999999999999999987654  78999999999997 99999999999999


Q ss_pred             CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCc---------------hHHHHHHhhhcC-CccEEEEecCCHHHHHHH
Q 047713          168 GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDK---------------PVQQVIADMTNG-GVDRSVECTGSVQAMISA  231 (329)
Q Consensus       168 G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~---------------~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~  231 (329)
                      |+ +|+++++++++.++++++|++.++++.+.+.               .+.+.+++++++ ++|+|||++|. ..+..+
T Consensus       253 Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~-~~~~~~  330 (456)
T 3krt_A          253 GA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR-ETFGAS  330 (456)
T ss_dssp             TC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH-HHHHHH
T ss_pred             CC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc-hhHHHH
Confidence            99 7888888999999999999999998766431               245788888887 99999999987 789999


Q ss_pred             HHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHH
Q 047713          232 FECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA  311 (329)
Q Consensus       232 ~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a  311 (329)
                      +++++++ |+++.+|.............++.++.++.|++...+   +++.++++++.++++.  ++++++|+|+++++|
T Consensus       331 ~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~eA  404 (456)
T 3krt_A          331 VFVTRKG-GTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANY---REAWEANRLIAKGRIH--PTLSKVYSLEDTGQA  404 (456)
T ss_dssp             HHHEEEE-EEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSC--CCEEEEEEGGGHHHH
T ss_pred             HHHhhCC-cEEEEEecCCCcccccCHHHHHhcCeEEEEeccCCH---HHHHHHHHHHHcCCcc--cceeEEEcHHHHHHH
Confidence            9999998 999999875542211111234567888988876554   4677899999999774  578899999999999


Q ss_pred             HHHHHcCcc-eEEEEeeC
Q 047713          312 FDLMLAGES-IRCIIRMD  328 (329)
Q Consensus       312 ~~~~~~~~~-~kvvv~~~  328 (329)
                      ++.+.+++. +|+||.+.
T Consensus       405 ~~~l~~~~~~GKvvv~~~  422 (456)
T 3krt_A          405 AYDVHRNLHQGKVGVLCL  422 (456)
T ss_dssp             HHHHHTTCSSSEEEEESS
T ss_pred             HHHHHhCCCCCcEEEEeC
Confidence            999998876 59888764

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=2.9e-44  Score=327.24  Aligned_cols=287  Identities=21%  Similarity=0.385  Sum_probs=233.8

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ..+|.++|||++|+|+++|++|++|++||||++.+. .+|+.|.+|+.|+++.|.+...... |..              
T Consensus        68 ~~~P~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~-~~~--------------  132 (366)
T 1yqd_A           68 SMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYA-SIY--------------  132 (366)
T ss_dssp             CCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSS-SBC--------------
T ss_pred             CCCCEecccceEEEEEEECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCccccccc-ccc--------------
Confidence            467999999999999999999999999999997654 5899999999999999965432110 100              


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCC-CCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPK-KGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~-~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                      ..+...+|+|+||+++|++.++++|++++++++|++++++.|||+++. ..+++ +|++|||+|+|++|++++|+|+..|
T Consensus       133 ~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~al~-~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~G  211 (366)
T 1yqd_A          133 HDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLK-YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFG  211 (366)
T ss_dssp             TTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHHHHHHHHH-HTTCCCTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred             cCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHHHHHHHHH-hcCcCCCCCEEEEECCCHHHHHHHHHHHHCC
Confidence            001123589999999999999999999999999999999999999864 46788 9999999999999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHH-hcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          169 ASRIIGVDLNPSRFNEAK-KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      + +|+++++++++.+.++ ++|++.++++.+.     +.+++++ +++|+|||++|....++.++++++++ |+++.++.
T Consensus       212 a-~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~-----~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~  283 (366)
T 1yqd_A          212 S-KVTVISTSPSKKEEALKNFGADSFLVSRDQ-----EQMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGA  283 (366)
T ss_dssp             C-EEEEEESCGGGHHHHHHTSCCSEEEETTCH-----HHHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEE-EEEEECCC
T ss_pred             C-EEEEEeCCHHHHHHHHHhcCCceEEeccCH-----HHHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEcc
Confidence            9 8999999999988876 8999998877542     2455554 37999999999766788999999998 99999987


Q ss_pred             CCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eEEEEe
Q 047713          248 PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IRCIIR  326 (329)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~kvvv~  326 (329)
                      ......++. ..++.+++++.|+.....   +++.++++++.++++.+.  + ++|||+++++|++.+.+++. +|+||.
T Consensus       284 ~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvl~  356 (366)
T 1yqd_A          284 PEKPLELPA-FSLIAGRKIVAGSGIGGM---KETQEMIDFAAKHNITAD--I-EVISTDYLNTAMERLAKNDVRYRFVID  356 (366)
T ss_dssp             CSSCEEECH-HHHHTTTCEEEECCSCCH---HHHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCCSSEEEEC
T ss_pred             CCCCCCcCH-HHHHhCCcEEEEecCCCH---HHHHHHHHHHHcCCCCCc--e-EEEcHHHHHHHHHHHHcCCcceEEEEE
Confidence            543322211 234568899988765432   568899999999987653  4 69999999999999998875 599997


Q ss_pred             eC
Q 047713          327 MD  328 (329)
Q Consensus       327 ~~  328 (329)
                      ++
T Consensus       357 ~~  358 (366)
T 1yqd_A          357 VG  358 (366)
T ss_dssp             HH
T ss_pred             cc
Confidence            64

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=6.9e-44  Score=333.24  Aligned_cols=287  Identities=16%  Similarity=0.215  Sum_probs=236.7

Q ss_pred             CCC-cccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           12 LFP-RIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        12 ~~P-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .+| .++|||++|+|+++|++|++|++||||++.+...|+.|+. ..+.++.|.+....   |+.               
T Consensus       107 ~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~-~~~~~~~c~~~~~~---G~~---------------  167 (447)
T 4a0s_A          107 DQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPA-THGDGMLGTEQRAW---GFE---------------  167 (447)
T ss_dssp             CCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGG-GGTCTTCSTTCEET---TTT---------------
T ss_pred             CCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccc-cccccccccccccc---ccc---------------
Confidence            466 6999999999999999999999999999999888888874 45778899875542   110               


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhh--ccCCCCCCeEEEEcC-CHHHHHHHHHHHHc
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVN--VAKPKKGQSVAIFGL-GAVGLAAAEGARVS  167 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlI~Ga-g~iG~aai~la~~~  167 (329)
                         ..+|+|+||+++|+++++++|+++++++||++++++.|||+++..  .+++++|++|||+|+ |++|++++|+|+..
T Consensus       168 ---~~~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~  244 (447)
T 4a0s_A          168 ---TNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNG  244 (447)
T ss_dssp             ---SSSCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHT
T ss_pred             ---CCCCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence               114899999999999999999999999999999999999999764  389999999999997 99999999999999


Q ss_pred             CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCC----------------chHHHHHHhhhcCCccEEEEecCCHHHHHHH
Q 047713          168 GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYD----------------KPVQQVIADMTNGGVDRSVECTGSVQAMISA  231 (329)
Q Consensus       168 G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~----------------~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~  231 (329)
                      |+ +|++++.+++++++++++|++.++++.+.+                ..+.+.+++.+++++|+|||++|. ..++.+
T Consensus       245 Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~-~~~~~~  322 (447)
T 4a0s_A          245 GG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR-VTFGLS  322 (447)
T ss_dssp             TC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCH-HHHHHH
T ss_pred             CC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCc-hHHHHH
Confidence            99 788888999999999999999888754322                113667778884499999999987 688999


Q ss_pred             HHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHH
Q 047713          232 FECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKA  311 (329)
Q Consensus       232 ~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a  311 (329)
                      +++++++ |+++.+|.............++.+++++.|+.....   +++.++++++.++++  +++++++|+|+++++|
T Consensus       323 ~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A  396 (447)
T 4a0s_A          323 VIVARRG-GTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANH---EEQQATNRLFESGAV--VPAMSAVYPLAEAAEA  396 (447)
T ss_dssp             HHHSCTT-CEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSS--CCCEEEEEEGGGHHHH
T ss_pred             HHHHhcC-CEEEEEecCCCcccccCHHHHHhCCCEEEecCCCCH---HHHHHHHHHHHcCCc--ccceeEEEcHHHHHHH
Confidence            9999998 999999875442211111234567888988775544   567889999999976  4578899999999999


Q ss_pred             HHHHHcCcc-eEEEEeeC
Q 047713          312 FDLMLAGES-IRCIIRMD  328 (329)
Q Consensus       312 ~~~~~~~~~-~kvvv~~~  328 (329)
                      ++.+.+++. +|+||.+.
T Consensus       397 ~~~~~~~~~~GKvvv~~~  414 (447)
T 4a0s_A          397 CRVVQTSRQVGKVAVLCM  414 (447)
T ss_dssp             HHHHHTTCCSSEEEEESS
T ss_pred             HHHHhcCCCceEEEEEeC
Confidence            999988876 49888764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=2.8e-44  Score=327.53  Aligned_cols=278  Identities=17%  Similarity=0.227  Sum_probs=230.5

Q ss_pred             CcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeec
Q 047713           14 PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHF   93 (329)
Q Consensus        14 P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   93 (329)
                      |.++|||++|+|++  ++ ++|++||||++.+..+|+.|++|++|+++.|++..... .|                   .
T Consensus        61 p~v~G~E~~G~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g-------------------~  117 (366)
T 2cdc_A           61 FLVLGHEAIGVVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGE-AG-------------------I  117 (366)
T ss_dssp             CEECCSEEEEEECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEE-ET-------------------T
T ss_pred             CCcCCcceEEEEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCccc-CC-------------------c
Confidence            99999999999999  77 89999999999999999999999999999998743210 01                   1


Q ss_pred             c-ccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhh--h--ccCCC--C-------CCeEEEEcCCHHHHH
Q 047713           94 V-GTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATV--N--VAKPK--K-------GQSVAIFGLGAVGLA  159 (329)
Q Consensus        94 ~-~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~--~--~~~~~--~-------g~~VlI~Gag~iG~a  159 (329)
                      . .+|+|+||+++|++.++++|++++ ++| +++.++.|||+++.  .  .++++  +       |++|||+|+|++|++
T Consensus       118 ~~~~G~~aey~~v~~~~~~~iP~~l~-~~A-al~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~  195 (366)
T 2cdc_A          118 HKMDGFMREWWYDDPKYLVKIPKSIE-DIG-ILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVL  195 (366)
T ss_dssp             BEECCSCBSEEEECGGGEEEECGGGT-TTG-GGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHH
T ss_pred             cCCCCceeEEEEechHHeEECcCCcc-hhh-hhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHH
Confidence            1 247999999999999999999999 775 57889999999976  4  77888  8       999999999999999


Q ss_pred             HHHHHHHcCCCEEEEEcCCh---hhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHH-HHHHHhh
Q 047713          160 AAEGARVSGASRIIGVDLNP---SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAM-ISAFECV  235 (329)
Q Consensus       160 ai~la~~~G~~~vv~~~~~~---~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~-~~~~~~l  235 (329)
                      ++|+|+..|+ +|+++++++   ++.++++++|++.+ + .+ +  +.+.+++ +++++|+|||++|....+ +.+++++
T Consensus       196 ~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v-~-~~-~--~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l  268 (366)
T 2cdc_A          196 FTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY-N-SS-N--GYDKLKD-SVGKFDVIIDATGADVNILGNVIPLL  268 (366)
T ss_dssp             HHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE-E-CT-T--CSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGE
T ss_pred             HHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee-c-hH-H--HHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHH
Confidence            9999999999 899999988   89999999999888 6 44 3  5566666 546899999999987678 8999999


Q ss_pred             ccCCeEEEEeccCCCC-Cccccccc---cccccceEEEeeecCCCCCCCHHHHHHHHHcCCCC----CCcceeeeeeccc
Q 047713          236 HDGWGVAVLVGVPNKD-DAFKTHPM---NLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELE----VEKFITHTVPFSE  307 (329)
Q Consensus       236 ~~~~G~vv~~g~~~~~-~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~----~~~~~~~~~~l~~  307 (329)
                      +++ |+++.++..... ..++. ..   ++.+++++.|+....   .++++++++++.++++.    ++++++++|+|++
T Consensus       269 ~~~-G~iv~~g~~~~~~~~~~~-~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~  343 (366)
T 2cdc_A          269 GRN-GVLGLFGFSTSGSVPLDY-KTLQEIVHTNKTIIGLVNGQ---KPHFQQAVVHLASWKTLYPKAAKMLITKTVSIND  343 (366)
T ss_dssp             EEE-EEEEECSCCCSCEEEEEH-HHHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTC
T ss_pred             hcC-CEEEEEecCCCCccccCh-hhhHHHHhcCcEEEEecCCC---HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHH
Confidence            998 999999875543 11221 22   457889998876532   25789999999999866    6788889999999


Q ss_pred             HHHHHHH--HHcCcceEEEEeeC
Q 047713          308 INKAFDL--MLAGESIRCIIRMD  328 (329)
Q Consensus       308 i~~a~~~--~~~~~~~kvvv~~~  328 (329)
                      +++|++.  ++.+...|+||+++
T Consensus       344 ~~~A~~~l~~~~~~~gKvvi~~~  366 (366)
T 2cdc_A          344 EKELLKVLREKEHGEIKIRILWE  366 (366)
T ss_dssp             HHHHHHHHHCCCTTCCEEEEECC
T ss_pred             HHHHHHHHhhhcCCceEEEEecC
Confidence            9999999  55444569999874

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=5.9e-42  Score=312.55  Aligned_cols=274  Identities=22%  Similarity=0.246  Sum_probs=224.2

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      .+.+|.++|||++|+|+++|++|+.|++||||+..       |..|..+..                             
T Consensus        59 ~~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~-------~~~~~~~~~-----------------------------  102 (371)
T 3gqv_A           59 FATPWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGA-------QNEMCPRTP-----------------------------  102 (371)
T ss_dssp             -CCTTSCCCSEEEEEEEEECTTCCSCCTTCEEEEE-------CCTTCTTCT-----------------------------
T ss_pred             CCCCCccCccccEEEEEEeCCCCCCCCCCCEEEEe-------ccCCCCCCC-----------------------------
Confidence            45679999999999999999999999999999754       566655421                             


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhc-cCC-----------CCCCeEEEEcC-CHH
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNV-AKP-----------KKGQSVAIFGL-GAV  156 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~-~~~-----------~~g~~VlI~Ga-g~i  156 (329)
                           .+|+|+||+++|++.++++|+++++++||++++++.|||+++... .++           ++|++|||+|+ |++
T Consensus       103 -----~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~v  177 (371)
T 3gqv_A          103 -----DQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTAT  177 (371)
T ss_dssp             -----TCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHH
T ss_pred             -----CCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHH
Confidence                 247999999999999999999999999999999999999998776 553           89999999987 999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhh-
Q 047713          157 GLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECV-  235 (329)
Q Consensus       157 G~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l-  235 (329)
                      |++++|+|+..|+ +|+++. +++++++++++|+++++++.+.+  +.+.+++++++++|+|||++|.+..++.+++++ 
T Consensus       178 G~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~--~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~  253 (371)
T 3gqv_A          178 ATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGAEEVFDYRAPN--LAQTIRTYTKNNLRYALDCITNVESTTFCFAAIG  253 (371)
T ss_dssp             HHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTSTT--HHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCCcEEEECCCch--HHHHHHHHccCCccEEEECCCchHHHHHHHHHhh
Confidence            9999999999999 788885 78999999999999999988766  899999999888999999999988899999999 


Q ss_pred             ccCCeEEEEeccCCCC----Cccc----cccccccccceEEEeeecCCCCC------CCHHHHHHHHHcCCCCCCcceee
Q 047713          236 HDGWGVAVLVGVPNKD----DAFK----THPMNLLNERTLKGTFFGNYKPR------SDLPSVVEKYMNKELEVEKFITH  301 (329)
Q Consensus       236 ~~~~G~vv~~g~~~~~----~~~~----~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~i~~~~~~~l~~~~~~~~  301 (329)
                      +++ |+++.+|.....    ....    ....++.+++++.|+........      +.++++++++.+|++.+.+.++.
T Consensus       254 ~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  332 (371)
T 3gqv_A          254 RAG-GHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVV  332 (371)
T ss_dssp             TTC-EEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEE
T ss_pred             cCC-CEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeec
Confidence            587 999999854321    1111    11234457777776543322110      11347889999999998888888


Q ss_pred             eeecccHHHHHHHHHcCcc--eEEEEeeCC
Q 047713          302 TVPFSEINKAFDLMLAGES--IRCIIRMDG  329 (329)
Q Consensus       302 ~~~l~~i~~a~~~~~~~~~--~kvvv~~~~  329 (329)
                      .|+|+++++|++.+.+++.  .|+|+.+++
T Consensus       333 ~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~  362 (371)
T 3gqv_A          333 QGGFDHIKQGMELVRKGELSGEKLVVRLEG  362 (371)
T ss_dssp             EECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred             CCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence            8999999999999998874  377777654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.2e-41  Score=308.46  Aligned_cols=262  Identities=19%  Similarity=0.250  Sum_probs=224.4

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      .+.+|.++|||++|+|+++|++|++|++||||+...                                            
T Consensus        82 ~~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~--------------------------------------------  117 (353)
T 4dup_A           82 PKDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLA--------------------------------------------  117 (353)
T ss_dssp             CTTSCSSSCCEEEEEEEEECTTCCSCCTTCEEEEEC--------------------------------------------
T ss_pred             CCCCCCccccccEEEEEEECCCCCCCCCCCEEEEec--------------------------------------------
Confidence            346799999999999999999999999999998642                                            


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEc-CCHHHHHHHHHHHHcC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G-ag~iG~aai~la~~~G  168 (329)
                           .+|+|+||+++|++.++++|++++++++|++++++.|||+++.+.+++++|++|||+| +|++|++++|+|+..|
T Consensus       118 -----~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~G  192 (353)
T 4dup_A          118 -----NGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFG  192 (353)
T ss_dssp             -----SSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTT
T ss_pred             -----CCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence                 1379999999999999999999999999999999999999988899999999999995 5999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      + +|+++++++++.++++++|++.++++.+.+  +.+.+++.+++++|+|||++|. +.++.++++++++ |+++.+|..
T Consensus       193 a-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~--~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~g~~  267 (353)
T 4dup_A          193 A-EVYATAGSTGKCEACERLGAKRGINYRSED--FAAVIKAETGQGVDIILDMIGA-AYFERNIASLAKD-GCLSIIAFL  267 (353)
T ss_dssp             C-EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHHSSCEEEEEESCCG-GGHHHHHHTEEEE-EEEEECCCT
T ss_pred             C-EEEEEeCCHHHHHHHHhcCCCEEEeCCchH--HHHHHHHHhCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEEec
Confidence            9 899999999999999999999999887766  8888888884499999999987 5889999999998 999999875


Q ss_pred             CCCCcc-ccccccccccceEEEeeecCCCCCC-------CHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc
Q 047713          249 NKDDAF-KTHPMNLLNERTLKGTFFGNYKPRS-------DLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES  320 (329)
Q Consensus       249 ~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~  320 (329)
                      ...... .....++.+++++.|+....+...+       .++++++++.++++  +++++++|+++++++|++.+++++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~l~~~~~  345 (353)
T 4dup_A          268 GGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTV--APVIHKVFAFEDVADAHRLLEEGSH  345 (353)
T ss_dssp             TCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSS--CCCEEEEEEGGGHHHHHHHHHHTCC
T ss_pred             CCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCc--cCCcceEEeHHHHHHHHHHHHhCCC
Confidence            543221 1112345688999998765542110       16778999999976  4678899999999999999998876


Q ss_pred             -eEEEEee
Q 047713          321 -IRCIIRM  327 (329)
Q Consensus       321 -~kvvv~~  327 (329)
                       +|+||++
T Consensus       346 ~gKvvl~~  353 (353)
T 4dup_A          346 VGKVMLTV  353 (353)
T ss_dssp             SSEEEEEC
T ss_pred             CceEEEeC
Confidence             4999874

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=4.9e-41  Score=302.51  Aligned_cols=262  Identities=23%  Similarity=0.299  Sum_probs=224.9

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .++|.++|||++|+|+++|++|++|++||||++..                                             
T Consensus        61 ~~~P~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~---------------------------------------------   95 (334)
T 3qwb_A           61 CEKPYVLGREASGTVVAKGKGVTNFEVGDQVAYIS---------------------------------------------   95 (334)
T ss_dssp             CCSSEECCSEEEEEEEEECTTCCSCCTTCEEEEEC---------------------------------------------
T ss_pred             CCCCCccccceEEEEEEECCCCCCCCCCCEEEEee---------------------------------------------
Confidence            36799999999999999999999999999998641                                             


Q ss_pred             eeccccccccccEEee-eccEEEcCCCCCccc---hhcccccccchhhhhhhccCCCCCCeEEEEc-CCHHHHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTH-VGCVAKINPAAPLDK---VCVLSCGISTGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGAR  165 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~-~~~~~~~p~~~~~~~---aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G-ag~iG~aai~la~  165 (329)
                           +|+|+||+++| ++.++++|+++++++   +|++++++.|||+++.+..++++|++|||+| +|++|++++|+|+
T Consensus        96 -----~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~  170 (334)
T 3qwb_A           96 -----NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLK  170 (334)
T ss_dssp             -----SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHH
T ss_pred             -----CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHH
Confidence                 37999999999 999999999999999   8889999999999988888999999999998 5999999999999


Q ss_pred             HcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEE
Q 047713          166 VSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       166 ~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~  244 (329)
                      ..|+ +|++++++++++++++++|++.++++.+.+  +.+.+++.+++ ++|+|||++|. ..++.++++++++ |+++.
T Consensus       171 ~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~--~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~  245 (334)
T 3qwb_A          171 MKGA-HTIAVASTDEKLKIAKEYGAEYLINASKED--ILRQVLKFTNGKGVDASFDSVGK-DTFEISLAALKRK-GVFVS  245 (334)
T ss_dssp             HTTC-EEEEEESSHHHHHHHHHTTCSEEEETTTSC--HHHHHHHHTTTSCEEEEEECCGG-GGHHHHHHHEEEE-EEEEE
T ss_pred             HCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCCch--HHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhccC-CEEEE
Confidence            9999 899999999999999999999999887766  88899998877 99999999987 7889999999998 99999


Q ss_pred             eccCCCCCccccccccccccceEEEeeecCCCCC-C----CHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc
Q 047713          245 VGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPR-S----DLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE  319 (329)
Q Consensus       245 ~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~----~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~  319 (329)
                      +|.............++.+++++.+.....+... +    .++++++++.++++.+.  ++++|+++++++|++.+.+++
T Consensus       246 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~  323 (334)
T 3qwb_A          246 FGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK--IYKTYPLRDYRTAAADIESRK  323 (334)
T ss_dssp             CCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHTTC
T ss_pred             EcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCc--eeeEEcHHHHHHHHHHHHhCC
Confidence            9976543211112334568888887665443221 1    24688999999987654  789999999999999999887


Q ss_pred             c-eEEEEeeCC
Q 047713          320 S-IRCIIRMDG  329 (329)
Q Consensus       320 ~-~kvvv~~~~  329 (329)
                      . +|+||++++
T Consensus       324 ~~gKvvi~~~q  334 (334)
T 3qwb_A          324 TVGKLVLEIPQ  334 (334)
T ss_dssp             CCBEEEEECCC
T ss_pred             CceEEEEecCC
Confidence            6 599999864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=5.9e-41  Score=302.74  Aligned_cols=257  Identities=21%  Similarity=0.268  Sum_probs=216.8

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++|+ |++||||++..                                             
T Consensus        76 ~~~p~v~G~E~~G~V~~vG~~v~-~~vGDrV~~~~---------------------------------------------  109 (342)
T 4eye_A           76 MEPPFVPGIETAGVVRSAPEGSG-IKPGDRVMAFN---------------------------------------------  109 (342)
T ss_dssp             CCSSBCCCSEEEEEEEECCTTSS-CCTTCEEEEEC---------------------------------------------
T ss_pred             CCCCCccceeEEEEEEEECCCCC-CCCCCEEEEec---------------------------------------------
Confidence            47899999999999999999999 99999999652                                             


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                          .+|+|+||+++|++.++++|++++++++|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+
T Consensus       110 ----~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga  185 (342)
T 4eye_A          110 ----FIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA  185 (342)
T ss_dssp             ----SSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC
T ss_pred             ----CCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence                13799999999999999999999999999999999999999888999999999999987 9999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|+++++++++.++++++|++.++++. .+  +.+.+++.+++ ++|+|||++|. +.+..++++++++ |+++.+|..
T Consensus       186 -~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~--~~~~v~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~G~~  259 (342)
T 4eye_A          186 -KVIAVVNRTAATEFVKSVGADIVLPLE-EG--WAKAVREATGGAGVDMVVDPIGG-PAFDDAVRTLASE-GRLLVVGFA  259 (342)
T ss_dssp             -EEEEEESSGGGHHHHHHHTCSEEEESS-TT--HHHHHHHHTTTSCEEEEEESCC---CHHHHHHTEEEE-EEEEEC---
T ss_pred             -EEEEEeCCHHHHHHHHhcCCcEEecCc-hh--HHHHHHHHhCCCCceEEEECCch-hHHHHHHHhhcCC-CEEEEEEcc
Confidence             899999999999999999999998877 44  88899999888 99999999987 5889999999998 999999865


Q ss_pred             CCCCccccccccccccceEEEeeecCCCC------CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKP------RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-  321 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-  321 (329)
                      ...........++.+++++.|+..+.+..      .+.++++++++.++   ++++++++|+|+++++|++.+.+++.. 
T Consensus       260 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g---l~~~i~~~~~l~~~~~A~~~~~~~~~~g  336 (342)
T 4eye_A          260 AGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG---MRPPVSARIPLSEGRQALQDFADGKVYG  336 (342)
T ss_dssp             -------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT---CCCCEEEEEEGGGHHHHHHHHHTTCCCS
T ss_pred             CCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC---CCCCcceEEeHHHHHHHHHHHHhCCCCc
Confidence            54321111233467899999887643310      13477899999998   456788999999999999999998864 


Q ss_pred             EEEEe
Q 047713          322 RCIIR  326 (329)
Q Consensus       322 kvvv~  326 (329)
                      |+||+
T Consensus       337 Kvvl~  341 (342)
T 4eye_A          337 KMVLV  341 (342)
T ss_dssp             EEEEE
T ss_pred             eEEEe
Confidence            88886

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=2.3e-40  Score=299.41  Aligned_cols=265  Identities=18%  Similarity=0.173  Sum_probs=220.6

Q ss_pred             CCCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCC
Q 047713            8 GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKG   87 (329)
Q Consensus         8 ~~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   87 (329)
                      +..+.+|.++|||++|+|+++|++|++|++||||+....                                         
T Consensus        54 g~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~-----------------------------------------   92 (346)
T 3fbg_A           54 MDVSKAPRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGS-----------------------------------------   92 (346)
T ss_dssp             SCCSSSCBCCCCCEEEEEEEECTTCCSCCTTCEEEECCC-----------------------------------------
T ss_pred             CCCCCCCcCcCCccEEEEEEeCCCCCcCCCCCEEEEcCC-----------------------------------------
Confidence            335678999999999999999999999999999986421                                         


Q ss_pred             CceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCC------CCCeEEEEc-CCHHHHHH
Q 047713           88 KPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPK------KGQSVAIFG-LGAVGLAA  160 (329)
Q Consensus        88 ~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~------~g~~VlI~G-ag~iG~aa  160 (329)
                           ...+|+|+||+++|++.++++|+++++++||++++++.|||+++.+.++++      +|++|||+| +|++|+++
T Consensus        93 -----~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a  167 (346)
T 3fbg_A           93 -----PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIA  167 (346)
T ss_dssp             -----TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHH
T ss_pred             -----CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHH
Confidence                 112479999999999999999999999999999999999999988889998      999999995 69999999


Q ss_pred             HHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCe
Q 047713          161 AEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWG  240 (329)
Q Consensus       161 i~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G  240 (329)
                      +|+|+..|+ +|+++++++++.++++++|++.++++.+ +  +.+.+++..++++|+|||++|.+..++.++++++++ |
T Consensus       168 ~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~--~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G  242 (346)
T 3fbg_A          168 TQIAKAYGL-RVITTASRNETIEWTKKMGADIVLNHKE-S--LLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPR-G  242 (346)
T ss_dssp             HHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTTS-C--HHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEE-E
T ss_pred             HHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECCc-c--HHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccC-C
Confidence            999999999 8999999999999999999999998864 3  778888884449999999999877889999999998 9


Q ss_pred             EEEEeccCCCCCccccccccccccceEEEeeecCCCC---------CCCHHHHHHHHHcCCCCCCcceeeee---ecccH
Q 047713          241 VAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKP---------RSDLPSVVEKYMNKELEVEKFITHTV---PFSEI  308 (329)
Q Consensus       241 ~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---------~~~~~~~i~~~~~~~l~~~~~~~~~~---~l~~i  308 (329)
                      +++.++....  ..+. ..+..+++++.+........         .+.++++++++.++++.  +.++++|   +++++
T Consensus       243 ~iv~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~~~l~~~  317 (346)
T 3fbg_A          243 HIATIVAFEN--DQDL-NALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQ--PTTTKVIEGLTTENI  317 (346)
T ss_dssp             EEEESSCCSS--CBCG-GGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSC--CCEEEEEESCCHHHH
T ss_pred             EEEEECCCCC--CCcc-ccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEE--CCccceecCCCHHHH
Confidence            9998875322  1222 23345788888765432110         13477899999999764  5567777   99999


Q ss_pred             HHHHHHHHcCcc-eEEEEeeC
Q 047713          309 NKAFDLMLAGES-IRCIIRMD  328 (329)
Q Consensus       309 ~~a~~~~~~~~~-~kvvv~~~  328 (329)
                      ++|++.+.+++. +|+||+++
T Consensus       318 ~~A~~~~~~g~~~GKvvl~~~  338 (346)
T 3fbg_A          318 YQAHQILESNTMIGKLVINLN  338 (346)
T ss_dssp             HHHHHHHHTTCCCSEEEEEC-
T ss_pred             HHHHHHHhcCCcceEEEEecC
Confidence            999999999886 59999875

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.6e-40  Score=297.99  Aligned_cols=260  Identities=20%  Similarity=0.274  Sum_probs=219.0

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++|++|++||||+..+.                                            
T Consensus        55 ~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~--------------------------------------------   90 (325)
T 3jyn_A           55 PFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTG--------------------------------------------   90 (325)
T ss_dssp             SSSSBCCCCCEEEEEEEECTTCCSCCTTCEEEESSS--------------------------------------------
T ss_pred             CCCCCCCCceeEEEEEEECCCCCCCCCCCEEEEecC--------------------------------------------
Confidence            468999999999999999999999999999986421                                            


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEc-CCHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G-ag~iG~aai~la~~~G~  169 (329)
                          .+|+|+||+++|++.++++|++++++++|++++.+.|+|+++.+.+++++|++|||+| +|++|++++|+|+..|+
T Consensus        91 ----~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga  166 (325)
T 3jyn_A           91 ----PLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA  166 (325)
T ss_dssp             ----SSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC
T ss_pred             ----CCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC
Confidence                1479999999999999999999999999999999999999988889999999999998 59999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|+++++++++.++++++|++.++++.+.+  +.+.+++.+++ ++|+|||++|. +.+..++++++++ |+++.+|..
T Consensus       167 -~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~--~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~g~~  241 (325)
T 3jyn_A          167 -KLIGTVSSPEKAAHAKALGAWETIDYSHED--VAKRVLELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPR-GLVVSFGNA  241 (325)
T ss_dssp             -EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTCCEEEEEESSCG-GGHHHHHTTEEEE-EEEEECCCT
T ss_pred             -EEEEEeCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhcCC-CEEEEEecC
Confidence             899999999999999999999999887766  88899999887 99999999987 6889999999998 999999976


Q ss_pred             CCCC-ccccccccccc-cceEEEeeecCCC-CCCC----HHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce
Q 047713          249 NKDD-AFKTHPMNLLN-ERTLKGTFFGNYK-PRSD----LPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI  321 (329)
Q Consensus       249 ~~~~-~~~~~~~~~~~-~~~~~g~~~~~~~-~~~~----~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~  321 (329)
                      .... .++. ..+..+ ++.+.+..+..+. ..++    ++++++++.++++.+.  ++++|+++++++|++.+.+++..
T Consensus       242 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~  318 (325)
T 3jyn_A          242 SGPVSGVNL-GILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVD--GIEQYALKDAAKAQIELSARRTT  318 (325)
T ss_dssp             TCCCCSCCT-HHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCC--CCEEEEGGGHHHHHHHHHTTCCC
T ss_pred             CCCCCCCCH-HHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCc--cccEEcHHHHHHHHHHHHcCCCC
Confidence            5432 1221 122333 4555544333221 1233    3478999999988664  67999999999999999998864


Q ss_pred             -EEEEe
Q 047713          322 -RCIIR  326 (329)
Q Consensus       322 -kvvv~  326 (329)
                       |+||.
T Consensus       319 Gkvvl~  324 (325)
T 3jyn_A          319 GSTILI  324 (325)
T ss_dssp             SCEEEE
T ss_pred             ceEEEe
Confidence             88875

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=8.2e-41  Score=301.73  Aligned_cols=263  Identities=18%  Similarity=0.232  Sum_probs=217.9

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++|++|++||||+...                                             
T Consensus        60 ~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~---------------------------------------------   94 (340)
T 3gms_A           60 IPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLR---------------------------------------------   94 (340)
T ss_dssp             SCSSBCCCSCCEEEEEEECTTSCGGGTTCEEEECS---------------------------------------------
T ss_pred             CCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEecC---------------------------------------------
Confidence            47899999999999999999999999999998531                                             


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                          .+|+|+||+++|++.++++|+++++++||++++.+.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+
T Consensus        95 ----~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga  170 (340)
T 3gms_A           95 ----GEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF  170 (340)
T ss_dssp             ----SSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC
T ss_pred             ----CCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC
Confidence                14799999999999999999999999999999999999999889999999999999987 6999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|+++++++++.++++++|++.++++.+.+  +.+.+++.+++ ++|+|||++|.+ .....+++++++ |+++.+|..
T Consensus       171 -~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~--~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~-G~iv~~G~~  245 (340)
T 3gms_A          171 -RLIAVTRNNKHTEELLRLGAAYVIDTSTAP--LYETVMELTNGIGADAAIDSIGGP-DGNELAFSLRPN-GHFLTIGLL  245 (340)
T ss_dssp             -EEEEEESSSTTHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTSCEEEEEESSCHH-HHHHHHHTEEEE-EEEEECCCT
T ss_pred             -EEEEEeCCHHHHHHHHhCCCcEEEeCCccc--HHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHHhcCC-CEEEEEeec
Confidence             899999999999999999999999887766  88899999888 999999999875 445667999998 999999875


Q ss_pred             CCCCccccccccccccceEEEeeecCC-------CCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc-c
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNY-------KPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE-S  320 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~-------~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~-~  320 (329)
                      .... .+........++.+....+..+       ...++++++++++.++++.+.. ++++|+|+++++|++.+.+++ .
T Consensus       246 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~~~A~~~~~~~~~~  323 (340)
T 3gms_A          246 SGIQ-VNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVVQSAEKT  323 (340)
T ss_dssp             TSCC-CCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEGGGHHHHHHHHHCTTCC
T ss_pred             CCCC-CCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc-ccEEEeHHHHHHHHHHHHhcCCC
Confidence            4321 1111111112334333322111       0124688999999999887754 679999999999999999987 4


Q ss_pred             -eEEEEeeCC
Q 047713          321 -IRCIIRMDG  329 (329)
Q Consensus       321 -~kvvv~~~~  329 (329)
                       +|++|++.+
T Consensus       324 ~GKvvl~~~~  333 (340)
T 3gms_A          324 KGKVFLTSYE  333 (340)
T ss_dssp             SSEEEEECC-
T ss_pred             CCeEEEEEec
Confidence             699998753

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=2.7e-40  Score=299.79  Aligned_cols=264  Identities=20%  Similarity=0.294  Sum_probs=218.6

Q ss_pred             CCCCcccCCcceEEEEEecCCC-CcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGV-TDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      +.+|.++|||++|+|+++|++| +.|++||||++..                                            
T Consensus        77 ~~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~--------------------------------------------  112 (354)
T 2j8z_A           77 PGASNILGLEASGHVAELGPGCQGHWKIGDTAMALL--------------------------------------------  112 (354)
T ss_dssp             TTSCSSSCSEEEEEEEEECSCC--CCCTTCEEEEEC--------------------------------------------
T ss_pred             CCCCcccceeeEEEEEEECCCcCCCCCCCCEEEEec--------------------------------------------
Confidence            3578999999999999999999 9999999998642                                            


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G  168 (329)
                           ..|+|+||+++|++.++++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|
T Consensus       113 -----~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G  187 (354)
T 2j8z_A          113 -----PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG  187 (354)
T ss_dssp             -----SSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT
T ss_pred             -----CCCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcC
Confidence                 13799999999999999999999999999999999999999888899999999999985 999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      + +|+++++++++.+.++++|++.++++.+.+  +.+.+.+.+.+ ++|++||++|.. .+..++++++++ |+++.+|.
T Consensus       188 a-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~-G~iv~~G~  262 (354)
T 2j8z_A          188 A-IPLVTAGSQKKLQMAEKLGAAAGFNYKKED--FSEATLKFTKGAGVNLILDCIGGS-YWEKNVNCLALD-GRWVLYGL  262 (354)
T ss_dssp             C-EEEEEESCHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTSCEEEEEESSCGG-GHHHHHHHEEEE-EEEEECCC
T ss_pred             C-EEEEEeCCHHHHHHHHHcCCcEEEecCChH--HHHHHHHHhcCCCceEEEECCCch-HHHHHHHhccCC-CEEEEEec
Confidence            9 899999999999999999999988877655  88888888776 899999999875 888999999998 99999987


Q ss_pred             CCCCCccccc--cccccccceEEEeeecCCCCCC------C-HHHHHHHHHcC-CCCCCcceeeeeecccHHHHHHHHHc
Q 047713          248 PNKDDAFKTH--PMNLLNERTLKGTFFGNYKPRS------D-LPSVVEKYMNK-ELEVEKFITHTVPFSEINKAFDLMLA  317 (329)
Q Consensus       248 ~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~------~-~~~~i~~~~~~-~l~~~~~~~~~~~l~~i~~a~~~~~~  317 (329)
                      ..... ..+.  ..++.+++++.|+.........      . ++++++++.++ ++.++++++++|+|+++++|++.+.+
T Consensus       263 ~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~  341 (354)
T 2j8z_A          263 MGGGD-INGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEA  341 (354)
T ss_dssp             TTCSC-CCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHT
T ss_pred             cCCCc-cCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHh
Confidence            54321 1222  2345688999987654331100      1 23477788888 44456778899999999999999988


Q ss_pred             Ccc-eEEEEeeCC
Q 047713          318 GES-IRCIIRMDG  329 (329)
Q Consensus       318 ~~~-~kvvv~~~~  329 (329)
                      ++. +|+||++++
T Consensus       342 ~~~~gKvvv~~~~  354 (354)
T 2j8z_A          342 NKNIGKIVLELPQ  354 (354)
T ss_dssp             TCCSSEEEEECCC
T ss_pred             CCCCceEEEecCC
Confidence            765 599998763

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=3.4e-40  Score=296.90  Aligned_cols=264  Identities=21%  Similarity=0.270  Sum_probs=221.0

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++|++|++||||+..+.                                            
T Consensus        58 ~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~--------------------------------------------   93 (333)
T 1wly_A           58 GEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLP--------------------------------------------   93 (333)
T ss_dssp             --CCEECCCEEEEEEEEECTTCCSCCTTCEEEECSS--------------------------------------------
T ss_pred             CCCCccccceeEEEEEEECCCCCCCCCCCEEEEecC--------------------------------------------
Confidence            457999999999999999999999999999975421                                            


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccc--hhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHc
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDK--VCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVS  167 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~--aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~  167 (329)
                          ..|+|+||+++|++.++++|+++++++  +|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..
T Consensus        94 ----~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~  169 (333)
T 1wly_A           94 ----PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHL  169 (333)
T ss_dssp             ----SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHT
T ss_pred             ----CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHC
Confidence                037999999999999999999999999  99999999999999877889999999999986 99999999999999


Q ss_pred             CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          168 GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       168 G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+ +|+++++++++.+.++++|++.+++..+.+  +.+.+.+.+.+ ++|++||++|. ..++.++++++++ |+++.+|
T Consensus       170 G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~--~~~~i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~g  244 (333)
T 1wly_A          170 GA-TVIGTVSTEEKAETARKLGCHHTINYSTQD--FAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPR-GMCAAYG  244 (333)
T ss_dssp             TC-EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEE-EEEEECC
T ss_pred             CC-EEEEEeCCHHHHHHHHHcCCCEEEECCCHH--HHHHHHHHhCCCCCeEEEECCcH-HHHHHHHHhhccC-CEEEEEe
Confidence            99 899999999999999999999888877655  77888888766 89999999987 7889999999998 9999998


Q ss_pred             cCCCC-Ccccccccccccc--ceEEEeeecCCCC----CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc
Q 047713          247 VPNKD-DAFKTHPMNLLNE--RTLKGTFFGNYKP----RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE  319 (329)
Q Consensus       247 ~~~~~-~~~~~~~~~~~~~--~~~~g~~~~~~~~----~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~  319 (329)
                      ..... ..++....++.++  +++.|+....+..    .+.++++++++.++++.  ++++++|+|+++++|++.+.+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~  322 (333)
T 1wly_A          245 HASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLH--SSVAKTFPLREAAAAHKYMGGRQ  322 (333)
T ss_dssp             CTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHHCS
T ss_pred             cCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcC--CCcceEEeHHHHHHHHHHHHcCC
Confidence            75432 1222111345677  8888765422111    12578899999999764  56889999999999999998876


Q ss_pred             c-eEEEEeeCC
Q 047713          320 S-IRCIIRMDG  329 (329)
Q Consensus       320 ~-~kvvv~~~~  329 (329)
                      . .|+|+.+++
T Consensus       323 ~~gKvvi~~~~  333 (333)
T 1wly_A          323 TIGSIVLLPQA  333 (333)
T ss_dssp             CCSEEEEETTC
T ss_pred             CceEEEEEeCC
Confidence            5 599998765

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.1e-40  Score=301.85  Aligned_cols=262  Identities=20%  Similarity=0.291  Sum_probs=210.8

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      .+.+|.++|||++|+|+++|++|++|++||||+...                                            
T Consensus        57 ~~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~--------------------------------------------   92 (349)
T 4a27_A           57 PPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFV--------------------------------------------   92 (349)
T ss_dssp             CCCSSBCCCSEEEEEEEEECTTCCSCCTTCEEEEEC--------------------------------------------
T ss_pred             CCCCCccccceeEEEEEEeCCCCCCCCCCCEEEEec--------------------------------------------
Confidence            457899999999999999999999999999998652                                            


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G  168 (329)
                           .+|+|+||+++|++.++++|++++++++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|
T Consensus        93 -----~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g  167 (349)
T 4a27_A           93 -----NYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVP  167 (349)
T ss_dssp             -----SSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTST
T ss_pred             -----CCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC
Confidence                 13799999999999999999999999999999999999999888899999999999987 999999999999986


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      ..+|++++ ++++.+.++ +|++++++ .+.+  +.+.+++++++++|+|||++|.+ .++.++++++++ |+++.+|..
T Consensus       168 ~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~~~--~~~~~~~~~~~g~Dvv~d~~g~~-~~~~~~~~l~~~-G~~v~~G~~  240 (349)
T 4a27_A          168 NVTVFGTA-STFKHEAIK-DSVTHLFD-RNAD--YVQEVKRISAEGVDIVLDCLCGD-NTGKGLSLLKPL-GTYILYGSS  240 (349)
T ss_dssp             TCEEEEEE-CGGGHHHHG-GGSSEEEE-TTSC--HHHHHHHHCTTCEEEEEEECC--------CTTEEEE-EEEEEEC--
T ss_pred             CcEEEEeC-CHHHHHHHH-cCCcEEEc-CCcc--HHHHHHHhcCCCceEEEECCCch-hHHHHHHHhhcC-CEEEEECCC
Confidence            55888887 667888888 99999998 5544  88889888766999999999874 558999999998 999999864


Q ss_pred             CCCCc---------------cccc-cccccccceEEEeeecCCCC--------CCCHHHHHHHHHcCCCCCCcceeeeee
Q 047713          249 NKDDA---------------FKTH-PMNLLNERTLKGTFFGNYKP--------RSDLPSVVEKYMNKELEVEKFITHTVP  304 (329)
Q Consensus       249 ~~~~~---------------~~~~-~~~~~~~~~~~g~~~~~~~~--------~~~~~~~i~~~~~~~l~~~~~~~~~~~  304 (329)
                      .....               .... ..++.++.++.++....+..        .++++++++++.++++  +++++++|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~  318 (349)
T 4a27_A          241 NMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKI--KPVVDSLWA  318 (349)
T ss_dssp             -----------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSC--CCCEEEEEC
T ss_pred             cccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCc--cccccceEC
Confidence            32110               0011 22345778888876532111        2468899999999977  467889999


Q ss_pred             cccHHHHHHHHHcCcc-eEEEEeeCC
Q 047713          305 FSEINKAFDLMLAGES-IRCIIRMDG  329 (329)
Q Consensus       305 l~~i~~a~~~~~~~~~-~kvvv~~~~  329 (329)
                      |+++++|++.+.+++. +|+||++++
T Consensus       319 l~~~~~A~~~l~~~~~~GKvvi~~~~  344 (349)
T 4a27_A          319 LEEVKEAMQRIHDRGNIGKLILDVEK  344 (349)
T ss_dssp             GGGHHHHHHHHHTTCCSSEEEEETTC
T ss_pred             HHHHHHHHHHHHhCCCCceEEEecCC
Confidence            9999999999998876 499998764

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=8.9e-40  Score=297.21  Aligned_cols=262  Identities=18%  Similarity=0.215  Sum_probs=218.2

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++|++|++||||+..+.                                            
T Consensus        79 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~--------------------------------------------  114 (363)
T 4dvj_A           79 GTDWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGS--------------------------------------------  114 (363)
T ss_dssp             -CCSBCCCCCEEEEEEEECTTCCSCCTTCEEEECCC--------------------------------------------
T ss_pred             CCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEccC--------------------------------------------
Confidence            468999999999999999999999999999986421                                            


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCC-----CCCeEEEEc-CCHHHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPK-----KGQSVAIFG-LGAVGLAAAEGA  164 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~-----~g~~VlI~G-ag~iG~aai~la  164 (329)
                        ...+|+|+||+++|++.++++|+++++++||++++++.|||+++.+..+++     +|++|||+| +|++|++++|+|
T Consensus       115 --~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla  192 (363)
T 4dvj_A          115 --IIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIA  192 (363)
T ss_dssp             --TTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHH
T ss_pred             --CCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHH
Confidence              112479999999999999999999999999999999999999988888888     899999998 599999999999


Q ss_pred             HHc-CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEE
Q 047713          165 RVS-GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAV  243 (329)
Q Consensus       165 ~~~-G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv  243 (329)
                      +.+ |+ +|+++++++++.++++++|++.++++.+ +  +.+.++++.++++|+|||++|.+..++.++++++++ |+++
T Consensus       193 k~~~g~-~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~--~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv  267 (363)
T 4dvj_A          193 RQRTDL-TVIATASRPETQEWVKSLGAHHVIDHSK-P--LAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRFC  267 (363)
T ss_dssp             HHHCCS-EEEEECSSHHHHHHHHHTTCSEEECTTS-C--HHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTT-CEEE
T ss_pred             HHhcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC-C--HHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCC-CEEE
Confidence            984 77 9999999999999999999999998865 3  788888885459999999999877899999999998 9999


Q ss_pred             EeccCCCCCccccccccccccceEEEeeecCC-----CC----CCCHHHHHHHHHcCCCCCCcceeeee---ecccHHHH
Q 047713          244 LVGVPNKDDAFKTHPMNLLNERTLKGTFFGNY-----KP----RSDLPSVVEKYMNKELEVEKFITHTV---PFSEINKA  311 (329)
Q Consensus       244 ~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~----~~~~~~~i~~~~~~~l~~~~~~~~~~---~l~~i~~a  311 (329)
                      .++...   ..+. ..+..+++++.++.....     .+    .+.++++++++.++++.  +.+++++   +++++++|
T Consensus       268 ~~g~~~---~~~~-~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~~~l~~~~~A  341 (363)
T 4dvj_A          268 LIDDPS---AFDI-MLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLR--TTLTNRLSPINAANLKQA  341 (363)
T ss_dssp             ECSCCS---SCCG-GGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSC--CCEEEEECSCSHHHHHHH
T ss_pred             EECCCC---ccch-HHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCee--ccccceecCCCHHHHHHH
Confidence            996421   2222 234567888887654321     00    13477899999999775  4566665   99999999


Q ss_pred             HHHHHcCcc-eEEEEeeCC
Q 047713          312 FDLMLAGES-IRCIIRMDG  329 (329)
Q Consensus       312 ~~~~~~~~~-~kvvv~~~~  329 (329)
                      ++.+.+++. +|+||++.+
T Consensus       342 ~~~~~~~~~~GKvVl~~~~  360 (363)
T 4dvj_A          342 HALVESGTARGKVVIEGFG  360 (363)
T ss_dssp             HHHHHHTCCCSEEEEECSC
T ss_pred             HHHHHhCCCceEEEEeCcc
Confidence            999998886 499998753

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=7.1e-40  Score=295.81  Aligned_cols=260  Identities=22%  Similarity=0.263  Sum_probs=217.3

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++|++|++||||++...           +.                               
T Consensus        61 ~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~-----------g~-------------------------------   98 (343)
T 3gaz_A           61 QPLPAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTG-----------GV-------------------------------   98 (343)
T ss_dssp             CCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECC-----------SS-------------------------------
T ss_pred             CCCCcccCcceEEEEEEECCCCCCCCCCCEEEEEeC-----------CC-------------------------------
Confidence            568999999999999999999999999999986321           10                               


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEc-CCHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G-ag~iG~aai~la~~~G~  169 (329)
                        ...+|+|+||+++|++.++++|++++++++|++++++.|||+++.+.+++++|++|||+| +|++|++++|+|+..|+
T Consensus        99 --~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga  176 (343)
T 3gaz_A           99 --GGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA  176 (343)
T ss_dssp             --TTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred             --CCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC
Confidence              002479999999999999999999999999999999999999988899999999999998 59999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|+++ .++++.++++++|++. ++ .+.+  +.+.+++.+++ ++|+|||++|. +.+..++++++++ |+++.++..
T Consensus       177 -~Vi~~-~~~~~~~~~~~lGa~~-i~-~~~~--~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~  248 (343)
T 3gaz_A          177 -RVFAT-ARGSDLEYVRDLGATP-ID-ASRE--PEDYAAEHTAGQGFDLVYDTLGG-PVLDASFSAVKRF-GHVVSCLGW  248 (343)
T ss_dssp             -EEEEE-ECHHHHHHHHHHTSEE-EE-TTSC--HHHHHHHHHTTSCEEEEEESSCT-HHHHHHHHHEEEE-EEEEESCCC
T ss_pred             -EEEEE-eCHHHHHHHHHcCCCE-ec-cCCC--HHHHHHHHhcCCCceEEEECCCc-HHHHHHHHHHhcC-CeEEEEccc
Confidence             88888 8899999999999988 66 4444  88888888887 99999999986 6889999999998 999999864


Q ss_pred             CCCCccccccccccccceEEEeeecCC----C----CCCCHHHHHHHHHcCCCCCCccee-eeeecccHHHHHHHHHcCc
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNY----K----PRSDLPSVVEKYMNKELEVEKFIT-HTVPFSEINKAFDLMLAGE  319 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~----~----~~~~~~~~i~~~~~~~l~~~~~~~-~~~~l~~i~~a~~~~~~~~  319 (329)
                      ..   .+ ...+..+++++.+++....    .    ..+.++++++++.++++.  +.++ ++|+|+++++|++.+.+++
T Consensus       249 ~~---~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~l~~~~~A~~~~~~~~  322 (343)
T 3gaz_A          249 GT---HK-LAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLA--PRLDPRTFSIAEIGSAYDAVLGRN  322 (343)
T ss_dssp             SC---CC-CHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCC--CCBCSCCEETTCHHHHHHHHHTCT
T ss_pred             Cc---cc-cchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcc--cCccCcEecHHHHHHHHHHHHcCC
Confidence            41   11 2234568888888654211    0    114578899999999874  5677 6999999999999999876


Q ss_pred             c-----eEEEEeeC
Q 047713          320 S-----IRCIIRMD  328 (329)
Q Consensus       320 ~-----~kvvv~~~  328 (329)
                      .     +|+|++..
T Consensus       323 ~~Gr~~GK~v~~~~  336 (343)
T 3gaz_A          323 DVPRQRGKIAITVE  336 (343)
T ss_dssp             TCCCCSSBCEEECC
T ss_pred             CcccccceEEEEec
Confidence            4     48888764

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=7.4e-41  Score=303.05  Aligned_cols=262  Identities=13%  Similarity=0.164  Sum_probs=214.0

Q ss_pred             CCCCcccCCcceEEEEEecCCC-CcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGV-TDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ..+|.++|||++|+|+++|++| ++|++||||++...                                           
T Consensus        77 ~~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g-------------------------------------------  113 (349)
T 3pi7_A           77 RVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATG-------------------------------------------  113 (349)
T ss_dssp             BCTTSBCCSEEEEEEEEECSSHHHHHHTTCEEEEECT-------------------------------------------
T ss_pred             CCCCCCccceEEEEEEEECCCccCCCCCCCEEEEecc-------------------------------------------
Confidence            4689999999999999999999 99999999997521                                           


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCC-CeEEEEc-CCHHHHHHHHHHHHc
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKG-QSVAIFG-LGAVGLAAAEGARVS  167 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g-~~VlI~G-ag~iG~aai~la~~~  167 (329)
                         ...+|+|+||+++|++.++++|+++++++||++++.+.|||++ ++.++ ++| ++|||+| +|++|++++|+|+..
T Consensus       114 ---~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~-~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~  188 (349)
T 3pi7_A          114 ---LSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAM-FDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEE  188 (349)
T ss_dssp             ---TSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHH-HHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHH
T ss_pred             ---CCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHH-HHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHC
Confidence               1125799999999999999999999999999999999999964 56666 667 6888885 599999999999999


Q ss_pred             CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          168 GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       168 G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+ +|++++.+++++++++++|++.++++.+.+  +.+.+++++++ ++|+|||++|.. .+..++++++++ |+++.+|
T Consensus       189 Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~--~~~~v~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~-G~iv~~G  263 (349)
T 3pi7_A          189 GF-RPIVTVRRDEQIALLKDIGAAHVLNEKAPD--FEATLREVMKAEQPRIFLDAVTGP-LASAIFNAMPKR-ARWIIYG  263 (349)
T ss_dssp             TC-EEEEEESCGGGHHHHHHHTCSEEEETTSTT--HHHHHHHHHHHHCCCEEEESSCHH-HHHHHHHHSCTT-CEEEECC
T ss_pred             CC-EEEEEeCCHHHHHHHHHcCCCEEEECCcHH--HHHHHHHHhcCCCCcEEEECCCCh-hHHHHHhhhcCC-CEEEEEe
Confidence            99 899999999999999999999999987765  88999999887 999999999874 568899999998 9999998


Q ss_pred             cCCCCCc-cccccccccccceEEEeeecCCCC------CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCc
Q 047713          247 VPNKDDA-FKTHPMNLLNERTLKGTFFGNYKP------RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE  319 (329)
Q Consensus       247 ~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~  319 (329)
                      ....... ++....++.+++++.|++...+..      .+.++++++++.++++  +++++++|+|+++++|++.+.++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~  341 (349)
T 3pi7_A          264 RLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRW--STDVTAVVPLAEAIAWVPAELTKP  341 (349)
T ss_dssp             CSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSC--CC-CCEEEEHHHHHHHHHHHHTSS
T ss_pred             ccCCCCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCc--ccccceEEcHHHHHHHHHHHhCCC
Confidence            6544322 222134467899999987654211      1456778888888877  456889999999999999666655


Q ss_pred             ceEEEEee
Q 047713          320 SIRCIIRM  327 (329)
Q Consensus       320 ~~kvvv~~  327 (329)
                      .+|+||++
T Consensus       342 ~gKvvl~p  349 (349)
T 3pi7_A          342 NGKVFIRP  349 (349)
T ss_dssp             SSCEEEEC
T ss_pred             CceEEEeC
Confidence            67999864

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4e-39  Score=291.63  Aligned_cols=259  Identities=20%  Similarity=0.319  Sum_probs=214.8

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++|+.|++||||++.+.                                            
T Consensus        85 ~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~--------------------------------------------  120 (351)
T 1yb5_A           85 PLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSST--------------------------------------------  120 (351)
T ss_dssp             CCSSBCCCSCEEEEEEEECTTCTTCCTTCEEEESCC--------------------------------------------
T ss_pred             CCCCCcCCceeEEEEEEECCCCCCCCCCCEEEEeCC--------------------------------------------
Confidence            468999999999999999999999999999986531                                            


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                          ..|+|+||+++|++.++++|++++++++|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+
T Consensus       121 ----~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga  196 (351)
T 1yb5_A          121 ----ISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL  196 (351)
T ss_dssp             ----SSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC
T ss_pred             ----CCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC
Confidence                13799999999999999999999999999999999999999877899999999999987 9999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|+++++++++.+.++++|++.++++.+.+  +.+.+++.+++ ++|+|||++|. ..+..++++++++ |+++.+|..
T Consensus       197 -~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~--~~~~~~~~~~~~~~D~vi~~~G~-~~~~~~~~~l~~~-G~iv~~g~~  271 (351)
T 1yb5_A          197 -KILGTAGTEEGQKIVLQNGAHEVFNHREVN--YIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSR  271 (351)
T ss_dssp             -EEEEEESSHHHHHHHHHTTCSEEEETTSTT--HHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE-EEEEECCCC
T ss_pred             -EEEEEeCChhHHHHHHHcCCCEEEeCCCch--HHHHHHHHcCCCCcEEEEECCCh-HHHHHHHHhccCC-CEEEEEecC
Confidence             899999999999999999999988877655  78888888877 89999999976 5788999999998 999999863


Q ss_pred             CCCCccccccccccccceEEEeeecCCCCCCCH----HHHHHHHHcCCCCCCcceeeeeecccHHHHHHH-HHcCc-ceE
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDL----PSVVEKYMNKELEVEKFITHTVPFSEINKAFDL-MLAGE-SIR  322 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~-~~~~~-~~k  322 (329)
                      . ...++ ...++.+++++.|+....... +++    +.+.+++.++++  +++++++|+|+++++|++. +++++ .+|
T Consensus       272 ~-~~~~~-~~~~~~~~~~i~g~~~~~~~~-~~~~~~~~~l~~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~~gK  346 (351)
T 1yb5_A          272 G-TIEIN-PRDTMAKESSIIGVTLFSSTK-EEFQQYAAALQAGMEIGWL--KPVIGSQYPLEKVAEAHENIIHGSGATGK  346 (351)
T ss_dssp             S-CEEEC-THHHHTTTCEEEECCGGGCCH-HHHHHHHHHHHHHHHHTCC--CCCEEEEEEGGGHHHHHHHHHHSSCCSSE
T ss_pred             C-CCccC-HHHHHhCCcEEEEEEeecCCH-HHHHHHHHHHHHHHHCCCc--cCccceEEcHHHHHHHHHHHHHhCCCCeE
Confidence            2 11111 123356888998875432211 233    345556677765  4568899999999999998 56544 469


Q ss_pred             EEEee
Q 047713          323 CIIRM  327 (329)
Q Consensus       323 vvv~~  327 (329)
                      +||.+
T Consensus       347 vvi~~  351 (351)
T 1yb5_A          347 MILLL  351 (351)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            98864

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.2e-39  Score=291.75  Aligned_cols=256  Identities=19%  Similarity=0.241  Sum_probs=209.6

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ...+|.++|||++|+|+++|++|++|++||||++.+..+                                         
T Consensus        64 ~~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~-----------------------------------------  102 (321)
T 3tqh_A           64 KNNLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFP-----------------------------------------  102 (321)
T ss_dssp             TTSCSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECSTT-----------------------------------------
T ss_pred             cCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEccCCC-----------------------------------------
Confidence            457899999999999999999999999999999764211                                         


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEc-CCHHHHHHHHHHHHcC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G-ag~iG~aai~la~~~G  168 (329)
                          ..+|+|+||+++|++.++++|++++++++|++++++.|||+++ +.+++++|++|||+| +|++|++++|+|+..|
T Consensus       103 ----~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G  177 (321)
T 3tqh_A          103 ----DHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG  177 (321)
T ss_dssp             ----TCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTT
T ss_pred             ----CCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC
Confidence                1247999999999999999999999999999999999999997 889999999999997 6999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      + +|+++. ++++.++++++|++.++++.+.+ .+.+.    . .++|+|||++|.+. +..++++++++ |+++.++..
T Consensus       178 a-~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~-~~~~~----~-~g~D~v~d~~g~~~-~~~~~~~l~~~-G~iv~~g~~  247 (321)
T 3tqh_A          178 T-TVITTA-SKRNHAFLKALGAEQCINYHEED-FLLAI----S-TPVDAVIDLVGGDV-GIQSIDCLKET-GCIVSVPTI  247 (321)
T ss_dssp             C-EEEEEE-CHHHHHHHHHHTCSEEEETTTSC-HHHHC----C-SCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCST
T ss_pred             C-EEEEEe-ccchHHHHHHcCCCEEEeCCCcc-hhhhh----c-cCCCEEEECCCcHH-HHHHHHhccCC-CEEEEeCCC
Confidence            9 788886 56678999999999999887654 12221    1 47999999998754 59999999998 999999753


Q ss_pred             CCCCccccccccccccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEee
Q 047713          249 NKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIRM  327 (329)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~~  327 (329)
                      ....   .......+++++.+....  ...++++++++++.++++.+  .++++|+|+++++|++.+++++.. |+||++
T Consensus       248 ~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  320 (321)
T 3tqh_A          248 TAGR---VIEVAKQKHRRAFGLLKQ--FNIEELHYLGKLVSEDKLRI--EISRIFQLSEAVTAHELLETGHVRGKLVFKV  320 (321)
T ss_dssp             THHH---HHHHHHHTTCEEECCCCC--CCHHHHHHHHHHHHTTSSCC--CEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             Cchh---hhhhhhhcceEEEEEecC--CCHHHHHHHHHHHHCCCccc--ccccEEcHHHHHHHHHHHHcCCCCceEEEEe
Confidence            3211   111234567777764321  12257899999999998754  588999999999999999998864 999986


Q ss_pred             C
Q 047713          328 D  328 (329)
Q Consensus       328 ~  328 (329)
                      +
T Consensus       321 ~  321 (321)
T 3tqh_A          321 R  321 (321)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=2.1e-40  Score=295.98  Aligned_cols=254  Identities=15%  Similarity=0.150  Sum_probs=196.5

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|+++|++|++|++||||++.+.                                            
T Consensus        56 ~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~--------------------------------------------   91 (315)
T 3goh_A           56 WSNGHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTS--------------------------------------------   91 (315)
T ss_dssp             CCTTCCCCSEEEEEEEEECTTSCGGGTTCEEEEECC--------------------------------------------
T ss_pred             CCCCCEeeeeeEEEEEEeCCCCCCCCCCCEEEEeCC--------------------------------------------
Confidence            368999999999999999999999999999997631                                            


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS  170 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~  170 (329)
                        ...+|+|+||+++|++.++++|++++++++|+++++++|||+++ +.+++++|++|||+|+|++|++++|+|+..|+ 
T Consensus        92 --~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-  167 (315)
T 3goh_A           92 --LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-  167 (315)
T ss_dssp             --TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-
T ss_pred             --CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence              11247999999999999999999999999999999999999998 88999999999999889999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          171 RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       171 ~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|++++ ++++.++++++|++++++  +        .+++ ++++|+|||++|.+ .+..++++++++ |+++.++....
T Consensus       168 ~Vi~~~-~~~~~~~~~~lGa~~v~~--d--------~~~v-~~g~Dvv~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~  233 (315)
T 3goh_A          168 VVDLVS-ASLSQALAAKRGVRHLYR--E--------PSQV-TQKYFAIFDAVNSQ-NAAALVPSLKAN-GHIICIQDRIP  233 (315)
T ss_dssp             EEEEEC-SSCCHHHHHHHTEEEEES--S--------GGGC-CSCEEEEECC--------TTGGGEEEE-EEEEEECCC--
T ss_pred             EEEEEE-ChhhHHHHHHcCCCEEEc--C--------HHHh-CCCccEEEECCCch-hHHHHHHHhcCC-CEEEEEeCCCC
Confidence            899998 899999999999999884  1        1222 44999999999875 458889999998 99999975432


Q ss_pred             CCccccc-cccccccceEEEeee-cCCC----CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcceEEE
Q 047713          251 DDAFKTH-PMNLLNERTLKGTFF-GNYK----PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCI  324 (329)
Q Consensus       251 ~~~~~~~-~~~~~~~~~~~g~~~-~~~~----~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~kvv  324 (329)
                      ....... .....+++++.+++. ....    ..+.++++++++.++++  +++++++|+|+++++|++.+. ...+|+|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~~~-~~~gKvv  310 (315)
T 3goh_A          234 APIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKM--EIAAPDIFRFEQMIEALDHSE-QTKLKTV  310 (315)
T ss_dssp             --------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSS--CCCCCEEEEGGGHHHHHHHHH-HHCCCEE
T ss_pred             ccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCc--ccccceEecHHHHHHHHHHHH-hcCCcEE
Confidence            2111111 111223333333221 1110    01246789999999976  467789999999999999998 5557999


Q ss_pred             EeeCC
Q 047713          325 IRMDG  329 (329)
Q Consensus       325 v~~~~  329 (329)
                      |++++
T Consensus       311 i~~~~  315 (315)
T 3goh_A          311 LTLNE  315 (315)
T ss_dssp             EESCC
T ss_pred             EEecC
Confidence            99875

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=1.7e-39  Score=295.91  Aligned_cols=261  Identities=16%  Similarity=0.197  Sum_probs=208.6

Q ss_pred             cccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeecc
Q 047713           15 RIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFV   94 (329)
Q Consensus        15 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~   94 (329)
                      .++|||++|+|+++|++|+.|++||||++.+.                                                
T Consensus        74 ~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~------------------------------------------------  105 (364)
T 1gu7_A           74 APCGNEGLFEVIKVGSNVSSLEAGDWVIPSHV------------------------------------------------  105 (364)
T ss_dssp             EECCSCCEEEEEEECTTCCSCCTTCEEEESSS------------------------------------------------
T ss_pred             cccCceeEEEEEEeCCCCCcCCCCCEEEecCC------------------------------------------------
Confidence            89999999999999999999999999996531                                                


Q ss_pred             ccccccccEEeeeccEEEcCC-----------CCCccchhcccccccchhhhhhhccCCCCC-CeEEEEcC-CHHHHHHH
Q 047713           95 GTSTFSEYTVTHVGCVAKINP-----------AAPLDKVCVLSCGISTGFGATVNVAKPKKG-QSVAIFGL-GAVGLAAA  161 (329)
Q Consensus        95 ~~g~~a~~~~v~~~~~~~~p~-----------~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g-~~VlI~Ga-g~iG~aai  161 (329)
                      .+|+|+||+++|++.++++|+           ++++++||++++++.|||+++....++++| ++|||+|+ |++|++++
T Consensus       106 ~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~ai  185 (364)
T 1gu7_A          106 NFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYAS  185 (364)
T ss_dssp             CCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHH
T ss_pred             CCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHH
Confidence            137999999999999999998           899999999999999999998777799999 99999987 99999999


Q ss_pred             HHHHHcCCCEEEEEcCChhh----HHHHHhcCCceeeCCCCC-CchHHHHHHhhh--cC-CccEEEEecCCHHHHHHHHH
Q 047713          162 EGARVSGASRIIGVDLNPSR----FNEAKKFGVTEFVNPKDY-DKPVQQVIADMT--NG-GVDRSVECTGSVQAMISAFE  233 (329)
Q Consensus       162 ~la~~~G~~~vv~~~~~~~~----~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~--~~-~~d~Vid~~g~~~~~~~~~~  233 (329)
                      |+|+.+|+ +++++.++.++    .++++++|+++++++.+. ..++.+.+++++  ++ ++|+|||++|..... .+++
T Consensus       186 qlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~-~~~~  263 (364)
T 1gu7_A          186 QIGKLLNF-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSST-GIAR  263 (364)
T ss_dssp             HHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHH-HHHH
T ss_pred             HHHHHCCC-EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhHH-HHHH
Confidence            99999999 67777655443    677899999999886531 013777888887  55 899999999876554 8899


Q ss_pred             hhccCCeEEEEeccCCCCCccccc-cccccccceEEEeeecCCCC------CCCHHHHHHHHHcCCCCCCcceeeee-ec
Q 047713          234 CVHDGWGVAVLVGVPNKDDAFKTH-PMNLLNERTLKGTFFGNYKP------RSDLPSVVEKYMNKELEVEKFITHTV-PF  305 (329)
Q Consensus       234 ~l~~~~G~vv~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~------~~~~~~~i~~~~~~~l~~~~~~~~~~-~l  305 (329)
                      +++++ |+++.+|...... .... ..++.+++++.|+....+..      .+.++++++++.++++.+....+..+ ++
T Consensus       264 ~l~~~-G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l  341 (364)
T 1gu7_A          264 KLNNN-GLMLTYGGMSFQP-VTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGT  341 (364)
T ss_dssp             TSCTT-CEEEECCCCSSCC-EEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSS
T ss_pred             HhccC-CEEEEecCCCCCC-cccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCch
Confidence            99998 9999998754321 1222 22356889998876543211      13578899999999887765433333 34


Q ss_pred             ccHHHHHHHHHcCcc-eEEEEee
Q 047713          306 SEINKAFDLMLAGES-IRCIIRM  327 (329)
Q Consensus       306 ~~i~~a~~~~~~~~~-~kvvv~~  327 (329)
                      +++++|++.+.+++. +|+||++
T Consensus       342 ~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          342 KPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             SCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             hhHHHHHHHHHhCCCCceEEEeC
Confidence            599999999988764 5999874

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.9e-39  Score=288.65  Aligned_cols=261  Identities=18%  Similarity=0.247  Sum_probs=215.5

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++|+.|++||||...     +                                        
T Consensus        55 ~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~-----g----------------------------------------   89 (327)
T 1qor_A           55 PSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYA-----Q----------------------------------------   89 (327)
T ss_dssp             SSSSBCCCSCEEEEEEEECTTCCSCCTTCEEEES-----C----------------------------------------
T ss_pred             CCCCCCCCceeEEEEEEECCCCCCCCCCCEEEEC-----C----------------------------------------
Confidence            3579999999999999999999999999999421     0                                        


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                         ..+|+|+||+++|++.++++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+
T Consensus        90 ---~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~  166 (327)
T 1qor_A           90 ---SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA  166 (327)
T ss_dssp             ---CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC
T ss_pred             ---CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence               013799999999999999999999999999999999999999877889999999999985 9999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|+++++++++.+.++++|++.+++..+.+  +.+.+.+.+.+ ++|++||++| ...++.++++++++ |+++.+|..
T Consensus       167 -~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~-G~iv~~g~~  241 (327)
T 1qor_A          167 -KLIGTVGTAQKAQSALKAGAWQVINYREED--LVERLKEITGGKKVRVVYDSVG-RDTWERSLDCLQRR-GLMVSFGNS  241 (327)
T ss_dssp             -EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTCCEEEEEECSC-GGGHHHHHHTEEEE-EEEEECCCT
T ss_pred             -EEEEEeCCHHHHHHHHHcCCCEEEECCCcc--HHHHHHHHhCCCCceEEEECCc-hHHHHHHHHHhcCC-CEEEEEecC
Confidence             899999999999999999999888877655  77888887766 8999999998 67899999999998 999999875


Q ss_pred             CCCC-ccccccccccc-cceEEEeeecCCC-----CCCCHHHHHHHHHcCCCCCCccee--eeeecccHHHHHHHHHcCc
Q 047713          249 NKDD-AFKTHPMNLLN-ERTLKGTFFGNYK-----PRSDLPSVVEKYMNKELEVEKFIT--HTVPFSEINKAFDLMLAGE  319 (329)
Q Consensus       249 ~~~~-~~~~~~~~~~~-~~~~~g~~~~~~~-----~~~~~~~~i~~~~~~~l~~~~~~~--~~~~l~~i~~a~~~~~~~~  319 (329)
                      .... .++. ..++.+ ++++.+...+.+.     ..+.++++++++.++++.  +.++  ++|+|+++++|++.+.+++
T Consensus       242 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~~l~~~~~A~~~~~~~~  318 (327)
T 1qor_A          242 SGAVTGVNL-GILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIK--VDVAEQQKYPLKDAQRAHEILESRA  318 (327)
T ss_dssp             TCCCCCBCT-HHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSC--CCCCGGGEEEGGGHHHHHHHHHTTC
T ss_pred             CCCCCccCH-HHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcc--cccccCcEEcHHHHHHHHHHHHhCC
Confidence            4421 1221 223345 6666654332111     113478899999999775  4577  8999999999999998876


Q ss_pred             c-eEEEEee
Q 047713          320 S-IRCIIRM  327 (329)
Q Consensus       320 ~-~kvvv~~  327 (329)
                      . .|+||.+
T Consensus       319 ~~gKvvl~~  327 (327)
T 1qor_A          319 TQGSSLLIP  327 (327)
T ss_dssp             CCBCCEEEC
T ss_pred             CCceEEEeC
Confidence            4 5888863

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=6.6e-39  Score=291.46  Aligned_cols=262  Identities=18%  Similarity=0.225  Sum_probs=218.0

Q ss_pred             CCCCcccCCcceEEEEEecCCCC-cCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVT-DLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ..+|+++|||++|+|+++|++|+ .|++||||++..                                            
T Consensus        81 ~~~P~i~G~E~~G~V~~vG~~V~~~~~vGdrV~~~~--------------------------------------------  116 (362)
T 2c0c_A           81 VKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMA--------------------------------------------  116 (362)
T ss_dssp             CCSCEECCSEEEEEEEEECTTGGGTCCTTCEEEEEC--------------------------------------------
T ss_pred             CCCCCCCCceeEEEEEEECCCccCCCCCCCEEEEcc--------------------------------------------
Confidence            36799999999999999999999 999999998641                                            


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSG  168 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G  168 (329)
                            .|+|+||+++|++.++++|+. + .++|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|
T Consensus       117 ------~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G  188 (362)
T 2c0c_A          117 ------PGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAK  188 (362)
T ss_dssp             ------SCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTT
T ss_pred             ------CCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCC
Confidence                  379999999999999999996 3 5678899999999999888889999999999985 999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          169 ASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       169 ~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      + +|+++++++++.++++++|++.++++.+.+  +.+.+++.+++++|+|||++|. ..++.++++++++ |+++.+|..
T Consensus       189 a-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~--~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~  263 (362)
T 2c0c_A          189 C-HVIGTCSSDEKSAFLKSLGCDRPINYKTEP--VGTVLKQEYPEGVDVVYESVGG-AMFDLAVDALATK-GRLIVIGFI  263 (362)
T ss_dssp             C-EEEEEESSHHHHHHHHHTTCSEEEETTTSC--HHHHHHHHCTTCEEEEEECSCT-HHHHHHHHHEEEE-EEEEECCCG
T ss_pred             C-EEEEEECCHHHHHHHHHcCCcEEEecCChh--HHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHHhcC-CEEEEEeCC
Confidence            9 899999999999999999999998887655  7778887765589999999987 6889999999998 999999864


Q ss_pred             CCCCc------c---ccccccccccceEEEeeecCCC--CCCCHHHHHHHHHcCCCCCCcc------eeeeeecccHHHH
Q 047713          249 NKDDA------F---KTHPMNLLNERTLKGTFFGNYK--PRSDLPSVVEKYMNKELEVEKF------ITHTVPFSEINKA  311 (329)
Q Consensus       249 ~~~~~------~---~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~~~~l~~~~~------~~~~~~l~~i~~a  311 (329)
                      .....      .   .+...++.+++++.|+....+.  ..+.++++++++.++++.+...      +++.|+|+++++|
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A  343 (362)
T 2c0c_A          264 SGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRA  343 (362)
T ss_dssp             GGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHH
T ss_pred             CCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHH
Confidence            32210      0   1112345688999987754332  1245788999999998865432      3456899999999


Q ss_pred             HHHHHcCcc-eEEEEeeCC
Q 047713          312 FDLMLAGES-IRCIIRMDG  329 (329)
Q Consensus       312 ~~~~~~~~~-~kvvv~~~~  329 (329)
                      ++.+++++. +|+||++++
T Consensus       344 ~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          344 VNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             HHHHHTTCCSBEEEEECCC
T ss_pred             HHHHHcCCCCceEEEEcCC
Confidence            999988765 599998875

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=2.3e-39  Score=294.12  Aligned_cols=260  Identities=20%  Similarity=0.331  Sum_probs=206.0

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|++|+.|++||||++.+.                                            
T Consensus        82 ~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~--------------------------------------------  117 (357)
T 1zsy_A           82 PELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANA--------------------------------------------  117 (357)
T ss_dssp             CCSSEECCSCCEEEEEEECTTCCSCCTTCEEEESSS--------------------------------------------
T ss_pred             CCCCccccceEEEEEEEeCCCCCCCCCCCEEEEcCC--------------------------------------------
Confidence            357999999999999999999999999999996531                                            


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                          .+|+|+||+++|++.++++|+++++++||++++++.|||+++...+++++|++|||+|+ |++|++++|+|+.+|+
T Consensus       118 ----~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga  193 (357)
T 1zsy_A          118 ----GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL  193 (357)
T ss_dssp             ----CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC
T ss_pred             ----CCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC
Confidence                13799999999999999999999999999999999999999888889999999999987 9999999999999999


Q ss_pred             CEEEEEcC-Ch---hhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC--CccEEEEecCCHHHHHHHHHhhccCCeEEE
Q 047713          170 SRIIGVDL-NP---SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG--GVDRSVECTGSVQAMISAFECVHDGWGVAV  243 (329)
Q Consensus       170 ~~vv~~~~-~~---~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv  243 (329)
                       +++++.. ++   ++.++++++|++.++++.+.   ....+.+.+.+  ++|+|||++|.+ ....++++++++ |+++
T Consensus       194 -~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~---~~~~~~~~~~~~~~~Dvvid~~g~~-~~~~~~~~l~~~-G~iv  267 (357)
T 1zsy_A          194 -RTINVVRDRPDIQKLSDRLKSLGAEHVITEEEL---RRPEMKNFFKDMPQPRLALNCVGGK-SSTELLRQLARG-GTMV  267 (357)
T ss_dssp             -EEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHH---HSGGGGGTTSSSCCCSEEEESSCHH-HHHHHHTTSCTT-CEEE
T ss_pred             -EEEEEecCccchHHHHHHHHhcCCcEEEecCcc---hHHHHHHHHhCCCCceEEEECCCcH-HHHHHHHhhCCC-CEEE
Confidence             5555543 32   35688999999998875321   11234555544  599999999875 446789999998 9999


Q ss_pred             EeccCCCC-CccccccccccccceEEEeeecCCC----C---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHH
Q 047713          244 LVGVPNKD-DAFKTHPMNLLNERTLKGTFFGNYK----P---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLM  315 (329)
Q Consensus       244 ~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~----~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~  315 (329)
                      .+|..... ..++. ..++.+++++.|+....+.    .   ++.++++++++.++++.+.  +.++|+|+++++|++.+
T Consensus       268 ~~G~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~  344 (357)
T 1zsy_A          268 TYGGMAKQPVVASV-SLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP--ACSQVPLQDYQSALEAS  344 (357)
T ss_dssp             ECCCCTTCCBCCCH-HHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCC--CEEEEEGGGHHHHHHHH
T ss_pred             EEecCCCCCCCCCH-HHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCc--cceEEcHHHHHHHHHHH
Confidence            99754322 11221 2235688999987654321    0   1346789999999987654  45899999999999999


Q ss_pred             HcCcc-eEEEEee
Q 047713          316 LAGES-IRCIIRM  327 (329)
Q Consensus       316 ~~~~~-~kvvv~~  327 (329)
                      .+++. +|+||++
T Consensus       345 ~~~~~~gKvvl~~  357 (357)
T 1zsy_A          345 MKPFISSKQILTM  357 (357)
T ss_dssp             TSSSCSSEEEEEC
T ss_pred             HhCCCCCcEEEeC
Confidence            88775 5998864

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=5.9e-40  Score=294.32  Aligned_cols=262  Identities=14%  Similarity=0.146  Sum_probs=211.8

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++|  +++|++||||++.+   |.      .                                 
T Consensus        55 ~~~p~v~G~E~~G~V~~~G--v~~~~vGdrV~~~~---~~------~---------------------------------   90 (324)
T 3nx4_A           55 RHFPMIPGIDFAGTVHASE--DPRFHAGQEVLLTG---WG------V---------------------------------   90 (324)
T ss_dssp             CSSSBCCCSEEEEEEEEES--STTCCTTCEEEEEC---TT------B---------------------------------
T ss_pred             CCCCccccceeEEEEEEeC--CCCCCCCCEEEEcc---cc------c---------------------------------
Confidence            4789999999999999998  68999999999753   10      0                                 


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhh--hccCCCCCC-eEEEEcC-CHHHHHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATV--NVAKPKKGQ-SVAIFGL-GAVGLAAAEGARV  166 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~~g~-~VlI~Ga-g~iG~aai~la~~  166 (329)
                       +...+|+|+||+++|++.++++|+++++++||++++++.|||.++.  ...++++++ +|||+|+ |++|++++|+|+.
T Consensus        91 -g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~  169 (324)
T 3nx4_A           91 -GENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHK  169 (324)
T ss_dssp             -TTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHH
T ss_pred             -CCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHH
Confidence             0123579999999999999999999999999999999999999875  445677633 4999987 9999999999999


Q ss_pred             cCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          167 SGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       167 ~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .|+ +|+++++++++.++++++|+++++++.+.+  .   +++++++++|+|||++|. +.++.++++++++ |+++.+|
T Consensus       170 ~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~---~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G  241 (324)
T 3nx4_A          170 LGY-QVAAVSGRESTHGYLKSLGANRILSRDEFA--E---SRPLEKQLWAGAIDTVGD-KVLAKVLAQMNYG-GCVAACG  241 (324)
T ss_dssp             TTC-CEEEEESCGGGHHHHHHHTCSEEEEGGGSS--C---CCSSCCCCEEEEEESSCH-HHHHHHHHTEEEE-EEEEECC
T ss_pred             cCC-EEEEEeCCHHHHHHHHhcCCCEEEecCCHH--H---HHhhcCCCccEEEECCCc-HHHHHHHHHHhcC-CEEEEEe
Confidence            999 899999999999999999999999876644  2   455555689999999986 4899999999998 9999998


Q ss_pred             cCCCCCccccccccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eE
Q 047713          247 VPNKDDAFKTHPMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IR  322 (329)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~k  322 (329)
                      .............++.+++++.|+.......   .+.++++++++.++++.  +. +++|+|+++++|++.+.+++. +|
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~-~~~~~l~~~~~A~~~~~~~~~~gk  318 (324)
T 3nx4_A          242 LAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYA--QA-ATEITLADAPKFADAIINNQVQGR  318 (324)
T ss_dssp             CTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHH--HH-EEEEEGGGHHHHHHHHHTTCCCSE
T ss_pred             cCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCC--CC-ceeEeHHHHHHHHHHHHhCCCCce
Confidence            7554321111223457899999876543321   13467788888888654  44 899999999999999999886 59


Q ss_pred             EEEeeC
Q 047713          323 CIIRMD  328 (329)
Q Consensus       323 vvv~~~  328 (329)
                      +||+++
T Consensus       319 vvv~~~  324 (324)
T 3nx4_A          319 TLVKIK  324 (324)
T ss_dssp             EEEECC
T ss_pred             EEEecC
Confidence            999875

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=6.1e-38  Score=286.56  Aligned_cols=259  Identities=20%  Similarity=0.261  Sum_probs=206.4

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      ++|.++|||++|+|+++|++|+.|++||||++.+..                                            
T Consensus        93 ~~P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~--------------------------------------------  128 (375)
T 2vn8_A           93 EFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPP--------------------------------------------  128 (375)
T ss_dssp             TCSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCT--------------------------------------------
T ss_pred             cCCcccceeeeEEEEEeCCCCCCCCCCCEEEEecCC--------------------------------------------
Confidence            489999999999999999999999999999975310                                            


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccC----CCCCCeEEEEcC-CHHHHHHHHHHHH
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAK----PKKGQSVAIFGL-GAVGLAAAEGARV  166 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~----~~~g~~VlI~Ga-g~iG~aai~la~~  166 (329)
                        ...|+|+||+++|++.++++|+++++++||++++++.|||+++.+.++    +++|++|||+|+ |++|++++|+|+.
T Consensus       129 --~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~  206 (375)
T 2vn8_A          129 --WKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKA  206 (375)
T ss_dssp             --TSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHH
T ss_pred             --CCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHh
Confidence              114799999999999999999999999999999999999999877788    999999999984 9999999999999


Q ss_pred             cCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH-HHHHHHHHhhccCCeEEEEe
Q 047713          167 SGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV-QAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       167 ~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~-~~~~~~~~~l~~~~G~vv~~  245 (329)
                      .|+ +|++++ ++++.++++++|++.++++.+.+  +.+.+++.  +++|+|||++|.. ..+..++++++++ |+++.+
T Consensus       207 ~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~--~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~  279 (375)
T 2vn8_A          207 WDA-HVTAVC-SQDASELVRKLGADDVIDYKSGS--VEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTL  279 (375)
T ss_dssp             TTC-EEEEEE-CGGGHHHHHHTTCSEEEETTSSC--HHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEES
T ss_pred             CCC-EEEEEe-ChHHHHHHHHcCCCEEEECCchH--HHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEe
Confidence            999 888887 67889999999999999887655  66666553  4799999999986 5668888999998 999999


Q ss_pred             ccCCCCCc----cccc-----ccccc-------ccceEEEeeecCCCCCCCHHHHHHHHHcCCCCCCcceeeeeecccHH
Q 047713          246 GVPNKDDA----FKTH-----PMNLL-------NERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEIN  309 (329)
Q Consensus       246 g~~~~~~~----~~~~-----~~~~~-------~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~  309 (329)
                      |.......    ....     ..++.       +...+.+...  ....+.++++++++.++++  +++++++|+|++++
T Consensus       280 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~  355 (375)
T 2vn8_A          280 VTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF--MASGPCLDDIAELVDAGKI--RPVIEQTFPFSKVP  355 (375)
T ss_dssp             CCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHHHTTSC--CCCEEEEEEGGGHH
T ss_pred             CCCcccccccccccchhheeehhhccccccccccCcceEEEEe--CCCHHHHHHHHHHHHCCCc--ccCcCeEECHHHHH
Confidence            86332100    0000     01111       2223322211  1112357899999999976  46788999999999


Q ss_pred             HHHHHHHcCcc-eEEEEee
Q 047713          310 KAFDLMLAGES-IRCIIRM  327 (329)
Q Consensus       310 ~a~~~~~~~~~-~kvvv~~  327 (329)
                      +|++.+++++. +|+||++
T Consensus       356 ~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          356 EAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHHHHcCCCCCeEEEEe
Confidence            99999988764 5999875

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=5.2e-37  Score=276.46  Aligned_cols=255  Identities=19%  Similarity=0.255  Sum_probs=214.5

Q ss_pred             CCCcccCCc----ceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCC
Q 047713           12 LFPRIFGHE----AGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKG   87 (329)
Q Consensus        12 ~~P~~~G~e----~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   87 (329)
                      .+|.++|||    ++|+|++  ++|+.|++||||++.                                           
T Consensus        65 ~~p~~~G~e~g~~~~G~V~~--~~v~~~~vGdrV~~~-------------------------------------------   99 (336)
T 4b7c_A           65 IPPVGIGEVMRALGVGKVLV--SKHPGFQAGDYVNGA-------------------------------------------   99 (336)
T ss_dssp             SCCCCTTSBCCCEEEEEEEE--ECSTTCCTTCEEEEE-------------------------------------------
T ss_pred             CCCCCCCcccCCceEEEEEe--cCCCCCCCCCEEecc-------------------------------------------
Confidence            457788887    7999999  458999999999854                                           


Q ss_pred             CceeeccccccccccEEeeeccEEEcCCCCCccch--hcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHH
Q 047713           88 KPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKV--CVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGA  164 (329)
Q Consensus        88 ~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~a--a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la  164 (329)
                               |+|+||+++|++.++++|+++++.++  |+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|
T Consensus       100 ---------G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a  170 (336)
T 4b7c_A          100 ---------LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIA  170 (336)
T ss_dssp             ---------CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHH
T ss_pred             ---------CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence                     69999999999999999999987776  7899999999999889999999999999987 99999999999


Q ss_pred             HHcCCCEEEEEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEE
Q 047713          165 RVSGASRIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAV  243 (329)
Q Consensus       165 ~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv  243 (329)
                      +..|+ +|+++++++++.+.+ +++|++.++++.+.+  +.+.+++.+++++|+|||++|. +.++.++++++++ |+++
T Consensus       171 ~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv  245 (336)
T 4b7c_A          171 RLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKNED--LAAGLKRECPKGIDVFFDNVGG-EILDTVLTRIAFK-ARIV  245 (336)
T ss_dssp             HHTTC-EEEEEESSHHHHHHHHHTTCCSEEEETTTSC--HHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEE
T ss_pred             HHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEECCCHH--HHHHHHHhcCCCceEEEECCCc-chHHHHHHHHhhC-CEEE
Confidence            99999 899999999999998 899999999887766  8888888886699999999986 6889999999998 9999


Q ss_pred             EeccCCC----CC-ccccc-cccccccceEEEeeecCCCC--CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHH
Q 047713          244 LVGVPNK----DD-AFKTH-PMNLLNERTLKGTFFGNYKP--RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLM  315 (329)
Q Consensus       244 ~~g~~~~----~~-~~~~~-~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~  315 (329)
                      .+|....    .. ..... ..++.+++++.|+....+..  .+.++++++++.++++.+.  +..+++|+++++|++.+
T Consensus       246 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~  323 (336)
T 4b7c_A          246 LCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSR--EDIVEGLETFPETLLKL  323 (336)
T ss_dssp             ECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCC--EEEEECGGGHHHHHHHH
T ss_pred             EEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccc--eeeecCHHHHHHHHHHH
Confidence            9986542    10 01111 23456899999987654321  1457889999999987665  44568999999999999


Q ss_pred             HcCcc-eEEEEee
Q 047713          316 LAGES-IRCIIRM  327 (329)
Q Consensus       316 ~~~~~-~kvvv~~  327 (329)
                      .+++. +|+||++
T Consensus       324 ~~~~~~gKvvi~~  336 (336)
T 4b7c_A          324 FSGENFGKLVLKV  336 (336)
T ss_dssp             HTTCCCSEEEEEC
T ss_pred             HcCCCCceEEEeC
Confidence            98876 4999875

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=6.9e-38  Score=309.32  Aligned_cols=255  Identities=20%  Similarity=0.290  Sum_probs=213.7

Q ss_pred             CCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceee
Q 047713           13 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYH   92 (329)
Q Consensus        13 ~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~   92 (329)
                      .|.++|||++|+|+++|++|++|++||||++..                                               
T Consensus       264 ~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~~~-----------------------------------------------  296 (795)
T 3slk_A          264 GVASLGSEGAGVVVETGPGVTGLAPGDRVMGMI-----------------------------------------------  296 (795)
T ss_dssp             SCCCSCCCEEEEEEEECSSCCSSCTTCEEEECC-----------------------------------------------
T ss_pred             CCccccceeEEEEEEeCCCCCcCCCCCEEEEEe-----------------------------------------------
Confidence            467899999999999999999999999998642                                               


Q ss_pred             ccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCE
Q 047713           93 FVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASR  171 (329)
Q Consensus        93 ~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~  171 (329)
                         .|+|+||+++|++.++++|++++++++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +
T Consensus       297 ---~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~  372 (795)
T 3slk_A          297 ---PKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-E  372 (795)
T ss_dssp             ---SSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-C
T ss_pred             ---cCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-E
Confidence               3699999999999999999999999999999999999999989999999999999986 9999999999999999 7


Q ss_pred             EEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          172 IIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       172 vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      |+++.+++ +.+.++ +|+++++++.+.+  +.+.+++.+++ ++|+|||++|+ +.++.++++++++ |+++.+|....
T Consensus       373 V~~t~~~~-k~~~l~-lga~~v~~~~~~~--~~~~i~~~t~g~GvDvVld~~gg-~~~~~~l~~l~~~-Gr~v~iG~~~~  446 (795)
T 3slk_A          373 VYATASED-KWQAVE-LSREHLASSRTCD--FEQQFLGATGGRGVDVVLNSLAG-EFADASLRMLPRG-GRFLELGKTDV  446 (795)
T ss_dssp             EEEECCGG-GGGGSC-SCGGGEECSSSST--HHHHHHHHSCSSCCSEEEECCCT-TTTHHHHTSCTTC-EEEEECCSTTC
T ss_pred             EEEEeChH-Hhhhhh-cChhheeecCChh--HHHHHHHHcCCCCeEEEEECCCc-HHHHHHHHHhcCC-CEEEEeccccc
Confidence            88887655 656665 9999999988776  99999999988 99999999976 6889999999998 99999987554


Q ss_pred             CCccccccccccccceEEEeeecCCC---CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcce-EEEEe
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYK---PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESI-RCIIR  326 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kvvv~  326 (329)
                      ......  ....++.++.+..+....   ..+.++++++++.++++.  +++.++|+++++++||+.+.++++. |+||+
T Consensus       447 ~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~--p~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~  522 (795)
T 3slk_A          447 RDPVEV--ADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLE--PLPVTAWDVRQAPEALRHLSQARHVGKLVLT  522 (795)
T ss_dssp             CCHHHH--HHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCC--CCCEEEEEGGGHHHHHHHHHHTCCCBEEEEE
T ss_pred             cCcccc--cccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcC--CCcceeEcHHHHHHHHHHHhcCCccceEEEe
Confidence            322211  112355666554432111   113578899999999764  4678999999999999999988864 99998


Q ss_pred             eC
Q 047713          327 MD  328 (329)
Q Consensus       327 ~~  328 (329)
                      ++
T Consensus       523 ~~  524 (795)
T 3slk_A          523 MP  524 (795)
T ss_dssp             CC
T ss_pred             cC
Confidence            75

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=5.3e-38  Score=287.14  Aligned_cols=258  Identities=13%  Similarity=0.145  Sum_probs=208.1

Q ss_pred             CCCCcccCCcceEEEEEecCCC-CcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGV-TDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      .++|+++|||++|+|+++|++| ++|++||||++.+                                            
T Consensus        88 ~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~--------------------------------------------  123 (379)
T 3iup_A           88 LDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG--------------------------------------------  123 (379)
T ss_dssp             TTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC--------------------------------------------
T ss_pred             cCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC--------------------------------------------
Confidence            3578999999999999999999 8999999999752                                            


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEE--cCCHHHHHHHHHHHHc
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF--GLGAVGLAAAEGARVS  167 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~--Gag~iG~aai~la~~~  167 (329)
                            +|+|+||+++|++.++++|+++++++||+++++..|||+++ +... ++|++|||+  |+|++|++++|+|+..
T Consensus       124 ------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~  195 (379)
T 3iup_A          124 ------GAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQICLKD  195 (379)
T ss_dssp             ------SCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHHHHH
T ss_pred             ------CCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHHHHC
Confidence                  37999999999999999999999999999999999999764 4444 899999999  4599999999999999


Q ss_pred             CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhc-----cC---
Q 047713          168 GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVH-----DG---  238 (329)
Q Consensus       168 G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~-----~~---  238 (329)
                      |+ +|+++++++++.++++++|+++++++.+.+  +.+.+++++++ ++|+|||++|.+..++.++++++     ++   
T Consensus       196 Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~--~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~  272 (379)
T 3iup_A          196 GI-KLVNIVRKQEQADLLKAQGAVHVCNAASPT--FMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREY  272 (379)
T ss_dssp             TC-CEEEEESSHHHHHHHHHTTCSCEEETTSTT--HHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSC
T ss_pred             CC-EEEEEECCHHHHHHHHhCCCcEEEeCCChH--HHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccce
Confidence            99 799999999999999999999999987766  89999999988 99999999998777788888875     33   


Q ss_pred             -------CeEEEEeccCCCCCccccccccccccceEEEeeecCCCC---CCC----HHHHHHHHHcCCCCCCcceeeeee
Q 047713          239 -------WGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKP---RSD----LPSVVEKYMNKELEVEKFITHTVP  304 (329)
Q Consensus       239 -------~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~----~~~~i~~~~~~~l~~~~~~~~~~~  304 (329)
                             .|+++.+|..... ...+ ...+.+++++.|+.+..+..   .+.    ++++++++.+   .+.++++++|+
T Consensus       273 ~~~G~~~~g~iv~~G~~~~~-~~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~i~~~~~  347 (379)
T 3iup_A          273 SRYGSTTHKQVYLYGGLDTS-PTEF-NRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT---TFASHYSKEIS  347 (379)
T ss_dssp             CTTCCCSCEEEEECCCSEEE-EEEE-CCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT---TTCCCCSEEEE
T ss_pred             eecccccCceEEEecCCCCC-cccc-ccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc---cCCCcceEEec
Confidence                   0455555542211 1112 23356788888877654311   122    2444555544   25667889999


Q ss_pred             cccH--HHHHHHHHcCcc-eEEEEeeC
Q 047713          305 FSEI--NKAFDLMLAGES-IRCIIRMD  328 (329)
Q Consensus       305 l~~i--~~a~~~~~~~~~-~kvvv~~~  328 (329)
                      |+++  ++|++.+.+++. +|+||+++
T Consensus       348 l~~~~~~~A~~~l~~~~~~gKvVv~~~  374 (379)
T 3iup_A          348 LAEVLDLDMIAVYNKRATGEKYLINPN  374 (379)
T ss_dssp             HHHHTCHHHHHHHTTCCTTCCEEEETT
T ss_pred             HHHhhhHHHHHHHhcCCCCceEEEeCC
Confidence            9999  999999998865 59999875

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.6e-36  Score=275.55  Aligned_cols=259  Identities=16%  Similarity=0.211  Sum_probs=215.6

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|++  ++|+.|++||||++.                                              
T Consensus        74 ~~~p~v~G~E~~G~V~~--~~v~~~~vGdrV~~~----------------------------------------------  105 (357)
T 2zb4_A           74 WQLSQVVDGGGIGIIEE--SKHTNLTKGDFVTSF----------------------------------------------  105 (357)
T ss_dssp             CCBTSBCEEEEEEEEEE--ECSTTCCTTCEEEEE----------------------------------------------
T ss_pred             CCCCccccccEEEEEEe--cCCCCCCCCCEEEec----------------------------------------------
Confidence            36789999999999999  899999999999864                                              


Q ss_pred             eeccccccccccEEeeeccEEEcCCCC-----CccchhcccccccchhhhhhhccCCCCC--CeEEEEcC-CHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAA-----PLDKVCVLSCGISTGFGATVNVAKPKKG--QSVAIFGL-GAVGLAAAE  162 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~-----~~~~aa~~~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga-g~iG~aai~  162 (329)
                           .|+|+||+++|++.++++|+++     +++ +|+++++++|||+++.+.+++++|  ++|||+|+ |++|++++|
T Consensus       106 -----~G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~  179 (357)
T 2zb4_A          106 -----YWPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQ  179 (357)
T ss_dssp             -----EEESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHH
T ss_pred             -----CCCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHH
Confidence                 2689999999999999999998     555 688999999999998788999999  99999987 999999999


Q ss_pred             HHHHcCCCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeE
Q 047713          163 GARVSGASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGV  241 (329)
Q Consensus       163 la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~  241 (329)
                      +|+..|+++|+++++++++.+.+++ +|++.++++.+.+  +.+.+++.+.+++|++||++|. ..++.++++++++ |+
T Consensus       180 ~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~--~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~-G~  255 (357)
T 2zb4_A          180 IGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDN--VAEQLRESCPAGVDVYFDNVGG-NISDTVISQMNEN-SH  255 (357)
T ss_dssp             HHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSC--HHHHHHHHCTTCEEEEEESCCH-HHHHHHHHTEEEE-EE
T ss_pred             HHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchH--HHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHhccC-cE
Confidence            9999998789999999999998886 9999888877655  7888888776689999999986 7889999999998 99


Q ss_pred             EEEeccCCCC-Cccccc--------cccccccceEEEeeecCCC--CCCCHHHHHHHHHcCCCCCCcceeeeeecccHHH
Q 047713          242 AVLVGVPNKD-DAFKTH--------PMNLLNERTLKGTFFGNYK--PRSDLPSVVEKYMNKELEVEKFITHTVPFSEINK  310 (329)
Q Consensus       242 vv~~g~~~~~-~~~~~~--------~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~  310 (329)
                      ++.+|..... ...+..        ..++.+++++.++....+.  ..+.++++++++.++++.+.  +..+|+|+++++
T Consensus       256 iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~  333 (357)
T 2zb4_A          256 IILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIK--ETVINGLENMGA  333 (357)
T ss_dssp             EEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCC--EEEEECGGGHHH
T ss_pred             EEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCc--cceecCHHHHHH
Confidence            9999865331 112221        1335678899887654321  12458899999999988765  345699999999


Q ss_pred             HHHHHHcCcc-eEEEEeeCC
Q 047713          311 AFDLMLAGES-IRCIIRMDG  329 (329)
Q Consensus       311 a~~~~~~~~~-~kvvv~~~~  329 (329)
                      |++.+.+++. +|+||++++
T Consensus       334 A~~~~~~~~~~gKvvi~~~~  353 (357)
T 2zb4_A          334 AFQSMMTGGNIGKQIVCISE  353 (357)
T ss_dssp             HHHHHHTTCCSBEEEEECCC
T ss_pred             HHHHHHcCCCCceEEEEEec
Confidence            9999988874 599998753

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.5e-37  Score=275.98  Aligned_cols=262  Identities=17%  Similarity=0.205  Sum_probs=199.1

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++  +++.|++||||++.+..                                           
T Consensus        58 ~~~p~v~G~E~~G~V~~~--~v~~~~vGdrV~~~~~~-------------------------------------------   92 (328)
T 1xa0_A           58 KTYPFVPGIDLAGVVVSS--QHPRFREGDEVIATGYE-------------------------------------------   92 (328)
T ss_dssp             CSSSBCCCSEEEEEEEEC--CSSSCCTTCEEEEESTT-------------------------------------------
T ss_pred             CCCCcccCcceEEEEEec--CCCCCCCCCEEEEcccc-------------------------------------------
Confidence            467999999999999995  57899999999975210                                           


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhh--hccCCCCCC-eEEEEcC-CHHHHHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATV--NVAKPKKGQ-SVAIFGL-GAVGLAAAEGARV  166 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~~g~-~VlI~Ga-g~iG~aai~la~~  166 (329)
                      .+...+|+|+||+++|++.++++|+++++++||++++++.|||.++.  ...++++|+ +|||+|+ |++|++++|+|+.
T Consensus        93 ~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~  172 (328)
T 1xa0_A           93 IGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAK  172 (328)
T ss_dssp             BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHH
T ss_pred             CCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHH
Confidence            00112479999999999999999999999999999999999998764  446889997 9999997 9999999999999


Q ss_pred             cCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          167 SGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       167 ~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .|+ +|++++++++++++++++|++.++++.+.+   .+.+++++++++|+|||++|. +.++.++++++++ |+++.+|
T Consensus       173 ~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~---~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~G  246 (328)
T 1xa0_A          173 RGY-TVEASTGKAAEHDYLRVLGAKEVLAREDVM---AERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYG-GAVAVSG  246 (328)
T ss_dssp             TTC-CEEEEESCTTCHHHHHHTTCSEEEECC------------CCSCCEEEEEECSTT-TTHHHHHHTEEEE-EEEEECS
T ss_pred             CCC-EEEEEECCHHHHHHHHHcCCcEEEecCCcH---HHHHHHhcCCcccEEEECCcH-HHHHHHHHhhccC-CEEEEEe
Confidence            999 799999999999999999999998876431   233455554589999999987 5889999999998 9999998


Q ss_pred             cCCCCCccccc-cccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-e
Q 047713          247 VPNKDDAFKTH-PMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-I  321 (329)
Q Consensus       247 ~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~  321 (329)
                      ...... .... ..++.+++++.|+.......   .+.++.+++++.++ +  ++ ++++|+|+++++|++.+++++. +
T Consensus       247 ~~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l--~~-~~~~~~l~~~~~A~~~~~~~~~~g  321 (328)
T 1xa0_A          247 LTGGAE-VPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-L--ER-IAQEISLAELPQALKRILRGELRG  321 (328)
T ss_dssp             CCSSSC-CCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-H--HH-HEEEEEGGGHHHHHHHHHHTCCCS
T ss_pred             ecCCCC-CCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-C--ce-eeeEeCHHHHHHHHHHHHcCCCCC
Confidence            754321 1221 23456889998874321110   01234444444444 3  33 3689999999999999988775 5


Q ss_pred             EEEEeeC
Q 047713          322 RCIIRMD  328 (329)
Q Consensus       322 kvvv~~~  328 (329)
                      |+||+++
T Consensus       322 Kvvv~~~  328 (328)
T 1xa0_A          322 RTVVRLA  328 (328)
T ss_dssp             EEEEECC
T ss_pred             eEEEEeC
Confidence            9999864

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.1e-37  Score=280.16  Aligned_cols=263  Identities=17%  Similarity=0.193  Sum_probs=202.2

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+++  +++.|++||||++.+..                                           
T Consensus        59 ~~~p~i~G~E~~G~V~~~--~v~~~~vGdrV~~~~~~-------------------------------------------   93 (330)
T 1tt7_A           59 REYPLILGIDAAGTVVSS--NDPRFAEGDEVIATSYE-------------------------------------------   93 (330)
T ss_dssp             SSCSEECCSEEEEEEEEC--SSTTCCTTCEEEEESTT-------------------------------------------
T ss_pred             CCCCccccceEEEEEEEc--CCCCCCCCCEEEEcccc-------------------------------------------
Confidence            367999999999999996  56899999999975310                                           


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhh--hccCCCCCC-eEEEEcC-CHHHHHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATV--NVAKPKKGQ-SVAIFGL-GAVGLAAAEGARV  166 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~~g~-~VlI~Ga-g~iG~aai~la~~  166 (329)
                      .+...+|+|+||+++|++.++++|+++++++||++++++.|||.++.  ...++++|+ +|||+|+ |++|++++|+|+.
T Consensus        94 ~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~  173 (330)
T 1tt7_A           94 LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNK  173 (330)
T ss_dssp             BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHH
T ss_pred             cCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHH
Confidence            00112479999999999999999999999999999999999998764  346789997 9999997 9999999999999


Q ss_pred             cCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          167 SGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       167 ~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .|+ +|++++++++++++++++|++.++++.+.+   ...+++++++++|+|||++|. +.++.++++++++ |+++.+|
T Consensus       174 ~Ga-~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~---~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~iv~~G  247 (330)
T 1tt7_A          174 RGY-DVVASTGNREAADYLKQLGASEVISREDVY---DGTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSG  247 (330)
T ss_dssp             HTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHC---SSCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECC
T ss_pred             CCC-EEEEEeCCHHHHHHHHHcCCcEEEECCCch---HHHHHHhhcCCccEEEECCcH-HHHHHHHHhhcCC-CEEEEEe
Confidence            999 799999999999999999999988653210   011233444489999999988 6889999999998 9999998


Q ss_pred             cCCCCCccccc-cccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-e
Q 047713          247 VPNKDDAFKTH-PMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-I  321 (329)
Q Consensus       247 ~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~  321 (329)
                      ...... .... ..++.+++++.|+.......   .+.++++++++.++++  +++++++|+|+++++|++.+.+++. +
T Consensus       248 ~~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~g  324 (330)
T 1tt7_A          248 LTGGGE-VPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQL--LTIVDREVSLEETPGALKDILQNRIQG  324 (330)
T ss_dssp             CSSCSC-EEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCS--TTSEEEEECSTTHHHHHHHTTTTCCSS
T ss_pred             cCCCCc-cCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCc--ccccceEEcHHHHHHHHHHHHcCCCCC
Confidence            754321 1221 23456889998874322110   0123444555556654  4667899999999999999988775 5


Q ss_pred             EEEEee
Q 047713          322 RCIIRM  327 (329)
Q Consensus       322 kvvv~~  327 (329)
                      |+||++
T Consensus       325 Kvvi~~  330 (330)
T 1tt7_A          325 RVIVKL  330 (330)
T ss_dssp             EEEECC
T ss_pred             eEEEeC
Confidence            998864

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=2e-35  Score=267.13  Aligned_cols=259  Identities=17%  Similarity=0.214  Sum_probs=211.2

Q ss_pred             CCCcccCCcceEEEEE--ecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           12 LFPRIFGHEAGGIVES--VGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~--vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      .+|+++|||++|++++  ||++|++|++||||++.                                             
T Consensus        69 ~~p~v~G~e~~G~~~~GvV~~~v~~~~vGdrV~~~---------------------------------------------  103 (345)
T 2j3h_A           69 AQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGI---------------------------------------------  103 (345)
T ss_dssp             -CCCCTTSBCEEEEEEEEEEECSTTCCTTCEEEEE---------------------------------------------
T ss_pred             CCCcCCCCeeecceEEEEEecCCCCCCCCCEEEee---------------------------------------------
Confidence            4689999999999999  99999999999999853                                             


Q ss_pred             eeeccccccccccEEeeecc--EEEcCC---CCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHH
Q 047713           90 IYHFVGTSTFSEYTVTHVGC--VAKINP---AAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEG  163 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~--~~~~p~---~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~l  163 (329)
                             |+|+||++++++.  ++++|+   +++++ +|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+
T Consensus       104 -------g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~  175 (345)
T 2j3h_A          104 -------VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQL  175 (345)
T ss_dssp             -------EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHH
T ss_pred             -------cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHH
Confidence                   6899999999876  999996   35555 68899999999999878899999999999987 9999999999


Q ss_pred             HHHcCCCEEEEEcCChhhHHHHH-hcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEE
Q 047713          164 ARVSGASRIIGVDLNPSRFNEAK-KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVA  242 (329)
Q Consensus       164 a~~~G~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~v  242 (329)
                      |+..|+ +|+++++++++.+.++ ++|++.++++.+.+ ++.+.+++.+++++|+|||++|. ..++.++++++++ |++
T Consensus       176 a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~-~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~  251 (345)
T 2j3h_A          176 AKMMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEES-DLTAALKRCFPNGIDIYFENVGG-KMLDAVLVNMNMH-GRI  251 (345)
T ss_dssp             HHHTTC-EEEEEESSHHHHHHHHHTSCCSEEEETTSCS-CSHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEE
T ss_pred             HHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEecCCHH-HHHHHHHHHhCCCCcEEEECCCH-HHHHHHHHHHhcC-CEE
Confidence            999999 8999999999999998 79999888876531 26677777765589999999987 6889999999998 999


Q ss_pred             EEeccCCCCC----ccccc-cccccccceEEEeeecCCCC--CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHHH
Q 047713          243 VLVGVPNKDD----AFKTH-PMNLLNERTLKGTFFGNYKP--RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLM  315 (329)
Q Consensus       243 v~~g~~~~~~----~~~~~-~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~~  315 (329)
                      +.+|......    ..... ..++.+++++.|+....+..  .+.++++++++.+|++.  +++...|+|+++++|++.+
T Consensus       252 v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~--~~~~~~~~l~~~~~A~~~~  329 (345)
T 2j3h_A          252 AVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKIT--YVEDVADGLEKAPEALVGL  329 (345)
T ss_dssp             EECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSC--CCEEEEESGGGSHHHHHHH
T ss_pred             EEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCc--CcccccCCHHHHHHHHHHH
Confidence            9998643210    11111 23456788888876543211  12378899999999775  4566789999999999999


Q ss_pred             HcCcc-eEEEEeeCC
Q 047713          316 LAGES-IRCIIRMDG  329 (329)
Q Consensus       316 ~~~~~-~kvvv~~~~  329 (329)
                      .+++. +|+|+.+++
T Consensus       330 ~~~~~~gKvvv~~~~  344 (345)
T 2j3h_A          330 FHGKNVGKQVVVVAR  344 (345)
T ss_dssp             HTTCCSSEEEEESSC
T ss_pred             HcCCCceEEEEEeCC
Confidence            98875 599998753

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=4e-35  Score=263.85  Aligned_cols=256  Identities=15%  Similarity=0.205  Sum_probs=209.5

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|.++|||++|+|++.  +|+.|++||||++.                                              
T Consensus        61 ~~~p~~~g~e~~G~Vv~~--~v~~~~vGdrV~~~----------------------------------------------   92 (333)
T 1v3u_A           61 LKEGAVMMGQQVARVVES--KNSAFPAGSIVLAQ----------------------------------------------   92 (333)
T ss_dssp             CCTTSBCCCCEEEEEEEE--SCTTSCTTCEEEEC----------------------------------------------
T ss_pred             CCCCcccccceEEEEEec--CCCCCCCCCEEEec----------------------------------------------
Confidence            357889999999999995  68899999999854                                              


Q ss_pred             eeccccccccccEEeeeccEEEcCCC----CCccc-hhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPA----APLDK-VCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGA  164 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~----~~~~~-aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la  164 (329)
                            |+|+||+++|++.++++|++    +++++ +|+++++++|||+++.+.+++++|++|||+|+ |++|++++|++
T Consensus        93 ------g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~  166 (333)
T 1v3u_A           93 ------SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIA  166 (333)
T ss_dssp             ------CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHH
T ss_pred             ------CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHH
Confidence                  58999999999999999997    88887 58999999999999878889999999999987 99999999999


Q ss_pred             HHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCC-CCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEE
Q 047713          165 RVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKD-YDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAV  243 (329)
Q Consensus       165 ~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv  243 (329)
                      +..|+ +|+++++++++.+.++++|++.+++..+ .+  +.+.+++.+.+++|++||++|. ..++.++++++++ |+++
T Consensus       167 ~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~--~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v  241 (333)
T 1v3u_A          167 KLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTVNS--LEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIA  241 (333)
T ss_dssp             HHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSCSC--HHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEE
T ss_pred             HHCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCCHHH--HHHHHHHHhCCCCeEEEECCCh-HHHHHHHHHHhcC-CEEE
Confidence            99999 8999999999999999999988888765 44  7777887766689999999986 5789999999998 9999


Q ss_pred             EeccCCCCC------ccccccccccccceEEEeeecCCCC---CCCHHHHHHHHHcCCCCCCcceeeeeecccHHHHHHH
Q 047713          244 LVGVPNKDD------AFKTHPMNLLNERTLKGTFFGNYKP---RSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDL  314 (329)
Q Consensus       244 ~~g~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~i~~a~~~  314 (329)
                      .+|......      .......++.+++++.|+....+..   .+.++++++++.++++.+..  ..+++|+++++|++.
T Consensus       242 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~l~~~~~A~~~  319 (333)
T 1v3u_A          242 ICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHE--HVTKGFENMPAAFIE  319 (333)
T ss_dssp             ECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCE--EEEECGGGHHHHHHH
T ss_pred             EEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCcc--ccccCHHHHHHHHHH
Confidence            998654311      1111123456889999876544321   23567899999999886653  346899999999999


Q ss_pred             HHcCcc-eEEEEee
Q 047713          315 MLAGES-IRCIIRM  327 (329)
Q Consensus       315 ~~~~~~-~kvvv~~  327 (329)
                      +.+++. +|+||++
T Consensus       320 ~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          320 MLNGANLGKAVVTA  333 (333)
T ss_dssp             HHTTCCSBEEEEEC
T ss_pred             HHcCCCCceEEEeC
Confidence            988764 5998864

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1.3e-35  Score=263.51  Aligned_cols=242  Identities=18%  Similarity=0.288  Sum_probs=196.3

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      +.+|.++|||++|+|+           ||||++.+                                             
T Consensus        53 ~~~p~i~G~e~~G~V~-----------GdrV~~~~---------------------------------------------   76 (302)
T 1iz0_A           53 LHPPFIPGMEVVGVVE-----------GRRYAALV---------------------------------------------   76 (302)
T ss_dssp             CCSSBCCCCEEEEEET-----------TEEEEEEC---------------------------------------------
T ss_pred             CCCCCcccceEEEEEE-----------CcEEEEec---------------------------------------------
Confidence            3679999999999997           99998652                                             


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGA  169 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~  169 (329)
                          .+|+|+||+++|++.++++|++++++++|++++++.|||+++.... +++|++|||+|+ |++|++++|+|+..|+
T Consensus        77 ----~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga  151 (302)
T 1iz0_A           77 ----PQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL  151 (302)
T ss_dssp             ----SSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC
T ss_pred             ----CCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC
Confidence                1379999999999999999999999999999999999999987677 999999999987 9999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceeeCCCC-CCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          170 SRIIGVDLNPSRFNEAKKFGVTEFVNPKD-YDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       170 ~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                       +|+++++++++.+.++++|++.++++.+ .+  +.+.+     +++|+||| +|. ..++.++++++++ |+++.+|..
T Consensus       152 -~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~--~~~~~-----~~~d~vid-~g~-~~~~~~~~~l~~~-G~~v~~g~~  220 (302)
T 1iz0_A          152 -RVLAAASRPEKLALPLALGAEEAATYAEVPE--RAKAW-----GGLDLVLE-VRG-KEVEESLGLLAHG-GRLVYIGAA  220 (302)
T ss_dssp             -EEEEEESSGGGSHHHHHTTCSEEEEGGGHHH--HHHHT-----TSEEEEEE-CSC-TTHHHHHTTEEEE-EEEEEC---
T ss_pred             -EEEEEeCCHHHHHHHHhcCCCEEEECCcchh--HHHHh-----cCceEEEE-CCH-HHHHHHHHhhccC-CEEEEEeCC
Confidence             8999999999999999999998887643 22  33332     57999999 987 6889999999998 999999875


Q ss_pred             CCCC-ccccccccccccceEEEeeecCCC-CCCCHHHHHH---HHHcCCCCCCcceeeeeecccHHHHHHHHHcCcc-eE
Q 047713          249 NKDD-AFKTHPMNLLNERTLKGTFFGNYK-PRSDLPSVVE---KYMNKELEVEKFITHTVPFSEINKAFDLMLAGES-IR  322 (329)
Q Consensus       249 ~~~~-~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~i~---~~~~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~-~k  322 (329)
                      .... .++. ..++.+++++.|+....+. ..+.++++++   ++.++++  +++++++|+++++++|++.+.+++. .|
T Consensus       221 ~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~gK  297 (302)
T 1iz0_A          221 EGEVAPIPP-LRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGREL--RPVVGPVFPFAEAEAAFRALLDRGHTGK  297 (302)
T ss_dssp             ----CCCCT-THHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTB--CCCEEEEEEGGGHHHHHHHTTCTTCCBE
T ss_pred             CCCCCCcCH-HHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCc--ccccceEEcHHHHHHHHHHHHcCCCCce
Confidence            4421 1221 2345788999987754321 1245788888   8888876  4568899999999999999988765 58


Q ss_pred             EEEee
Q 047713          323 CIIRM  327 (329)
Q Consensus       323 vvv~~  327 (329)
                      +++++
T Consensus       298 vvv~~  302 (302)
T 1iz0_A          298 VVVRL  302 (302)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            88863

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.96  E-value=1.9e-29  Score=272.80  Aligned_cols=225  Identities=18%  Similarity=0.239  Sum_probs=185.6

Q ss_pred             ccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE
Q 047713           97 STFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGV  175 (329)
Q Consensus        97 g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~  175 (329)
                      |+|+||+++|++.++++|+++++++||+++++++|||+++...+++++|++|||+|+ |++|++++|+|+..|+ +|+++
T Consensus      1620 G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat 1698 (2512)
T 2vz8_A         1620 EGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTT 1698 (2512)
T ss_dssp             CCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred             CceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEE
Confidence            799999999999999999999999999999999999999888899999999999975 9999999999999999 89999


Q ss_pred             cCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          176 DLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       176 ~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +.++++.+++++    +|+++++++.+.+  +.+.+++.+++ ++|+|||++| .+.++.++++++++ |+++.+|....
T Consensus      1699 ~~s~~k~~~l~~~~~~lga~~v~~~~~~~--~~~~i~~~t~g~GvDvVld~~g-~~~l~~~l~~L~~~-Gr~V~iG~~~~ 1774 (2512)
T 2vz8_A         1699 VGSAEKRAYLQARFPQLDETCFANSRDTS--FEQHVLRHTAGKGVDLVLNSLA-EEKLQASVRCLAQH-GRFLEIGKFDL 1774 (2512)
T ss_dssp             ESCHHHHHHHHHHCTTCCSTTEEESSSSH--HHHHHHHTTTSCCEEEEEECCC-HHHHHHHHTTEEEE-EEEEECCCHHH
T ss_pred             eCChhhhHHHHhhcCCCCceEEecCCCHH--HHHHHHHhcCCCCceEEEECCC-chHHHHHHHhcCCC-cEEEEeecccc
Confidence            999999999886    7889888877654  88889998887 9999999996 57899999999998 99999985432


Q ss_pred             CCccccccccccccceEEEeeecCCCC--CCCHHHHHHHHH----cCCCCCCcceeeeeecccHHHHHHHHHcCcce-EE
Q 047713          251 DDAFKTHPMNLLNERTLKGTFFGNYKP--RSDLPSVVEKYM----NKELEVEKFITHTVPFSEINKAFDLMLAGESI-RC  323 (329)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~----~~~l~~~~~~~~~~~l~~i~~a~~~~~~~~~~-kv  323 (329)
                      ..........+.+++++.+........  .+.+.++++++.    ++.+  .++++++|+++++++|++.+.++++. |+
T Consensus      1775 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l--~p~i~~~f~l~ei~eA~~~l~~g~~~GKv 1852 (2512)
T 2vz8_A         1775 SNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVV--QPLKCTVFPRTKVEAAFRYMAQGKHIGKV 1852 (2512)
T ss_dssp             HTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCS--CCCCEEEEESSTHHHHHHHHHTTCCSSEE
T ss_pred             cccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCc--CCCcceEecHHHHHHHHHhhhccCccceE
Confidence            211122233456888888876543221  123555555554    4544  45678999999999999999988764 99


Q ss_pred             EEeeC
Q 047713          324 IIRMD  328 (329)
Q Consensus       324 vv~~~  328 (329)
                      |+.++
T Consensus      1853 Vi~~~ 1857 (2512)
T 2vz8_A         1853 VIQVR 1857 (2512)
T ss_dssp             EEECS
T ss_pred             EEECC
Confidence            99875

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.88  E-value=1.5e-22  Score=168.20  Aligned_cols=184  Identities=20%  Similarity=0.255  Sum_probs=135.3

Q ss_pred             ccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH
Q 047713          108 GCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK  186 (329)
Q Consensus       108 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~  186 (329)
                      +.++++|++++++++|++++++.|||+++.+..++++|++|||+|+ |++|++++++++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            5688999999999999999999999999878889999999999985 9999999999999999 8999999999999999


Q ss_pred             hcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccc
Q 047713          187 KFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNER  265 (329)
Q Consensus       187 ~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~  265 (329)
                      ++|++.+++..+.+  +.+.+.+.+.+ ++|++||++|. ..++.++++++++ |+++.+|..............+.+++
T Consensus        81 ~~g~~~~~d~~~~~--~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  156 (198)
T 1pqw_A           81 RLGVEYVGDSRSVD--FADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSA  156 (198)
T ss_dssp             TTCCSEEEETTCST--HHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTC
T ss_pred             HcCCCEEeeCCcHH--HHHHHHHHhCCCCCeEEEECCch-HHHHHHHHHhccC-CEEEEEcCCCCcCcCcCChhHhcCCc
Confidence            99998888776554  77777777765 89999999975 6889999999998 99999987542111111222345777


Q ss_pred             eEEEeee------cCCCCCCCHHHHHHHHHcCCCCCC
Q 047713          266 TLKGTFF------GNYKPRSDLPSVVEKYMNKELEVE  296 (329)
Q Consensus       266 ~~~g~~~------~~~~~~~~~~~~i~~~~~~~l~~~  296 (329)
                      ++.+...      ......+.++++++++.+|++.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  193 (198)
T 1pqw_A          157 SFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  193 (198)
T ss_dssp             EEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             EEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence            7775432      110012457889999999987654

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.22  E-value=2.1e-12  Score=110.31  Aligned_cols=175  Identities=12%  Similarity=0.028  Sum_probs=110.2

Q ss_pred             cCCCCCEEeecC-------CCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeeccccccccccEEee
Q 047713           34 DLQPGDHVLPVF-------TGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTH  106 (329)
Q Consensus        34 ~~~~Gd~V~~~~-------~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~  106 (329)
                      .+++||+|++.+       ...||.|.+|+.|..+.|......                          .|+..+++.++
T Consensus         3 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~~--------------------------~G~~~~~~~~~   56 (248)
T 2yvl_A            3 SFKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKP--------------------------EGVKINGFEVY   56 (248)
T ss_dssp             CCCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTCC--------------------------TTEEETTEEEE
T ss_pred             cCCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCCC--------------------------CCCEEEEEEEe
Confidence            389999999988       678999999999988888753211                          12222333333


Q ss_pred             eccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH
Q 047713          107 VGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK  186 (329)
Q Consensus       107 ~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~  186 (329)
                      ......+++... ...+.+..+...+  .+.....+.++++||..|+| .|..++.+++. +. +|++++.+++..+.++
T Consensus        57 ~p~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~  130 (248)
T 2yvl_A           57 RPTLEEIILLGF-ERKTQIIYPKDSF--YIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYKTAQ  130 (248)
T ss_dssp             CCCHHHHHHHTS-CCSSCCCCHHHHH--HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHHHHH
T ss_pred             CCCHHHHHHhcC-cCCCCcccchhHH--HHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHHHHH
Confidence            222222221111 1111111122222  24566788899999999998 69999999988 65 9999999999888776


Q ss_pred             hc----CCceeeCCCCCCchHHHHHHhhh-c-CCccEEEEecCCH-HHHHHHHHhhccCCeEEEEecc
Q 047713          187 KF----GVTEFVNPKDYDKPVQQVIADMT-N-GGVDRSVECTGSV-QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       187 ~l----g~~~~~~~~~~~~~~~~~~~~~~-~-~~~d~Vid~~g~~-~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +.    +...-+.....+  +    .+.. . +++|+|+...+.+ ..++.+.+.|+++ |+++....
T Consensus       131 ~~~~~~~~~~~~~~~~~d--~----~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  191 (248)
T 2yvl_A          131 KNLKKFNLGKNVKFFNVD--F----KDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP  191 (248)
T ss_dssp             HHHHHTTCCTTEEEECSC--T----TTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred             HHHHHcCCCCcEEEEEcC--h----hhcccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            53    321101111111  1    1112 2 3799999877655 6788999999998 99988754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.92  E-value=1.8e-11  Score=112.07  Aligned_cols=183  Identities=15%  Similarity=0.130  Sum_probs=127.4

Q ss_pred             cccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeecc
Q 047713           15 RIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFV   94 (329)
Q Consensus        15 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~   94 (329)
                      ...|++.++.|.++|++++.+.+|+.++......                        ++.                ...
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~------------------------~~~----------------~~~  114 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKK------------------------AYD----------------RAA  114 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH------------------------HHH----------------HHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHH------------------------HHH----------------HHH
Confidence            3678899999999999999999999975321000                        000                011


Q ss_pred             ccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhcc---CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCE
Q 047713           95 GTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVA---KPKKGQSVAIFGLGAVGLAAAEGARVSGASR  171 (329)
Q Consensus        95 ~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~g~~VlI~Gag~iG~aai~la~~~G~~~  171 (329)
                      ..|++++|+..+...++++|++++.+.++. ..+..++|.++....   .-.+|++|+|+|+|.+|.++++.++..|+++
T Consensus       115 ~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~  193 (404)
T 1gpj_A          115 RLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRA  193 (404)
T ss_dssp             HHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSE
T ss_pred             HcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCE
Confidence            236788888888888899998887776543 456777877643211   1257999999999999999999999999878


Q ss_pred             EEEEcCChhhH-HHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHH--HHHHh--h--ccCCeEEEE
Q 047713          172 IIGVDLNPSRF-NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMI--SAFEC--V--HDGWGVAVL  244 (329)
Q Consensus       172 vv~~~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~--~~~~~--l--~~~~G~vv~  244 (329)
                      |++++++.++. ++++++|++ +++..    ++.+.+     .++|+|++++|.+..+.  ..++.  +  +++ +.++.
T Consensus       194 V~v~~r~~~ra~~la~~~g~~-~~~~~----~l~~~l-----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v~  262 (404)
T 1gpj_A          194 VLVANRTYERAVELARDLGGE-AVRFD----ELVDHL-----ARSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPILI  262 (404)
T ss_dssp             EEEECSSHHHHHHHHHHHTCE-ECCGG----GHHHHH-----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEE
T ss_pred             EEEEeCCHHHHHHHHHHcCCc-eecHH----hHHHHh-----cCCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEEE
Confidence            99999998886 678888875 33321    133322     25899999998654331  34444  3  445 66677


Q ss_pred             eccCC
Q 047713          245 VGVPN  249 (329)
Q Consensus       245 ~g~~~  249 (329)
                      ++...
T Consensus       263 vdia~  267 (404)
T 1gpj_A          263 IDIAN  267 (404)
T ss_dssp             EECCS
T ss_pred             EEccC
Confidence            76543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.61  E-value=9.4e-08  Score=86.06  Aligned_cols=96  Identities=24%  Similarity=0.225  Sum_probs=73.5

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce--eeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE--FVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      +++|+|+|+|++|+++++.++.+|+ +|+++++++++.+.+++++...  +++...  .++.+.++     ++|+||+++
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS--AEIETAVA-----EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH--HHHHHHHH-----TCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCH--HHHHHHHc-----CCCEEEECC
Confidence            4899999999999999999999999 8999999999999988876543  222211  11322222     589999999


Q ss_pred             CCHHH------HHHHHHhhccCCeEEEEeccCC
Q 047713          223 GSVQA------MISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       223 g~~~~------~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +.+..      .+..++.++++ |.++.++...
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~  270 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQ  270 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTT
T ss_pred             CcCCCCCCeecCHHHHhhCCCC-CEEEEEecCC
Confidence            86542      56678889998 9999998643

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.54  E-value=4.4e-07  Score=82.36  Aligned_cols=144  Identities=15%  Similarity=0.186  Sum_probs=93.5

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCC---------------C--chHHH
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDY---------------D--KPVQQ  205 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~---------------~--~~~~~  205 (329)
                      ++++|+|+|+|.+|++++++|+.+|+ +|++++.++++.+.++++|++.+ ++..+.               +  .....
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 79999999999888888998654 222110               0  00112


Q ss_pred             HHHhhhcCCccEEEEec---CCHH--H-HHHHHHhhccCCeEEEEeccCCC-CCccc-cccccccccceEEEeeecCCCC
Q 047713          206 VIADMTNGGVDRSVECT---GSVQ--A-MISAFECVHDGWGVAVLVGVPNK-DDAFK-THPMNLLNERTLKGTFFGNYKP  277 (329)
Q Consensus       206 ~~~~~~~~~~d~Vid~~---g~~~--~-~~~~~~~l~~~~G~vv~~g~~~~-~~~~~-~~~~~~~~~~~~~g~~~~~~~~  277 (329)
                      .+.+... ++|+||+++   |.+.  . ....++.++++ +.++.++...+ ..... ....+..+++++.+......  
T Consensus       250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p~--  325 (384)
T 1l7d_A          250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPS--  325 (384)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGGG--
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCcc--
Confidence            2333332 599999999   5322  2 26778889998 99999985322 21111 11223456777777543211  


Q ss_pred             CCCHHHHHHHHHcCCC
Q 047713          278 RSDLPSVVEKYMNKEL  293 (329)
Q Consensus       278 ~~~~~~~i~~~~~~~l  293 (329)
                       .....+.+++.++.+
T Consensus       326 -~~~~~a~~l~~~~~~  340 (384)
T 1l7d_A          326 -RVAADASPLFAKNLL  340 (384)
T ss_dssp             -GGHHHHHHHHHHHHH
T ss_pred             -hhHHHHHHHHHHhHH
Confidence             224447777766544

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.43  E-value=1.1e-06  Score=79.56  Aligned_cols=97  Identities=19%  Similarity=0.195  Sum_probs=73.4

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      +|++|+|+|+|.+|+++++.++.+|+ +|+++++++++.+.+++ +|.....+..+. .++.+.++     ++|+|++++
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~-~~l~~~l~-----~aDvVi~~~  239 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSSA-YELEGAVK-----RADLVIGAV  239 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECCH-HHHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCCH-HHHHHHHc-----CCCEEEECC
Confidence            58999999999999999999999999 89999999999888776 676532221111 11222222     489999999


Q ss_pred             CCHHH------HHHHHHhhccCCeEEEEeccC
Q 047713          223 GSVQA------MISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       223 g~~~~------~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +.+..      ....++.++++ +.++.++..
T Consensus       240 ~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~  270 (377)
T 2vhw_A          240 LVPGAKAPKLVSNSLVAHMKPG-AVLVDIAID  270 (377)
T ss_dssp             CCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGG
T ss_pred             CcCCCCCcceecHHHHhcCCCC-cEEEEEecC
Confidence            76543      56788889998 999999853

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.39  E-value=2.2e-06  Score=78.09  Aligned_cols=125  Identities=19%  Similarity=0.215  Sum_probs=84.0

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee-CCCC----C-------CchH----HHHH
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV-NPKD----Y-------DKPV----QQVI  207 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~----~-------~~~~----~~~~  207 (329)
                      ++.+|+|+|+|.+|++++++|+.+|+ +|++++.++++.+.++++|++.+. +..+    .       ..++    ...+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            58899999999999999999999999 899999999999989999986542 1110    0       0001    1123


Q ss_pred             HhhhcCCccEEEEecCCH-----HHH-HHHHHhhccCCeEEEEeccCC-CCCccccc--cccccccceEEEee
Q 047713          208 ADMTNGGVDRSVECTGSV-----QAM-ISAFECVHDGWGVAVLVGVPN-KDDAFKTH--PMNLLNERTLKGTF  271 (329)
Q Consensus       208 ~~~~~~~~d~Vid~~g~~-----~~~-~~~~~~l~~~~G~vv~~g~~~-~~~~~~~~--~~~~~~~~~~~g~~  271 (329)
                      .+... ++|+||++++.+     ..+ ...++.++++ +.++.++... +.......  +....+++++.|..
T Consensus       250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCS
T ss_pred             HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeC
Confidence            33322 589999996332     222 5788889998 9999998642 22222111  12446788888754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.33  E-value=2.4e-06  Score=77.10  Aligned_cols=98  Identities=24%  Similarity=0.251  Sum_probs=70.0

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      ++++|+|+|+|.+|+++++.++.+|+ +|+++++++++.+.+++ +|.....+..+. .++.+.++     ++|+|++++
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~-~~l~~~~~-----~~DvVi~~~  237 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTATE-ANIKKSVQ-----HADLLIGAV  237 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECCH-HHHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCCH-HHHHHHHh-----CCCEEEECC
Confidence            46899999999999999999999999 89999999998887765 776532222211 11222222     589999999


Q ss_pred             CCHHH------HHHHHHhhccCCeEEEEeccCC
Q 047713          223 GSVQA------MISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       223 g~~~~------~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      |.+..      .+..++.++++ |.++.++...
T Consensus       238 g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~  269 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQ  269 (369)
T ss_dssp             C-------CCSCHHHHTTSCTT-CEEEECC---
T ss_pred             CCCccccchhHHHHHHHhhcCC-CEEEEEecCC
Confidence            86532      56778889997 9999997643

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.27  E-value=2.8e-06  Score=78.89  Aligned_cols=93  Identities=27%  Similarity=0.394  Sum_probs=77.1

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      ..+|++|+|+|.|.+|..+++.++.+|+ +|++++.++++.+.++++|++ +++       +.+.+     .++|+|+++
T Consensus       271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~~-------l~e~l-----~~aDvVi~a  336 (494)
T 3ce6_A          271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VVT-------VEEAI-----GDADIVVTA  336 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC-------HHHHG-----GGCSEEEEC
T ss_pred             CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Eec-------HHHHH-----hCCCEEEEC
Confidence            6789999999999999999999999999 899999999998888899985 221       32221     258999999


Q ss_pred             cCCHHHHH-HHHHhhccCCeEEEEeccCC
Q 047713          222 TGSVQAMI-SAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       222 ~g~~~~~~-~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +|....+. ..++.++++ |+++.++...
T Consensus       337 tgt~~~i~~~~l~~mk~g-gilvnvG~~~  364 (494)
T 3ce6_A          337 TGNKDIIMLEHIKAMKDH-AILGNIGHFD  364 (494)
T ss_dssp             SSSSCSBCHHHHHHSCTT-CEEEECSSSG
T ss_pred             CCCHHHHHHHHHHhcCCC-cEEEEeCCCC
Confidence            98766565 788899998 9999998643

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.13  E-value=7.5e-06  Score=70.73  Aligned_cols=105  Identities=20%  Similarity=0.204  Sum_probs=72.0

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      +.....+.++++||..|+|. |..++.+++..+ ..+|++++.+++..+.+++.    +...-+.....+  +.+.   +
T Consensus       104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~---~  177 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD--ISEG---F  177 (277)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC--GGGC---C
T ss_pred             HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC--HHHc---c
Confidence            45567888999999999876 888889998854 34999999999888777653    431111111111  1111   1


Q ss_pred             hcCCccEEEEecCCH-HHHHHHHHhhccCCeEEEEecc
Q 047713          211 TNGGVDRSVECTGSV-QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       211 ~~~~~d~Vid~~g~~-~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ..+.+|+|+-....+ ..+..+.+.|+++ |.++....
T Consensus       178 ~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  214 (277)
T 1o54_A          178 DEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP  214 (277)
T ss_dssp             SCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred             cCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            223799998665544 6788889999998 99888753

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.05  E-value=2.3e-06  Score=73.50  Aligned_cols=95  Identities=15%  Similarity=0.104  Sum_probs=68.8

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      .++.+||..|+|. |..+..+++.. +. +|++++.+++..+.+++.+....+...+.. .+     ....+.+|+|+..
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~-~~-----~~~~~~fD~v~~~  155 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RL-----PFSDTSMDAIIRI  155 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTT-SC-----SBCTTCEEEEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcchh-hC-----CCCCCceeEEEEe
Confidence            5788999999987 99999999986 56 899999999999998876542211111110 00     1122379999954


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          222 TGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      . ....+....+.|+++ |+++....
T Consensus       156 ~-~~~~l~~~~~~L~pg-G~l~~~~~  179 (269)
T 1p91_A          156 Y-APCKAEELARVVKPG-GWVITATP  179 (269)
T ss_dssp             S-CCCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             C-ChhhHHHHHHhcCCC-cEEEEEEc
Confidence            4 556789999999998 99888754

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.02  E-value=1.7e-05  Score=68.58  Aligned_cols=100  Identities=16%  Similarity=0.172  Sum_probs=73.9

Q ss_pred             ccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhcCC
Q 047713          139 VAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       139 ~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      .+++++|++||.+|+|+.++.++.+|+..|+ +|++++.+++..+.+++.    |.+.+ .....+  .    .++..+.
T Consensus       117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v-~~v~gD--a----~~l~d~~  188 (298)
T 3fpf_A          117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGV-NVITGD--E----TVIDGLE  188 (298)
T ss_dssp             HTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSE-EEEESC--G----GGGGGCC
T ss_pred             HcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCe-EEEECc--h----hhCCCCC
Confidence            4688999999999998878888888888888 999999999998887764    44211 111122  1    1223358


Q ss_pred             ccEEEEecCCH---HHHHHHHHhhccCCeEEEEecc
Q 047713          215 VDRSVECTGSV---QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       215 ~d~Vid~~g~~---~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ||+|+.....+   ..++...+.|+++ |+++....
T Consensus       189 FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~  223 (298)
T 3fpf_A          189 FDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTY  223 (298)
T ss_dssp             CSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             cCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcC
Confidence            99999665433   5788899999998 99988754

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.99  E-value=2.8e-05  Score=60.88  Aligned_cols=92  Identities=21%  Similarity=0.211  Sum_probs=64.4

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceeeCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      ...++.+|+|.|+|.+|+.+++.++..|. .|++++.++++.+.++ +.|...+.. ...+   ...+.+....++|+||
T Consensus        15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~~-d~~~---~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVVG-DAAE---FETLKECGMEKADMVF   89 (155)
T ss_dssp             --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEES-CTTS---HHHHHTTTGGGCSEEE
T ss_pred             cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEEe-cCCC---HHHHHHcCcccCCEEE
Confidence            34568899999999999999999999998 8999999988887776 666643321 1111   1233333223799999


Q ss_pred             EecCCHHHHHHHHHhhcc
Q 047713          220 ECTGSVQAMISAFECVHD  237 (329)
Q Consensus       220 d~~g~~~~~~~~~~~l~~  237 (329)
                      .+++.......+...++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           90 AFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             ECSSCHHHHHHHHHHHHH
T ss_pred             EEeCCcHHHHHHHHHHHH
Confidence            999886665555555554

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.94  E-value=4.3e-06  Score=74.43  Aligned_cols=107  Identities=17%  Similarity=0.179  Sum_probs=66.9

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCC---------------ceeeCCCCC
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKFGV---------------TEFVNPKDY  199 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~lg~---------------~~~~~~~~~  199 (329)
                      +.....+.+|++||-.|+|. |..++.+++..|. .+|++++.+++..+.+++...               ..+ .....
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v-~~~~~  174 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV-DFIHK  174 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCE-EEEES
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCce-EEEEC
Confidence            34556788999999999876 8888888887663 489999999988877665211               111 00000


Q ss_pred             CchHHHHHHhhhcCCccEEEEecCCH-HHHHHHHHhhccCCeEEEEecc
Q 047713          200 DKPVQQVIADMTNGGVDRSVECTGSV-QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       200 ~~~~~~~~~~~~~~~~d~Vid~~g~~-~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +  ..+....+..+.+|+|+-....+ ..+..+.++|+++ |.++.+..
T Consensus       175 d--~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  220 (336)
T 2b25_A          175 D--ISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV  220 (336)
T ss_dssp             C--TTCCC-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred             C--hHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            1  10000111223699988554433 3578888999998 99987654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.93  E-value=8.3e-05  Score=54.85  Aligned_cols=93  Identities=18%  Similarity=0.194  Sum_probs=63.0

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +.+|+|+|+|.+|..+++.+...|...|+++++++++.+.+...+..... +..+    . ..+.+.. .++|+||++++
T Consensus         5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~----~-~~~~~~~-~~~d~vi~~~~   78 (118)
T 3ic5_A            5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKD----E-AGLAKAL-GGFDAVISAAP   78 (118)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTC----H-HHHHHHT-TTCSEEEECSC
T ss_pred             cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCC----H-HHHHHHH-cCCCEEEECCC
Confidence            56899999999999999999999933899999999988887766654432 2222    1 2333332 26999999997


Q ss_pred             CHHHHHHHHHhhccCCeEEEE
Q 047713          224 SVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       224 ~~~~~~~~~~~l~~~~G~vv~  244 (329)
                      ..........+...+ -.++.
T Consensus        79 ~~~~~~~~~~~~~~g-~~~~~   98 (118)
T 3ic5_A           79 FFLTPIIAKAAKAAG-AHYFD   98 (118)
T ss_dssp             GGGHHHHHHHHHHTT-CEEEC
T ss_pred             chhhHHHHHHHHHhC-CCEEE
Confidence            644444444444544 44443

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.92  E-value=5.7e-05  Score=68.13  Aligned_cols=101  Identities=19%  Similarity=0.275  Sum_probs=72.5

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCC----C------C----CchH----HH
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPK----D------Y----DKPV----QQ  205 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~----~------~----~~~~----~~  205 (329)
                      ++.+|+|+|+|.+|+.++++|+.+|+ +|++.+.++++.+.++++|++.+....    +      +    .+.+    ..
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            57899999999999999999999999 899999999999999999886332110    0      0    0001    11


Q ss_pred             HHHhhhcCCccEEEEecCCHH------HHHHHHHhhccCCeEEEEecc
Q 047713          206 VIADMTNGGVDRSVECTGSVQ------AMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       206 ~~~~~~~~~~d~Vid~~g~~~------~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+.+.. .+.|+||.++..+.      ..+..++.++++ ..++.++.
T Consensus       268 ~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~  313 (405)
T 4dio_A          268 LVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAV  313 (405)
T ss_dssp             HHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTG
T ss_pred             HHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeC
Confidence            222222 16999999864221      236778889998 99999975

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.81  E-value=8.1e-05  Score=66.60  Aligned_cols=102  Identities=24%  Similarity=0.285  Sum_probs=73.0

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCC------CC----ch-H---HHHHHh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKD------YD----KP-V---QQVIAD  209 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~------~~----~~-~---~~~~~~  209 (329)
                      ++.+|+|+|+|.+|+.+++.|+.+|+ +|++.+.++++.+.++++|++.+....+      +.    .. .   ...+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            67899999999999999999999999 8999999999999999998864321000      00    00 0   112222


Q ss_pred             hhcCCccEEEEecCCHH------HHHHHHHhhccCCeEEEEeccC
Q 047713          210 MTNGGVDRSVECTGSVQ------AMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       210 ~~~~~~d~Vid~~g~~~------~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      .. .++|+||.++..+.      ..+..++.++++ ..++.++..
T Consensus       262 ~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d  304 (381)
T 3p2y_A          262 AI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGE  304 (381)
T ss_dssp             HH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGG
T ss_pred             HH-hcCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCC
Confidence            22 36999999863221      236778889997 999999753

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.77  E-value=7.7e-05  Score=63.33  Aligned_cols=103  Identities=19%  Similarity=0.184  Sum_probs=71.9

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      +.....+.++++||-.|+|. |..++.+++..+ ..+|++++.+++..+.+++.    |....+.....+  +.    +.
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~----~~  157 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKD--IY----EG  157 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSC--GG----GC
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECc--hh----hc
Confidence            45667889999999999875 888889998853 34999999999888776653    443211111112  11    22


Q ss_pred             hcC-CccEEEEecCCH-HHHHHHHHhhccCCeEEEEec
Q 047713          211 TNG-GVDRSVECTGSV-QAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       211 ~~~-~~d~Vid~~g~~-~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ... .+|+|+-....+ ..++.+.+.|+++ |+++.+.
T Consensus       158 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  194 (255)
T 3mb5_A          158 IEEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYT  194 (255)
T ss_dssp             CCCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             cCCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            223 799998766543 3788999999998 9998774

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.75  E-value=6.5e-05  Score=63.79  Aligned_cols=105  Identities=14%  Similarity=0.073  Sum_probs=72.2

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhc-----CCceeeCCCCCCchHHHHHHh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKKF-----GVTEFVNPKDYDKPVQQVIAD  209 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~l-----g~~~~~~~~~~~~~~~~~~~~  209 (329)
                      +.....+.++++||..|+|. |..++.+++..+ ..+|++++.+++..+.+++.     |...+- ....+  +.+.  .
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~-~~~~d--~~~~--~  161 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVR-FHLGK--LEEA--E  161 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEE-EEESC--GGGC--C
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEE-EEECc--hhhc--C
Confidence            45566788999999999885 888899998853 33999999999988877654     532211 11111  1110  0


Q ss_pred             hhcCCccEEEEecCCH-HHHHHHHHhhccCCeEEEEecc
Q 047713          210 MTNGGVDRSVECTGSV-QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       210 ~~~~~~d~Vid~~g~~-~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +..+.+|+|+...... ..+..+.+.|+++ |+++.+..
T Consensus       162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  199 (258)
T 2pwy_A          162 LEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYLP  199 (258)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             CCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            1123799998766544 6788899999998 99888753

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.74  E-value=1.7e-05  Score=61.39  Aligned_cols=105  Identities=14%  Similarity=0.167  Sum_probs=70.0

Q ss_pred             ccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCceeeCCCCCCchHHHHH
Q 047713          129 ISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTEFVNPKDYDKPVQQVI  207 (329)
Q Consensus       129 ~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~  207 (329)
                      .++++.++ ..+....+++|+|+|+|.+|.+.++.++..|. .|+..++++++.+. .++++.... ...+    +.+.+
T Consensus         6 ~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~~-~~~~----~~~~~   78 (144)
T 3oj0_A            6 VSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEYV-LIND----IDSLI   78 (144)
T ss_dssp             CSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEEE-ECSC----HHHHH
T ss_pred             ccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCceE-eecC----HHHHh
Confidence            34555553 23333348999999999999999998888898 58888888887654 667775322 1211    33333


Q ss_pred             HhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          208 ADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       208 ~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .     ++|+|+.+++.+..+.. .+.++++ +.++.++.
T Consensus        79 ~-----~~Divi~at~~~~~~~~-~~~l~~g-~~vid~~~  111 (144)
T 3oj0_A           79 K-----NNDVIITATSSKTPIVE-ERSLMPG-KLFIDLGN  111 (144)
T ss_dssp             H-----TCSEEEECSCCSSCSBC-GGGCCTT-CEEEECCS
T ss_pred             c-----CCCEEEEeCCCCCcEee-HHHcCCC-CEEEEccC
Confidence            2     48999999986533222 2567776 77777765

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.67  E-value=0.00053  Score=55.00  Aligned_cols=87  Identities=18%  Similarity=0.295  Sum_probs=63.5

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHHHHHhhhc-CCccEEEEe
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQVIADMTN-GGVDRSVEC  221 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~-~~~d~Vid~  221 (329)
                      +++|+|.|.|.+|..+++.++.. |. .|++++.++++.+.+++.|...+. +..+     .+.+.+.++ .++|+||.+
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~-----~~~l~~~~~~~~ad~vi~~  112 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATD-----PDFWERILDTGHVKLVLLA  112 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTC-----HHHHHTBCSCCCCCEEEEC
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCC-----HHHHHhccCCCCCCEEEEe
Confidence            66899999999999999999988 98 799999999999988888876543 2222     123444422 379999999


Q ss_pred             cCCHHHHHHHHHhhcc
Q 047713          222 TGSVQAMISAFECVHD  237 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~  237 (329)
                      ++...........++.
T Consensus       113 ~~~~~~~~~~~~~~~~  128 (183)
T 3c85_A          113 MPHHQGNQTALEQLQR  128 (183)
T ss_dssp             CSSHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHH
Confidence            9876554444444443

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.66  E-value=0.00018  Score=65.07  Aligned_cols=94  Identities=21%  Similarity=0.350  Sum_probs=72.8

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      .-.|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|... .     +  +.+.+     ...|+|+.|
T Consensus       217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v-~-----~--Leeal-----~~ADIVi~a  282 (435)
T 3gvp_A          217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL-V-----K--LNEVI-----RQVDIVITC  282 (435)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-----C--HHHHT-----TTCSEEEEC
T ss_pred             eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe-c-----c--HHHHH-----hcCCEEEEC
Confidence            4579999999999999999999999999 8999999888776666666532 1     1  32222     248999999


Q ss_pred             cCCHHHHH-HHHHhhccCCeEEEEeccCCC
Q 047713          222 TGSVQAMI-SAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       222 ~g~~~~~~-~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      .|....+. ..++.++++ +.++.++....
T Consensus       283 tgt~~lI~~e~l~~MK~g-ailINvgrg~~  311 (435)
T 3gvp_A          283 TGNKNVVTREHLDRMKNS-CIVCNMGHSNT  311 (435)
T ss_dssp             SSCSCSBCHHHHHHSCTT-EEEEECSSTTT
T ss_pred             CCCcccCCHHHHHhcCCC-cEEEEecCCCc
Confidence            88655554 788899998 99988876544

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.60  E-value=0.00023  Score=61.25  Aligned_cols=105  Identities=20%  Similarity=0.237  Sum_probs=71.1

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhc-----C--CceeeCCCCCCchHHHHH
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKKF-----G--VTEFVNPKDYDKPVQQVI  207 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~l-----g--~~~~~~~~~~~~~~~~~~  207 (329)
                      +.....+.++++||..|+| .|..++.+++..+ ..+|++++.+++..+.+++.     |  ...+- ....+  ..+. 
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~-~~~~d--~~~~-  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWR-LVVSD--LADS-  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEE-EECSC--GGGC-
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEE-EEECc--hHhc-
Confidence            4556778999999999988 6888889998753 33999999999888776653     3  21111 11111  1110 


Q ss_pred             HhhhcCCccEEEEecCCH-HHHHHHHHhhccCCeEEEEecc
Q 047713          208 ADMTNGGVDRSVECTGSV-QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       208 ~~~~~~~~d~Vid~~g~~-~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                       ....+.+|+|+.....+ ..+..+.+.|+++ |.++.+..
T Consensus       166 -~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  204 (280)
T 1i9g_A          166 -ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA  204 (280)
T ss_dssp             -CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             -CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence             01123799998765543 6788899999998 99888754

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.56  E-value=0.0013  Score=50.29  Aligned_cols=94  Identities=11%  Similarity=0.101  Sum_probs=65.1

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      .++|+|.|.|.+|..+++.++..|. .|++++.++++.+.+++.|...+.-... +   .+.+++..-.++|+|+-+++.
T Consensus         7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~gd~~-~---~~~l~~a~i~~ad~vi~~~~~   81 (140)
T 3fwz_A            7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLGNAA-N---EEIMQLAHLECAKWLILTIPN   81 (140)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEESCTT-S---HHHHHHTTGGGCSEEEECCSC
T ss_pred             CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEECCCC-C---HHHHHhcCcccCCEEEEECCC
Confidence            4689999999999999999999999 8999999999999998888765442211 1   123343322379999999986


Q ss_pred             HHHHH---HHHHhhccCCeEEEE
Q 047713          225 VQAMI---SAFECVHDGWGVAVL  244 (329)
Q Consensus       225 ~~~~~---~~~~~l~~~~G~vv~  244 (329)
                      .....   ...+.+.+. .+++.
T Consensus        82 ~~~n~~~~~~a~~~~~~-~~iia  103 (140)
T 3fwz_A           82 GYEAGEIVASARAKNPD-IEIIA  103 (140)
T ss_dssp             HHHHHHHHHHHHHHCSS-SEEEE
T ss_pred             hHHHHHHHHHHHHHCCC-CeEEE
Confidence            54322   223334444 55544

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.51  E-value=0.00028  Score=61.40  Aligned_cols=93  Identities=16%  Similarity=0.242  Sum_probs=69.1

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      -+|++|+|+|.|.+|.++++.++.+|+ +|++.+++.++.+.++++|+..+ +..    ++.    ++. ...|+|+.++
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-~~~----~l~----~~l-~~aDvVi~~~  221 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEPF-HIS----KAA----QEL-RDVDVCINTI  221 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEEE-EGG----GHH----HHT-TTCSEEEECC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeec-Chh----hHH----HHh-cCCCEEEECC
Confidence            468999999999999999999999999 89999999888777777886532 111    122    221 2589999998


Q ss_pred             CCHHHHHHHHHhhccCCeEEEEecc
Q 047713          223 GSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       223 g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +..-.-...++.++++ +.++.++.
T Consensus       222 p~~~i~~~~l~~mk~~-~~lin~ar  245 (293)
T 3d4o_A          222 PALVVTANVLAEMPSH-TFVIDLAS  245 (293)
T ss_dssp             SSCCBCHHHHHHSCTT-CEEEECSS
T ss_pred             ChHHhCHHHHHhcCCC-CEEEEecC
Confidence            6422223566778887 88888875

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.48  E-value=0.00028  Score=65.03  Aligned_cols=91  Identities=21%  Similarity=0.339  Sum_probs=69.9

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      -.|++++|+|+|.+|.++++.++..|+ +|++++.++.+.+.+...+.+ +.+..           +. ...+|+|+++.
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~le-----------e~-~~~aDvVi~at  328 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLE-----------DV-VSEADIFVTTT  328 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGG-----------GT-TTTCSEEEECS
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHH-----------HH-HHhcCEEEeCC
Confidence            469999999999999999999999999 899999998887777766653 21111           11 12589999999


Q ss_pred             CCHHHHH-HHHHhhccCCeEEEEeccC
Q 047713          223 GSVQAMI-SAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       223 g~~~~~~-~~~~~l~~~~G~vv~~g~~  248 (329)
                      |....+. ..++.++++ +.++.+|..
T Consensus       329 G~~~vl~~e~l~~mk~g-aiVvNaG~~  354 (488)
T 3ond_A          329 GNKDIIMLDHMKKMKNN-AIVCNIGHF  354 (488)
T ss_dssp             SCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred             CChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence            8655553 377888887 888888764

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.44  E-value=0.00085  Score=60.92  Aligned_cols=93  Identities=22%  Similarity=0.279  Sum_probs=71.0

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      .-.|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|... .+       +.+.++     ..|+|+.+
T Consensus       244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v~-------LeElL~-----~ADIVv~a  309 (464)
T 3n58_A          244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-VT-------LDDAAS-----TADIVVTT  309 (464)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-CC-------HHHHGG-----GCSEEEEC
T ss_pred             cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-cc-------HHHHHh-----hCCEEEEC
Confidence            3579999999999999999999999999 8999988887766666666532 11       332222     47999999


Q ss_pred             cCCHHHH-HHHHHhhccCCeEEEEeccCC
Q 047713          222 TGSVQAM-ISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       222 ~g~~~~~-~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      .|....+ ...+..++++ +.++-++...
T Consensus       310 tgt~~lI~~e~l~~MK~G-AILINvGRgd  337 (464)
T 3n58_A          310 TGNKDVITIDHMRKMKDM-CIVGNIGHFD  337 (464)
T ss_dssp             CSSSSSBCHHHHHHSCTT-EEEEECSSST
T ss_pred             CCCccccCHHHHhcCCCC-eEEEEcCCCC
Confidence            8865454 5778889997 8888887644

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.42  E-value=0.0017  Score=49.51  Aligned_cols=78  Identities=13%  Similarity=0.217  Sum_probs=57.4

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      ..+|+|.|+|.+|..+++.+...|. .|++++.++++.+.+++.+...+.-... +   ...+++..-.++|+||.+++.
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~gd~~-~---~~~l~~~~~~~~d~vi~~~~~   80 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVIADPT-D---ESFYRSLDLEGVSAVLITGSD   80 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEECCTT-C---HHHHHHSCCTTCSEEEECCSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEECCCC-C---HHHHHhCCcccCCEEEEecCC
Confidence            4689999999999999999999999 8999999999998888877644332111 1   223444422379999999986


Q ss_pred             HHH
Q 047713          225 VQA  227 (329)
Q Consensus       225 ~~~  227 (329)
                      ...
T Consensus        81 ~~~   83 (141)
T 3llv_A           81 DEF   83 (141)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            433

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.32  E-value=0.0006  Score=59.44  Aligned_cols=94  Identities=14%  Similarity=0.227  Sum_probs=68.9

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      -+|.+|+|+|.|.+|.++++.++.+|+ +|++.+++.++.+.+.++|... ++..    ++    .++. ...|+|+.++
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~-~~~~----~l----~~~l-~~aDvVi~~~  223 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVP-FHTD----EL----KEHV-KDIDICINTI  223 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCEE-EEGG----GH----HHHS-TTCSEEEECC
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCeE-Echh----hH----HHHh-hCCCEEEECC
Confidence            468999999999999999999999999 8999999988877777777642 2111    12    2222 2589999998


Q ss_pred             CCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          223 GSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       223 g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +..-.-...++.++++ +.++.++..
T Consensus       224 p~~~i~~~~~~~mk~g-~~lin~a~g  248 (300)
T 2rir_A          224 PSMILNQTVLSSMTPK-TLILDLASR  248 (300)
T ss_dssp             SSCCBCHHHHTTSCTT-CEEEECSST
T ss_pred             ChhhhCHHHHHhCCCC-CEEEEEeCC
Confidence            7522223456778887 888888753

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.22  E-value=0.00095  Score=50.84  Aligned_cols=76  Identities=14%  Similarity=0.319  Sum_probs=53.5

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +++|+|+|+|.+|..+++.+...|. .|+.++.++++.+.+++.+...+.. ...+   .+.+.+...+++|+|+.+++.
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~-d~~~---~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIA-NATE---ENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEEEEC-CTTC---HHHHHTTTGGGCSEEEECCCS
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEEEEe-CCCC---HHHHHhcCCCCCCEEEECCCC
Confidence            5679999999999999999999998 7888888888777666655533221 1111   123333322379999999986


Q ss_pred             H
Q 047713          225 V  225 (329)
Q Consensus       225 ~  225 (329)
                      +
T Consensus        81 ~   81 (144)
T 2hmt_A           81 N   81 (144)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.17  E-value=0.0033  Score=53.49  Aligned_cols=79  Identities=13%  Similarity=0.233  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-CH--HHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCC---c-eeeCCCCCCchHHHHHHhhhc
Q 047713          144 KGQSVAIFGL-GA--VGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGV---T-EFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~--iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~---~-~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .|+++||+|+ |.  +|.+++..+...|+ +|+.++++++..+.++    +++.   . ...|..+. +++.+.++++..
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~   83 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTND-AEIETCFASIKE   83 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSS-HHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCH-HHHHHHHHHHHH
Confidence            4789999975 55  99999998888899 7888887765444433    3332   1 12233332 234444444332


Q ss_pred             --CCccEEEEecCC
Q 047713          213 --GGVDRSVECTGS  224 (329)
Q Consensus       213 --~~~d~Vid~~g~  224 (329)
                        +++|+++++.|.
T Consensus        84 ~~g~id~li~~Ag~   97 (266)
T 3oig_A           84 QVGVIHGIAHCIAF   97 (266)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HhCCeeEEEEcccc
Confidence              369999998873

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.08  E-value=0.0021  Score=52.48  Aligned_cols=102  Identities=20%  Similarity=0.264  Sum_probs=69.2

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-ee-eCCCCCCchHHHHHHh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVT-EF-VNPKDYDKPVQQVIAD  209 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~-~~-~~~~~~~~~~~~~~~~  209 (329)
                      +.....+.++++||-.|+|. |..++.+|+. +. +|++++.+++..+.+++    +|.. .+ +...+    ..+.+..
T Consensus        47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d----~~~~~~~  119 (204)
T 3njr_A           47 TLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGT----APAALAD  119 (204)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC----TTGGGTT
T ss_pred             HHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCc----hhhhccc
Confidence            34556788899999999875 8888888888 66 89999999998877654    3543 11 11111    1111111


Q ss_pred             hhcCCccEEEEecCC-HHHHHHHHHhhccCCeEEEEecc
Q 047713          210 MTNGGVDRSVECTGS-VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       210 ~~~~~~d~Vid~~g~-~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                        .+.+|+|+...+. ...++.+.+.|+++ |+++....
T Consensus       120 --~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  155 (204)
T 3njr_A          120 --LPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAV  155 (204)
T ss_dssp             --SCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEEC
T ss_pred             --CCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEec
Confidence              1269999865443 23778888999998 99887653

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.08  E-value=0.0036  Score=50.36  Aligned_cols=100  Identities=19%  Similarity=0.163  Sum_probs=64.4

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCC---------CEEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHHHHHhh
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGA---------SRIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQVIADM  210 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~---------~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~  210 (329)
                      .++++++||..|+|+ |..++.+++..+.         .+|++++.++...     +.....+ ..+-.+......+.+.
T Consensus        19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~   92 (196)
T 2nyu_A           19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILEV   92 (196)
T ss_dssp             CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHHh
Confidence            367899999999987 9999999998874         4899999887431     1111222 1111111233344444


Q ss_pred             hcC-CccEEEE-----ecCCH------------HHHHHHHHhhccCCeEEEEecc
Q 047713          211 TNG-GVDRSVE-----CTGSV------------QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       211 ~~~-~~d~Vid-----~~g~~------------~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .++ .+|+|+.     +++..            ..+..+.++|+++ |+++....
T Consensus        93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  146 (196)
T 2nyu_A           93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKTW  146 (196)
T ss_dssp             SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEec
Confidence            444 8999993     33321            4567788899998 99887643

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.06  E-value=0.00053  Score=55.99  Aligned_cols=133  Identities=14%  Similarity=0.214  Sum_probs=75.4

Q ss_pred             cccccEE-eeeccEEEcCCCCCccchhcccccccchhhhhhhccC--CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEE
Q 047713           98 TFSEYTV-THVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAK--PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIG  174 (329)
Q Consensus        98 ~~a~~~~-v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~--~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~  174 (329)
                      .|.+|.. .+....+.+++.+++....- +.    .. .+.....  +.++.+||-.|+|. |..+..+++ .+..+|++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~----~~-~~~~~l~~~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~   88 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-QT----TQ-LAMLGIERAMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLA   88 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCH-HH----HH-HHHHHHHHHCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCC-cc----HH-HHHHHHHHhccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEE
Confidence            5677766 66677788887765554311 11    10 1111111  56789999998875 777777776 45559999


Q ss_pred             EcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH---HHHHHHHHhhccCCeEEEEec
Q 047713          175 VDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV---QAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       175 ~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~---~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ++.+++..+.+++.    +... +.....+  +    .+...+.+|+|+-.....   ..+..+.++|+++ |.++...
T Consensus        89 vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d--~----~~~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  159 (205)
T 3grz_A           89 TDISDESMTAAEENAALNGIYD-IALQKTS--L----LADVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIFSG  159 (205)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCC-CEEEESS--T----TTTCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEEEE
T ss_pred             EECCHHHHHHHHHHHHHcCCCc-eEEEecc--c----cccCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            99999888776653    4321 1111111  1    111234799998655322   1234455578887 8888753

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=96.99  E-value=0.0028  Score=54.25  Aligned_cols=101  Identities=19%  Similarity=0.293  Sum_probs=69.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCcee---eCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTEF---VNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+. ++++|....   .|..+. ++..+.+++...  |++|
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~-~~v~~~~~~~~~~~G~iD  105 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANL-AELDRLYEKVKAEAGRID  105 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCH-HHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCCC
Confidence            5899999986 9999999999999999 89999999888764 566765332   233322 223333343332  3799


Q ss_pred             EEEEecCCH----------H---------------HHHHHHHhhccCCeEEEEecc
Q 047713          217 RSVECTGSV----------Q---------------AMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       217 ~Vid~~g~~----------~---------------~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +.++++|..          +               ..+.++..++.+ |+++.++.
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS  160 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGS  160 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECC
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEee
Confidence            999998742          1               223344456665 88888864

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.97  E-value=0.0032  Score=55.10  Aligned_cols=103  Identities=16%  Similarity=0.168  Sum_probs=71.6

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.....+.++.+||-+|+|. |..+..+++..|+ +|++++.+++..+.+++.    |....+.....+  +    .++ 
T Consensus        82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~----~~~-  152 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG--W----EDF-  152 (318)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC--G----GGC-
T ss_pred             HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC--h----HHC-
Confidence            45666788999999999876 8888899987788 999999999988877654    322111111111  1    122 


Q ss_pred             cCCccEEEEe-----cC---CHHHHHHHHHhhccCCeEEEEeccC
Q 047713          212 NGGVDRSVEC-----TG---SVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       212 ~~~~d~Vid~-----~g---~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      ++.+|+|+..     .+   ....+..+.++|+++ |+++.....
T Consensus       153 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  196 (318)
T 2fk8_A          153 AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSSV  196 (318)
T ss_dssp             CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEEE
T ss_pred             CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEec
Confidence            2579999865     32   245677888899998 998887543

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.96  E-value=0.00088  Score=55.88  Aligned_cols=102  Identities=17%  Similarity=0.131  Sum_probs=67.6

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhh-cCC
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMT-NGG  214 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~-~~~  214 (329)
                      ....++.+||..|+| .|..++.+++..+..+|++++.+++..+.+++.    |...-+.....+  ....+.... .+.
T Consensus        50 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~~  126 (233)
T 2gpy_A           50 LKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGD--ALQLGEKLELYPL  126 (233)
T ss_dssp             HHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC--GGGSHHHHTTSCC
T ss_pred             HhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC--HHHHHHhcccCCC
Confidence            344578899999987 688889999987433999999999888776653    542111111111  222122222 247


Q ss_pred             ccEEEEecCC---HHHHHHHHHhhccCCeEEEEe
Q 047713          215 VDRSVECTGS---VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       215 ~d~Vid~~g~---~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      +|+|+.....   ...+..+.+.|+++ |.++..
T Consensus       127 fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~  159 (233)
T 2gpy_A          127 FDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSD  159 (233)
T ss_dssp             EEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             ccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence            9999866543   45678888899998 988775

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.96  E-value=0.0039  Score=52.55  Aligned_cols=78  Identities=13%  Similarity=0.104  Sum_probs=54.1

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce---eeCCCCCCchHHHHHHhhhc--CCccEE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVDRS  218 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d~V  218 (329)
                      +++|||+|+ +++|.+++..+...|+ +|+.+++++++.+.+.+-+...   ..|..+. ++..+.+.+...  +++|+.
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~v~~~~~~~g~iDiL   79 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADP-LTLKKFVEYAMEKLQRIDVL   79 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSH-HHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            368999986 9999999999999999 8999999988877665544322   2233222 223344433332  379999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      ++++|.
T Consensus        80 VNNAG~   85 (247)
T 3ged_A           80 VNNACR   85 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998873

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.95  E-value=0.0016  Score=54.55  Aligned_cols=102  Identities=14%  Similarity=0.114  Sum_probs=68.7

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhh---
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMT---  211 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~---  211 (329)
                      ....++++||..|+| .|..+..+++..+ ..+|++++.+++..+.+++.    |....+.....+  ..+.+.++.   
T Consensus        56 ~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d--~~~~~~~~~~~~  132 (239)
T 2hnk_A           56 TKISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGS--ALETLQVLIDSK  132 (239)
T ss_dssp             HHHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHCS
T ss_pred             HHhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC--HHHHHHHHHhhc
Confidence            344578899999987 5888999999874 23999999999887776653    543212112222  333333321   


Q ss_pred             -----------c-CCccEEEEecCCH---HHHHHHHHhhccCCeEEEEe
Q 047713          212 -----------N-GGVDRSVECTGSV---QAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       212 -----------~-~~~d~Vid~~g~~---~~~~~~~~~l~~~~G~vv~~  245 (329)
                                 . +.+|+|+......   ..+..+.++|+++ |.++..
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~  180 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIAD  180 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence                       2 5799998765433   5568888899998 988864

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.92  E-value=0.00081  Score=54.85  Aligned_cols=104  Identities=15%  Similarity=0.160  Sum_probs=70.8

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.....++++++||-.|+|. |..++.+++.....+|++++.+++..+.+++    .+...+- ....+  ..   ....
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~-~~~~d--~~---~~~~  104 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVT-LVEAF--AP---EGLD  104 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEE-EEECC--TT---TTCT
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEE-EEeCC--hh---hhhh
Confidence            34566788999999999874 8888999988644599999999998877765    3432111 00001  10   0011


Q ss_pred             c-CCccEEEEecC---CHHHHHHHHHhhccCCeEEEEecc
Q 047713          212 N-GGVDRSVECTG---SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~-~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      . +.+|+|+....   ....++.+.+.|+++ |+++....
T Consensus       105 ~~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (204)
T 3e05_A          105 DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAV  143 (204)
T ss_dssp             TSCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             cCCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEec
Confidence            1 36999987654   346778888999998 99988643

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.91  E-value=0.0042  Score=49.03  Aligned_cols=104  Identities=18%  Similarity=0.224  Sum_probs=70.3

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eeeCCCCCCchHHHHHHhhh
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVT-EFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~  211 (329)
                      .....+.++++||..|+|. |..+..+++..+..+|++++.+++..+.+++    .+.. .++...+    ....+.. .
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d----~~~~~~~-~   91 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQG----APRAFDD-V   91 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECC----TTGGGGG-C
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecc----hHhhhhc-c
Confidence            4455778899999999885 8889999988744499999999988877764    3543 2211111    1111111 1


Q ss_pred             cCCccEEEEecCC--HHHHHHHHHhhccCCeEEEEecc
Q 047713          212 NGGVDRSVECTGS--VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~~~~d~Vid~~g~--~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+.+|+|+.....  ...++.+.+.|+++ |+++....
T Consensus        92 ~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  128 (178)
T 3hm2_A           92 PDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAV  128 (178)
T ss_dssp             CSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEEC
T ss_pred             CCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEee
Confidence            1479999865533  23688899999998 99887653

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.91  E-value=0.00072  Score=56.56  Aligned_cols=103  Identities=18%  Similarity=0.168  Sum_probs=70.3

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.+...+.++++||..|+| .|..++.+++..+ .+|++++.+++..+.+++    .+...+ .....+  .   ...+.
T Consensus        83 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~d--~---~~~~~  154 (235)
T 1jg1_A           83 MLEIANLKPGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNV-HVILGD--G---SKGFP  154 (235)
T ss_dssp             HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESC--G---GGCCG
T ss_pred             HHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEECC--c---ccCCC
Confidence            3455678899999999988 6899999999877 489999999988777655    343221 111111  1   11122


Q ss_pred             cC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          212 NG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+ ++|+|+.........+...+.|+++ |+++..-.
T Consensus       155 ~~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~~~  190 (235)
T 1jg1_A          155 PKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIPVG  190 (235)
T ss_dssp             GGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             CCCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            23 5999997765544556778899998 98876643

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.89  E-value=0.0053  Score=51.58  Aligned_cols=78  Identities=27%  Similarity=0.395  Sum_probs=52.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCcee-eCCCCCCchHHHHHHhhhc--CCccEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEF-VNPKDYDKPVQQVIADMTN--GGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~-~~~~~~~~~~~~~~~~~~~--~~~d~V  218 (329)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+. +++.+.+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVADP-ASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTCH-HHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            3688999986 9999999999888999 888888888776543 44553222 233322 123333333322  369999


Q ss_pred             EEecC
Q 047713          219 VECTG  223 (329)
Q Consensus       219 id~~g  223 (329)
                      |++.|
T Consensus        82 vn~Ag   86 (245)
T 1uls_A           82 VHYAG   86 (245)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.88  E-value=0.0013  Score=55.24  Aligned_cols=78  Identities=21%  Similarity=0.285  Sum_probs=51.6

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-ceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV-TEFVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      -+|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+..+.-.. ....|..+. ++..+.+.++  +++|+.++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~--g~iDiLVN   84 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITDS-QRLQRLFEAL--PRLDVLVN   84 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTCH-HHHHHHHHHC--SCCSEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCCH-HHHHHHHHhc--CCCCEEEE
Confidence            36999999986 9999999999999999 89999888766543211111 112233332 1233333322  47999999


Q ss_pred             ecCC
Q 047713          221 CTGS  224 (329)
Q Consensus       221 ~~g~  224 (329)
                      +.|.
T Consensus        85 NAGi   88 (242)
T 4b79_A           85 NAGI   88 (242)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9883

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.87  E-value=0.0065  Score=51.26  Aligned_cols=79  Identities=20%  Similarity=0.254  Sum_probs=52.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-e--eCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE-F--VNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+ ++++... .  .|..+. +++.+.+++...  +++|
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~id   82 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSE-ADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCH-HHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4688999986 9999999998888899 899998888766543 4444322 1  222221 123333333322  3699


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|++.|.
T Consensus        83 ~lv~~Ag~   90 (253)
T 1hxh_A           83 VLVNNAGI   90 (253)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.86  E-value=0.0057  Score=53.05  Aligned_cols=104  Identities=14%  Similarity=0.181  Sum_probs=72.8

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.....++++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    |...-+.....+  +    .++ 
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~----~~~-  134 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG--W----EEF-  134 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC--G----GGC-
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC--H----HHc-
Confidence            45667789999999999875 8889999998886 899999999888776653    432111111111  1    222 


Q ss_pred             cCCccEEEEecCC---------------HHHHHHHHHhhccCCeEEEEeccCC
Q 047713          212 NGGVDRSVECTGS---------------VQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       212 ~~~~d~Vid~~g~---------------~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      .+.+|+|+-....               ...+..+.++|+++ |+++......
T Consensus       135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~~  186 (302)
T 3hem_A          135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTITI  186 (302)
T ss_dssp             CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEEC
T ss_pred             CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEec
Confidence            4589999854321               35678888899998 9998876543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.85  E-value=0.0039  Score=52.08  Aligned_cols=78  Identities=15%  Similarity=0.223  Sum_probs=52.0

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc---eeeCCCCCCchHHHHHHhhhc--CCccE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVT---EFVNPKDYDKPVQQVIADMTN--GGVDR  217 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~---~~~~~~~~~~~~~~~~~~~~~--~~~d~  217 (329)
                      ++++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+. +++..   ...|..+. ++..+.+.+...  +++|+
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHH-EDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSH-HHHHHHHHHHHHHHCSCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCH-HHHHHHHHHHHHhcCCCcE
Confidence            578999986 9999999998888999 8999999888766543 33321   12233322 123333333322  37999


Q ss_pred             EEEecCC
Q 047713          218 SVECTGS  224 (329)
Q Consensus       218 Vid~~g~  224 (329)
                      +|++.|.
T Consensus        81 lvnnAg~   87 (235)
T 3l6e_A           81 VLHCAGT   87 (235)
T ss_dssp             EEEECCC
T ss_pred             EEECCCC
Confidence            9999884

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.84  E-value=0.0022  Score=58.27  Aligned_cols=90  Identities=23%  Similarity=0.350  Sum_probs=68.4

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      -.|.+|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|....      +  +.+.++     ..|+|+.+.
T Consensus       209 L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~------s--L~eal~-----~ADVVilt~  274 (436)
T 3h9u_A          209 IAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL------L--VEDVVE-----EAHIFVTTT  274 (436)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC------C--HHHHTT-----TCSEEEECS
T ss_pred             ccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec------C--HHHHHh-----hCCEEEECC
Confidence            469999999999999999999999999 89999998887777777775321      1  333222     479999888


Q ss_pred             CCHHHHH-HHHHhhccCCeEEEEecc
Q 047713          223 GSVQAMI-SAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       223 g~~~~~~-~~~~~l~~~~G~vv~~g~  247 (329)
                      +....+. ..++.++++ ..++.++.
T Consensus       275 gt~~iI~~e~l~~MK~g-AIVINvgR  299 (436)
T 3h9u_A          275 GNDDIITSEHFPRMRDD-AIVCNIGH  299 (436)
T ss_dssp             SCSCSBCTTTGGGCCTT-EEEEECSS
T ss_pred             CCcCccCHHHHhhcCCC-cEEEEeCC
Confidence            7544443 566778887 88888774

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.79  E-value=0.007  Score=51.23  Aligned_cols=78  Identities=19%  Similarity=0.322  Sum_probs=54.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.    +++.|....   .|..+. ++..+.+++...  +
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~-~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKK-KDVEEFVRRTFETYS   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            4899999986 9999999999889999 89999998877653    344554332   233332 234444443332  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++++++|
T Consensus        84 ~iDiLVNNAG   93 (254)
T 4fn4_A           84 RIDVLCNNAG   93 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999987

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.79  E-value=0.0067  Score=51.41  Aligned_cols=78  Identities=19%  Similarity=0.301  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc-----CCc-e--eeCCCCCCchHHHHHHhhhcC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF-----GVT-E--FVNPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l-----g~~-~--~~~~~~~~~~~~~~~~~~~~~  213 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+ +++     +.. .  ..|..+. +++.+.+.+....
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~   83 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREP-GDIDRLFEKARDL   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCH-HHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCH-HHHHHHHHHHHHh
Confidence            4689999986 9999999998888999 888888887765432 222     211 1  1233322 1233444443333


Q ss_pred             -CccEEEEecC
Q 047713          214 -GVDRSVECTG  223 (329)
Q Consensus       214 -~~d~Vid~~g  223 (329)
                       ++|++|++.|
T Consensus        84 ~gid~lv~~Ag   94 (260)
T 2z1n_A           84 GGADILVYSTG   94 (260)
T ss_dssp             TCCSEEEECCC
T ss_pred             cCCCEEEECCC
Confidence             4999999987

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.78  E-value=0.007  Score=51.34  Aligned_cols=78  Identities=19%  Similarity=0.231  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC--Cce-eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFG--VTE-FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg--~~~-~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+ +++.  ... ..|..+. +++.+.+++...  +++|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-~~v~~~~~~~~~~~g~iD   88 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTKR-ASVDAAMQKAIDALGGFD   88 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTCH-HHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4789999986 9999999999888999 898888888776544 3342  211 1233322 123333333222  3699


Q ss_pred             EEEEecC
Q 047713          217 RSVECTG  223 (329)
Q Consensus       217 ~Vid~~g  223 (329)
                      ++|++.|
T Consensus        89 ~lv~~Ag   95 (263)
T 3ak4_A           89 LLCANAG   95 (263)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.78  E-value=0.0093  Score=51.59  Aligned_cols=79  Identities=19%  Similarity=0.271  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-CH--HHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCcee--eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GA--VGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTEF--VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~--iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~~--~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|+++||+|+ |.  +|.+++..+...|+ +|+.++++++..+.++    +.+....  .|..+. ++..+.+++...  
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~  107 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADA-ASIDAVFETLEKKW  107 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCH-HHHHHHHHHHHHHT
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCH-HHHHHHHHHHHHhc
Confidence            4789999986 55  99999998888999 7888888765443332    3342222  233332 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|+++|.
T Consensus       108 g~iD~lVnnAG~  119 (293)
T 3grk_A          108 GKLDFLVHAIGF  119 (293)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999999884

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.77  E-value=0.004  Score=55.27  Aligned_cols=49  Identities=35%  Similarity=0.443  Sum_probs=42.2

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE  192 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~  192 (329)
                      -+|++|.|.|.|.+|+.+++.++.+|+ +|++.+.++.+.++.++++++.
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~  221 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTA  221 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEE
Confidence            479999999999999999999999999 8888888877766777777643

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.76  E-value=0.0069  Score=51.11  Aligned_cols=81  Identities=16%  Similarity=0.203  Sum_probs=52.0

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc----C--Cc-eeeCCCCCC-chHHHHHHhhh-
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF----G--VT-EFVNPKDYD-KPVQQVIADMT-  211 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l----g--~~-~~~~~~~~~-~~~~~~~~~~~-  211 (329)
                      -.|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+. ++    +  .. ...|....+ ++..+.+.+.. 
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            35889999986 9999999998888999 8999988887765432 22    1  11 122331112 12333333332 


Q ss_pred             -cCCccEEEEecCC
Q 047713          212 -NGGVDRSVECTGS  224 (329)
Q Consensus       212 -~~~~d~Vid~~g~  224 (329)
                       .+++|++|++.|.
T Consensus        89 ~~g~id~lv~nAg~  102 (252)
T 3f1l_A           89 NYPRLDGVLHNAGL  102 (252)
T ss_dssp             HCSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence             2379999999884

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.76  E-value=0.0098  Score=49.99  Aligned_cols=78  Identities=24%  Similarity=0.363  Sum_probs=53.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCceee---CCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTEFV---NPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~~~---~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+. .++++.....   |..+. ++..+.+.+...  +++|
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id   82 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDP-GSVKALFAEIQALTGGID   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCH-HHHHHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHHCCCCC
Confidence            4789999986 9999999999999999 89999888877654 4455543322   22221 123333333322  3699


Q ss_pred             EEEEecC
Q 047713          217 RSVECTG  223 (329)
Q Consensus       217 ~Vid~~g  223 (329)
                      ++|++.|
T Consensus        83 ~lv~nAg   89 (247)
T 3rwb_A           83 ILVNNAS   89 (247)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.76  E-value=0.0044  Score=52.27  Aligned_cols=102  Identities=12%  Similarity=0.103  Sum_probs=68.2

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhcC-C
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTNG-G  214 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~-~  214 (329)
                      ...++.+||-+|+|. |..++.+|+.++ ..+|++++.+++..+.+++.    |...-+.....+  ..+.+...... .
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d--~~~~l~~~~~~~~  136 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGP--ALQSLESLGECPA  136 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHTCCSCCC
T ss_pred             hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHhcCCCCC
Confidence            445788999999874 888889998764 34999999999888776653    543211122222  44444444333 7


Q ss_pred             ccEEEEecC---CHHHHHHHHHhhccCCeEEEEec
Q 047713          215 VDRSVECTG---SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       215 ~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|+|+-...   ....++.+.++|+++ |.++.-.
T Consensus       137 fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~  170 (248)
T 3tfw_A          137 FDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDN  170 (248)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEEC
T ss_pred             eEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeC
Confidence            999983222   235678888999998 9887643

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.76  E-value=0.0075  Score=52.71  Aligned_cols=92  Identities=15%  Similarity=0.112  Sum_probs=63.0

Q ss_pred             CeEEEEcCCHHHHHHHHHHH--HcCCCEEEEEcCChhh--HHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEE
Q 047713          146 QSVAIFGLGAVGLAAAEGAR--VSGASRIIGVDLNPSR--FNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVE  220 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~--~~G~~~vv~~~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid  220 (329)
                      -+|.|+|+|.+|...+..+.  .-+.+.+.+++.++++  .+.++++|.....     +  ..+.+.+.+.. ++|+||+
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~-----~--~~e~ll~~~~~~~iDvV~~   77 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY-----A--GVEGLIKLPEFADIDFVFD   77 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES-----S--HHHHHHHSGGGGGEEEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc-----C--CHHHHHhccCCCCCcEEEE
Confidence            47889999999998888774  3466455566666555  5667788864221     1  22333333333 7999999


Q ss_pred             ecCCHHHHHHHHHhhcc--CCeEEEEe
Q 047713          221 CTGSVQAMISAFECVHD--GWGVAVLV  245 (329)
Q Consensus       221 ~~g~~~~~~~~~~~l~~--~~G~vv~~  245 (329)
                      +++...+.+.+..+++.  + .++++.
T Consensus        78 atp~~~h~~~a~~al~a~~G-k~Vi~e  103 (312)
T 1nvm_B           78 ATSASAHVQNEALLRQAKPG-IRLIDL  103 (312)
T ss_dssp             CSCHHHHHHHHHHHHHHCTT-CEEEEC
T ss_pred             CCChHHHHHHHHHHHHhCCC-CEEEEc
Confidence            99977777888888887  7 777664

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.75  E-value=0.0064  Score=51.26  Aligned_cols=79  Identities=18%  Similarity=0.249  Sum_probs=51.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-c-----C-Cc-e--eeCCCCCCchHHHHHHhhhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-F-----G-VT-E--FVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-l-----g-~~-~--~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .++++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+ +     + .. .  ..|..+. ++..+.+.+...
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~   83 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDC-TKADTEIKDIHQ   83 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCH-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCH-HHHHHHHHHHHH
Confidence            4789999986 9999999998888899 89999888877654322 1     2 11 1  1233332 123333333322


Q ss_pred             --CCccEEEEecCC
Q 047713          213 --GGVDRSVECTGS  224 (329)
Q Consensus       213 --~~~d~Vid~~g~  224 (329)
                        +++|++|++.|.
T Consensus        84 ~~g~iD~lvnnAg~   97 (250)
T 3nyw_A           84 KYGAVDILVNAAAM   97 (250)
T ss_dssp             HHCCEEEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence              379999999984

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.74  E-value=0.024  Score=42.56  Aligned_cols=76  Identities=20%  Similarity=0.316  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceee-CCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTEFV-NPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      +.+|+|+|+|.+|...++.+...|. .|+.++.++++.+.+++ ++...+. +..+    . ..+.+..-.++|+||.++
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~----~-~~l~~~~~~~~d~vi~~~   77 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVINGDCTK----I-KTLEDAGIEDADMYIAVT   77 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEESCTTS----H-HHHHHTTTTTCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEEcCCCC----H-HHHHHcCcccCCEEEEee
Confidence            3578999999999999998888898 89999998888776653 5654322 2211    1 223332223799999999


Q ss_pred             CCHH
Q 047713          223 GSVQ  226 (329)
Q Consensus       223 g~~~  226 (329)
                      +...
T Consensus        78 ~~~~   81 (140)
T 1lss_A           78 GKEE   81 (140)
T ss_dssp             SCHH
T ss_pred             CCch
Confidence            7654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.73  E-value=0.0067  Score=50.67  Aligned_cols=74  Identities=19%  Similarity=0.258  Sum_probs=50.8

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEEEE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRSVE  220 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~Vid  220 (329)
                      ++++||+|+ |.+|.+++..+...|+ +|+.+++++++  ..++++... ..|..+.  +..+.+.+...  +++|++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLEKD--DPKGLVKRALEALGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTTTS--CHHHHHHHHHHHHTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCchH--HHHHHHHHHHHHcCCCCEEEE
Confidence            578999986 9999999999988998 78888887765  334455322 2243332  24444444322  37999999


Q ss_pred             ecC
Q 047713          221 CTG  223 (329)
Q Consensus       221 ~~g  223 (329)
                      +.|
T Consensus        77 ~Ag   79 (239)
T 2ekp_A           77 AAA   79 (239)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.73  E-value=0.015  Score=48.12  Aligned_cols=103  Identities=14%  Similarity=0.091  Sum_probs=67.8

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHh----cCCc-eeeCCCCCCchHHHHHHhh
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVS--GASRIIGVDLNPSRFNEAKK----FGVT-EFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~--G~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~  210 (329)
                      ...+.+++.+||-.|+| .|..++.+|+.+  +. +|++++.+++..+.+++    .|.. .-+.....+  ..+.+..+
T Consensus        50 ~~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd--a~~~l~~~  125 (221)
T 3dr5_A           50 ATTNGNGSTGAIAITPA-AGLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR--PLDVMSRL  125 (221)
T ss_dssp             HHSCCTTCCEEEEESTT-HHHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC--HHHHGGGS
T ss_pred             HhhCCCCCCCEEEEcCC-chHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC--HHHHHHHh
Confidence            33444556699988887 488899999976  44 99999999988776654    4443 222222222  44444333


Q ss_pred             hcCCccEEEEecCC---HHHHHHHHHhhccCCeEEEEe
Q 047713          211 TNGGVDRSVECTGS---VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       211 ~~~~~d~Vid~~g~---~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      ..+.||+||-....   ...++.+.++|+++ |.++.-
T Consensus       126 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d  162 (221)
T 3dr5_A          126 ANDSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLA  162 (221)
T ss_dssp             CTTCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEET
T ss_pred             cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEe
Confidence            34589999854322   34678888999997 888763

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.72  E-value=0.0096  Score=51.12  Aligned_cols=79  Identities=18%  Similarity=0.226  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HH----HHHhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-FN----EAKKFGVTEF---VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-~~----~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +++++||+|+ |++|.+++..+...|+ +|+.++++.++ .+    .+++.+....   .|..+. +++.+.+.+...  
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVV-EDIVRMFEEAVKIF  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4789999986 9999999999988999 78887776543 22    2344454321   233221 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus       106 g~iD~lv~~Ag~  117 (283)
T 1g0o_A          106 GKLDIVCSNSGV  117 (283)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            369999999873

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.71  E-value=0.0062  Score=52.21  Aligned_cols=79  Identities=20%  Similarity=0.272  Sum_probs=51.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+. +++.+.+++...  +
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQP-DQVRGMLDQMTGELG  108 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            4789999986 9999999998888999 888888887665432    2333221   2233332 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus       109 ~iD~lvnnAg~  119 (276)
T 3r1i_A          109 GIDIAVCNAGI  119 (276)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.71  E-value=0.0095  Score=50.44  Aligned_cols=79  Identities=23%  Similarity=0.336  Sum_probs=54.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCceee---CCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEFV---NPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~~---~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.    +++.|.....   |..+. ++..+.+.+...  +
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~-~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDE-LAIEAAFSKLDAEGI   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCH-HHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCH-HHHHHHHHHHHHHCC
Confidence            4899999986 9999999999999999 89999998876543    3444543322   22222 234444444433  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+.++++|.
T Consensus        86 ~iDiLVNNAG~   96 (255)
T 4g81_D           86 HVDILINNAGI   96 (255)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999999883

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.69  E-value=0.0027  Score=54.21  Aligned_cols=79  Identities=19%  Similarity=0.179  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTN--GGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~--~~~d~Vi  219 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.++++.++.+.+..-... ...|..+. +++.+.+.+...  +++|++|
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDVTDK-YTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCTTCH-HHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecCCCH-HHHHHHHHHHHHHCCCCCEEE
Confidence            3689999986 9999999999888999 788888887765433211111 12233322 123333333322  3799999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      ++.|.
T Consensus        93 nnAg~   97 (266)
T 3p19_A           93 NNAGM   97 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99884

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.69  E-value=0.0087  Score=52.48  Aligned_cols=78  Identities=14%  Similarity=0.209  Sum_probs=52.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCC--c---eeeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGV--T---EFVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~--~---~~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .+++|||+|+ |++|.+++..+...|+ +|+.+++++++.+.+.    ..+.  .   ...|..+. +++.+.+.+... 
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~   84 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASR-EGFKMAADEVEAR   84 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCH-HHHHHHHHHHHHh
Confidence            4789999986 9999999999888999 8999988887765432    2232  1   12233322 123334433322 


Q ss_pred             -CCccEEEEecC
Q 047713          213 -GGVDRSVECTG  223 (329)
Q Consensus       213 -~~~d~Vid~~g  223 (329)
                       +++|++|++.|
T Consensus        85 ~g~id~lv~nAg   96 (319)
T 3ioy_A           85 FGPVSILCNNAG   96 (319)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence             37999999998

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.68  E-value=0.0073  Score=51.04  Aligned_cols=78  Identities=26%  Similarity=0.322  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee--eCCCCCCchHHHHHHhhhc--CCccEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF--VNPKDYDKPVQQVIADMTN--GGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~--~~~~~~~~~~~~~~~~~~~--~~~d~V  218 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+..+++.. ..  .|..+. +++.+.+++...  +++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~-~~~~~~~~~~~~~~g~iD~l   81 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDE-RERVRFVEEAAYALGRVDVL   81 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCH-HHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            4789999986 9999999998888998 88888887766444454432 22  233322 123333333322  379999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      |++.|.
T Consensus        82 v~~Ag~   87 (256)
T 2d1y_A           82 VNNAAI   87 (256)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.68  E-value=0.0058  Score=50.87  Aligned_cols=72  Identities=21%  Similarity=0.236  Sum_probs=53.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-ceee-CCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV-TEFV-NPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~-~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      .+.+|||+|+ |.+|.+++..+...|. +|+++++++++.+.+...+. ..+. |..       +.+.+.. +++|+||+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-------~~~~~~~-~~~D~vi~   90 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-------EDFSHAF-ASIDAVVF   90 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-------SCCGGGG-TTCSEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-------HHHHHHH-cCCCEEEE
Confidence            4789999987 9999999999988998 89999999988877776665 3322 222       1222222 26999999


Q ss_pred             ecCC
Q 047713          221 CTGS  224 (329)
Q Consensus       221 ~~g~  224 (329)
                      ++|.
T Consensus        91 ~ag~   94 (236)
T 3e8x_A           91 AAGS   94 (236)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9984

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.68  E-value=0.007  Score=51.28  Aligned_cols=78  Identities=13%  Similarity=0.224  Sum_probs=51.8

Q ss_pred             CCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce----eeCCCCCCchHHHHHHhhhc
Q 047713          144 KGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE----FVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~----~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .|+++||+|+ |  +||.++++.+...|+ +|+.++++++..+.+    ++++...    ..|..+. ++..+.+.+...
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~   82 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSD-EEVINGFEQIGK   82 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCH-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCH-HHHHHHHHHHHH
Confidence            4899999986 4  899999999999999 898898887765543    3344321    2233332 123333333322


Q ss_pred             --CCccEEEEecC
Q 047713          213 --GGVDRSVECTG  223 (329)
Q Consensus       213 --~~~d~Vid~~g  223 (329)
                        +++|+++++.|
T Consensus        83 ~~G~iD~lvnnAg   95 (256)
T 4fs3_A           83 DVGNIDGVYHSIA   95 (256)
T ss_dssp             HHCCCSEEEECCC
T ss_pred             HhCCCCEEEeccc
Confidence              47999999887

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.67  E-value=0.0062  Score=51.71  Aligned_cols=79  Identities=15%  Similarity=0.070  Sum_probs=52.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH---HHhcCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE---AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~---~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.   +++.+...   ..|..+. ++..+.+.+...  ++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~v~~~~~~~G~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDD-AQCRDAVAQTIATFGR   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCH-HHHHHHHHHHHHHhCC
Confidence            4899999986 9999999998888999 78888877655443   33344322   2233322 223334443332  47


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|+++++.|.
T Consensus        84 iDiLVNnAGi   93 (258)
T 4gkb_A           84 LDGLVNNAGV   93 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.65  E-value=0.015  Score=49.35  Aligned_cols=79  Identities=20%  Similarity=0.252  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC-----c-e--eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV-----T-E--FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~-----~-~--~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+. .+++..     . .  ..|..+. +++.+.+++... 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~   83 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ-QQLRDTFRKVVDH   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCH-HHHHHHHHHHHHH
Confidence            4789999986 9999999999888998 88888888776543 222311     1 1  1233322 123333333222 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|++|++.|.
T Consensus        84 ~g~id~lv~~Ag~   96 (267)
T 2gdz_A           84 FGRLDILVNNAGV   96 (267)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             369999999873

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.63  E-value=0.0056  Score=51.85  Aligned_cols=78  Identities=21%  Similarity=0.291  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc---CCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF---GVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l---g~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+. ++   +...   ..|..+. ++..+.+.+...  +
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNT-DDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            4789999986 9999999999988999 8888988887765543 33   2221   1233322 123333333322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|++.|
T Consensus        83 ~id~lv~nAg   92 (257)
T 3imf_A           83 RIDILINNAA   92 (257)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.63  E-value=0.00043  Score=56.94  Aligned_cols=104  Identities=18%  Similarity=0.196  Sum_probs=70.3

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      +.....+.++++||.+|+| .|..+..+++..+. .+|++++.+++..+.+++.    +...+- ....+  ..   ...
T Consensus        69 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~-~~~~d--~~---~~~  141 (215)
T 2yxe_A           69 MCELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVI-VIVGD--GT---LGY  141 (215)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEE-EEESC--GG---GCC
T ss_pred             HHHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeE-EEECC--cc---cCC
Confidence            3455678899999999988 48889999998762 3899999999888776653    332211 11111  11   111


Q ss_pred             h-cCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          211 T-NGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       211 ~-~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      . .+.+|+|+.........+.+.++|+++ |+++..-.
T Consensus       142 ~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~~  178 (215)
T 2yxe_A          142 EPLAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPVG  178 (215)
T ss_dssp             GGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             CCCCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEEC
Confidence            1 237999997765544456778899998 98887743

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.62  E-value=0.0076  Score=52.37  Aligned_cols=78  Identities=22%  Similarity=0.395  Sum_probs=52.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .|+++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+. +++.+.+++...  +
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHL-DEMVRLADEAFRLLG  107 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhCC
Confidence            5789999986 9999999999989999 899998888776543    2233322   2233332 123333333322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|+++|
T Consensus       108 ~id~lvnnAg  117 (301)
T 3tjr_A          108 GVDVVFSNAG  117 (301)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.62  E-value=0.0036  Score=51.86  Aligned_cols=102  Identities=10%  Similarity=0.137  Sum_probs=67.6

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhc---
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTN---  212 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~---  212 (329)
                      ...++.+||-.|+| .|..++.+++..+ ..+|++++.+++..+.+++.    |...-+.....+  ..+.+.++..   
T Consensus        66 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d--~~~~~~~~~~~~~  142 (229)
T 2avd_A           66 RLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKP--ALETLDELLAAGE  142 (229)
T ss_dssp             HHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHHTTC
T ss_pred             HhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcC--HHHHHHHHHhcCC
Confidence            44678899999987 6888899998763 34999999999888776643    432111111122  4444444332   


Q ss_pred             -CCccEEEEecCC---HHHHHHHHHhhccCCeEEEEec
Q 047713          213 -GGVDRSVECTGS---VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       213 -~~~d~Vid~~g~---~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                       +.+|+|+-....   ...+..+.++|+++ |.++...
T Consensus       143 ~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~  179 (229)
T 2avd_A          143 AGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLR  179 (229)
T ss_dssp             TTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEC
Confidence             479998754322   35688888999998 9887753

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.62  E-value=0.008  Score=50.76  Aligned_cols=79  Identities=28%  Similarity=0.334  Sum_probs=52.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+. .++++...   ..|..+. +++.+.+++...  +++|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~iD   81 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIE-EDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4789999986 9999999999988999 88888888876654 34444321   1233322 123334443322  3699


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|++.|.
T Consensus        82 ~lv~nAg~   89 (254)
T 1hdc_A           82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.62  E-value=0.0094  Score=51.18  Aligned_cols=102  Identities=16%  Similarity=0.150  Sum_probs=69.7

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.....+.++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    +...-+.....+  +    .++.
T Consensus        56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~----~~~~  127 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG--W----EQFD  127 (287)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC--G----GGCC
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC--h----hhCC
Confidence            45566788999999999875 7888888877788 999999999988877653    321111111111  1    1222


Q ss_pred             cCCccEEEEe-----cC---CHHHHHHHHHhhccCCeEEEEecc
Q 047713          212 NGGVDRSVEC-----TG---SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~~~~d~Vid~-----~g---~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                       +.+|+|+..     .+   ....+..+.++|+++ |.++....
T Consensus       128 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  169 (287)
T 1kpg_A          128 -EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  169 (287)
T ss_dssp             -CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             -CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence             579999854     21   235678888899998 99887654

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.61  E-value=0.014  Score=49.13  Aligned_cols=105  Identities=12%  Similarity=0.124  Sum_probs=70.9

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhcCC
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      +.....++++.+||-.|+| .|..+..+++..+. +|++++.+++..+.+++..... -+.....+  ..+ + ....+.
T Consensus        47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d--~~~-~-~~~~~~  120 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEAND--ILT-K-EFPENN  120 (266)
T ss_dssp             HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECC--TTT-C-CCCTTC
T ss_pred             HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECc--ccc-C-CCCCCc
Confidence            4566678899999999987 68888888887777 9999999999999988764321 00000000  000 0 111247


Q ss_pred             ccEEEEecC--------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          215 VDRSVECTG--------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       215 ~d~Vid~~g--------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|+|+....        ....+..+.++|+++ |.++....
T Consensus       121 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  160 (266)
T 3ujc_A          121 FDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY  160 (266)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence            999986532        123467788899998 99888764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.60  E-value=0.0073  Score=50.72  Aligned_cols=79  Identities=18%  Similarity=0.189  Sum_probs=52.3

Q ss_pred             CCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCcee---eCCCCCCchHHHHHHhhhcCCcc
Q 047713          142 PKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEF---VNPKDYDKPVQQVIADMTNGGVD  216 (329)
Q Consensus       142 ~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~d  216 (329)
                      -.++++|||+|+ |++|.+++..+...|+ +|+.+++++++.+.+ +++.....   .|..+. ..+.+.+++.  +++|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~--~~id   86 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLANK-EECSNLISKT--SNLD   86 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSH-HHHHHHHHTC--SCCS
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCCH-HHHHHHHHhc--CCCC
Confidence            356899999986 9999999998888998 899998888876654 34443222   222221 1122222222  3799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|++.|.
T Consensus        87 ~li~~Ag~   94 (249)
T 3f9i_A           87 ILVCNAGI   94 (249)
T ss_dssp             EEEECCC-
T ss_pred             EEEECCCC
Confidence            99999883

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.60  E-value=0.0083  Score=51.77  Aligned_cols=77  Identities=18%  Similarity=0.231  Sum_probs=52.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCce---eeCCCCCCchHHHHHHhhhcCCccEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVTE---FVNPKDYDKPVQQVIADMTNGGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~d~V  218 (329)
                      +|+++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+. +++...   ..|..+. ++..+.+++.  +++|++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~--~~iD~l   90 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQDL-SSVRRFADGV--SGADVL   90 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTCH-HHHHHHHHTC--CCEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCH-HHHHHHHHhc--CCCCEE
Confidence            5789999986 9999999999888999 8999989888776543 444321   1233221 1233333333  479999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      |+++|.
T Consensus        91 v~nAg~   96 (291)
T 3rd5_A           91 INNAGI   96 (291)
T ss_dssp             EECCCC
T ss_pred             EECCcC
Confidence            999883

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.59  E-value=0.02  Score=47.75  Aligned_cols=74  Identities=20%  Similarity=0.304  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceee--CCCCCCchHHHHHHhhhc--CCccE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFV--NPKDYDKPVQQVIADMTN--GGVDR  217 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~--~~~~~~~~~~~~~~~~~~--~~~d~  217 (329)
                      +++++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+ +++.....+  |..+    . +.++++..  +++|+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~----~-~~~~~~~~~~~~id~   79 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD----W-EATERALGSVGPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC----H-HHHHHHHTTCCCCCE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCCC----H-HHHHHHHHHcCCCCE
Confidence            4789999987 9999999999988999 888888888776543 334222222  3222    1 12333222  36999


Q ss_pred             EEEecC
Q 047713          218 SVECTG  223 (329)
Q Consensus       218 Vid~~g  223 (329)
                      +|++.|
T Consensus        80 vi~~Ag   85 (244)
T 3d3w_A           80 LVNNAA   85 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.58  E-value=0.019  Score=47.04  Aligned_cols=97  Identities=8%  Similarity=0.029  Sum_probs=60.2

Q ss_pred             CeEEEEcC-CHHHHHHHHHHH-HcCCCEEEEEcCChh-hHHHHHhcCCc-eee--CCCCCCchHHHHHHhhhcCCccEEE
Q 047713          146 QSVAIFGL-GAVGLAAAEGAR-VSGASRIIGVDLNPS-RFNEAKKFGVT-EFV--NPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~-~~G~~~vv~~~~~~~-~~~~~~~lg~~-~~~--~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      ++|||+|+ |.+|.++++.+. ..|+ +|++++++++ +.+.+...+.. ..+  |..+     .+.+.+.. .++|+||
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-----~~~~~~~~-~~~d~vv   78 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQN-----PGXLEQAV-TNAEVVF   78 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTTC-----HHHHHHHH-TTCSEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCCC-----HHHHHHHH-cCCCEEE
Confidence            46999986 999999999887 8999 8999988887 65554322221 111  2222     12233332 2589999


Q ss_pred             EecCCHHH-HHHHHHhhccC-CeEEEEeccCC
Q 047713          220 ECTGSVQA-MISAFECVHDG-WGVAVLVGVPN  249 (329)
Q Consensus       220 d~~g~~~~-~~~~~~~l~~~-~G~vv~~g~~~  249 (329)
                      ++.|..+. ....++.+... .++++.++...
T Consensus        79 ~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           79 VGAMESGSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             ESCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             EcCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence            99986221 33444444432 26888887543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.58  E-value=0.0073  Score=51.07  Aligned_cols=79  Identities=20%  Similarity=0.267  Sum_probs=53.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+.+ +..+.+.+...  +++|
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~id   84 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLN-EIAVLGAAAGQTLGAID   84 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHH-HHHHHHHHHHHHHSSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHH-HHHHHHHHHHHHhCCCC
Confidence            4789999986 9999999999988999 899999988876654 3444322   12333221 23333333222  3799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      +++++.|.
T Consensus        85 ~lv~nAg~   92 (255)
T 4eso_A           85 LLHINAGV   92 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.58  E-value=0.00046  Score=56.54  Aligned_cols=103  Identities=15%  Similarity=0.118  Sum_probs=68.4

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.+...++++++||-.|+| .|..+..+++. +. +|++++.+++..+.+++    .+...+- ....+  ..+...  .
T Consensus        69 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~~~~--~  140 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGTG-SGYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVS-TRHGD--GWQGWQ--A  140 (210)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEE-EEESC--GGGCCG--G
T ss_pred             HHHhcCCCCCCEEEEEcCC-CCHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceE-EEECC--cccCCc--c
Confidence            3456678899999999987 48888888887 55 99999999988877665    3432211 11111  111000  1


Q ss_pred             cCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          212 NGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+.+|+|+.........+...+.|+++ |+++..-.
T Consensus       141 ~~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~~  175 (210)
T 3lbf_A          141 RAPFDAIIVTAAPPEIPTALMTQLDEG-GILVLPVG  175 (210)
T ss_dssp             GCCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEEC
T ss_pred             CCCccEEEEccchhhhhHHHHHhcccC-cEEEEEEc
Confidence            247999997655444445678899998 98877644

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.56  E-value=0.0081  Score=51.48  Aligned_cols=78  Identities=15%  Similarity=0.231  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC--ce-ee--CCCCCCchHHHHHHhhh--cCC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV--TE-FV--NPKDYDKPVQQVIADMT--NGG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~--~~-~~--~~~~~~~~~~~~~~~~~--~~~  214 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+. .+++..  .. .+  |..+. +++.+.+++..  .++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~  105 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSE-AGARRLAQALGELSAR  105 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSH-HHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCH-HHHHHHHHHHHHhcCC
Confidence            3789999986 9999999999988999 89999888776553 333321  11 11  22221 12333333322  237


Q ss_pred             ccEEEEecC
Q 047713          215 VDRSVECTG  223 (329)
Q Consensus       215 ~d~Vid~~g  223 (329)
                      +|++|+++|
T Consensus       106 iD~lvnnAg  114 (276)
T 2b4q_A          106 LDILVNNAG  114 (276)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.56  E-value=0.0094  Score=50.68  Aligned_cols=78  Identities=21%  Similarity=0.272  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc-----CCce---eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF-----GVTE---FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l-----g~~~---~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+ +++     +...   ..|..+. +++.+.+++... 
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE-AQVEAYVTATTER   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCH-HHHHHHHHHHHHH
Confidence            4789999986 9999999998888999 888888887765433 222     3321   1233332 123333333322 


Q ss_pred             -CCccEEEEecC
Q 047713          213 -GGVDRSVECTG  223 (329)
Q Consensus       213 -~~~d~Vid~~g  223 (329)
                       +++|++|++.|
T Consensus        90 ~g~id~lv~nAg  101 (267)
T 1iy8_A           90 FGRIDGFFNNAG  101 (267)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             36999999987

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.55  E-value=0.0096  Score=50.40  Aligned_cols=79  Identities=25%  Similarity=0.329  Sum_probs=53.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.++++.++.+. .++++...   ..|..+. ++..+.+.+...  +++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQ-DSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4789999986 9999999998888999 88888888877654 44454322   1233332 123333333322  3799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|++.|.
T Consensus        85 ~lv~~Ag~   92 (259)
T 4e6p_A           85 ILVNNAAL   92 (259)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.55  E-value=0.0092  Score=50.92  Aligned_cols=79  Identities=20%  Similarity=0.287  Sum_probs=52.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCcee--eCCCCCCchHHHHHHhhhc--CCccE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEF--VNPKDYDKPVQQVIADMTN--GGVDR  217 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~--~~~~~~~~~~~~~~~~~~~--~~~d~  217 (329)
                      +++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+ +++.....  .|..+. +++.+.+++...  +++|+
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQE-DDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSH-HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            4789999986 9999999999988999 888888888776544 33432122  233322 123333333222  37999


Q ss_pred             EEEecCC
Q 047713          218 SVECTGS  224 (329)
Q Consensus       218 Vid~~g~  224 (329)
                      +|++.|.
T Consensus        86 lv~nAg~   92 (270)
T 1yde_A           86 VVNNAGH   92 (270)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998873

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.55  E-value=0.0079  Score=51.37  Aligned_cols=78  Identities=22%  Similarity=0.300  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc---eeeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVT---EFVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~---~~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+..   ...|..+.+ ++.+.+.+...  +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDAT-AVDALVESTLKEFG  104 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHH-HHHHHHHHHHHHcC
Confidence            4789999986 9999999998888999 899998888765533    233332   122333321 23333333322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|++.|
T Consensus       105 ~iD~lvnnAg  114 (270)
T 3ftp_A          105 ALNVLVNNAG  114 (270)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.53  E-value=0.023  Score=46.54  Aligned_cols=92  Identities=18%  Similarity=0.214  Sum_probs=60.4

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +|||+|+ |.+|..++..+...|. +|+++++++++.+.+...+...+ .|..+.+  .     +.. +++|+||+++|.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~--~-----~~~-~~~d~vi~~ag~   72 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLVLT--E-----ADL-DSVDAVVDALSV   72 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGGCC--H-----HHH-TTCSEEEECCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccccc--H-----hhc-ccCCEEEECCcc
Confidence            5899987 9999999999988898 89999998887765543344322 2333333  2     111 368999999976


Q ss_pred             H----------HHHHHHHHhhccCCeEEEEecc
Q 047713          225 V----------QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       225 ~----------~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .          ......++.+....++++.++.
T Consensus        73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            2          1233444554443268888853

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.53  E-value=0.01  Score=49.82  Aligned_cols=78  Identities=22%  Similarity=0.311  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-K---KFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~---~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+ +   +.+...   ..|..+. +++.+.+.+...  +
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADR-QGVDAAVASTVEALG   83 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            3689999986 9999999998888999 888888887765543 2   224321   1233322 123333333322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|++.|
T Consensus        84 ~id~lv~nAg   93 (247)
T 2jah_A           84 GLDILVNNAG   93 (247)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.52  E-value=0.0074  Score=51.23  Aligned_cols=78  Identities=17%  Similarity=0.137  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHhcCCcee-eCCCCCCchHHHHHHhhhc--CCccEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-FNEAKKFGVTEF-VNPKDYDKPVQQVIADMTN--GGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~--~~~d~V  218 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++ .+.+++.+...+ .|..+. +++.+.+.+...  +++|++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~iD~l  103 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSCE-TGIMAFIDLLKTQTSSLRAV  103 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTSH-HHHHHHHHHHHHHCSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCCH-HHHHHHHHHHHHhcCCCCEE
Confidence            3688999986 9999999998888899 67777776654 344555664332 233322 223333333322  379999


Q ss_pred             EEecC
Q 047713          219 VECTG  223 (329)
Q Consensus       219 id~~g  223 (329)
                      |++.|
T Consensus       104 v~nAg  108 (260)
T 3gem_A          104 VHNAS  108 (260)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.52  E-value=0.01  Score=50.49  Aligned_cols=79  Identities=23%  Similarity=0.345  Sum_probs=52.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+. ++..+.+++...  +++|
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~iD   82 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDP-KAVEAVFAEALEEFGRLH   82 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCH-HHHHHHHHHHHHHcCCCc
Confidence            4689999986 9999999999888999 888888888776554 4443221   1233322 123333333322  3699


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|++.|.
T Consensus        83 ~lvnnAg~   90 (263)
T 2a4k_A           83 GVAHFAGV   90 (263)
T ss_dssp             EEEEGGGG
T ss_pred             EEEECCCC
Confidence            99999873

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.52  E-value=0.0042  Score=52.30  Aligned_cols=75  Identities=21%  Similarity=0.276  Sum_probs=52.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHHhcCCce---eeCCCCCCchHHHHHHhhh-cCCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP--SRFNEAKKFGVTE---FVNPKDYDKPVQQVIADMT-NGGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~--~~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~-~~~~d  216 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++  +..+.+++.|...   ..|..+..     .+++.. .+++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~-----~v~~~~~~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPL-----AAKDSFTDAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTT-----TTTTSSTTTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHH-----HHHHHHHhCCCC
Confidence            4899999976 9999999999999999 788887764  4456677777543   22333322     122222 24899


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      +.+++.|.
T Consensus        82 iLVNNAGi   89 (247)
T 4hp8_A           82 ILVNNAGI   89 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.52  E-value=0.01  Score=49.90  Aligned_cols=79  Identities=25%  Similarity=0.257  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHH-HHHhcCCce---eeCCCCCCchHHHHHHhhhc--CCc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP-SRFN-EAKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGV  215 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~-~~~~-~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~  215 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++ ++.+ .+++.+...   ..|..+. +++.+.+++...  +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~i   83 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQP-GDVEAFGKQVISTFGRC   83 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCH-HHHHHHHHHHHHHcCCC
Confidence            4789999986 9999999999888999 788888776 5543 345555422   1233322 123333333322  479


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |++|++.|.
T Consensus        84 d~lv~nAg~   92 (249)
T 2ew8_A           84 DILVNNAGI   92 (249)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.51  E-value=0.02  Score=48.79  Aligned_cols=101  Identities=24%  Similarity=0.341  Sum_probs=61.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD-LNPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~-~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+. ++.++.+.    +++.+....   .|..+. +++.+.+++...  
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDA-EAIEQAIRETVEAL  107 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            4789999986 9999999999888999 677664 44444332    333454322   233222 123333443322  


Q ss_pred             CCccEEEEecCCH----------H---------------HHHHHHHhhccCCeEEEEecc
Q 047713          213 GGVDRSVECTGSV----------Q---------------AMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       213 ~~~d~Vid~~g~~----------~---------------~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +++|++|+++|..          +               ..+.++..++.. |+++.++.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS  166 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGS  166 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeC
Confidence            3799999998731          1               123344455666 89998865

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.51  E-value=0.01  Score=50.94  Aligned_cols=78  Identities=24%  Similarity=0.294  Sum_probs=53.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+. .++++...   ..|..+. ++..+.+.+...  +++|
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD  103 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSA-KDAESMVEKTTAKWGRVD  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4789999986 9999999999988999 88888888877654 34455432   1233322 123333333322  3799


Q ss_pred             EEEEecC
Q 047713          217 RSVECTG  223 (329)
Q Consensus       217 ~Vid~~g  223 (329)
                      ++|+++|
T Consensus       104 ~lv~nAg  110 (277)
T 4dqx_A          104 VLVNNAG  110 (277)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.51  E-value=0.008  Score=51.05  Aligned_cols=78  Identities=18%  Similarity=0.278  Sum_probs=51.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC-c-e--eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGV-T-E--FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~-~-~--~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+. . .  ..|..+. ++..+.+.+...  
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDR-AQCDALAGRAVEEF   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCH-HHHHHHHHHHHHHh
Confidence            4789999986 9999999999989999 888898888775542    23331 1 1  1233322 123333333322  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|++.|
T Consensus        87 g~id~lvnnAg   97 (262)
T 3pk0_A           87 GGIDVVCANAG   97 (262)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999988

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.50  E-value=0.0085  Score=51.42  Aligned_cols=79  Identities=19%  Similarity=0.365  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCC---ce---eeCCCCCCchHHHHHHhhhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGV---TE---FVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~---~~---~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.    +++.+.   ..   ..|..+. ++..+.+++...
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~   87 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNE-DETARAVDAVTA   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCH-HHHHHHHHHHHH
Confidence            4789999986 9999999998888999 88888888876543    233332   11   1233322 123333433322


Q ss_pred             --CCccEEEEecCC
Q 047713          213 --GGVDRSVECTGS  224 (329)
Q Consensus       213 --~~~d~Vid~~g~  224 (329)
                        +++|+++++.|.
T Consensus        88 ~~g~id~lv~nAg~  101 (281)
T 3svt_A           88 WHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence              379999999884

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.49  E-value=0.01  Score=50.44  Aligned_cols=79  Identities=19%  Similarity=0.239  Sum_probs=52.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ +..+.+.+...  +
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g   87 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDA-QVAHLVDETMKAYG   87 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHTS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence            5789999986 9999999999888999 888888888765543    2334322   12333321 23333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        88 ~id~lv~nAg~   98 (264)
T 3ucx_A           88 RVDVVINNAFR   98 (264)
T ss_dssp             CCSEEEECCCS
T ss_pred             CCcEEEECCCC
Confidence            79999998864

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.48  E-value=0.0074  Score=50.79  Aligned_cols=78  Identities=27%  Similarity=0.399  Sum_probs=52.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc---eeeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVT---EFVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~---~~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+ ++++..   ...|..+.+ +..+.+++...  +++|
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~iD   85 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTNPE-SIEAVLKAITDEFGGVD   85 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHH-HHHHHHHHHHHHHCCCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHH-HHHHHHHHHHHHcCCCC
Confidence            4789999986 9999999999999999 888888888776554 333321   122333321 23333333322  3799


Q ss_pred             EEEEecC
Q 047713          217 RSVECTG  223 (329)
Q Consensus       217 ~Vid~~g  223 (329)
                      +++++.|
T Consensus        86 ~lv~nAg   92 (248)
T 3op4_A           86 ILVNNAG   92 (248)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.48  E-value=0.011  Score=50.86  Aligned_cols=79  Identities=18%  Similarity=0.234  Sum_probs=52.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF---GVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l---g~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +++++||+|+ +++|.+++..+...|+ +|+.++++.++.+.+ +++   +...   ..|..+. ++..+.+.+...  +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE-LQMRNAVRDLVLKFG  104 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence            4789999986 9999999998888999 888888888766543 333   3221   1233322 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++++++|.
T Consensus       105 ~iD~lVnnAg~  115 (283)
T 3v8b_A          105 HLDIVVANAGI  115 (283)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.48  E-value=0.0096  Score=51.13  Aligned_cols=79  Identities=19%  Similarity=0.265  Sum_probs=53.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+ ++++...   ..|..+. ++..+.+.+...  +++|
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~iD   81 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSL-QDQKRAAERCLAAFGKID   81 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCH-HHHHHHHHHHHHhcCCCC
Confidence            4789999986 9999999999989999 899998888876654 3444322   1233322 123333333322  3799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      +++++.|.
T Consensus        82 ~lvnnAg~   89 (281)
T 3zv4_A           82 TLIPNAGI   89 (281)
T ss_dssp             EEECCCCC
T ss_pred             EEEECCCc
Confidence            99999873

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.47  E-value=0.01  Score=49.24  Aligned_cols=77  Identities=18%  Similarity=0.196  Sum_probs=50.7

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC-Cce-eeCCCCCCchHHHHHHhhhc--CCccEE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFG-VTE-FVNPKDYDKPVQQVIADMTN--GGVDRS  218 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg-~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~V  218 (329)
                      ++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+ ++++ ... ..|..+. +++.+.+.+...  +++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~l   82 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREE-GDWARAVAAMEEAFGELSAL   82 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            568999986 9999999998888998 888888887776543 3343 211 1233322 123333333221  369999


Q ss_pred             EEecC
Q 047713          219 VECTG  223 (329)
Q Consensus       219 id~~g  223 (329)
                      |++.|
T Consensus        83 i~~Ag   87 (234)
T 2ehd_A           83 VNNAG   87 (234)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.47  E-value=0.011  Score=49.51  Aligned_cols=79  Identities=19%  Similarity=0.321  Sum_probs=52.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+. ++..+.+.+...  +
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDI-ESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHcC
Confidence            3689999986 9999999998888999 888888888765543    3334322   1233322 123334444322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        82 ~id~li~~Ag~   92 (247)
T 3lyl_A           82 AIDILVNNAGI   92 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.47  E-value=0.012  Score=49.29  Aligned_cols=80  Identities=20%  Similarity=0.314  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC--cee--eCCCCCC-chHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGV--TEF--VNPKDYD-KPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~--~~~--~~~~~~~-~~~~~~~~~~~~-  212 (329)
                      +|+++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+    ++.+.  ..+  ++....+ +++.+.+++... 
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            5789999986 9999999999988999 899998888776543    23331  111  2221122 123333333222 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|++|++.|.
T Consensus        92 ~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 FGRLDGLLHNASI  104 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence             379999999874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.46  E-value=0.011  Score=50.25  Aligned_cols=79  Identities=23%  Similarity=0.371  Sum_probs=53.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh----cCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK----FGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~----lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+ ++    .+...   ..|..+.+ +..+.+++...  
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPD-APAELARRAAEAF   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTT-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHc
Confidence            4789999986 9999999999999999 899998888765543 22    34322   23444433 24343443322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus        97 g~id~lv~nAg~  108 (266)
T 4egf_A           97 GGLDVLVNNAGI  108 (266)
T ss_dssp             TSCSEEEEECCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999873

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.46  E-value=0.011  Score=50.55  Aligned_cols=79  Identities=22%  Similarity=0.299  Sum_probs=53.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+. .++++...   ..|..+. +++.+.+++...  +++|
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id   87 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTNE-VSVRALIDFTIDTFGRLD   87 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4789999986 9999999999989999 88888888776654 44555322   2233332 123333333322  3799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      +++++.|.
T Consensus        88 ~lv~nAg~   95 (271)
T 3tzq_B           88 IVDNNAAH   95 (271)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.46  E-value=0.007  Score=51.91  Aligned_cols=78  Identities=22%  Similarity=0.276  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CC---ce---eeCCCCCCchHHHHHHhhhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF---GV---TE---FVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l---g~---~~---~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+ +++   +.   ..   ..|..+. +++.+.+++...
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~   82 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTE-DGQDQIINSTLK   82 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSH-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCH-HHHHHHHHHHHH
Confidence            4688999986 9999999998888999 888888888766543 222   32   11   1233322 123333333322


Q ss_pred             --CCccEEEEecC
Q 047713          213 --GGVDRSVECTG  223 (329)
Q Consensus       213 --~~~d~Vid~~g  223 (329)
                        +++|++|++.|
T Consensus        83 ~~g~iD~lv~nAg   95 (280)
T 1xkq_A           83 QFGKIDVLVNNAG   95 (280)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence              36999999987

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.46  E-value=0.023  Score=51.67  Aligned_cols=96  Identities=16%  Similarity=0.231  Sum_probs=66.9

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +..|+|.|.|.+|+.+++.++..|. .|++++.++++.+.+++.|...++-...    -.+.+++..-..+|+|+-+++.
T Consensus         4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~GDat----~~~~L~~agi~~A~~viv~~~~   78 (413)
T 3l9w_A            4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYGDAT----RMDLLESAGAAKAEVLINAIDD   78 (413)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEESCTT----CHHHHHHTTTTTCSEEEECCSS
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEcCCC----CHHHHHhcCCCccCEEEECCCC
Confidence            4679999999999999999999998 8999999999999999988764442211    1223444423379999999976


Q ss_pred             HHHHHHHH---HhhccCCeEEEEec
Q 047713          225 VQAMISAF---ECVHDGWGVAVLVG  246 (329)
Q Consensus       225 ~~~~~~~~---~~l~~~~G~vv~~g  246 (329)
                      ...-....   +.+.+. -+++.-.
T Consensus        79 ~~~n~~i~~~ar~~~p~-~~Iiara  102 (413)
T 3l9w_A           79 PQTNLQLTEMVKEHFPH-LQIIARA  102 (413)
T ss_dssp             HHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             hHHHHHHHHHHHHhCCC-CeEEEEE
Confidence            54432222   334454 4555543

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.45  E-value=0.015  Score=48.40  Aligned_cols=102  Identities=18%  Similarity=0.252  Sum_probs=67.2

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCC-----ceeeCCCCCCchHHHHHHhh
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKFGV-----TEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~lg~-----~~~~~~~~~~~~~~~~~~~~  210 (329)
                      +....++||++||=.|+|+ |..+..+|+..|. .+|++++.+++..+.+++.-.     ..+.......    .. ...
T Consensus        70 l~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p----~~-~~~  143 (233)
T 4df3_A           70 LIELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFP----EK-YRH  143 (233)
T ss_dssp             CSCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCG----GG-GTT
T ss_pred             hhhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCc----cc-ccc
Confidence            3457899999999999874 8888889988764 389999999998887765422     1222111110    00 011


Q ss_pred             hcCCccEEEEecCCH----HHHHHHHHhhccCCeEEEEe
Q 047713          211 TNGGVDRSVECTGSV----QAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       211 ~~~~~d~Vid~~g~~----~~~~~~~~~l~~~~G~vv~~  245 (329)
                      ..+.+|+||.....+    ..+..+.+.|+++ |+++..
T Consensus       144 ~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~  181 (233)
T 4df3_A          144 LVEGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA  181 (233)
T ss_dssp             TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence            123689888555432    2466677889998 998765

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.45  E-value=0.0043  Score=53.36  Aligned_cols=79  Identities=20%  Similarity=0.263  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc---CC-c-e--eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF---GV-T-E--FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l---g~-~-~--~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|+++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+. ++   +. . .  ..|..+.+ ++.+.+.+...  
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPD-QVAALFAAVRAEF  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            5789999986 9999999999888999 8999988887655432 22   21 1 1  22333321 23333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|+++|.
T Consensus       110 g~iD~lvnnAG~  121 (281)
T 4dry_A          110 ARLDLLVNNAGS  121 (281)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.45  E-value=0.012  Score=49.88  Aligned_cols=78  Identities=13%  Similarity=0.188  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc---eeeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVT---EFVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~---~~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+ +++...   ...|..+. +++.+.+++...  +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~iD   83 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQP-AQWKAAVDTAVTAFGGLH   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4789999986 9999999998888899 888888888766543 334321   12233322 123333333322  3699


Q ss_pred             EEEEecC
Q 047713          217 RSVECTG  223 (329)
Q Consensus       217 ~Vid~~g  223 (329)
                      ++|++.|
T Consensus        84 ~lv~~Ag   90 (260)
T 1nff_A           84 VLVNNAG   90 (260)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.45  E-value=0.019  Score=47.84  Aligned_cols=74  Identities=20%  Similarity=0.329  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc-CCcee-eCCCCCCchHHHHHHhhhc--CCccE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KF-GVTEF-VNPKDYDKPVQQVIADMTN--GGVDR  217 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~l-g~~~~-~~~~~~~~~~~~~~~~~~~--~~~d~  217 (329)
                      ++.++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+. ++ +...+ .|..+.     +.++++..  +++|+
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~~~id~   79 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW-----DATEKALGGIGPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-----HHHHHHHTTCCCCSE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCCCH-----HHHHHHHHHcCCCCE
Confidence            4789999987 9999999999988999 8888888887665443 23 22221 232221     12333322  36899


Q ss_pred             EEEecC
Q 047713          218 SVECTG  223 (329)
Q Consensus       218 Vid~~g  223 (329)
                      +|++.|
T Consensus        80 vi~~Ag   85 (244)
T 1cyd_A           80 LVNNAA   85 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.44  E-value=0.012  Score=49.85  Aligned_cols=79  Identities=23%  Similarity=0.336  Sum_probs=51.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK---FGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+ ++   .+...   ..|..+. +++.+.+.+...  +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSE-EAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhC
Confidence            4789999986 9999999999998999 888888887765433 22   24322   1233322 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        84 ~id~lv~nAg~   94 (262)
T 1zem_A           84 KIDFLFNNAGY   94 (262)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999998873

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.44  E-value=0.0096  Score=50.90  Aligned_cols=79  Identities=19%  Similarity=0.202  Sum_probs=52.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.+++++++.+. .++++...   ..|..+. ++..+.+.+...  +++|
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDP-DSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4788999986 9999999999888999 88888888877654 44454321   1233322 123333333322  3799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|+++|.
T Consensus       105 ~lVnnAg~  112 (272)
T 4dyv_A          105 VLFNNAGT  112 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.44  E-value=0.0079  Score=50.76  Aligned_cols=79  Identities=14%  Similarity=0.223  Sum_probs=51.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc-CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN-GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~-~~  214 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ +..+.+.+... ++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNED-EVTAFLNAADAHAP   83 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHH-HHHHHHHHHHhhCC
Confidence            4789999986 9999999999988999 899998887765433    2334322   22333221 23332322211 57


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|++.|.
T Consensus        84 id~lv~nAg~   93 (252)
T 3h7a_A           84 LEVTIFNVGA   93 (252)
T ss_dssp             EEEEEECCCC
T ss_pred             ceEEEECCCc
Confidence            9999999883

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.44  E-value=0.013  Score=49.52  Aligned_cols=78  Identities=17%  Similarity=0.242  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCCce---eeCCCCCCchHHHHHHh---hhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-K---KFGVTE---FVNPKDYDKPVQQVIAD---MTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~---~lg~~~---~~~~~~~~~~~~~~~~~---~~~  212 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+ +   +.+...   ..|..+. ++..+.+.+   ..+
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   85 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR-SERQELMNTVANHFH   85 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCH-HHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            4789999986 9999999998888999 888888887765432 2   224321   1233322 123333332   222


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|++.|
T Consensus        86 g~id~lv~~Ag   96 (260)
T 2ae2_A           86 GKLNILVNNAG   96 (260)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            57999999987

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.44  E-value=0.011  Score=50.67  Aligned_cols=79  Identities=19%  Similarity=0.302  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+. ++..+.+.+...  +
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTST-DEVHAAVAAAVERFG  100 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCH-HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            4789999986 9999999998888999 898888888765542    2334322   1233322 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus       101 ~id~lv~nAg~  111 (279)
T 3sju_A          101 PIGILVNSAGR  111 (279)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999999874

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.43  E-value=0.016  Score=49.52  Aligned_cols=79  Identities=19%  Similarity=0.293  Sum_probs=51.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHH---hhhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIA---DMTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~---~~~~  212 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ +..+.+.   +...
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRT-ERDKLMQTVAHVFD   97 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            4789999986 9999999999988999 898888887765432    2234322   22333221 2333332   2222


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus        98 g~id~lv~nAg~  109 (273)
T 1ae1_A           98 GKLNILVNNAGV  109 (273)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            579999999874

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.43  E-value=0.012  Score=50.14  Aligned_cols=79  Identities=20%  Similarity=0.249  Sum_probs=51.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhh--cC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMT--NG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~--~~  213 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+. +++.+.+.+..  .+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR-EDIYSSAKKVKAEIG  107 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCH-HHHHHHHHHHHHHCC
Confidence            4789999986 9999999999988998 888888887765432    2334321   1233322 12333333332  23


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|+++|.
T Consensus       108 ~iD~li~~Ag~  118 (272)
T 1yb1_A          108 DVSILVNNAGV  118 (272)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            79999999873

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.43  E-value=0.0093  Score=51.14  Aligned_cols=79  Identities=24%  Similarity=0.405  Sum_probs=53.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+. .++++...   ..|..+.+ +..+.+.+...  +++|
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~iD  105 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQ-QIIAMVDACVAAFGGVD  105 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHH-HHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence            4789999986 9999999998888999 89999888877654 44455321   22333321 23333333322  3799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      +++++.|.
T Consensus       106 ~lvnnAg~  113 (277)
T 3gvc_A          106 KLVANAGV  113 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.43  E-value=0.021  Score=48.26  Aligned_cols=79  Identities=16%  Similarity=0.251  Sum_probs=49.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+ .+++++.+.    +++.+...   ..|..+. ++..+.+++...  
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   84 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNA-AEVEAAISAAADKF   84 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHh
Confidence            4789999986 9999999999888999 67766 555544332    33344322   1233322 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|+++++.|.
T Consensus        85 g~id~lv~nAg~   96 (259)
T 3edm_A           85 GEIHGLVHVAGG   96 (259)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999998873

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.43  E-value=0.012  Score=49.77  Aligned_cols=78  Identities=33%  Similarity=0.477  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF----GVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l----g~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+ +++    +...   ..|..+. +++.+.+.+...  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATP-EGVDAVVESVRSSF   83 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4789999986 9999999999888999 888888887765432 222    4321   1233322 123333333322  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|++.|
T Consensus        84 g~id~lv~~Ag   94 (263)
T 3ai3_A           84 GGADILVNNAG   94 (263)
T ss_dssp             SSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.42  E-value=0.011  Score=50.50  Aligned_cols=78  Identities=18%  Similarity=0.339  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC-ce----eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGV-TE----FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~-~~----~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      +++++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+    ++.+. ..    ..|..+. +++.+.++++.. 
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  108 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE-EDILSMFSAIRSQ  108 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCH-HHHHHHHHHHHHh
Confidence            3689999986 9999999998888999 888888887765433    23332 11    1233322 123333333222 


Q ss_pred             -CCccEEEEecC
Q 047713          213 -GGVDRSVECTG  223 (329)
Q Consensus       213 -~~~d~Vid~~g  223 (329)
                       +++|++|+++|
T Consensus       109 ~g~iD~vi~~Ag  120 (279)
T 1xg5_A          109 HSGVDICINNAG  120 (279)
T ss_dssp             HCCCSEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence             36999999987

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.42  E-value=0.0091  Score=50.50  Aligned_cols=79  Identities=20%  Similarity=0.247  Sum_probs=52.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ +..+.+++...  +
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g   88 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQ-HREAVIKAALDQFG   88 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            4789999986 9999999998888899 788888888765543    3334322   12333221 23333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+++++.|.
T Consensus        89 ~id~lv~nAg~   99 (256)
T 3gaf_A           89 KITVLVNNAGG   99 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.42  E-value=0.012  Score=50.05  Aligned_cols=79  Identities=16%  Similarity=0.242  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC--c-e--eeCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV--T-E--FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~--~-~--~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+. .++++.  . .  ..|..+. +++.+.+++...  ++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   92 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKD-EDVRNLVDTTIAKHGK   92 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence            4789999986 9999999998888898 88888888766543 334432  1 1  1233221 123333333221  36


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|++.|.
T Consensus        93 id~li~~Ag~  102 (278)
T 2bgk_A           93 LDIMFGNVGV  102 (278)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999998873

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.41  E-value=0.013  Score=49.56  Aligned_cols=78  Identities=21%  Similarity=0.266  Sum_probs=53.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .++++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+. ++..+.+++...  +++|
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   85 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKE-ADVDAAVEAALSKFGKVD   85 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHhcCCCC
Confidence            4789999986 9999999999888999 899999988876654 4455422   2233222 123333333322  3799


Q ss_pred             EEEEecC
Q 047713          217 RSVECTG  223 (329)
Q Consensus       217 ~Vid~~g  223 (329)
                      ++|++.|
T Consensus        86 ~li~~Ag   92 (261)
T 3n74_A           86 ILVNNAG   92 (261)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999987

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.39  E-value=0.014  Score=49.65  Aligned_cols=79  Identities=19%  Similarity=0.164  Sum_probs=51.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-h----cCCc-e---eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-K----FGVT-E---FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~----lg~~-~---~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .++++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. +    .+.. .   ..|..+.+ +..+.+++... 
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~   84 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDAL-QVRAFAEACERT   84 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHH-HHHHHHHHHHHH
Confidence            4789999986 9999999999888999 7888888887654432 2    3322 1   12333321 23333333322 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|+++++.|.
T Consensus        85 ~g~id~lvnnAg~   97 (265)
T 3lf2_A           85 LGCASILVNNAGQ   97 (265)
T ss_dssp             HCSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999999883

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.39  E-value=0.03  Score=45.62  Aligned_cols=91  Identities=14%  Similarity=0.215  Sum_probs=60.1

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +|||+|+ |.+|..++..+...|. +|+++++++++.+.+. -+...+ .|..+.+  . +.   +  +++|+||+++|.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~--~-~~---~--~~~d~vi~~ag~   71 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIFDLT--L-SD---L--SDQNVVVDAYGI   71 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGGGCC--H-HH---H--TTCSEEEECCCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEeccccChh--h-hh---h--cCCCEEEECCcC
Confidence            5899987 9999999999998998 8999988887766543 233222 2333332  2 11   1  368999999985


Q ss_pred             H--------HHHHHHHHhhccC-CeEEEEecc
Q 047713          225 V--------QAMISAFECVHDG-WGVAVLVGV  247 (329)
Q Consensus       225 ~--------~~~~~~~~~l~~~-~G~vv~~g~  247 (329)
                      .        ......++.++.. .++++.++.
T Consensus        72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS  103 (221)
T 3ew7_A           72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG  103 (221)
T ss_dssp             STTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred             CccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence            3        2234455555543 268887764

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.39  E-value=0.0085  Score=50.83  Aligned_cols=79  Identities=18%  Similarity=0.225  Sum_probs=52.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+. +++.+.+.+...  +
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHS-DAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCH-HHHHHHHHHHHHhcC
Confidence            4789999986 9999999998888899 788898888775543    2334322   1233322 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      .+|++|+++|.
T Consensus       106 ~id~lv~~Ag~  116 (262)
T 3rkr_A          106 RCDVLVNNAGV  116 (262)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            69999999875

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.39  E-value=0.0018  Score=54.19  Aligned_cols=100  Identities=19%  Similarity=0.212  Sum_probs=66.8

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee--eCCCCCCchHHHHHHhhhcCCccEE-
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF--VNPKDYDKPVQQVIADMTNGGVDRS-  218 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~d~V-  218 (329)
                      ..+|.+||-+|.| .|..+..+++..+. .|++++.+++..+.+++.....-  +.....+  +......+..+.||.| 
T Consensus        58 ~~~G~rVLdiG~G-~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~--a~~~~~~~~~~~FD~i~  133 (236)
T 3orh_A           58 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL--WEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             TTTCEEEEEECCT-TSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESC--HHHHGGGSCTTCEEEEE
T ss_pred             ccCCCeEEEECCC-ccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeeh--HHhhcccccccCCceEE
Confidence            3678999999987 47888888887666 89999999999888887543210  0011112  4333344444479987 


Q ss_pred             EEecCC----------HHHHHHHHHhhccCCeEEEEec
Q 047713          219 VECTGS----------VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       219 id~~g~----------~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|++..          ...++.+.++|+|+ |+++.+.
T Consensus       134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~  170 (236)
T 3orh_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             EeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence            455421          23466788899998 9998764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.37  E-value=0.0086  Score=50.99  Aligned_cols=79  Identities=23%  Similarity=0.321  Sum_probs=52.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ +..+.+++...  +
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRH-SVAAFAQAAVDTWG   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence            3678999986 9999999999988999 888888888765543    2334322   12333321 23333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        81 ~iD~lVnnAG~   91 (264)
T 3tfo_A           81 RIDVLVNNAGV   91 (264)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.37  E-value=0.011  Score=52.93  Aligned_cols=92  Identities=16%  Similarity=0.193  Sum_probs=64.3

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ  226 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~  226 (329)
                      +|+|+|+|.+|..++..+.. .. .|..++.+.++.+.++++.....+|..+.     +.+.++.. +.|+|+++++..-
T Consensus        18 kilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d~-----~~l~~~~~-~~DvVi~~~p~~~   89 (365)
T 3abi_A           18 KVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASNF-----DKLVEVMK-EFELVIGALPGFL   89 (365)
T ss_dssp             EEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTCH-----HHHHHHHT-TCSEEEECCCGGG
T ss_pred             EEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCCH-----HHHHHHHh-CCCEEEEecCCcc
Confidence            69999999999998887754 34 78888889998888876644434444331     23333332 5899999998654


Q ss_pred             HHHHHHHhhccCCeEEEEecc
Q 047713          227 AMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       227 ~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ....+-.|+..+ -+++.+..
T Consensus        90 ~~~v~~~~~~~g-~~yvD~s~  109 (365)
T 3abi_A           90 GFKSIKAAIKSK-VDMVDVSF  109 (365)
T ss_dssp             HHHHHHHHHHHT-CEEEECCC
T ss_pred             cchHHHHHHhcC-cceEeeec
Confidence            556666677776 78887753

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.37  E-value=0.012  Score=49.53  Aligned_cols=79  Identities=23%  Similarity=0.283  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+.    +.+...   ..|..+. ++..+.+.+...  +
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   85 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDP-ESAKAMADRTLAEFG   85 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            4789999986 9999999999989999 7988988887765432    223321   1233322 123333333222  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        86 ~id~li~~Ag~   96 (253)
T 3qiv_A           86 GIDYLVNNAAI   96 (253)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.37  E-value=0.024  Score=47.64  Aligned_cols=72  Identities=18%  Similarity=0.184  Sum_probs=49.8

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      ..++++||+|+ |.+|.+++..+...|+ +|+.++++++.   +++++.... .|. ..  +..+.+.+..  ++|++|+
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~~D~-~~--~~~~~~~~~~--~iD~lv~   87 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVVCDL-RK--DLDLLFEKVK--EVDILVL   87 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEECCT-TT--CHHHHHHHSC--CCSEEEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhhCCeEEEeeH-HH--HHHHHHHHhc--CCCEEEE
Confidence            45889999986 9999999998888999 88888887743   344442222 233 11  2444444332  6999999


Q ss_pred             ecC
Q 047713          221 CTG  223 (329)
Q Consensus       221 ~~g  223 (329)
                      ++|
T Consensus        88 ~Ag   90 (249)
T 1o5i_A           88 NAG   90 (249)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.36  E-value=0.011  Score=49.46  Aligned_cols=78  Identities=22%  Similarity=0.238  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC---ce--eeCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGV---TE--FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~---~~--~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+ +++..   ..  ..|..+. +++.+.+.+...  ++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDE-DGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCH-HHHHHHHHHHHHHHSS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCH-HHHHHHHHHHHHHhCC
Confidence            4688999986 9999999998888999 788888887765543 33321   11  1233221 123333333222  36


Q ss_pred             ccEEEEecC
Q 047713          215 VDRSVECTG  223 (329)
Q Consensus       215 ~d~Vid~~g  223 (329)
                      +|++|++.|
T Consensus        83 id~li~~Ag   91 (251)
T 1zk4_A           83 VSTLVNNAG   91 (251)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.36  E-value=0.0084  Score=51.97  Aligned_cols=78  Identities=27%  Similarity=0.318  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC---ce---eeCCCCCCchHHHHHHhhhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGV---TE---FVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~---~~---~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+    ++.+.   ..   ..|..+. +++.+.+.+...
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~  102 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEA-SGQDDIINTTLA  102 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCH-HHHHHHHHHHHH
Confidence            4688999986 9999999998888999 888888888765433    22232   11   1233322 123333333222


Q ss_pred             --CCccEEEEecC
Q 047713          213 --GGVDRSVECTG  223 (329)
Q Consensus       213 --~~~d~Vid~~g  223 (329)
                        +++|++|++.|
T Consensus       103 ~~g~iD~lvnnAG  115 (297)
T 1xhl_A          103 KFGKIDILVNNAG  115 (297)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence              37999999887

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.34  E-value=0.015  Score=49.71  Aligned_cols=78  Identities=18%  Similarity=0.311  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+. +++.+.+.+...  +
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV-PEIEALVAAVVERYG   98 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHhC
Confidence            3689999986 9999999999988999 888888887765432    2234322   1233322 123333333222  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|++.|
T Consensus        99 ~iD~lv~~Ag  108 (277)
T 2rhc_B           99 PVDVLVNNAG  108 (277)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.34  E-value=0.0098  Score=50.25  Aligned_cols=79  Identities=24%  Similarity=0.388  Sum_probs=47.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.+++++++.+. .++++...   ..|..+. ++..+.+++...  +++|
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id   83 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNE-ADATAALAFAKQEFGHVH   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4789999986 9999999999988999 78888887765543 34444321   1233222 123333333322  3799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|++.|.
T Consensus        84 ~lv~nAg~   91 (257)
T 3tpc_A           84 GLVNCAGT   91 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.34  E-value=0.012  Score=49.84  Aligned_cols=78  Identities=36%  Similarity=0.392  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+. .++++...   ..|..+. +++.+.+.+...  +++|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~id   88 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSE-KDVQTALALAKGKFGRVD   88 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHHCCCCC
Confidence            4789999986 9999999999988999 78888887765543 44455322   1233322 123333333222  3699


Q ss_pred             EEEEecC
Q 047713          217 RSVECTG  223 (329)
Q Consensus       217 ~Vid~~g  223 (329)
                      ++|++.|
T Consensus        89 ~li~~Ag   95 (265)
T 2o23_A           89 VAVNCAG   95 (265)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999887

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.33  E-value=0.018  Score=48.96  Aligned_cols=79  Identities=23%  Similarity=0.450  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh----cCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK----FGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~----lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+ ++    .+...   ..|..+. +++.+.+.+...  
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY-EEVKKLLEAVKEKF   97 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4789999986 9999999999888999 888888887765432 22    24322   1233322 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|+++|.
T Consensus        98 g~iD~lvnnAg~  109 (267)
T 1vl8_A           98 GKLDTVVNAAGI  109 (267)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999873

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.32  E-value=0.011  Score=50.27  Aligned_cols=79  Identities=25%  Similarity=0.339  Sum_probs=53.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCcee---eCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTEF---VNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .|+++||+|+ |++|.+++..+...|+ +|+.+++++++.+. .++++....   .|..+. ++..+.+.+...  +++|
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD  103 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDR-KSIKQLAEVAEREMEGID  103 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSH-HHHHHHHHHHHHHHTSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCH-HHHHHHHHHHHHHcCCCC
Confidence            4789999986 9999999999999999 88888888877654 455664322   233222 123333333322  3799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|+++|.
T Consensus       104 ~lvnnAg~  111 (266)
T 3grp_A          104 ILVNNAGI  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.32  E-value=0.0098  Score=51.47  Aligned_cols=79  Identities=16%  Similarity=0.245  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhc---CCce----eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKF---GVTE----FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~l---g~~~----~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+. .+++   +...    ..|..+.+ +..+.+.+...  
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~  117 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPG-SCADAARTVVDAF  117 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHH-HHHHHHHHHHHHc
Confidence            4789999986 9999999999989999 88888888776543 3333   2111    12333221 23333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus       118 g~iD~lvnnAg~  129 (293)
T 3rih_A          118 GALDVVCANAGI  129 (293)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.32  E-value=0.022  Score=47.27  Aligned_cols=78  Identities=21%  Similarity=0.251  Sum_probs=50.4

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H----hcCCcee---eCCCCCCchHHHHHHhhhc--C
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-K----KFGVTEF---VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~----~lg~~~~---~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+ +    +.+....   .|..+.+ +..+.+++...  +
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAE-SVEEFSKKVLERFG   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHH-HHHHHCC-HHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHH-HHHHHHHHHHHhcC
Confidence            678999986 9999999999999999 788888888765543 2    2343221   2333221 22222222211  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        80 ~id~li~~Ag~   90 (235)
T 3l77_A           80 DVDVVVANAGL   90 (235)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.32  E-value=0.02  Score=48.34  Aligned_cols=41  Identities=20%  Similarity=0.285  Sum_probs=34.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA  185 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~  185 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence            4689999986 9999999998888898 899988887766543

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.31  E-value=0.012  Score=49.78  Aligned_cols=79  Identities=18%  Similarity=0.248  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+. +++.+.+.+...  +
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKA-EDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            4789999986 9999999998888999 888888887765432    2234321   1233221 123333333222  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        91 ~iD~lv~~Ag~  101 (260)
T 2zat_A           91 GVDILVSNAAV  101 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.31  E-value=0.016  Score=48.77  Aligned_cols=78  Identities=24%  Similarity=0.382  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.    +++.+...   ..|..+. +++.+.+++...  +
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT-ESVQNAVRSVHEQEG   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHcC
Confidence            4789999986 9999999998888898 89888888765543    22334321   1233321 123333333222  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|+++|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.30  E-value=0.063  Score=46.51  Aligned_cols=74  Identities=26%  Similarity=0.369  Sum_probs=54.5

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      .+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|... .-+..+.           . ...|+||.++..
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~-----------~-~~aDvvi~~vp~   74 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASAREF-----------A-GVVDALVILVVN   74 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSSTTT-----------T-TTCSEEEECCSS
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHHHH-----------H-hcCCEEEEECCC
Confidence            479999999999999998888898 8999999999999888888755 2222211           0 136888888766


Q ss_pred             HHHHHHHH
Q 047713          225 VQAMISAF  232 (329)
Q Consensus       225 ~~~~~~~~  232 (329)
                      +......+
T Consensus        75 ~~~~~~v~   82 (303)
T 3g0o_A           75 AAQVRQVL   82 (303)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            54555443

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.29  E-value=0.013  Score=49.61  Aligned_cols=78  Identities=21%  Similarity=0.239  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFNEA----KKFGVTEF---VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +++++||+|+ |++|.+++..+...|+ +|+.+ .+++++.+.+    ++.+....   .|..+. ++..+.+++...  
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQP-AKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4789999986 9999999999999999 66665 7777655433    23343221   233322 123333333322  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|++.|
T Consensus        81 g~id~lv~nAg   91 (258)
T 3oid_A           81 GRLDVFVNNAA   91 (258)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999987

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.29  E-value=0.009  Score=51.32  Aligned_cols=78  Identities=21%  Similarity=0.279  Sum_probs=51.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCceee---CCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF---GVTEFV---NPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l---g~~~~~---~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+ +++   +....+   |..+. ++..+.+.+...  +
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDE-ALHEALVELAVRRFG   84 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            4789999986 9999999999888999 899998888776543 333   322221   22221 123333333322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|+++|
T Consensus        85 ~iD~lvnnAg   94 (280)
T 3tox_A           85 GLDTAFNNAG   94 (280)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.27  E-value=0.014  Score=48.85  Aligned_cols=76  Identities=21%  Similarity=0.363  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-Cce-eeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG-VTE-FVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg-~~~-~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+.++. ... ..|..+.+ ++. .+.+. -+++|++|+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~-~~~~~-~~~id~lv~   80 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKK-QID-QFANE-VERLDVLFN   80 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHH-HHH-HHHHH-CSCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCCHH-HHH-HHHHH-hCCCCEEEE
Confidence            4788999986 9999999999888998 8998888877665433332 111 12332211 122 22221 247999999


Q ss_pred             ecC
Q 047713          221 CTG  223 (329)
Q Consensus       221 ~~g  223 (329)
                      +.|
T Consensus        81 ~Ag   83 (246)
T 2ag5_A           81 VAG   83 (246)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            987

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.27  E-value=0.01  Score=50.88  Aligned_cols=79  Identities=23%  Similarity=0.310  Sum_probs=52.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.++++.++.+.+ ++++...   ..|..+. +++.+.+.+...  +++|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g~id   81 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDG-ERIDVVAADVLARYGRVD   81 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCH-HHHHHHHHHHHHhCCCCC
Confidence            4678999986 9999999999888999 888888888766544 4444322   1233322 123333333322  3799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|+++|.
T Consensus        82 ~lv~~Ag~   89 (281)
T 3m1a_A           82 VLVNNAGR   89 (281)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999873

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.27  E-value=0.018  Score=48.47  Aligned_cols=80  Identities=14%  Similarity=0.167  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHHhc--CCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP--SRFNEAKKF--GVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~--~~~~~~~~l--g~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +++++||+|+ |.+|.+++..+...|+++|+.+++++  +..+.+++.  +...   ..|..+..++..+.+.+...  +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4689999986 99999999999889985477777664  333333333  2111   22433320234343443322  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|++.|
T Consensus        84 ~id~lv~~Ag   93 (254)
T 1sby_A           84 TVDILINGAG   93 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999987

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.27  E-value=0.013  Score=48.80  Aligned_cols=101  Identities=20%  Similarity=0.154  Sum_probs=67.1

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhc---
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTN---  212 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~---  212 (329)
                      ...++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++    .|....+.....+  ..+.+.++..   
T Consensus        69 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d--~~~~l~~l~~~~~  145 (232)
T 3cbg_A           69 SLTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGP--ALATLEQLTQGKP  145 (232)
T ss_dssp             HHHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHHHHHHTSSS
T ss_pred             HhcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhcCC
Confidence            34567899999987 6888999998764 2389999999988877654    3443212222222  4444444432   


Q ss_pred             -CCccEEEEecC---CHHHHHHHHHhhccCCeEEEEe
Q 047713          213 -GGVDRSVECTG---SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       213 -~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                       +.+|+||-...   ....++.+.++|+++ |.++.-
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~  181 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVID  181 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEe
Confidence             57999983322   134578888999998 888764

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.25  E-value=0.016  Score=46.64  Aligned_cols=103  Identities=22%  Similarity=0.230  Sum_probs=66.9

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhcCC
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      ..++++++||-.|+|. |..+..+++..+ ..+|++++.+++..+.+++.    +...-+.....+  +. .+.....+.
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~-~~~~~~~~~   93 (197)
T 3eey_A           18 MFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDG--HQ-NMDKYIDCP   93 (197)
T ss_dssp             HHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSC--GG-GGGGTCCSC
T ss_pred             hcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC--HH-HHhhhccCC
Confidence            4567899999988875 788888888764 23899999999887776543    331111111111  11 111122347


Q ss_pred             ccEEEEecCC---------------HHHHHHHHHhhccCCeEEEEecc
Q 047713          215 VDRSVECTGS---------------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       215 ~d~Vid~~g~---------------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|+|+-..+.               ...+..+.+.|+++ |+++....
T Consensus        94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  140 (197)
T 3eey_A           94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIY  140 (197)
T ss_dssp             EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEc
Confidence            9999855432               25788889999998 99887753

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.25  E-value=0.017  Score=48.67  Aligned_cols=77  Identities=21%  Similarity=0.209  Sum_probs=50.3

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhh--cCC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMT--NGG  214 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~--~~~  214 (329)
                      ++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+. +++.+.+.+..  .++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR-DQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhCC
Confidence            568999986 9999999999988999 888888887765432    2234321   1233322 12333333322  237


Q ss_pred             ccEEEEecC
Q 047713          215 VDRSVECTG  223 (329)
Q Consensus       215 ~d~Vid~~g  223 (329)
                      +|++|++.|
T Consensus        80 id~lv~nAg   88 (256)
T 1geg_A           80 FDVIVNNAG   88 (256)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.24  E-value=0.0038  Score=54.76  Aligned_cols=104  Identities=20%  Similarity=0.157  Sum_probs=68.3

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      +.....++++++||-.|+|. |..++.+++..+. .+|++++.+++..+.+++.    |...+ .....+  ..+...  
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v-~~~~~d--~~~~~~--  140 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENV-IFVCGD--GYYGVP--  140 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESC--GGGCCG--
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCe-EEEECC--hhhccc--
Confidence            45566788999999999876 8888888887542 3799999999888776653    43321 111111  111000  


Q ss_pred             hcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          211 TNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       211 ~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ..+.+|+|+.........+.+.+.|+++ |+++..-
T Consensus       141 ~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~~  175 (317)
T 1dl5_A          141 EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVPI  175 (317)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEEB
T ss_pred             cCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEEE
Confidence            1247999987654433446677899998 9887764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.23  E-value=0.016  Score=50.19  Aligned_cols=81  Identities=14%  Similarity=0.152  Sum_probs=51.7

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHh---cCCc----eeeCCCCCCchHHHHHHhhhc-
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKK---FGVT----EFVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~---lg~~----~~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      ..++++||+|+ +++|.+++..+...|+ +|+.+++++++.+. +++   .+..    ...|..+........++.+.. 
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            34789999986 9999999998888999 89999888876543 222   2221    122444331123333332222 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|++|+++|.
T Consensus        89 ~g~iD~lv~nAg~  101 (311)
T 3o26_A           89 FGKLDILVNNAGV  101 (311)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence             379999999984

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.23  E-value=0.019  Score=49.06  Aligned_cols=78  Identities=21%  Similarity=0.292  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc---CCce---eeCCCCCCchHHHHHHhhh--cCC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF---GVTE---FVNPKDYDKPVQQVIADMT--NGG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  214 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.++++++..+..+++   +...   ..|..+.+ +..+ +.+..  .++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~-~~~~~~~~g~  106 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLE-GAAN-VAEELAATRR  106 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHH-HHHH-HHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHH-HHHHHHhcCC
Confidence            4789999986 9999999999888999 788887665544444433   3221   12333221 1222 22211  147


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|+++|.
T Consensus       107 iD~lv~nAg~  116 (273)
T 3uf0_A          107 VDVLVNNAGI  116 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999873

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.21  E-value=0.0083  Score=49.53  Aligned_cols=64  Identities=14%  Similarity=0.200  Sum_probs=43.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.++++++             .|..+.+ +..+.++++  +++|+++++.
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~~~-~v~~~~~~~--g~id~lv~nA   67 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISDEK-SVYHYFETI--GAFDHLIVTA   67 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTCHH-HHHHHHHHH--CSEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCCHH-HHHHHHHHh--CCCCEEEECC
Confidence            3678999986 9999999998888898 8888876543             2222211 133333332  4688888888


Q ss_pred             CC
Q 047713          223 GS  224 (329)
Q Consensus       223 g~  224 (329)
                      |.
T Consensus        68 g~   69 (223)
T 3uce_A           68 GS   69 (223)
T ss_dssp             CC
T ss_pred             CC
Confidence            73

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.21  E-value=0.019  Score=49.64  Aligned_cols=79  Identities=18%  Similarity=0.267  Sum_probs=51.6

Q ss_pred             CCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCcee--eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTEF--VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~~--~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|+++||+|+ |  ++|.+++..+...|+ +|+.++++++..+.+    ++.+....  .|..+. +++.+.+++...  
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDA-ESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4789999986 5  999999998888999 788888887554433    33343222  233332 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus       107 g~iD~lVnnAG~  118 (296)
T 3k31_A          107 GSLDFVVHAVAF  118 (296)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999874

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.20  E-value=0.038  Score=47.46  Aligned_cols=74  Identities=30%  Similarity=0.324  Sum_probs=50.3

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCc----eeeCCCCCCchHHHHHHhhhcCCccE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVT----EFVNPKDYDKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~----~~~~~~~~~~~~~~~~~~~~~~~~d~  217 (329)
                      -.+++++|+|+|++|.+++..+...|+++|+.+.++.++.+. +++++..    .+......+  +.+.+.     .+|+
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~--l~~~l~-----~~Di  197 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG--IEDVIA-----AADG  197 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT--HHHHHH-----HSSE
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH--HHHHHh-----cCCE
Confidence            458899999999999999998888999789999898887654 3444311    111111111  433333     3799


Q ss_pred             EEEecC
Q 047713          218 SVECTG  223 (329)
Q Consensus       218 Vid~~g  223 (329)
                      ||+++.
T Consensus       198 VInaTp  203 (283)
T 3jyo_A          198 VVNATP  203 (283)
T ss_dssp             EEECSS
T ss_pred             EEECCC
Confidence            999985

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.20  E-value=0.0098  Score=50.18  Aligned_cols=75  Identities=15%  Similarity=0.045  Sum_probs=49.6

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH---hcCCceeeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK---KFGVTEFVNPKDYDKPVQQVIADMTN--GGVDRSV  219 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~---~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~d~Vi  219 (329)
                      +++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+.   +.+...... +..  +..+.+.+...  +++|++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~~--~v~~~~~~~~~~~g~iD~lv   77 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM-SEQ--EPAELIEAVTSAYGQVDVLV   77 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC-CCC--SHHHHHHHHHHHHSCCCEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEE-CHH--HHHHHHHHHHHHhCCCCEEE
Confidence            46899986 9999999999988999 8888888776655433   234332221 111  24444443322  3799999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      ++.|.
T Consensus        78 ~nAg~   82 (254)
T 1zmt_A           78 SNDIF   82 (254)
T ss_dssp             EECCC
T ss_pred             ECCCc
Confidence            99874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.18  E-value=0.011  Score=50.57  Aligned_cols=79  Identities=27%  Similarity=0.363  Sum_probs=52.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceee---CCCCCCchHHHHHHhhh--cC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTEFV---NPKDYDKPVQQVIADMT--NG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~~~---~~~~~~~~~~~~~~~~~--~~  213 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+....+   |..+. ++..+.+.+..  .+
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  102 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSE-SEIIEAFARLDEQGI  102 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCH-HHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHCC
Confidence            4789999986 9999999999989999 899888888765432    333433222   22221 12333333332  23


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+++++.|.
T Consensus       103 ~iD~lv~nAg~  113 (271)
T 4ibo_A          103 DVDILVNNAGI  113 (271)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.17  E-value=0.027  Score=47.89  Aligned_cols=103  Identities=19%  Similarity=0.303  Sum_probs=63.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHH----HHHhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFN----EAKKFGVTEF---VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~----~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+.. ++++.+    .+++.+....   .|..+. ++..+.+++...  
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   94 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQV-PEIVKLFDQAVAHF   94 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4789999986 9999999999989999 6766544 444433    2334454322   233322 123333433322  


Q ss_pred             CCccEEEEecCCH----------H---------------HHHHHHHhhccCCeEEEEeccCC
Q 047713          213 GGVDRSVECTGSV----------Q---------------AMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       213 ~~~d~Vid~~g~~----------~---------------~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +++|++|++.|..          +               ..+.++..+.++ |+++.++...
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  155 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT  155 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence            3699999998831          1               123445556666 9999987643

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.17  E-value=0.015  Score=48.70  Aligned_cols=79  Identities=25%  Similarity=0.331  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++ ++++.+.+    ++.+...   ..|..+. +++.+.+++...  
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANA-EDVTNMVKQTVDVF   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            3678999986 9999999999888999 7888777 66654432    2334322   1233322 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 2uvd_A           81 GQVDILVNNAGV   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.16  E-value=0.02  Score=48.53  Aligned_cols=79  Identities=23%  Similarity=0.244  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHh---hhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIAD---MTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~---~~~  212 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+. +++.+.+++   ..+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   90 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR-PEREKLMQTVSSMFG   90 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCH-HHHHHHHHHHHHHhC
Confidence            4688999986 9999999998888998 888888887665432    2234321   1232221 122222322   222


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus        91 ~~id~li~~Ag~  102 (266)
T 1xq1_A           91 GKLDILINNLGA  102 (266)
T ss_dssp             TCCSEEEEECCC
T ss_pred             CCCcEEEECCCC
Confidence            579999999874

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.16  E-value=0.019  Score=49.17  Aligned_cols=78  Identities=18%  Similarity=0.226  Sum_probs=51.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHh----cCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKK----FGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~----lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.++++.++.+. .++    .+...   ..|..+. ++..+.+.+...  
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAP-PAVMAAVDQALKEF  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4789999986 9999999999988999 88888888766443 222    24322   1233332 123333333322  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|++.|
T Consensus       104 g~id~lv~nAg  114 (277)
T 4fc7_A          104 GRIDILINCAA  114 (277)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            37999999987

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.15  E-value=0.015  Score=48.53  Aligned_cols=78  Identities=21%  Similarity=0.322  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-----cCCce---eeCCCCCCchHHHHHHhhh--c
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-----FGVTE---FVNPKDYDKPVQQVIADMT--N  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-----lg~~~---~~~~~~~~~~~~~~~~~~~--~  212 (329)
                      +++++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+.+     .+...   ..|..+. +++.+.+++..  .
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSE-ESINKAFEEIYNLV   83 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCH-HHHHHHHHHHHHhc
Confidence            4688999986 9999999998888898 88888888776554321     24321   1233322 12333333322  2


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|++.|
T Consensus        84 ~~~d~vi~~Ag   94 (248)
T 2pnf_A           84 DGIDILVNNAG   94 (248)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999987

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.15  E-value=0.01  Score=50.37  Aligned_cols=79  Identities=16%  Similarity=0.248  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcC---CCEEEEEcCChhhHHHHHhc---CCce---eeCCCCCCchHHHHHHh---h
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSG---ASRIIGVDLNPSRFNEAKKF---GVTE---FVNPKDYDKPVQQVIAD---M  210 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G---~~~vv~~~~~~~~~~~~~~l---g~~~---~~~~~~~~~~~~~~~~~---~  210 (329)
                      ++.++||+|+ |.+|.+++..+...|   . +|+.++++.++.+.++++   +...   ..|..+.+ ++.+.+.+   .
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~   97 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFD-AYDKLVADIEGV   97 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGG-GHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChH-HHHHHHHHHHHh
Confidence            4678999986 999999999888888   7 888888877654433332   2211   12333322 23333333   2


Q ss_pred             hcC-CccEEEEecCC
Q 047713          211 TNG-GVDRSVECTGS  224 (329)
Q Consensus       211 ~~~-~~d~Vid~~g~  224 (329)
                      .+. ++|++|+++|.
T Consensus        98 ~g~~~id~li~~Ag~  112 (267)
T 1sny_A           98 TKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HGGGCCSEEEECCCC
T ss_pred             cCCCCccEEEECCCc
Confidence            332 69999999873

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.15  E-value=0.022  Score=48.78  Aligned_cols=79  Identities=25%  Similarity=0.411  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-------------ChhhHHHH----HhcCCce---eeCCCCCCch
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-------------NPSRFNEA----KKFGVTE---FVNPKDYDKP  202 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-------------~~~~~~~~----~~lg~~~---~~~~~~~~~~  202 (329)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++             ++++.+.+    ++.+...   ..|..+. ++
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~   91 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD-AA   91 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH-HH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HH
Confidence            4789999986 9999999999989999 7888876             44444332    3334322   1233332 12


Q ss_pred             HHHHHHhhhc--CCccEEEEecCC
Q 047713          203 VQQVIADMTN--GGVDRSVECTGS  224 (329)
Q Consensus       203 ~~~~~~~~~~--~~~d~Vid~~g~  224 (329)
                      ..+.+.+...  +++|++|++.|.
T Consensus        92 v~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           92 LRELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCC
Confidence            3333333322  379999999883

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.14  E-value=0.016  Score=45.97  Aligned_cols=103  Identities=18%  Similarity=0.260  Sum_probs=67.8

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.....+.++.+||..|+|. |..+..+++.. . +|++++.+++..+.+++    .+...-+.....+  +.+.+... 
T Consensus        25 ~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~~~~~-   98 (192)
T 1l3i_A           25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGD--APEALCKI-   98 (192)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESC--HHHHHTTS-
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceEEEecC--HHHhcccC-
Confidence            34455778899999999876 88888888766 4 99999999988877665    3431111111122  33322211 


Q ss_pred             cCCccEEEEecC---CHHHHHHHHHhhccCCeEEEEec
Q 047713          212 NGGVDRSVECTG---SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       212 ~~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                       +.+|+|+....   ....+..+.++|+++ |.++...
T Consensus        99 -~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~  134 (192)
T 1l3i_A           99 -PDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (192)
T ss_dssp             -CCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             -CCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence             37999985532   245677888889998 9887764

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.14  E-value=0.016  Score=49.43  Aligned_cols=79  Identities=18%  Similarity=0.220  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|+++||+|+ |++|.+++..+...|+ +|+.+.+ +++..+.    +++.+....   .|..+. .+..+.++++..  
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~  105 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASE-SDFIEAIQTIVQSD  105 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHhc
Confidence            4789999986 9999999998888999 7877777 4444332    333443221   132221 123333433322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|+++|.
T Consensus       106 g~id~li~nAg~  117 (271)
T 4iin_A          106 GGLSYLVNNAGV  117 (271)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999884

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.13  E-value=0.014  Score=50.23  Aligned_cols=78  Identities=18%  Similarity=0.238  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce----eeCCCCCCchHHHHHHhhh--c
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE----FVNPKDYDKPVQQVIADMT--N  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~----~~~~~~~~~~~~~~~~~~~--~  212 (329)
                      +++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+    ++.+...    ..|..+. ++..+.+.+..  .
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM-TFAEQFVAQAGKLM  104 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCH-HHHHHHHHHHHHHc
Confidence            3689999987 9999999998888998 899998888766543    2334321    1233321 12333333222  1


Q ss_pred             CCccEEEEe-cC
Q 047713          213 GGVDRSVEC-TG  223 (329)
Q Consensus       213 ~~~d~Vid~-~g  223 (329)
                      +++|++|++ .|
T Consensus       105 g~iD~li~naag  116 (286)
T 1xu9_A          105 GGLDMLILNHIT  116 (286)
T ss_dssp             TSCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999988 44

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.13  E-value=0.012  Score=50.98  Aligned_cols=73  Identities=11%  Similarity=0.071  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHhcCCc--eeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFN-EAKKFGVT--EFVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      ++.+++|+|+|++|.+++..+...|+++|+++.++.++.+ ++++++..  .+++       +. .+.+.. .++|+||+
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~-------~~-~~~~~~-~~aDivIn  210 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS-------LA-EAETRL-AEYDIIIN  210 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC-------HH-HHHHTG-GGCSEEEE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee-------HH-HHHhhh-ccCCEEEE
Confidence            5789999999999999999999899878999988887754 45666542  1211       21 233222 25899999


Q ss_pred             ecCCH
Q 047713          221 CTGSV  225 (329)
Q Consensus       221 ~~g~~  225 (329)
                      +++.+
T Consensus       211 ~t~~~  215 (297)
T 2egg_A          211 TTSVG  215 (297)
T ss_dssp             CSCTT
T ss_pred             CCCCC
Confidence            99753

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.13  E-value=0.015  Score=49.26  Aligned_cols=78  Identities=21%  Similarity=0.370  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HHH-HHhc----CCce-e--eCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-FNE-AKKF----GVTE-F--VNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-~~~-~~~l----g~~~-~--~~~~~~~~~~~~~~~~~~~-  212 (329)
                      +++++||+|+ |++|.+++..+...|+ +|+.+++++++ .+. .+++    +... .  .|..+. +++.+.+.+... 
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~   80 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKG-EAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCH-HHHHHHHHHHHHh
Confidence            3688999986 9999999999888999 78888887665 433 2222    4322 1  233221 123333333322 


Q ss_pred             -CCccEEEEecC
Q 047713          213 -GGVDRSVECTG  223 (329)
Q Consensus       213 -~~~d~Vid~~g  223 (329)
                       +++|++|++.|
T Consensus        81 ~g~iD~lv~~Ag   92 (260)
T 1x1t_A           81 MGRIDILVNNAG   92 (260)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             36999999987

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.13  E-value=0.029  Score=48.02  Aligned_cols=79  Identities=18%  Similarity=0.216  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.++. ++++.+.    +++.+...   ..|..+.+ +..+.+.+...  
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~  105 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLS-SHQATVDAVVAEF  105 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGG-GHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHc
Confidence            4789999986 9999999999989999 7877764 5554432    23334322   22333322 24444443332  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|+++|.
T Consensus       106 g~iD~lvnnAg~  117 (280)
T 4da9_A          106 GRIDCLVNNAGI  117 (280)
T ss_dssp             SCCCEEEEECC-
T ss_pred             CCCCEEEECCCc
Confidence            379999999985

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.12  E-value=0.029  Score=47.94  Aligned_cols=79  Identities=24%  Similarity=0.338  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhhHH----HHHhcCCcee---eCCCCCCchH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN------------PSRFN----EAKKFGVTEF---VNPKDYDKPV  203 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~------------~~~~~----~~~~lg~~~~---~~~~~~~~~~  203 (329)
                      .|+++||+|+ +++|.++++.+...|+ +|+.++++            .++.+    .+++.+....   .|..+.+ +.
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v   86 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA-AL   86 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH-HH
Confidence            4789999986 9999999999999999 78888875            33322    2334444321   2333321 23


Q ss_pred             HHHHHhhhc--CCccEEEEecCC
Q 047713          204 QQVIADMTN--GGVDRSVECTGS  224 (329)
Q Consensus       204 ~~~~~~~~~--~~~d~Vid~~g~  224 (329)
                      .+.+++...  +++|++|++.|.
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCC
Confidence            333333322  379999999883

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.11  E-value=0.017  Score=48.61  Aligned_cols=76  Identities=16%  Similarity=0.277  Sum_probs=50.7

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---eeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVDRSV  219 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d~Vi  219 (329)
                      ++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+ ++++...   ..|..+. +++.+.+.+...  +++|++|
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNR-AAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHTSCTTTCCCCEEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCH-HHHHHHHHHHHHhCCCCCEEE
Confidence            6888886 9999999998888998 888888888776543 4444321   1233322 224444444433  2799999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      ++.|.
T Consensus        80 nnAg~   84 (248)
T 3asu_A           80 NNAGL   84 (248)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            98873

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.10  E-value=0.029  Score=47.72  Aligned_cols=87  Identities=14%  Similarity=0.139  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +++++|+|+|++|.+++..+...|. +|+++.++.++.+.+.+++.. .....+    +         ..+|+||++++.
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~~-~~~~~~----l---------~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGCD-CFMEPP----K---------SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTCE-EESSCC----S---------SCCSEEEECCTT
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-EecHHH----h---------ccCCEEEEcccC
Confidence            8899999999999999999999994 899999988887654477743 222221    1         158999998753


Q ss_pred             HH----HHH--HHHHhhccCCeEEEEecc
Q 047713          225 VQ----AMI--SAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       225 ~~----~~~--~~~~~l~~~~G~vv~~g~  247 (329)
                      .-    .+.  .....++++ ..++.+..
T Consensus       183 Gm~~~~~l~~~~l~~~l~~~-~~v~D~vY  210 (269)
T 3phh_A          183 SLHNELPLNKEVLKGYFKEG-KLAYDLAY  210 (269)
T ss_dssp             CCCCSCSSCHHHHHHHHHHC-SEEEESCC
T ss_pred             CCCCCCCCChHHHHhhCCCC-CEEEEeCC
Confidence            20    111  112256666 67776654

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.09  E-value=0.01  Score=49.19  Aligned_cols=104  Identities=17%  Similarity=0.209  Sum_probs=67.2

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--ceeeC-CCCCCchHHHHHHhhhcC
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV--TEFVN-PKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~--~~~~~-~~~~~~~~~~~~~~~~~~  213 (329)
                      .....++++++||-.|+|. |..+..+++..|..+|++++.+++..+.+++...  ..+.. ..+... .. ..... .+
T Consensus        67 l~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~-~~-~~~~~-~~  142 (230)
T 1fbn_A           67 LKVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANK-PQ-EYANI-VE  142 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTC-GG-GGTTT-SC
T ss_pred             ccccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCC-cc-ccccc-Cc
Confidence            3445677899999999876 8888889988774599999999988877665321  11110 011000 00 00011 14


Q ss_pred             CccEEEEecCCH----HHHHHHHHhhccCCeEEEEe
Q 047713          214 GVDRSVECTGSV----QAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       214 ~~d~Vid~~g~~----~~~~~~~~~l~~~~G~vv~~  245 (329)
                      .+|+|+.....+    ..+..+.+.|+++ |.++..
T Consensus       143 ~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  177 (230)
T 1fbn_A          143 KVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cEEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence            799998655443    3477888899998 988876

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.08  E-value=0.031  Score=48.38  Aligned_cols=78  Identities=24%  Similarity=0.397  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhhHH----HHHhcCCcee---eCCCCCCchH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN------------PSRFN----EAKKFGVTEF---VNPKDYDKPV  203 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~------------~~~~~----~~~~lg~~~~---~~~~~~~~~~  203 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.++++            .++.+    .+++.+....   .|..+.+ +.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v  104 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFD-AM  104 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHH-HH
Confidence            4789999986 9999999999989999 78888765            33332    2344454322   2333321 23


Q ss_pred             HHHHHhhhc--CCccEEEEecC
Q 047713          204 QQVIADMTN--GGVDRSVECTG  223 (329)
Q Consensus       204 ~~~~~~~~~--~~~d~Vid~~g  223 (329)
                      .+.+.+...  +++|++|++.|
T Consensus       105 ~~~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          105 QAAVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHhCCCCEEEECCC
Confidence            333333322  37999999887

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.08  E-value=0.021  Score=48.35  Aligned_cols=79  Identities=16%  Similarity=0.202  Sum_probs=50.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHH----HhcCCc-e--eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARV-SGASRIIGVDLNPSRFNEA----KKFGVT-E--FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~-~G~~~vv~~~~~~~~~~~~----~~lg~~-~--~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +++++||+|+ |.+|.+++..+.. .|+ +|+.++++.++.+.+    +..+.. .  ..|..+. .++...++++..  
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL-QSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCH-HHHHHHHHHHHHhc
Confidence            4789999986 9999999998877 898 888888887654432    222322 1  2233321 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|+++|.
T Consensus        81 g~id~li~~Ag~   92 (276)
T 1wma_A           81 GGLDVLVNNAGI   92 (276)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999999873

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.08  E-value=0.014  Score=48.09  Aligned_cols=103  Identities=15%  Similarity=0.070  Sum_probs=67.7

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcC-----CCEEEEEcCChhhHHHHHhc----C-----Ccee-eCCCCCCchHHH
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSG-----ASRIIGVDLNPSRFNEAKKF----G-----VTEF-VNPKDYDKPVQQ  205 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G-----~~~vv~~~~~~~~~~~~~~l----g-----~~~~-~~~~~~~~~~~~  205 (329)
                      .++++++||..|+|. |..++.+++..+     ..+|++++.+++..+.+++.    +     ...+ +...+....+..
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~  155 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE  155 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence            578899999999876 888889998875     22899999999888776553    3     1111 111110000100


Q ss_pred             HHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          206 VIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       206 ~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ..  ...+.+|+|+........++.+.+.|+++ |+++..-.
T Consensus       156 ~~--~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  194 (227)
T 2pbf_A          156 EK--KELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPIE  194 (227)
T ss_dssp             HH--HHHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEEE
T ss_pred             cC--ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEc
Confidence            00  11247999987766556678888999998 98887754

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.07  E-value=0.012  Score=49.12  Aligned_cols=78  Identities=15%  Similarity=0.210  Sum_probs=51.7

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcC--CCEEEEEcCChhhHHHHHhc-CCce---eeCCCCCCchHHHHHH---hhhcC-
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSG--ASRIIGVDLNPSRFNEAKKF-GVTE---FVNPKDYDKPVQQVIA---DMTNG-  213 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G--~~~vv~~~~~~~~~~~~~~l-g~~~---~~~~~~~~~~~~~~~~---~~~~~-  213 (329)
                      ++++||+|+ |.+|.+++..+...|  . +|+.+++++++.+.++++ +...   ..|..+. +.+.+.++   +..+. 
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCD-KSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCH-HHHHHHHHHHHHHHGGG
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCH-HHHHHHHHHHHHhcCCC
Confidence            578999986 999999999888889  7 899998888877766655 2211   1233221 12222222   22222 


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        81 ~id~li~~Ag~   91 (250)
T 1yo6_A           81 GLSLLINNAGV   91 (250)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCcc
Confidence            69999998873

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.07  E-value=0.016  Score=49.57  Aligned_cols=78  Identities=22%  Similarity=0.226  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc-CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN-GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~-~~  214 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.    +++.+...   ..|..+.+ +..+.+.+... ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~g~  109 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAG-AGTDLIERAEAIAP  109 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTT-HHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHH-HHHHHHHHHHHhCC
Confidence            4789999986 9999999999988999 88888887765433    23334322   22333332 23333332211 57


Q ss_pred             ccEEEEecC
Q 047713          215 VDRSVECTG  223 (329)
Q Consensus       215 ~d~Vid~~g  223 (329)
                      +|++|++.|
T Consensus       110 iD~lvnnAg  118 (275)
T 4imr_A          110 VDILVINAS  118 (275)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.06  E-value=0.014  Score=49.91  Aligned_cols=73  Identities=16%  Similarity=0.127  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      ++++++|+|+|++|.+++..+...|. +|+.+.++.++.+ ++++++....++..+    + +.+.+   +++|+|++++
T Consensus       118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~----~-~~~~~---~~~DivVn~t  188 (271)
T 1nyt_A          118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS----M-DELEG---HEFDLIINAT  188 (271)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC----S-GGGTT---CCCSEEEECC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEec----H-HHhcc---CCCCEEEECC
Confidence            58899999999999999999999996 8999988888764 455555311011111    1 01111   4699999999


Q ss_pred             CCH
Q 047713          223 GSV  225 (329)
Q Consensus       223 g~~  225 (329)
                      |..
T Consensus       189 ~~~  191 (271)
T 1nyt_A          189 SSG  191 (271)
T ss_dssp             SCG
T ss_pred             CCC
Confidence            864

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.06  E-value=0.013  Score=50.02  Aligned_cols=79  Identities=18%  Similarity=0.255  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---C---Cc-e--eeCCCCCCchHHHHHHhhhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF---G---VT-E--FVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l---g---~~-~--~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+ +++   .   .. .  ..|..+. +++.+.+++...
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~   82 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTD-AGQDEILSTTLG   82 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCH-HHHHHHHHHHHH
Confidence            3678999986 9999999998888999 888888888766543 233   2   11 1  1233322 123333333322


Q ss_pred             --CCccEEEEecCC
Q 047713          213 --GGVDRSVECTGS  224 (329)
Q Consensus       213 --~~~d~Vid~~g~  224 (329)
                        +++|++|++.|.
T Consensus        83 ~~g~id~lv~~Ag~   96 (278)
T 1spx_A           83 KFGKLDILVNNAGA   96 (278)
T ss_dssp             HHSCCCEEEECCC-
T ss_pred             HcCCCCEEEECCCC
Confidence              379999999874

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.06  E-value=0.024  Score=48.99  Aligned_cols=78  Identities=17%  Similarity=0.244  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc--------CCce---eeCCCCCCchHHHHHHhh
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF--------GVTE---FVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l--------g~~~---~~~~~~~~~~~~~~~~~~  210 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+ +++        +...   ..|..+. +++.+.+.+.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~   94 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE-EEVNNLVKST   94 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCH-HHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCH-HHHHHHHHHH
Confidence            4789999986 9999999998888998 888888887765432 221        2211   1233221 1233333332


Q ss_pred             hc--CCccEEEEecC
Q 047713          211 TN--GGVDRSVECTG  223 (329)
Q Consensus       211 ~~--~~~d~Vid~~g  223 (329)
                      ..  +++|++|+++|
T Consensus        95 ~~~~g~id~li~~Ag  109 (303)
T 1yxm_A           95 LDTFGKINFLVNNGG  109 (303)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            22  36999999987

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.05  E-value=0.095  Score=44.94  Aligned_cols=87  Identities=18%  Similarity=0.219  Sum_probs=60.8

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      .+|.|+|.|.+|...+..+...|. .|+..++++++.+.+.+.|....-     +  ..+.+.+     .|+||.++..+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~-----~--~~~~~~~-----aDvvi~~vp~~   68 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERAA-----T--PCEVVES-----CPVTFAMLADP   68 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEECS-----S--HHHHHHH-----CSEEEECCSSH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeecC-----C--HHHHHhc-----CCEEEEEcCCH
Confidence            468899999999999998888898 899999999998888877753221     1  3333332     68999888755


Q ss_pred             HHHHHHH-------HhhccCCeEEEEec
Q 047713          226 QAMISAF-------ECVHDGWGVAVLVG  246 (329)
Q Consensus       226 ~~~~~~~-------~~l~~~~G~vv~~g  246 (329)
                      ......+       ..++++ ..++..+
T Consensus        69 ~~~~~v~~~~~~l~~~l~~~-~~vi~~s   95 (287)
T 3pef_A           69 AAAEEVCFGKHGVLEGIGEG-RGYVDMS   95 (287)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence            5555444       345554 5555553

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.05  E-value=0.018  Score=51.09  Aligned_cols=79  Identities=24%  Similarity=0.320  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-----------HHHHHhcCCcee---eCCCCCCchHHHHHH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-----------FNEAKKFGVTEF---VNPKDYDKPVQQVIA  208 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-----------~~~~~~lg~~~~---~~~~~~~~~~~~~~~  208 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++           .+.+++.+....   .|..+.+ ++.+.+.
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~-~v~~~~~  121 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQ-QISAAVE  121 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHH
Confidence            4889999986 9999999998888899 78888776653           233445554322   2333322 2333343


Q ss_pred             hhhc--CCccEEEEecCC
Q 047713          209 DMTN--GGVDRSVECTGS  224 (329)
Q Consensus       209 ~~~~--~~~d~Vid~~g~  224 (329)
                      +...  +++|++|+++|.
T Consensus       122 ~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          122 KAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            3322  379999999883

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.05  E-value=0.015  Score=49.63  Aligned_cols=77  Identities=12%  Similarity=0.189  Sum_probs=50.9

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC--c-e--eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGV--T-E--FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~--~-~--~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      +++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+ +++..  . .  ..|..+. +++.+.+.+...  +++|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRDR-AAMSAAVDNLPEEFATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCH-HHHHHHHHTCCGGGSSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHhCCCC
Confidence            68999986 9999999999888999 888888888776543 33321  1 1  1233322 124444444332  3689


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|++.|.
T Consensus       100 ~lvnnAG~  107 (272)
T 2nwq_A          100 GLINNAGL  107 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.04  E-value=0.023  Score=48.43  Aligned_cols=79  Identities=13%  Similarity=0.047  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH-Hhc----CCce---eeCCCCCC---chHHHHHHhh
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNEA-KKF----GVTE---FVNPKDYD---KPVQQVIADM  210 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~~-~~l----g~~~---~~~~~~~~---~~~~~~~~~~  210 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++ ++++.+.+ +++    +...   ..|..+..   +++.+.+.+.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            4678999986 9999999998888999 8888888 77665432 222    4321   12443330   2233333332


Q ss_pred             hc--CCccEEEEecC
Q 047713          211 TN--GGVDRSVECTG  223 (329)
Q Consensus       211 ~~--~~~d~Vid~~g  223 (329)
                      ..  +++|++|++.|
T Consensus        89 ~~~~g~id~lv~nAg  103 (276)
T 1mxh_A           89 FRAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHhcCCCCEEEECCC
Confidence            22  37999999987

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.04  E-value=0.011  Score=49.80  Aligned_cols=102  Identities=25%  Similarity=0.259  Sum_probs=67.7

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh-
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM-  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~-  210 (329)
                      +.....+.++.+||-.|+|. |..+..+++..+. +|++++.+++..+.+++    .|...-+.....+  +    .+. 
T Consensus        28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d--~----~~~~   99 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND--A----AGYV   99 (256)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--C----TTCC
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECC--h----HhCC
Confidence            44556788999999999875 8888889988887 89999999988777654    3332101000011  0    011 


Q ss_pred             hcCCccEEEEec------CCHHHHHHHHHhhccCCeEEEEec
Q 047713          211 TNGGVDRSVECT------GSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       211 ~~~~~d~Vid~~------g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ..+.+|+|+-..      .....+..+.++|+++ |+++...
T Consensus       100 ~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  140 (256)
T 1nkv_A          100 ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  140 (256)
T ss_dssp             CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence            124799998421      2345678888899998 9888764

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.03  E-value=0.026  Score=48.21  Aligned_cols=76  Identities=20%  Similarity=0.261  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---eeCCCCCCchHHHHHHhhhc-CCccE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE---FVNPKDYDKPVQQVIADMTN-GGVDR  217 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~---~~~~~~~~~~~~~~~~~~~~-~~~d~  217 (329)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+. ++..+.+.+... +++|+
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~id~  106 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSE-DSVLAAIEAANQLGRLRY  106 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHTTSSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHhCCCCe
Confidence            3789999986 9999999998888999 899998888776553 4455432   1233322 224444444411 27899


Q ss_pred             EEEe
Q 047713          218 SVEC  221 (329)
Q Consensus       218 Vid~  221 (329)
                      +|.+
T Consensus       107 lv~~  110 (281)
T 3ppi_A          107 AVVA  110 (281)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9887

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.03  E-value=0.019  Score=48.97  Aligned_cols=79  Identities=19%  Similarity=0.226  Sum_probs=49.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.+.+ ++++.+.    +++.+....   .|..+. ++..+.+.+...  
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~v~~~~~~~~~~~  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQE-SEVEALFAAVIERW  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            4789999986 9999999998888999 6776666 5544433    233443221   233322 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus       105 g~id~lv~nAg~  116 (269)
T 4dmm_A          105 GRLDVLVNNAGI  116 (269)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.03  E-value=0.021  Score=47.82  Aligned_cols=77  Identities=23%  Similarity=0.316  Sum_probs=49.9

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF----GVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l----g~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+ +++    +...   ..|..+. +++.+.+++...  +
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADE-GDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhC
Confidence            578999986 9999999998888998 888888887766543 222    2211   1233221 123333333222  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|++.|
T Consensus        80 ~id~li~~Ag   89 (250)
T 2cfc_A           80 AIDVLVNNAG   89 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999887

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.02  E-value=0.034  Score=47.60  Aligned_cols=79  Identities=25%  Similarity=0.291  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhhHHH----HHhcCCce---eeCCCCCCchH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN------------PSRFNE----AKKFGVTE---FVNPKDYDKPV  203 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~------------~~~~~~----~~~lg~~~---~~~~~~~~~~~  203 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.++++            .++.+.    ++..+...   ..|..+. ++.
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v   86 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR-AAV   86 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH-HHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH-HHH
Confidence            4789999986 9999999999999999 78888765            443332    23344322   2233332 123


Q ss_pred             HHHHHhhhc--CCccEEEEecCC
Q 047713          204 QQVIADMTN--GGVDRSVECTGS  224 (329)
Q Consensus       204 ~~~~~~~~~--~~~d~Vid~~g~  224 (329)
                      .+.+.+...  +++|++|++.|.
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~  109 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGI  109 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCc
Confidence            333333322  379999999874

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.02  E-value=0.018  Score=49.29  Aligned_cols=96  Identities=10%  Similarity=0.068  Sum_probs=59.0

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +|||+|+ |.+|..+++.+... |. +|+++++++++...+...+...+ .|..+    . +.+.+.. .++|+||.+.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~d----~-~~l~~~~-~~~d~vi~~a~   74 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYFN----Q-ESMVEAF-KGMDTVVFIPS   74 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTTC----H-HHHHHHT-TTCSEEEECCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCCC----H-HHHHHHH-hCCCEEEEeCC
Confidence            5899987 99999999988776 77 78888888776544333343322 23322    1 2333333 26899999987


Q ss_pred             CH-------HHHHHHHHhhccC-CeEEEEeccCC
Q 047713          224 SV-------QAMISAFECVHDG-WGVAVLVGVPN  249 (329)
Q Consensus       224 ~~-------~~~~~~~~~l~~~-~G~vv~~g~~~  249 (329)
                      ..       ......++.+... -++++.++...
T Consensus        75 ~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           75 IIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            41       2223444444443 14788887643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.02  E-value=0.018  Score=48.37  Aligned_cols=79  Identities=20%  Similarity=0.273  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .+.++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+. +++.+.+++...  +
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE-QELSALADFAISKLG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHhcC
Confidence            4689999986 9999999998888898 888888887765432    2234322   1233221 123333333221  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|++.|.
T Consensus        88 ~~d~vi~~Ag~   98 (255)
T 1fmc_A           88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.01  E-value=0.027  Score=48.28  Aligned_cols=78  Identities=27%  Similarity=0.383  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC----------------hhhHHHH----HhcCCce---eeCCCCC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN----------------PSRFNEA----KKFGVTE---FVNPKDY  199 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~----------------~~~~~~~----~~lg~~~---~~~~~~~  199 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.++++                +++.+.+    +..+...   ..|..+.
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            4789999986 9999999999989999 78888765                4443322    2333322   1233332


Q ss_pred             CchHHHHHHhhhc--CCccEEEEecC
Q 047713          200 DKPVQQVIADMTN--GGVDRSVECTG  223 (329)
Q Consensus       200 ~~~~~~~~~~~~~--~~~d~Vid~~g  223 (329)
                      + +..+.+++...  +++|++|++.|
T Consensus        89 ~-~v~~~~~~~~~~~g~id~lv~nAg  113 (286)
T 3uve_A           89 D-ALKAAVDSGVEQLGRLDIIVANAG  113 (286)
T ss_dssp             H-HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             H-HHHHHHHHHHHHhCCCCEEEECCc
Confidence            1 23333333322  37999999988

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.01  E-value=0.028  Score=48.00  Aligned_cols=79  Identities=25%  Similarity=0.350  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhhHHH----HHhcCCcee---eCCCCCCchH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN------------PSRFNE----AKKFGVTEF---VNPKDYDKPV  203 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~------------~~~~~~----~~~lg~~~~---~~~~~~~~~~  203 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.++++            .++.+.    +++.+....   .|..+. +++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v   89 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR-ESL   89 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH-HHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH-HHH
Confidence            4789999986 9999999999989999 78888765            443332    233443221   233322 123


Q ss_pred             HHHHHhhhc--CCccEEEEecCC
Q 047713          204 QQVIADMTN--GGVDRSVECTGS  224 (329)
Q Consensus       204 ~~~~~~~~~--~~~d~Vid~~g~  224 (329)
                      .+.+.+...  +++|++|++.|.
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~  112 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            333333322  379999999884

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.01  E-value=0.025  Score=47.77  Aligned_cols=78  Identities=15%  Similarity=0.194  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCCce---eeCCCCCCchHHHHHHhhh---c
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KK---FGVTE---FVNPKDYDKPVQQVIADMT---N  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~---lg~~~---~~~~~~~~~~~~~~~~~~~---~  212 (329)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++   .+...   ..|..+. +++.+.+.+..   .
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQE-SEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSH-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCH-HHHHHHHHHHHHhcC
Confidence            3688999986 9999999999888999 888888887765432 22   24321   1233322 12333343332   3


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|++.|
T Consensus        82 g~id~lvnnAg   92 (260)
T 2qq5_A           82 GRLDVLVNNAY   92 (260)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCceEEEECCc
Confidence            57999999984

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.01  E-value=0.031  Score=47.13  Aligned_cols=95  Identities=24%  Similarity=0.345  Sum_probs=63.8

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcCCccE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~  217 (329)
                      ++++++||-.|+|. |..++.+++ .|. +|++++.++...+.+++    .+..  +.....+  +.+.   +..+.+|+
T Consensus       118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d--~~~~---~~~~~fD~  187 (254)
T 2nxc_A          118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGS--LEAA---LPFGPFDL  187 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESC--HHHH---GGGCCEEE
T ss_pred             cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECC--hhhc---CcCCCCCE
Confidence            57899999999865 777777666 577 99999999988877665    3332  1111122  3332   22347999


Q ss_pred             EEEecC---CHHHHHHHHHhhccCCeEEEEecc
Q 047713          218 SVECTG---SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       218 Vid~~g---~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      |+-..-   ....+....++|+++ |+++..+.
T Consensus       188 Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~  219 (254)
T 2nxc_A          188 LVANLYAELHAALAPRYREALVPG-GRALLTGI  219 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEECCcHHHHHHHHHHHHHHcCCC-CEEEEEee
Confidence            986542   124566777889998 99888653

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.00  E-value=0.016  Score=48.92  Aligned_cols=78  Identities=26%  Similarity=0.397  Sum_probs=49.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHhcCCcee---eCCCCCCchHHHHHHhhhc--CCc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR--FNEAKKFGVTEF---VNPKDYDKPVQQVIADMTN--GGV  215 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~--~~~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~~~  215 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++  .+.+++.+....   .|..+. +++.+.+.+...  +++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSDV-AQIEALFALAEREFGGV   80 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSH-HHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCH-HHHHHHHHHHHHHcCCC
Confidence            3678999986 9999999998888999 78888776541  222333343221   232221 123333333222  379


Q ss_pred             cEEEEecC
Q 047713          216 DRSVECTG  223 (329)
Q Consensus       216 d~Vid~~g  223 (329)
                      |++|++.|
T Consensus        81 d~lv~~Ag   88 (255)
T 2q2v_A           81 DILVNNAG   88 (255)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.00  E-value=0.014  Score=49.04  Aligned_cols=75  Identities=23%  Similarity=0.342  Sum_probs=48.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~Vi  219 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.++++++.    ++.+... ..|..+. +++.+.+++...  +++|++|
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVADA-AQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTCH-HHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            3689999986 9999999999988999 78888776542    2233221 1233322 123333433322  3799999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      ++.|.
T Consensus        80 ~~Ag~   84 (250)
T 2fwm_X           80 NAAGI   84 (250)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99873

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.99  E-value=0.082  Score=45.53  Aligned_cols=86  Identities=16%  Similarity=0.229  Sum_probs=60.7

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ  226 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~  226 (329)
                      +|.|+|+|.+|...+..+...|. .|+..++++++.+.+++.|....   .  +  ..+.+.     ..|+||.++..+.
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~---~--~--~~~~~~-----~~D~vi~~v~~~~   73 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA---S--T--AKAIAE-----QCDVIITMLPNSP   73 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC---S--S--HHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCeec---C--C--HHHHHh-----CCCEEEEECCCHH
Confidence            68899999999999988888888 79999999988888777665321   1  1  333332     3799999997555


Q ss_pred             HHHHHH-------HhhccCCeEEEEec
Q 047713          227 AMISAF-------ECVHDGWGVAVLVG  246 (329)
Q Consensus       227 ~~~~~~-------~~l~~~~G~vv~~g  246 (329)
                      .++..+       ..+.++ ..++.++
T Consensus        74 ~~~~~~~~~~~l~~~l~~~-~~vv~~s   99 (299)
T 1vpd_A           74 HVKEVALGENGIIEGAKPG-TVLIDMS   99 (299)
T ss_dssp             HHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHhCcchHhhcCCCC-CEEEECC
Confidence            555554       345565 5666554

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=95.99  E-value=0.012  Score=49.57  Aligned_cols=35  Identities=29%  Similarity=0.467  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      +.+|+|.|+|++|..+++.+...|..++..++.+.
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            57899999999999999999989988899998876

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=95.99  E-value=0.026  Score=47.29  Aligned_cols=79  Identities=23%  Similarity=0.373  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce----eeCCCCCCchHHHHHHhhh-cCCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE----FVNPKDYDKPVQQVIADMT-NGGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~----~~~~~~~~~~~~~~~~~~~-~~~~d  216 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+. .++++...    ..|..+.+ ++.+.+++.. .+++|
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~id   87 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDAE-AMTAAAAEAEAVAPVS   87 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHH-HHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHH-HHHHHHHHHHhhCCCc
Confidence            4789999986 9999999998888898 89999888776654 34444321    12333221 2322222221 24799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++|++.|.
T Consensus        88 ~li~~Ag~   95 (254)
T 2wsb_A           88 ILVNSAGI   95 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999873

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.98  E-value=0.023  Score=48.74  Aligned_cols=97  Identities=19%  Similarity=0.196  Sum_probs=64.0

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-----C--------ceeeCCCCCCchHHHHHHh
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG-----V--------TEFVNPKDYDKPVQQVIAD  209 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg-----~--------~~~~~~~~~~~~~~~~~~~  209 (329)
                      .++.+||+.|+|. |..+..+++. +..+|++++.+++..+.+++.-     .        ..-+.....+  ..+.+..
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D--~~~~l~~  149 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGD--GFEFIKN  149 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESC--HHHHHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECc--hHHHhcc
Confidence            4568999998764 6677777777 7669999999999988887632     0        0001111112  3333443


Q ss_pred             hhcCCccEEEEecC----------CHHHHHHHHHhhccCCeEEEEec
Q 047713          210 MTNGGVDRSVECTG----------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       210 ~~~~~~d~Vid~~g----------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                        .+.+|+|+-...          ..+.++.+.+.|+++ |.++...
T Consensus       150 --~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~  193 (281)
T 1mjf_A          150 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  193 (281)
T ss_dssp             --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             --cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence              457999874332          245678888999998 9887753

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.97  E-value=0.023  Score=47.99  Aligned_cols=78  Identities=21%  Similarity=0.220  Sum_probs=49.3

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHH-HHh---cCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR--FNE-AKK---FGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~--~~~-~~~---lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      ++++||+|+ |++|.+++..+...|+ +|+.+++++++  .+. .++   .+...   ..|..+. +++.+.+.+...  
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDK-ANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHh
Confidence            578999986 9999999998888899 78888887665  332 222   23321   1233322 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus        80 g~iD~lv~nAg~   91 (258)
T 3a28_C           80 GGFDVLVNNAGI   91 (258)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999873

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=95.97  E-value=0.017  Score=48.69  Aligned_cols=78  Identities=19%  Similarity=0.195  Sum_probs=49.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +++++||+|+ |.+|.+++..+...|+ +|+.+++ ++++.+.+    ++.+...   ..|..+. +++.+.+++...  
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   83 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE-SDVINLVQSAIKEF   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            3688999986 9999999998888899 7888887 66554432    2234321   1233221 123333333322  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|++.|
T Consensus        84 g~id~li~~Ag   94 (261)
T 1gee_A           84 GKLDVMINNAG   94 (261)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.95  E-value=0.03  Score=47.99  Aligned_cols=79  Identities=22%  Similarity=0.313  Sum_probs=49.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH-H---hc-CCce-e--eCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNEA-K---KF-GVTE-F--VNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~~-~---~l-g~~~-~--~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.+++ ++++.+.+ +   +. +... .  .|..+. +++.+.+.+... 
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~  101 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKP-SEIADMMAMVADR  101 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCH-HHHHHHHHHHHHH
Confidence            3689999986 9999999999999999 8888877 44444332 2   22 2221 1  122221 123333333322 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|++|+++|.
T Consensus       102 ~g~iD~lv~nAg~  114 (281)
T 3v2h_A          102 FGGADILVNNAGV  114 (281)
T ss_dssp             TSSCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence             379999999884

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.95  E-value=0.038  Score=48.47  Aligned_cols=77  Identities=18%  Similarity=0.246  Sum_probs=48.5

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-----hhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhh
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN-----PSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~-----~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~  211 (329)
                      ++++||+|+ |++|.+++..+...|+ +|+++.++     +++.+.+    ++.+...   ..|..+. .++.+.+++..
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~-~~v~~~~~~~~   82 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQ-VSVDRAIDQII   82 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCH-HHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCH-HHHHHHHHHHH
Confidence            678999986 9999999999999999 78876554     3333332    2334321   1233322 22444444432


Q ss_pred             c--CCccEEEEecC
Q 047713          212 N--GGVDRSVECTG  223 (329)
Q Consensus       212 ~--~~~d~Vid~~g  223 (329)
                      .  +++|++|+++|
T Consensus        83 ~~~g~iD~lVnnAG   96 (324)
T 3u9l_A           83 GEDGRIDVLIHNAG   96 (324)
T ss_dssp             HHHSCCSEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence            2  37999999998

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=95.94  E-value=0.026  Score=48.67  Aligned_cols=78  Identities=23%  Similarity=0.256  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HH----HHHhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-FN----EAKKFGVTEF---VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-~~----~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|+++||+|+ |++|.+++..+...|+ +|+.+++++++ .+    .+++.+....   .|..+.+ +..+.+.+...  
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQ-HCKDIVQETVRQL  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHHHc
Confidence            4789999986 9999999999988999 78877776542 22    2333443322   2333221 23333333322  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|++.|
T Consensus       124 g~iD~lvnnAg  134 (291)
T 3ijr_A          124 GSLNILVNNVA  134 (291)
T ss_dssp             SSCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999876

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=95.94  E-value=0.018  Score=49.00  Aligned_cols=77  Identities=22%  Similarity=0.206  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcC--Cce---eeCCCCCCchHHHHHHhhhcC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-K---KFG--VTE---FVNPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~---~lg--~~~---~~~~~~~~~~~~~~~~~~~~~  213 (329)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.. +   +.+  ...   ..|..+.+ .+.+.+++  -+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~-~~~~~~~~--~g   84 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQ-GCQDVIEK--YP   84 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHH-HHHHHHHH--CC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHH-HHHHHHHh--cC
Confidence            4789999986 9999999998888999 898888887765432 2   222  111   12222211 12222222  24


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+++++.|.
T Consensus        85 ~id~lv~nAg~   95 (267)
T 3t4x_A           85 KVDILINNLGI   95 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=95.94  E-value=0.014  Score=48.88  Aligned_cols=75  Identities=11%  Similarity=0.018  Sum_probs=48.6

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-c--CChhhHHHH-Hhc-CCceeeCCCCCCchHHHHHHhhhcCCccEE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-D--LNPSRFNEA-KKF-GVTEFVNPKDYDKPVQQVIADMTNGGVDRS  218 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~--~~~~~~~~~-~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~d~V  218 (329)
                      ++++||+|+ |++|.++++.+...|+ +|+.+ +  +++++.+.+ +++ +. .+.+..+- ..+.+.+.+.. +++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v-~~~~~~~~~~~-g~iD~l   76 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAEQKP-ERLVDATLQHG-EAIDTI   76 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCG-GGHHHHHGGGS-SCEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHH-HHHHHHHHHHc-CCCCEE
Confidence            468899986 9999999999988999 88888 5  777766543 444 32 22222221 12333333222 379999


Q ss_pred             EEecC
Q 047713          219 VECTG  223 (329)
Q Consensus       219 id~~g  223 (329)
                      |++.|
T Consensus        77 v~~Ag   81 (244)
T 1zmo_A           77 VSNDY   81 (244)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.93  E-value=0.018  Score=48.87  Aligned_cols=78  Identities=15%  Similarity=0.186  Sum_probs=48.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh---HHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR---FNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~---~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+.+...+   .+.    +++.+...   ..|..+.+ +..+.+.+...
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~   87 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEE-EVAKLFDFAEK   87 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHH
Confidence            4789999986 9999999999988999 78877654332   222    22234322   22333221 23333333322


Q ss_pred             --CCccEEEEecC
Q 047713          213 --GGVDRSVECTG  223 (329)
Q Consensus       213 --~~~d~Vid~~g  223 (329)
                        +++|++|++.|
T Consensus        88 ~~g~iD~lvnnAg  100 (262)
T 3ksu_A           88 EFGKVDIAINTVG  100 (262)
T ss_dssp             HHCSEEEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              37999999988

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.93  E-value=0.015  Score=48.95  Aligned_cols=79  Identities=25%  Similarity=0.368  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN-PSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~-~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.++++ +++.+.    ++..+...   ..|..+. +++.+.+++...  
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATS-EACQQLVDEFVAKF   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            3678999986 9999999998888999 78888776 554433    22224321   1233321 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|+++|.
T Consensus        84 g~id~vi~~Ag~   95 (258)
T 3afn_B           84 GGIDVLINNAGG   95 (258)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.91  E-value=0.021  Score=48.35  Aligned_cols=79  Identities=24%  Similarity=0.416  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-C-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCce----eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-G-AVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF---GVTE----FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g-~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l---g~~~----~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .++++||+|+ | ++|.+++..+...|+ +|+.+++++++.+.+ +++   +...    ..|..+. +++.+.+++... 
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~   98 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTST-EAVDALITQTVEK   98 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCH-HHHHHHHHHHHHH
Confidence            4789999987 6 799999998888899 898998888765443 222   2111    1233322 123333333322 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|++|++.|.
T Consensus        99 ~g~id~li~~Ag~  111 (266)
T 3o38_A           99 AGRLDVLVNNAGL  111 (266)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCcEEEECCCc
Confidence             379999999883

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=95.90  E-value=0.022  Score=48.99  Aligned_cols=79  Identities=25%  Similarity=0.361  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-----------HHHHHhcCCcee---eCCCCCCchHHHHHH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-----------FNEAKKFGVTEF---VNPKDYDKPVQQVIA  208 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-----------~~~~~~lg~~~~---~~~~~~~~~~~~~~~  208 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.+++++++           .+.+++.+....   .|..+.+ +..+.+.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~   85 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGD-AVAAAVA   85 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHH-HHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHH
Confidence            4789999986 9999999998888899 88888887652           223344454221   2333321 2333333


Q ss_pred             hhhc--CCccEEEEecCC
Q 047713          209 DMTN--GGVDRSVECTGS  224 (329)
Q Consensus       209 ~~~~--~~~d~Vid~~g~  224 (329)
                      +...  +++|++|++.|.
T Consensus        86 ~~~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           86 KTVEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHHHSCCSEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            3322  379999999883

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=95.90  E-value=0.032  Score=51.68  Aligned_cols=92  Identities=20%  Similarity=0.269  Sum_probs=67.3

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      -.|.+|.|+|.|.+|..+++.++.+|+ +|++++++..+.......|... .     +  +.+.+     ...|+|+.++
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~-~-----~--l~ell-----~~aDiVi~~~  340 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV-V-----T--MEYAA-----DKADIFVTAT  340 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE-C-----C--HHHHT-----TTCSEEEECS
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe-C-----C--HHHHH-----hcCCEEEECC
Confidence            468999999999999999999999999 8999999887754444556532 1     1  32222     2479999887


Q ss_pred             CCHHHH-HHHHHhhccCCeEEEEeccCC
Q 047713          223 GSVQAM-ISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       223 g~~~~~-~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +....+ ...++.++++ ..++.++...
T Consensus       341 ~t~~lI~~~~l~~MK~g-AilINvgrg~  367 (494)
T 3d64_A          341 GNYHVINHDHMKAMRHN-AIVCNIGHFD  367 (494)
T ss_dssp             SSSCSBCHHHHHHCCTT-EEEEECSSSS
T ss_pred             CcccccCHHHHhhCCCC-cEEEEcCCCc
Confidence            654444 3566788987 8888887643

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=95.89  E-value=0.032  Score=48.17  Aligned_cols=78  Identities=14%  Similarity=0.181  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCce---eeCCCCCCchHHHHHHhhh--c
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF----GVTE---FVNPKDYDKPVQQVIADMT--N  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l----g~~~---~~~~~~~~~~~~~~~~~~~--~  212 (329)
                      .+.++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+ +++    +...   ..|..+. +++.+.+.+..  .
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~  102 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP-DMVQNTVSELIKVA  102 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH-HHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCH-HHHHHHHHHHHHHc
Confidence            4789999986 9999999998888999 888888887765432 222    4321   1233321 12333333322  2


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +.+|++|+++|
T Consensus       103 g~id~li~~Ag  113 (302)
T 1w6u_A          103 GHPNIVINNAA  113 (302)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37899999987

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=95.89  E-value=0.02  Score=48.62  Aligned_cols=73  Identities=18%  Similarity=0.262  Sum_probs=47.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~Vi  219 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++     .-.... ..|..+. +++.+.+++...  +++|++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~iD~lv   79 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDVTNP-DQVKASIDHIFKEYGSISVLV   79 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCTTCH-HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            3689999986 9999999999988999 78888776554     111111 1233322 123333333322  3699999


Q ss_pred             EecC
Q 047713          220 ECTG  223 (329)
Q Consensus       220 d~~g  223 (329)
                      ++.|
T Consensus        80 ~~Ag   83 (264)
T 2dtx_A           80 NNAG   83 (264)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=95.88  E-value=0.025  Score=47.21  Aligned_cols=101  Identities=15%  Similarity=0.161  Sum_probs=65.6

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh----
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT----  211 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~----  211 (329)
                      ...++++||-+|+| .|..++.+|+.+. ..+|++++.+++..+.+++    .|...-+.....+  ..+.+..+.    
T Consensus        67 ~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd--a~~~l~~l~~~~~  143 (237)
T 3c3y_A           67 KLVNAKKTIEVGVF-TGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESD--AMLALDNLLQGQE  143 (237)
T ss_dssp             HHTTCCEEEEECCT-TSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHSTT
T ss_pred             HhhCCCEEEEeCCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhccC
Confidence            34567899999876 4778888888763 2399999999988777654    3543222222222  444343332    


Q ss_pred             -cCCccEEEEecC---CHHHHHHHHHhhccCCeEEEEe
Q 047713          212 -NGGVDRSVECTG---SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       212 -~~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                       .+.+|+||-...   ....++.+.++|+++ |.++.-
T Consensus       144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d  180 (237)
T 3c3y_A          144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYD  180 (237)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEe
Confidence             347999984332   235678888999997 887754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=95.87  E-value=0.035  Score=47.38  Aligned_cols=79  Identities=28%  Similarity=0.418  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-------------ChhhHHH----HHhcCCce---eeCCCCCCch
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-------------NPSRFNE----AKKFGVTE---FVNPKDYDKP  202 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-------------~~~~~~~----~~~lg~~~---~~~~~~~~~~  202 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++             +.++.+.    ++..+...   ..|..+. ++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~   87 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF-DR   87 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HH
Confidence            4789999986 9999999999989999 7888876             3444332    23334322   1233322 12


Q ss_pred             HHHHHHhhhc--CCccEEEEecCC
Q 047713          203 VQQVIADMTN--GGVDRSVECTGS  224 (329)
Q Consensus       203 ~~~~~~~~~~--~~~d~Vid~~g~  224 (329)
                      ..+.+.+...  +++|++|++.|.
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCC
Confidence            3333333322  369999999873

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.87  E-value=0.047  Score=47.51  Aligned_cols=88  Identities=18%  Similarity=0.284  Sum_probs=62.9

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++ +.+.++|+...      +  +.+.++     ..|+|+.++.
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~------~--l~ell~-----~aDvV~l~~p  205 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV------D--LETLLK-----ESDVVTIHVP  205 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC------C--HHHHHH-----HCSEEEECCC
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc------C--HHHHHh-----hCCEEEEecC
Confidence            58899999999999999999999999 89999887766 55667776421      1  333332     2688888875


Q ss_pred             CHH----HH-HHHHHhhccCCeEEEEecc
Q 047713          224 SVQ----AM-ISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       224 ~~~----~~-~~~~~~l~~~~G~vv~~g~  247 (329)
                      ..+    .+ ...+..++++ +.++.++.
T Consensus       206 ~~~~t~~li~~~~l~~mk~g-a~lin~ar  233 (307)
T 1wwk_A          206 LVESTYHLINEERLKLMKKT-AILINTSR  233 (307)
T ss_dssp             CSTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred             CChHHhhhcCHHHHhcCCCC-eEEEECCC
Confidence            322    12 3456678886 77777764

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.86  E-value=0.029  Score=46.05  Aligned_cols=101  Identities=14%  Similarity=0.130  Sum_probs=65.9

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhc---
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTN---  212 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~---  212 (329)
                      ...++.+||-.|+|. |..++.+++.++ ..+|++++.+++..+.+++    .+....+.....+  ..+.+.....   
T Consensus        61 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~~  137 (225)
T 3tr6_A           61 KLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSP--AKDTLAELIHAGQ  137 (225)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHTTTC
T ss_pred             HhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCC--HHHHHHHhhhccC
Confidence            345678999998864 888888888764 3499999999988777654    3443211111222  4344433332   


Q ss_pred             -CCccEEEEecC---CHHHHHHHHHhhccCCeEEEEe
Q 047713          213 -GGVDRSVECTG---SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       213 -~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                       +.+|+|+-...   ....++.+.++|+++ |.++.-
T Consensus       138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~  173 (225)
T 3tr6_A          138 AWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVD  173 (225)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence             47999984332   234578888999998 988764

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=95.86  E-value=0.05  Score=44.91  Aligned_cols=75  Identities=13%  Similarity=0.133  Sum_probs=48.4

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCce---eeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVTE---FVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      +++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+. +++...   ..|..+.+ +..+.+.+. ...+|++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~-~~~~d~lv~   78 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQ-EVEQLFEQL-DSIPSTVVH   78 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHH-HHHHHHHSC-SSCCSEEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHH-HHHHHHHHH-hhcCCEEEE
Confidence            46899986 9999999999989999 7888888888776543 443221   22332211 122222222 234599999


Q ss_pred             ecC
Q 047713          221 CTG  223 (329)
Q Consensus       221 ~~g  223 (329)
                      +.|
T Consensus        79 ~Ag   81 (230)
T 3guy_A           79 SAG   81 (230)
T ss_dssp             CCC
T ss_pred             eCC
Confidence            987

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.85  E-value=0.013  Score=52.17  Aligned_cols=48  Identities=25%  Similarity=0.412  Sum_probs=41.0

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHhcCCc
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFN-EAKKFGVT  191 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~-~~~~lg~~  191 (329)
                      -+|.+|+|.|.|.+|..+++.+...|+ +|++.+.+.++.+ ++++++++
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            468999999999999999999999999 7889998888766 45666754

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.85  E-value=0.13  Score=42.45  Aligned_cols=91  Identities=20%  Similarity=0.054  Sum_probs=55.5

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-hH-HHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS-RF-NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~-~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      .|.+|||.|+|.+|...+..+...|+ .|++++.... .. +++++.+... +. .....        ..-.++|+||-+
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~-i~-~~~~~--------~dL~~adLVIaA   98 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRV-KR-KKVGE--------EDLLNVFFIVVA   98 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEE-EC-SCCCG--------GGSSSCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEE-EE-CCCCH--------hHhCCCCEEEEC
Confidence            37899999999999999999999999 6777765332 22 2333322322 21 12110        001269999999


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          222 TGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ++.+..-...... +.. |..+-...
T Consensus        99 T~d~~~N~~I~~~-ak~-gi~VNvvD  122 (223)
T 3dfz_A           99 TNDQAVNKFVKQH-IKN-DQLVNMAS  122 (223)
T ss_dssp             CCCTHHHHHHHHH-SCT-TCEEEC--
T ss_pred             CCCHHHHHHHHHH-HhC-CCEEEEeC
Confidence            9875443444444 445 87776654

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=95.85  E-value=0.0036  Score=49.97  Aligned_cols=100  Identities=12%  Similarity=0.143  Sum_probs=64.2

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcCCc
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNGGV  215 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (329)
                      ..++++++||-.|+|. |..++.+++. +. +|++++.+++..+.+++    .+...+-.... +  . ..+.....+.+
T Consensus        18 ~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~-~--~-~~l~~~~~~~f   90 (185)
T 3mti_A           18 EVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILD-G--H-ENLDHYVREPI   90 (185)
T ss_dssp             TTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEES-C--G-GGGGGTCCSCE
T ss_pred             HhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-c--H-HHHHhhccCCc
Confidence            4567899999888874 8888888877 66 99999999988777654    34322111111 1  1 11222233479


Q ss_pred             cEEEEecCC---------------HHHHHHHHHhhccCCeEEEEecc
Q 047713          216 DRSVECTGS---------------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       216 d~Vid~~g~---------------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      |+|+-..+.               ...+..+.+.|+++ |+++.+..
T Consensus        91 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  136 (185)
T 3mti_A           91 RAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIY  136 (185)
T ss_dssp             EEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             CEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            998755321               12357777899998 99887754

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=95.84  E-value=0.037  Score=46.51  Aligned_cols=100  Identities=17%  Similarity=0.196  Sum_probs=65.8

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh---
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVS--GASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT---  211 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~--G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~---  211 (329)
                      ...++++||-+|+| .|..++.+|+.+  +. +|++++.+++..+.+++    .|...-+.....+  ..+.+..+.   
T Consensus        76 ~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gd--a~~~l~~l~~~~  151 (247)
T 1sui_A           76 KLINAKNTMEIGVY-TGYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFREGP--ALPVLDEMIKDE  151 (247)
T ss_dssp             HHTTCCEEEEECCG-GGHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHSG
T ss_pred             HhhCcCEEEEeCCC-cCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC--HHHHHHHHHhcc
Confidence            34567899999876 488888888876  45 99999999988777654    3442212122222  333333332   


Q ss_pred             --cCCccEEEEecC---CHHHHHHHHHhhccCCeEEEEe
Q 047713          212 --NGGVDRSVECTG---SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       212 --~~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                        .+.||+||-...   ....++.+.++|+++ |.++.-
T Consensus       152 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d  189 (247)
T 1sui_A          152 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYD  189 (247)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEE
T ss_pred             CCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEe
Confidence              347999984332   245678888999998 988754

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.84  E-value=0.11  Score=45.19  Aligned_cols=74  Identities=19%  Similarity=0.234  Sum_probs=54.6

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      .+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+...-     +  ..+.+.+     .|+||.++..+
T Consensus        22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~~-----~--~~~~~~~-----aDvvi~~vp~~   88 (310)
T 3doj_A           22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVCE-----S--PAEVIKK-----CKYTIAMLSDP   88 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEECS-----S--HHHHHHH-----CSEEEECCSSH
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEcC-----C--HHHHHHh-----CCEEEEEcCCH
Confidence            579999999999999998888898 899999999998888887764221     1  3333322     58888888665


Q ss_pred             HHHHHHH
Q 047713          226 QAMISAF  232 (329)
Q Consensus       226 ~~~~~~~  232 (329)
                      ......+
T Consensus        89 ~~~~~v~   95 (310)
T 3doj_A           89 CAALSVV   95 (310)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            5555444

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=95.84  E-value=0.026  Score=48.46  Aligned_cols=79  Identities=18%  Similarity=0.233  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhh--cC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMT--NG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~--~~  213 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+.+++++.+.+    ++.+...   ..|..+. +++.+.+++..  .+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK-EEISEVINKILTEHK  120 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCH-HHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCH-HHHHHHHHHHHHhcC
Confidence            3679999986 9999999998888898 788888777665432    2234322   1233322 12333333332  23


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|+++|.
T Consensus       121 ~id~li~~Ag~  131 (285)
T 2c07_A          121 NVDILVNNAGI  131 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.84  E-value=0.04  Score=47.03  Aligned_cols=70  Identities=13%  Similarity=0.153  Sum_probs=50.5

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC--ceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV--TEFVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      .+++++|+|+|++|.+++..+...|+++|+.+.++.++.+. +++++.  .......+           +....+|+||+
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~-----------l~~~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA-----------LEGQSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG-----------GTTCCCSEEEE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH-----------hcccCCCEEEE
Confidence            58899999999999999998888997789889888887654 455553  12222111           11136899999


Q ss_pred             ecCC
Q 047713          221 CTGS  224 (329)
Q Consensus       221 ~~g~  224 (329)
                      +++.
T Consensus       188 aTp~  191 (272)
T 3pwz_A          188 ATSA  191 (272)
T ss_dssp             CSSG
T ss_pred             CCCC
Confidence            9854

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=95.81  E-value=0.013  Score=50.00  Aligned_cols=77  Identities=18%  Similarity=0.253  Sum_probs=48.9

Q ss_pred             CCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhc--CCccE
Q 047713          142 PKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTN--GGVDR  217 (329)
Q Consensus       142 ~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~--~~~d~  217 (329)
                      -..|++|||+|+ +++|.+++..+...|+ +|+.+++++++..   . ... ...|..+.+ +..+.+.+...  +++|+
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~---~-~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV---N-VSDHFKIDVTNEE-EVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT---T-SSEEEECCTTCHH-HHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc---C-ceeEEEecCCCHH-HHHHHHHHHHHHcCCCCE
Confidence            456899999986 9999999998888999 7888887665431   1 111 122333321 23333333322  37999


Q ss_pred             EEEecCC
Q 047713          218 SVECTGS  224 (329)
Q Consensus       218 Vid~~g~  224 (329)
                      +|+++|.
T Consensus        85 lv~nAg~   91 (269)
T 3vtz_A           85 LVNNAGI   91 (269)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999873

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.81  E-value=0.032  Score=48.80  Aligned_cols=79  Identities=28%  Similarity=0.402  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC----------hhhH----HHHHhcCCceee---CCCCCCchHHH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN----------PSRF----NEAKKFGVTEFV---NPKDYDKPVQQ  205 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~----------~~~~----~~~~~lg~~~~~---~~~~~~~~~~~  205 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.++++          .++.    +.+++.+....+   |..+. ++..+
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~  103 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW-DQAAG  103 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH-HHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHH
Confidence            4789999986 9999999998888999 88888765          3332    223344443222   22221 12333


Q ss_pred             HHHhhhc--CCccEEEEecCC
Q 047713          206 VIADMTN--GGVDRSVECTGS  224 (329)
Q Consensus       206 ~~~~~~~--~~~d~Vid~~g~  224 (329)
                      .+.+...  +++|++|+++|.
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            3333322  379999999883

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=95.78  E-value=0.034  Score=45.59  Aligned_cols=102  Identities=12%  Similarity=0.053  Sum_probs=65.7

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhc---
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTN---  212 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~---  212 (329)
                      ...++.+||-.|+| .|..++.+|+... ..+|++++.+++..+.+++    .|....+.....+  ..+.+..+..   
T Consensus        55 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~~  131 (223)
T 3duw_A           55 QIQGARNILEIGTL-GGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGL--ALDSLQQIENEKY  131 (223)
T ss_dssp             HHHTCSEEEEECCT-TSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHHTTC
T ss_pred             HhhCCCEEEEecCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhcCC
Confidence            34568899999887 4888888888763 2399999999988776654    3543211111222  3333333322   


Q ss_pred             CCccEEEEecC---CHHHHHHHHHhhccCCeEEEEec
Q 047713          213 GGVDRSVECTG---SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       213 ~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +.+|+||-...   ....++.+.+.|+++ |.++.-.
T Consensus       132 ~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~  167 (223)
T 3duw_A          132 EPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDN  167 (223)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEES
T ss_pred             CCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeC
Confidence            36999984332   235678888999998 9777643

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.78  E-value=0.045  Score=47.74  Aligned_cols=40  Identities=20%  Similarity=0.239  Sum_probs=34.4

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC---hhhHH
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN---PSRFN  183 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~---~~~~~  183 (329)
                      .|+++||+|+|++|.+++..+...|+++|+.+.++   .++.+
T Consensus       153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~  195 (315)
T 3tnl_A          153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAE  195 (315)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHH
T ss_pred             cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHH
Confidence            58899999999999999999999999788888888   55544

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=95.78  E-value=0.018  Score=47.95  Aligned_cols=96  Identities=9%  Similarity=0.045  Sum_probs=58.5

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      .+|||+|+ |.+|.++++.+...| . +|+++++++++.+.+...+...+ .|..+     .+.+.++.. ++|+||.+.
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d-----~~~~~~~~~-~~D~vv~~a   96 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQIIMGDVLN-----HAALKQAMQ-GQDIVYANL   96 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEEEEECCTTC-----HHHHHHHHT-TCSEEEEEC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcEEEEecCCC-----HHHHHHHhc-CCCEEEEcC
Confidence            57999986 999999999998888 6 88888888766432211122211 12222     122333322 589999998


Q ss_pred             CCHHH---HHHHHHhhccC-CeEEEEeccC
Q 047713          223 GSVQA---MISAFECVHDG-WGVAVLVGVP  248 (329)
Q Consensus       223 g~~~~---~~~~~~~l~~~-~G~vv~~g~~  248 (329)
                      |....   .+..++.+... .++++.++..
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~  126 (236)
T 3qvo_A           97 TGEDLDIQANSVIAAMKACDVKRLIFVLSL  126 (236)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CCCchhHHHHHHHHHHHHcCCCEEEEEecc
Confidence            75332   23344444432 2688888753

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.78  E-value=0.034  Score=48.84  Aligned_cols=40  Identities=18%  Similarity=0.140  Sum_probs=33.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHHH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD-LNPSRFNE  184 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~-~~~~~~~~  184 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.++ +++++.+.
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~   86 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANA   86 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHH
Confidence            4688999986 9999999999999999 788888 77766543

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=95.77  E-value=0.059  Score=47.54  Aligned_cols=89  Identities=18%  Similarity=0.246  Sum_probs=60.8

Q ss_pred             CeEEEEcCCHHHHHHHHHHH-H-cCCCEEEEEcCChhhHHH-HHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEe
Q 047713          146 QSVAIFGLGAVGLAAAEGAR-V-SGASRIIGVDLNPSRFNE-AKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVEC  221 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~-~-~G~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~  221 (329)
                      -+|.|+|+|.+|...++.++ . -+.+.+.+++.++++.+. .+++|...+++  +    +    .++... ++|+|+.+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~--~----~----~~~l~~~~~D~V~i~   78 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT--N----Y----KDMIDTENIDAIFIV   78 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES--C----H----HHHHTTSCCSEEEEC
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC--C----H----HHHhcCCCCCEEEEe
Confidence            37889999999998887766 4 366334556777777654 56677654432  1    3    233333 79999999


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEEec
Q 047713          222 TGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ++...+.+.+..+++.  |+.+.+.
T Consensus        79 tp~~~h~~~~~~al~~--G~~v~~e  101 (346)
T 3cea_A           79 APTPFHPEMTIYAMNA--GLNVFCE  101 (346)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEEC
T ss_pred             CChHhHHHHHHHHHHC--CCEEEEc
Confidence            9877778888888886  5555554

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.77  E-value=0.074  Score=48.20  Aligned_cols=93  Identities=16%  Similarity=0.148  Sum_probs=60.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCC--CEEEEEcCChhhHHHH-HhcC------Cce-eeCCCCCCchHHHHHHhhhcC-Cc
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGA--SRIIGVDLNPSRFNEA-KKFG------VTE-FVNPKDYDKPVQQVIADMTNG-GV  215 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~--~~vv~~~~~~~~~~~~-~~lg------~~~-~~~~~~~~~~~~~~~~~~~~~-~~  215 (329)
                      +|+|+|+|.+|..++..+...|.  ..|+.++++.++.+.+ ++++      ... .+|..+     .+.+.++..+ ++
T Consensus         3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d-----~~~l~~~l~~~~~   77 (405)
T 4ina_A            3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS-----IEELVALINEVKP   77 (405)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC-----HHHHHHHHHHHCC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC-----HHHHHHHHHhhCC
Confidence            68999999999999998877773  3788888888876643 3332      211 222222     1223333333 68


Q ss_pred             cEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713          216 DRSVECTGSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       216 d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      |+||+++|..........++..+ -+++.+
T Consensus        78 DvVin~ag~~~~~~v~~a~l~~g-~~vvD~  106 (405)
T 4ina_A           78 QIVLNIALPYQDLTIMEACLRTG-VPYLDT  106 (405)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHHT-CCEEES
T ss_pred             CEEEECCCcccChHHHHHHHHhC-CCEEEe
Confidence            99999998654555556667765 666654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.76  E-value=0.038  Score=48.30  Aligned_cols=78  Identities=24%  Similarity=0.366  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhhHH----HHHhcCCcee---eCCCCCCchH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN------------PSRFN----EAKKFGVTEF---VNPKDYDKPV  203 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~------------~~~~~----~~~~lg~~~~---~~~~~~~~~~  203 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.++.+            .++.+    .+++.+....   .|..+. +++
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v  122 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL-ASL  122 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHH
Confidence            5789999986 9999999999989999 78887654            33332    2334444322   233322 123


Q ss_pred             HHHHHhhhc--CCccEEEEecC
Q 047713          204 QQVIADMTN--GGVDRSVECTG  223 (329)
Q Consensus       204 ~~~~~~~~~--~~~d~Vid~~g  223 (329)
                      .+.+.+...  +++|++|+++|
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg  144 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVG  144 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCC
Confidence            333333322  37999999988

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.75  E-value=0.14  Score=39.26  Aligned_cols=77  Identities=5%  Similarity=0.038  Sum_probs=50.4

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC-hhhHHHHHh---cCCceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN-PSRFNEAKK---FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~-~~~~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      ..+++|.|+|.+|...++.+...|. .|++++.+ +++.+.+++   .|...+.- +..+   .+.+++..-.++|+|+-
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~~i~g-d~~~---~~~l~~a~i~~ad~vi~   77 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIPG-DSND---SSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEES-CTTS---HHHHHHHTTTTCSEEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCeEEEc-CCCC---HHHHHHcChhhCCEEEE
Confidence            4678999999999999999998998 78888886 455544432   24433321 1111   22344432337999999


Q ss_pred             ecCCHH
Q 047713          221 CTGSVQ  226 (329)
Q Consensus       221 ~~g~~~  226 (329)
                      +++...
T Consensus        78 ~~~~d~   83 (153)
T 1id1_A           78 LSDNDA   83 (153)
T ss_dssp             CSSCHH
T ss_pred             ecCChH
Confidence            987643

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=95.74  E-value=0.022  Score=50.19  Aligned_cols=100  Identities=20%  Similarity=0.178  Sum_probs=65.4

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC------C-ceeeCCCCCCchHHHHHHhhhcCC
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG------V-TEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg------~-~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      ..++.+||++|+| .|..+..+++..+..+|++++.+++..+.+++.-      . ..-+.....+  ..+.+.....+.
T Consensus       118 ~~~~~~VLdIG~G-~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D--~~~~l~~~~~~~  194 (334)
T 1xj5_A          118 IPNPKKVLVIGGG-DGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGD--GVAFLKNAAEGS  194 (334)
T ss_dssp             SSCCCEEEEETCS-SSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESC--HHHHHHTSCTTC
T ss_pred             CCCCCEEEEECCC-ccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECC--HHHHHHhccCCC
Confidence            3567899999875 3667777887765559999999999888877631      1 0001111122  444444333347


Q ss_pred             ccEEEE-ec---C------CHHHHHHHHHhhccCCeEEEEe
Q 047713          215 VDRSVE-CT---G------SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       215 ~d~Vid-~~---g------~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      +|+|+- ..   +      ....++.+.+.|+++ |.++.-
T Consensus       195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~  234 (334)
T 1xj5_A          195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ  234 (334)
T ss_dssp             EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            999884 22   1      246788889999998 998875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=95.73  E-value=0.071  Score=45.96  Aligned_cols=79  Identities=19%  Similarity=0.204  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHH----HHHhcCCceee---CCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP--SRFN----EAKKFGVTEFV---NPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~--~~~~----~~~~lg~~~~~---~~~~~~~~~~~~~~~~~~-  212 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.++.+.  ++.+    .+++.+....+   |..+. ++..+.+.+... 
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~  125 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDE-SFARSLVHKAREA  125 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCH-HHHHHHHHHHHHH
Confidence            4789999986 9999999999989999 788877652  2222    23344543322   22221 123333333322 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|+++++.|.
T Consensus       126 ~g~iD~lv~nAg~  138 (294)
T 3r3s_A          126 LGGLDILALVAGK  138 (294)
T ss_dssp             HTCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999999873

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.73  E-value=0.065  Score=44.49  Aligned_cols=95  Identities=16%  Similarity=0.149  Sum_probs=64.8

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      ++++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++. . ..+   ..+  ..+.+..+..+.+|+|+-.
T Consensus        39 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~-~-~~~---~~d--~~~~~~~~~~~~fD~i~~~  108 (240)
T 3dli_A           39 FKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK-F-NVV---KSD--AIEYLKSLPDKYLDGVMIS  108 (240)
T ss_dssp             TTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT-S-EEE---CSC--HHHHHHTSCTTCBSEEEEE
T ss_pred             hcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh-c-cee---ecc--HHHHhhhcCCCCeeEEEEC
Confidence            56789999998753 5556666665 77 799999999999888876 2 222   122  4333334444589999853


Q ss_pred             c-----CC---HHHHHHHHHhhccCCeEEEEecc
Q 047713          222 T-----GS---VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       222 ~-----g~---~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .     ..   ...+..+.++|+++ |.++....
T Consensus       109 ~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  141 (240)
T 3dli_A          109 HFVEHLDPERLFELLSLCYSKMKYS-SYIVIESP  141 (240)
T ss_dssp             SCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEEE
T ss_pred             CchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            2     11   35678888899998 99887643

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=95.73  E-value=0.038  Score=47.55  Aligned_cols=40  Identities=18%  Similarity=0.140  Sum_probs=33.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHHH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD-LNPSRFNE  184 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~-~~~~~~~~  184 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.++ +++++.+.
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~   49 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANA   49 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHH
Confidence            4788999986 9999999999988999 788888 77766543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.72  E-value=0.12  Score=45.12  Aligned_cols=89  Identities=15%  Similarity=0.197  Sum_probs=61.8

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      ..+|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+...-+       ..+.++     ..|+||.++..
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~~~-------~~e~~~-----~aDvVi~~vp~   97 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIHEQ-------ARAAAR-----DADIVVSMLEN   97 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEESS-------HHHHHT-----TCSEEEECCSS
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEeeCC-------HHHHHh-----cCCEEEEECCC
Confidence            4589999999999999998888898 8999999999988887777543211       222222     36888888876


Q ss_pred             HHHHHHHHH------hhccCCeEEEEecc
Q 047713          225 VQAMISAFE------CVHDGWGVAVLVGV  247 (329)
Q Consensus       225 ~~~~~~~~~------~l~~~~G~vv~~g~  247 (329)
                      +......+.      .+.++ ..++.++.
T Consensus        98 ~~~~~~v~~~~~~~~~l~~~-~~vi~~st  125 (320)
T 4dll_A           98 GAVVQDVLFAQGVAAAMKPG-SLFLDMAS  125 (320)
T ss_dssp             HHHHHHHHTTTCHHHHCCTT-CEEEECSC
T ss_pred             HHHHHHHHcchhHHhhCCCC-CEEEecCC
Confidence            555554442      34554 55555543

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.72  E-value=0.062  Score=46.88  Aligned_cols=89  Identities=18%  Similarity=0.292  Sum_probs=63.6

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      -.|.+|.|+|.|.+|...++.++.+|. +|++.+++.++. .++++|+...      +  +.+.++     ..|+|+.++
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~~------~--l~ell~-----~aDvVvl~~  204 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKAV------S--LEELLK-----NSDVISLHV  204 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEEC------C--HHHHHH-----HCSEEEECC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCceec------C--HHHHHh-----hCCEEEEec
Confidence            358899999999999999999999999 899998877664 4566776421      1  333333     268998887


Q ss_pred             CCHH----HH-HHHHHhhccCCeEEEEecc
Q 047713          223 GSVQ----AM-ISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       223 g~~~----~~-~~~~~~l~~~~G~vv~~g~  247 (329)
                      ...+    .+ ...+..++++ +.++.++.
T Consensus       205 P~~~~t~~li~~~~l~~mk~g-a~lIn~ar  233 (313)
T 2ekl_A          205 TVSKDAKPIIDYPQFELMKDN-VIIVNTSR  233 (313)
T ss_dssp             CCCTTSCCSBCHHHHHHSCTT-EEEEESSC
T ss_pred             cCChHHHHhhCHHHHhcCCCC-CEEEECCC
Confidence            6322    12 3456778886 77777764

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=95.72  E-value=0.046  Score=44.41  Aligned_cols=98  Identities=17%  Similarity=0.130  Sum_probs=66.6

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      .+.++.+||-.|+|. |..+..+++. |. +|++++.+++..+.+++.+...+- ....+  +.+ +  ...+.+|+|+-
T Consensus        43 ~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~-~~~~d--~~~-~--~~~~~~D~v~~  113 (218)
T 3ou2_A           43 AGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVE-FRQQD--LFD-W--TPDRQWDAVFF  113 (218)
T ss_dssp             TTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEE-EEECC--TTS-C--CCSSCEEEEEE
T ss_pred             cCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeE-EEecc--ccc-C--CCCCceeEEEE
Confidence            467888999998864 7777778777 76 999999999999998886532211 00111  100 0  12337999985


Q ss_pred             ecCC--------HHHHHHHHHhhccCCeEEEEeccC
Q 047713          221 CTGS--------VQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       221 ~~g~--------~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      ....        ...+..+.+.|+++ |.++.....
T Consensus       114 ~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  148 (218)
T 3ou2_A          114 AHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVT  148 (218)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred             echhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence            4321        34577888899998 998887653

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.72  E-value=0.036  Score=48.54  Aligned_cols=78  Identities=24%  Similarity=0.321  Sum_probs=49.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC---------ChhhHH----HHHhcCCceeeCCCCCCchHHHHHHh
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL---------NPSRFN----EAKKFGVTEFVNPKDYDKPVQQVIAD  209 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~---------~~~~~~----~~~~lg~~~~~~~~~~~~~~~~~~~~  209 (329)
                      .|+++||+|+ |++|.+++..+...|+ +|+.++.         +.++.+    .++..+.....|..+.. +..+.+.+
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~-~~~~~~~~   85 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVE-AGEKLVKT   85 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGG-GHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHH-HHHHHHHH
Confidence            4789999986 9999999998888999 7887643         334332    23334444444444432 23333333


Q ss_pred             hh--cCCccEEEEecC
Q 047713          210 MT--NGGVDRSVECTG  223 (329)
Q Consensus       210 ~~--~~~~d~Vid~~g  223 (329)
                      +.  .+++|++|++.|
T Consensus        86 ~~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           86 ALDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHHTSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            22  237999999987

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=95.71  E-value=0.029  Score=47.68  Aligned_cols=79  Identities=20%  Similarity=0.255  Sum_probs=48.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.+ .+++++.+.    ++..+....   .|..+.+ +..+.+.+...  
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~  103 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPA-AVRRLFATAEEAF  103 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            4789999986 9999999998888899 66665 445544433    233443222   2333321 23333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|+++|.
T Consensus       104 g~iD~lvnnAG~  115 (267)
T 3u5t_A          104 GGVDVLVNNAGI  115 (267)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.71  E-value=0.037  Score=46.86  Aligned_cols=81  Identities=16%  Similarity=0.236  Sum_probs=51.4

Q ss_pred             CCCCCeEEEEc-C--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce--eeCCCCCCchHHHHHHhhhc
Q 047713          142 PKKGQSVAIFG-L--GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTE--FVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       142 ~~~g~~VlI~G-a--g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~--~~~~~~~~~~~~~~~~~~~~  212 (329)
                      ..++++|||+| +  +++|.+++..+...|+ +|+.++++++..+.++    +.+...  ..|..+. ++..+.+++...
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~   88 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADD-AQIDALFASLKT   88 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCH-HHHHHHHHHHHH
Confidence            35689999997 4  7999999998888999 8888877755444333    333222  2233322 123333333322


Q ss_pred             --CCccEEEEecCC
Q 047713          213 --GGVDRSVECTGS  224 (329)
Q Consensus       213 --~~~d~Vid~~g~  224 (329)
                        +++|++|+++|.
T Consensus        89 ~~g~id~lv~nAg~  102 (271)
T 3ek2_A           89 HWDSLDGLVHSIGF  102 (271)
T ss_dssp             HCSCEEEEEECCCC
T ss_pred             HcCCCCEEEECCcc
Confidence              379999999873

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.71  E-value=0.018  Score=48.63  Aligned_cols=74  Identities=19%  Similarity=0.195  Sum_probs=47.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhh--cCCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMT--NGGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~--~~~~d~Vi  219 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.     .. ...|..+. +++.+.+++..  .+++|++|
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~~Dl~d~-~~v~~~~~~~~~~~g~iD~lv   92 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----FLAVKCDITDT-EQVEQAYKEIEETHGPVEVLI   92 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----SEEEECCTTSH-HHHHHHHHHHHHHTCSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----ceEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            3689999986 9999999998888998 78888776554321     11 11233322 12333333332  23699999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      ++.|.
T Consensus        93 ~nAg~   97 (253)
T 2nm0_A           93 ANAGV   97 (253)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            98874

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.70  E-value=0.03  Score=48.76  Aligned_cols=104  Identities=15%  Similarity=0.202  Sum_probs=68.4

Q ss_pred             hhccC-CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh
Q 047713          137 VNVAK-PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       137 ~~~~~-~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      ..... ++++++||-.|+|. |..+..+++..+. +|++++.+++..+.+++    .|...-+.....+  +.+ + ...
T Consensus       109 ~~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~-~-~~~  182 (312)
T 3vc1_A          109 MDHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCN--MLD-T-PFD  182 (312)
T ss_dssp             HTTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC--TTS-C-CCC
T ss_pred             HHHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECC--hhc-C-CCC
Confidence            34445 78999999998864 7888888887777 89999999988877665    3432101000001  000 0 011


Q ss_pred             cCCccEEEEe-----cCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          212 NGGVDRSVEC-----TGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~~~~d~Vid~-----~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+.+|+|+..     .+....+..+.++|+++ |+++....
T Consensus       183 ~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  222 (312)
T 3vc1_A          183 KGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG  222 (312)
T ss_dssp             TTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            2479999753     22356788899999998 99988764

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.70  E-value=0.057  Score=49.90  Aligned_cols=93  Identities=11%  Similarity=0.049  Sum_probs=58.2

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHh-cCCce-eeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAKK-FGVTE-FVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~~-lg~~~-~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      +.+|+|+|+|.+|.+++..+... +. +|++++++.++.+.+.+ .+... .++..+    .. .+.++.. ++|+||++
T Consensus        23 ~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d----~~-~l~~~l~-~~DvVIn~   95 (467)
T 2axq_A           23 GKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTD----DS-ALDKVLA-DNDVVISL   95 (467)
T ss_dssp             CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTC----HH-HHHHHHH-TSSEEEEC
T ss_pred             CCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCC----HH-HHHHHHc-CCCEEEEC
Confidence            56899999999999999888776 66 78888888887665543 23322 223322    21 2222222 58999999


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEEe
Q 047713          222 TGSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      ++..........++..+ -.++..
T Consensus        96 tp~~~~~~v~~a~l~~g-~~vvd~  118 (467)
T 2axq_A           96 IPYTFHPNVVKSAIRTK-TDVVTS  118 (467)
T ss_dssp             SCGGGHHHHHHHHHHHT-CEEEEC
T ss_pred             CchhhhHHHHHHHHhcC-CEEEEe
Confidence            97542323344456664 555544

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.69  E-value=0.047  Score=46.50  Aligned_cols=79  Identities=22%  Similarity=0.274  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-----------HHHHHhcCCce---eeCCCCCCchHHHHHH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-----------FNEAKKFGVTE---FVNPKDYDKPVQQVIA  208 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-----------~~~~~~lg~~~---~~~~~~~~~~~~~~~~  208 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.++++.++           .+.++..+...   ..|..+. ++..+.++
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~   82 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREE-DQVRAAVA   82 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCH-HHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCH-HHHHHHHH
Confidence            4789999986 9999999998888999 78888776542           12223334322   2233332 12333333


Q ss_pred             hhhc--CCccEEEEecCC
Q 047713          209 DMTN--GGVDRSVECTGS  224 (329)
Q Consensus       209 ~~~~--~~~d~Vid~~g~  224 (329)
                      +...  +++|++|++.|.
T Consensus        83 ~~~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCc
Confidence            3322  379999999983

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=95.69  E-value=0.039  Score=46.32  Aligned_cols=72  Identities=17%  Similarity=0.246  Sum_probs=48.4

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc--CCccEEEEe
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN--GGVDRSVEC  221 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~d~Vid~  221 (329)
                      ++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.     ....++..+. ++..+.+.+...  +++|++|++
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~d~-~~v~~~~~~~~~~~g~iD~li~~   94 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDSGE-EEIKSVIEKINSKSIKVDTFVCA   94 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCSSH-HHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeCCH-HHHHHHHHHHHHHcCCCCEEEEC
Confidence            689999986 9999999999988999 78888887654321     1112222221 224444444433  379999999


Q ss_pred             cC
Q 047713          222 TG  223 (329)
Q Consensus       222 ~g  223 (329)
                      +|
T Consensus        95 Ag   96 (251)
T 3orf_A           95 AG   96 (251)
T ss_dssp             CC
T ss_pred             Cc
Confidence            88

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.68  E-value=0.023  Score=47.94  Aligned_cols=77  Identities=18%  Similarity=0.312  Sum_probs=47.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce---eeCCCCCCchHHHHHHhhh-cCCccEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE---FVNPKDYDKPVQQVIADMT-NGGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~-~~~~d~V  218 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.++++.+  +..++++...   ..|..+.+ +..+.+.... .+++|++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGE--DVVADLGDRARFAAADVTDEA-AVASALDLAETMGTLRIV   83 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCH--HHHHHTCTTEEEEECCTTCHH-HHHHHHHHHHHHSCEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchH--HHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHhCCCCEE
Confidence            3789999986 9999999998888899 7888877443  3344455422   22333221 2222222211 2479999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      +++.|.
T Consensus        84 v~nAg~   89 (257)
T 3tl3_A           84 VNCAGT   89 (257)
T ss_dssp             EECGGG
T ss_pred             EECCCC
Confidence            999983

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.67  E-value=0.025  Score=46.43  Aligned_cols=95  Identities=15%  Similarity=0.228  Sum_probs=57.1

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .+|||+|+ |.+|..+++.+...|. +|+++++++++.+.+. -+...+ .|..+    . +.+.++.. ++|+||.++|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d----~-~~~~~~~~-~~d~vi~~a~   76 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EHLKVKKADVSS----L-DEVCEVCK-GADAVISAFN   76 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TTEEEECCCTTC----H-HHHHHHHT-TCSEEEECCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-CceEEEEecCCC----H-HHHHHHhc-CCCEEEEeCc
Confidence            57999987 9999999999998898 8999998877643211 111111 12221    1 22333332 5899999987


Q ss_pred             CHH-----------HHHHHHHhhccC-CeEEEEeccC
Q 047713          224 SVQ-----------AMISAFECVHDG-WGVAVLVGVP  248 (329)
Q Consensus       224 ~~~-----------~~~~~~~~l~~~-~G~vv~~g~~  248 (329)
                      ...           .....++.+... -.+++.++..
T Consensus        77 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           77 PGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             C------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence            531           122344444433 1478888753

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.66  E-value=0.042  Score=47.29  Aligned_cols=79  Identities=16%  Similarity=0.218  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCC--CEEEEEcCChhhHHHHH-hc-----CCce---eeCCCCCCchHHHHHHhhh
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGA--SRIIGVDLNPSRFNEAK-KF-----GVTE---FVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~--~~vv~~~~~~~~~~~~~-~l-----g~~~---~~~~~~~~~~~~~~~~~~~  211 (329)
                      .|+++||+|+ +++|.+++..+...|+  .+|+.+++++++.+.+. ++     +...   ..|..+. +++.+.+++..
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~  110 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQA-EKIKPFIENLP  110 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCG-GGHHHHHHTSC
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCH-HHHHHHHHHHH
Confidence            3789999986 9999998886665554  27888888887765432 22     3221   2233332 23555555543


Q ss_pred             c--CCccEEEEecC
Q 047713          212 N--GGVDRSVECTG  223 (329)
Q Consensus       212 ~--~~~d~Vid~~g  223 (329)
                      .  +++|++|+++|
T Consensus       111 ~~~g~iD~lVnnAG  124 (287)
T 3rku_A          111 QEFKDIDILVNNAG  124 (287)
T ss_dssp             GGGCSCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            3  37999999988

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.65  E-value=0.046  Score=46.13  Aligned_cols=78  Identities=10%  Similarity=0.107  Sum_probs=48.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHHHhc----CCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNEAKKF----GVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~~~~l----g~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+.+ +++..+.+++.    +...   ..|..+. +++.+.++++..  
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK-EDLHKIVEEAMSHF   83 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHh
Confidence            3578999986 9999999998888999 6777644 44444444332    2211   1233322 123333443322  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|+++|
T Consensus        84 g~id~lv~~Ag   94 (264)
T 3i4f_A           84 GKIDFLINNAG   94 (264)
T ss_dssp             SCCCEEECCCC
T ss_pred             CCCCEEEECCc
Confidence            37999999998

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.64  E-value=0.008  Score=49.78  Aligned_cols=103  Identities=21%  Similarity=0.228  Sum_probs=67.7

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhh-cC
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMT-NG  213 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~-~~  213 (329)
                      +.....+.++.+||-.|+|. |..+..+++.. . +|++++.+++..+.+++..... -+.....+  ..+   ... .+
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d--~~~---~~~~~~  133 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGD--GTL---GYEEEK  133 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESC--GGG---CCGGGC
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEECC--ccc---ccccCC
Confidence            34556778899999999875 88888888874 4 9999999999888877642110 00000111  111   111 24


Q ss_pred             CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          214 GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       214 ~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+|+|+.........+.+.+.|+++ |+++....
T Consensus       134 ~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~~  166 (231)
T 1vbf_A          134 PYDRVVVWATAPTLLCKPYEQLKEG-GIMILPIG  166 (231)
T ss_dssp             CEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             CccEEEECCcHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            7999986654444456778899998 98887754

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=95.64  E-value=0.039  Score=50.91  Aligned_cols=92  Identities=24%  Similarity=0.362  Sum_probs=66.4

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      -.|.+|.|+|.|.+|..+++.++.+|+ +|++++.+..+...+...|... .     +  +.+.+     ...|+|+-+.
T Consensus       255 l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~~-~-----~--l~ell-----~~aDiVi~~~  320 (479)
T 1v8b_A          255 ISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFNV-V-----T--LDEIV-----DKGDFFITCT  320 (479)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCEE-C-----C--HHHHT-----TTCSEEEECC
T ss_pred             cCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCEe-c-----C--HHHHH-----hcCCEEEECC
Confidence            468999999999999999999999999 8999999887764455556521 1     1  32222     2479998887


Q ss_pred             CCHHHH-HHHHHhhccCCeEEEEeccCC
Q 047713          223 GSVQAM-ISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       223 g~~~~~-~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +....+ ...++.++++ ..++.++...
T Consensus       321 ~t~~lI~~~~l~~MK~g-ailiNvgrg~  347 (479)
T 1v8b_A          321 GNVDVIKLEHLLKMKNN-AVVGNIGHFD  347 (479)
T ss_dssp             SSSSSBCHHHHTTCCTT-CEEEECSSTT
T ss_pred             ChhhhcCHHHHhhcCCC-cEEEEeCCCC
Confidence            554434 3556778887 8888887643

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.62  E-value=0.037  Score=46.04  Aligned_cols=77  Identities=19%  Similarity=0.211  Sum_probs=48.5

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HhcCCce----eeCCCCCCchHHHHHHhhhc--
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFNEA----KKFGVTE----FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~~~----~~lg~~~----~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      ++++||+|+ |.+|.++++.+...|+ +|+.+ .+++++.+.+    ++.+...    ..|..+. ++..+.+.+...  
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEA-EAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCH-HHHHHHHHHHHHhc
Confidence            357899986 9999999998888998 77777 7777665432    2234321    1233322 123333333221  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|++.|
T Consensus        79 ~~~d~li~~Ag   89 (245)
T 2ph3_A           79 GGLDTLVNNAG   89 (245)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.57  E-value=0.029  Score=48.21  Aligned_cols=80  Identities=15%  Similarity=0.138  Sum_probs=49.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHH-H----hcCCce---eeCCCCC---CchHHHHHHhh
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP-SRFNEA-K----KFGVTE---FVNPKDY---DKPVQQVIADM  210 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~-~~~~~~-~----~lg~~~---~~~~~~~---~~~~~~~~~~~  210 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++ ++.+.+ +    +.+...   ..|..+.   ..++.+.+.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            3688999986 9999999998888899 788887776 554322 2    233321   2233331   11233333332


Q ss_pred             hc--CCccEEEEecCC
Q 047713          211 TN--GGVDRSVECTGS  224 (329)
Q Consensus       211 ~~--~~~d~Vid~~g~  224 (329)
                      ..  +++|++|+++|.
T Consensus       101 ~~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence            22  379999999873

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.56  E-value=0.01  Score=49.65  Aligned_cols=74  Identities=16%  Similarity=0.265  Sum_probs=46.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHH-----Hhhhc--CCc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVI-----ADMTN--GGV  215 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~-----~~~~~--~~~  215 (329)
                      .++++||+|+ |++|.++++.+.. |. .|+.+++++++.+.+.++.....+..   +  +.+..     .+...  +++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~---D--~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES---D--IVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC---C--HHHHHHTSSSCGGGTTCSCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec---c--cchHHHHHHHHHHHHhcCCC
Confidence            3689999986 9999998887755 77 89999898888777665432222111   1  22211     11111  269


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |++|++.|.
T Consensus        77 d~lv~~Ag~   85 (245)
T 3e9n_A           77 DTLVHAAAV   85 (245)
T ss_dssp             SEEEECC--
T ss_pred             CEEEECCCc
Confidence            999999874

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.55  E-value=0.06  Score=45.53  Aligned_cols=79  Identities=16%  Similarity=0.247  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHHHH-hcCCcee--eCCCCCCchHHHHHHhhhcC-
Q 047713          144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNP---SRFNEAK-KFGVTEF--VNPKDYDKPVQQVIADMTNG-  213 (329)
Q Consensus       144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~---~~~~~~~-~lg~~~~--~~~~~~~~~~~~~~~~~~~~-  213 (329)
                      .++++||+|+   |.+|.+++..+...|+ +|+.+++++   +..+.+. +.+....  .|..+. +++.+.+++.... 
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAED-ASIDTMFAELGKVW   85 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCH-HHHHHHHHHHHHHc
Confidence            4788999974   6999999998888999 788887766   2223222 2332222  233332 1233444443333 


Q ss_pred             -CccEEEEecCC
Q 047713          214 -GVDRSVECTGS  224 (329)
Q Consensus       214 -~~d~Vid~~g~  224 (329)
                       ++|++|++.|.
T Consensus        86 g~iD~lv~~Ag~   97 (265)
T 1qsg_A           86 PKFDGFVHSIGF   97 (265)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence             79999999873

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.54  E-value=0.034  Score=46.80  Aligned_cols=78  Identities=15%  Similarity=0.271  Sum_probs=49.6

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcC--CCEEEEEcCChhhHHHH-HhcCCce---eeCCCCCCchHHHHHHhhhc--CCc
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSG--ASRIIGVDLNPSRFNEA-KKFGVTE---FVNPKDYDKPVQQVIADMTN--GGV  215 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G--~~~vv~~~~~~~~~~~~-~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~  215 (329)
                      |+++||+|+ +++|.+++..+...|  + +|+.+++++++.+.+ ++++...   ..|..+.+ +..+.+.+...  +++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDS-VLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHH-HHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCCHH-HHHHHHHHHHHhcCCc
Confidence            578999986 999999988666554  5 788888888776654 3344322   12333321 23333333322  379


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |+++++.|.
T Consensus        80 d~lvnnAg~   88 (254)
T 3kzv_A           80 DSLVANAGV   88 (254)
T ss_dssp             CEEEEECCC
T ss_pred             cEEEECCcc
Confidence            999999884

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.52  E-value=0.043  Score=49.72  Aligned_cols=85  Identities=24%  Similarity=0.192  Sum_probs=52.8

Q ss_pred             ccCC-CCCCeEEEEcC-CHHHHHHHHHHHH-cCCCEEEEEcCChhh----------------HHHHHhcCCcee---eCC
Q 047713          139 VAKP-KKGQSVAIFGL-GAVGLAAAEGARV-SGASRIIGVDLNPSR----------------FNEAKKFGVTEF---VNP  196 (329)
Q Consensus       139 ~~~~-~~g~~VlI~Ga-g~iG~aai~la~~-~G~~~vv~~~~~~~~----------------~~~~~~lg~~~~---~~~  196 (329)
                      ..++ +.++++||+|+ +++|++++..+.. .|+ +|+.++.+.+.                .+.+++.|....   .|.
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv  132 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA  132 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC
Confidence            3455 35788899986 9999999987777 899 78877665432                144566665332   233


Q ss_pred             CCCC--chHHHHHHhhhcCCccEEEEecCC
Q 047713          197 KDYD--KPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       197 ~~~~--~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      .+.+  ..+.+.+.+..+|++|++++++|.
T Consensus       133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            3221  112233333332679999998875

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.52  E-value=0.041  Score=46.95  Aligned_cols=104  Identities=12%  Similarity=0.105  Sum_probs=66.7

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhc-----CCceeeCCCCCCchHHHHHHh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAKKF-----GVTEFVNPKDYDKPVQQVIAD  209 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~~l-----g~~~~~~~~~~~~~~~~~~~~  209 (329)
                      +.....++++++||-.|+| .|..++.+++.. ...+|++++.+++..+.+++.     |...+- ....+  +.+   .
T Consensus       102 ~~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~-~~~~d--~~~---~  174 (275)
T 1yb2_A          102 IIMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVR-TSRSD--IAD---F  174 (275)
T ss_dssp             ----CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEE-EECSC--TTT---C
T ss_pred             HHHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEE-EEECc--hhc---c
Confidence            3455678899999999887 477788888863 223999999999888776653     432111 11111  111   1


Q ss_pred             hhcCCccEEEEecCCH-HHHHHHHHhhccCCeEEEEecc
Q 047713          210 MTNGGVDRSVECTGSV-QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       210 ~~~~~~d~Vid~~g~~-~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ...+.+|+|+-....+ ..++.+.+.|+++ |.++....
T Consensus       175 ~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  212 (275)
T 1yb2_A          175 ISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  212 (275)
T ss_dssp             CCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             CcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            1123799998655432 5678888999998 99887754

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.52  E-value=0.13  Score=44.90  Aligned_cols=91  Identities=23%  Similarity=0.260  Sum_probs=60.8

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGAS-RIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~-~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .+|.|+|.|.+|...++.++..|.. .|++.++++++.+.++++|.. ......          .+..-...|+||.++.
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~----------~~~~~~~aDvVilavp  103 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI----------AKVEDFSPDFVMLSSP  103 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCT----------TGGGGGCCSEEEECSC
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCH----------HHHhhccCCEEEEeCC
Confidence            5799999999999999988888863 799999999999998888863 222110          1100124799999886


Q ss_pred             CHH---HHHHHHHhhccCCeEEEEecc
Q 047713          224 SVQ---AMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       224 ~~~---~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ...   .+......++++ ..++.++.
T Consensus       104 ~~~~~~vl~~l~~~l~~~-~iv~d~~S  129 (314)
T 3ggo_A          104 VRTFREIAKKLSYILSED-ATVTDQGS  129 (314)
T ss_dssp             GGGHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             HHHHHHHHHHHhhccCCC-cEEEECCC
Confidence            432   233333445565 56665543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.49  E-value=0.075  Score=44.12  Aligned_cols=72  Identities=17%  Similarity=0.102  Sum_probs=47.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVS--GASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~--G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      .+.+|||+|+ |.+|..+++.+...  |. +|+++++++++.+.+ .-+...+ .|..+    . +.+.++.. ++|+||
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~d----~-~~~~~~~~-~~d~vi   74 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDITD----A-DSINPAFQ-GIDALV   74 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTTS----H-HHHHHHHT-TCSEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCCC----H-HHHHHHHc-CCCEEE
Confidence            4678999986 99999999988887  77 899988887665433 1122221 22222    1 22333332 589999


Q ss_pred             EecC
Q 047713          220 ECTG  223 (329)
Q Consensus       220 d~~g  223 (329)
                      +++|
T Consensus        75 ~~a~   78 (253)
T 1xq6_A           75 ILTS   78 (253)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            9887

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.49  E-value=0.035  Score=46.81  Aligned_cols=79  Identities=18%  Similarity=0.288  Sum_probs=48.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHh----cCCce---eeCCCCCCchHHHHHHhhh--c
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRF-NEAKK----FGVTE---FVNPKDYDKPVQQVIADMT--N  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~-~~~~~----lg~~~---~~~~~~~~~~~~~~~~~~~--~  212 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.++++.++. +.+++    .+...   ..|..+. +++.+.+++..  .
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT-DIVTKTIQQIDADL   90 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCH-HHHHHHHHHHHHhc
Confidence            3678999986 9999999998888898 788887754332 22222    24321   1233322 12333344332  2


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +.+|++|++.|.
T Consensus        91 ~~id~li~~Ag~  102 (265)
T 1h5q_A           91 GPISGLIANAGV  102 (265)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            369999999873

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.49  E-value=0.035  Score=46.27  Aligned_cols=79  Identities=22%  Similarity=0.257  Sum_probs=47.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +++++||+|+ |.+|.+++..+...|+ +|+.+ .+++++.+.    +++.+...   ..|..+. +++.+.+++...  
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNP-EDVENMVKTAMDAF   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHhc
Confidence            3678999986 9999999999888998 78777 555444332    23334322   1233322 123333333222  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus        82 ~~~d~vi~~Ag~   93 (247)
T 2hq1_A           82 GRIDILVNNAGI   93 (247)
T ss_dssp             SCCCEEEECC--
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.48  E-value=0.037  Score=47.03  Aligned_cols=79  Identities=16%  Similarity=0.153  Sum_probs=49.4

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HhcCCcee---eCCCCCCchHHHHHHhhhc-
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFNEA----KKFGVTEF---VNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .+++++||+|+ |++|.+++..+...|+ +|+.+ .++.++.+.+    ++.+....   .|..+. ++..+.+++... 
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  101 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNA-ADIAAMFSAVDRQ  101 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHh
Confidence            34789999986 9999999999999999 66554 6666655432    33343221   233222 123333333322 


Q ss_pred             -CCccEEEEecC
Q 047713          213 -GGVDRSVECTG  223 (329)
Q Consensus       213 -~~~d~Vid~~g  223 (329)
                       +++|++|+++|
T Consensus       102 ~g~id~li~nAg  113 (272)
T 4e3z_A          102 FGRLDGLVNNAG  113 (272)
T ss_dssp             HSCCCEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence             37999999887

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.44  E-value=0.022  Score=48.61  Aligned_cols=78  Identities=29%  Similarity=0.377  Sum_probs=49.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+. +++.+.+.+...  +
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDP-KSVEETISQQEKDFG  110 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCH-HHHHHHHHHHHHHhC
Confidence            3789999986 9999999998888898 788888776544332    2334321   1233321 123333333221  3


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      .+|++|++.|
T Consensus       111 ~id~li~~Ag  120 (279)
T 3ctm_A          111 TIDVFVANAG  120 (279)
T ss_dssp             CCSEEEECGG
T ss_pred             CCCEEEECCc
Confidence            6999999887

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.44  E-value=0.037  Score=46.05  Aligned_cols=77  Identities=17%  Similarity=0.211  Sum_probs=48.4

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhh--cC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIG-VDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMT--NG  213 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~-~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~--~~  213 (329)
                      |+++||+|+ |.+|.++++.+...|+ +|+. ..+++++.+.+    ++.+...   ..|..+. +++.+.+.+..  .+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE-ADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSH-HHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCH-HHHHHHHHHHHHHcC
Confidence            468999986 9999999999988999 6777 47776655432    2234321   1233321 12333333332  23


Q ss_pred             CccEEEEecC
Q 047713          214 GVDRSVECTG  223 (329)
Q Consensus       214 ~~d~Vid~~g  223 (329)
                      ++|++|++.|
T Consensus        79 ~id~li~~Ag   88 (244)
T 1edo_A           79 TIDVVVNNAG   88 (244)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.44  E-value=0.04  Score=47.89  Aligned_cols=102  Identities=16%  Similarity=0.084  Sum_probs=65.2

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-------ceeeCCCCCCchHHHHHHhhhcCC
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV-------TEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~-------~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-.       ..-+.....+  ..+.+.+...+.
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D--~~~~~~~~~~~~  169 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGD--GLAFVRQTPDNT  169 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC--HHHHHHSSCTTC
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECc--HHHHHHhccCCc
Confidence            35678999998763 6677777776555599999999998888776320       0001111112  444333322348


Q ss_pred             ccEEEEecCC----------HHHHHHHHHhhccCCeEEEEecc
Q 047713          215 VDRSVECTGS----------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       215 ~d~Vid~~g~----------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|+|+-....          .+.+..+.+.|+++ |.++....
T Consensus       170 fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~~  211 (304)
T 3bwc_A          170 YDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQGE  211 (304)
T ss_dssp             EEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             eeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            9998743311          35678888999998 99887643

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.43  E-value=0.056  Score=45.64  Aligned_cols=79  Identities=16%  Similarity=0.285  Sum_probs=48.9

Q ss_pred             CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHHH-HhcCCcee--eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNPS---RFNEA-KKFGVTEF--VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~~---~~~~~-~~lg~~~~--~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+   |.+|.+++..+...|+ +|+.++++++   ..+.+ ++.+....  .|..+. +++.+.+++...  
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQD-EELDALFAGVKEAF   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            3789999974   6999999998888898 7888887765   22222 22342222  233322 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus        85 g~iD~lv~~Ag~   96 (261)
T 2wyu_A           85 GGLDYLVHAIAF   96 (261)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.43  E-value=0.056  Score=46.28  Aligned_cols=79  Identities=18%  Similarity=0.251  Sum_probs=48.9

Q ss_pred             CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHHHH-hcCCcee--eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNPS---RFNEAK-KFGVTEF--VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~~---~~~~~~-~lg~~~~--~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .|+++||+|+   |++|.+++..+...|+ +|+.++++++   ..+.++ +.+....  .|..+. +++.+.+.+...  
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLD-EDIKNLKKFLEENW   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4789999974   6999999998888898 7888887764   222222 2332111  233322 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus        98 g~iD~lv~~Ag~  109 (285)
T 2p91_A           98 GSLDIIVHSIAY  109 (285)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=95.42  E-value=0.0091  Score=49.41  Aligned_cols=98  Identities=15%  Similarity=0.154  Sum_probs=65.6

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCC------CEEEEEcCChhhHHHHHhc----C-----CceeeCCCCCCchHHH
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGA------SRIIGVDLNPSRFNEAKKF----G-----VTEFVNPKDYDKPVQQ  205 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~------~~vv~~~~~~~~~~~~~~l----g-----~~~~~~~~~~~~~~~~  205 (329)
                      .++++++||..|+|. |..+..+++..+.      .+|++++.+++..+.+++.    +     ...+- ....+  ...
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~-~~~~d--~~~  156 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLL-IVEGD--GRK  156 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEE-EEESC--GGG
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceE-EEECC--ccc
Confidence            478899999999875 8888888886652      3899999999887776542    1     11110 00111  111


Q ss_pred             HHHhhhc-CCccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          206 VIADMTN-GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       206 ~~~~~~~-~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                         .... +.+|+|+.........+...+.|+++ |+++..-
T Consensus       157 ---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  194 (227)
T 1r18_A          157 ---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPV  194 (227)
T ss_dssp             ---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             ---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEEE
Confidence               1122 47999987766555667888999998 9887764

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.42  E-value=0.054  Score=45.90  Aligned_cols=97  Identities=20%  Similarity=0.253  Sum_probs=63.4

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHc---CCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcCC
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVS---GASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~---G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      +++|.+||-+|+| .|..+..+++..   |+ +|++++.+++..+.+++    .+...-+.....+      +.++..+.
T Consensus        68 ~~~~~~vLDlGcG-tG~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D------~~~~~~~~  139 (261)
T 4gek_A           68 VQPGTQVYDLGCS-LGAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGD------IRDIAIEN  139 (261)
T ss_dssp             CCTTCEEEEETCT-TTHHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC------TTTCCCCS
T ss_pred             CCCCCEEEEEeCC-CCHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeecc------cccccccc
Confidence            6899999999986 377888888864   55 89999999998877765    2322111111111      12222236


Q ss_pred             ccEEEEecCC--------HHHHHHHHHhhccCCeEEEEecc
Q 047713          215 VDRSVECTGS--------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       215 ~d~Vid~~g~--------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|+|+-...-        ...+....+.|+|+ |.++....
T Consensus       140 ~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG-G~lii~e~  179 (261)
T 4gek_A          140 ASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEK  179 (261)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccceeeeeeeecCchhHhHHHHHHHHHcCCC-cEEEEEec
Confidence            8888754321        13577888899998 99887654

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.40  E-value=0.012  Score=49.87  Aligned_cols=76  Identities=13%  Similarity=0.193  Sum_probs=47.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTN--GGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~--~~~d~Vi  219 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.++++.++.+.   ..... ..|..+. ++..+.+.+...  +++|++|
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~---~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSAD---PDIHTVAGDISKP-ETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSS---TTEEEEESCTTSH-HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccc---CceEEEEccCCCH-HHHHHHHHHHHHHCCCCCEEE
Confidence            3689999986 9999999999888999 88888876543211   11111 1233222 123333333322  3799999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      +++|.
T Consensus       102 ~nAg~  106 (260)
T 3un1_A          102 NNAGV  106 (260)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99873

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.39  E-value=0.038  Score=47.42  Aligned_cols=69  Identities=12%  Similarity=0.139  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC---ceeeCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV---TEFVNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~---~~~~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      .+++++|+|+|++|.+++..+...|+++|+.+.++.++.+. +++++.   ......           .++. ..+|+||
T Consensus       125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~-----------~~l~-~~aDiII  192 (281)
T 3o8q_A          125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAF-----------EQLK-QSYDVII  192 (281)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEG-----------GGCC-SCEEEEE
T ss_pred             cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeH-----------HHhc-CCCCEEE
Confidence            58899999999999999998888997788888888877554 444542   112211           1111 3689999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      ++++.
T Consensus       193 naTp~  197 (281)
T 3o8q_A          193 NSTSA  197 (281)
T ss_dssp             ECSCC
T ss_pred             EcCcC
Confidence            99864

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.39  E-value=0.048  Score=47.61  Aligned_cols=99  Identities=14%  Similarity=0.113  Sum_probs=63.2

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-------eeeCCCCCCchHHHHHHhhhcCCc
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-------EFVNPKDYDKPVQQVIADMTNGGV  215 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-------~~~~~~~~~~~~~~~~~~~~~~~~  215 (329)
                      .++.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-..       .-+.....+  ..+.+.. ..+.+
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D--~~~~l~~-~~~~f  182 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGD--GFEFLKN-HKNEF  182 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSC--HHHHHHH-CTTCE
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEECh--HHHHHHh-cCCCc
Confidence            3568999998763 67777787766555999999999998888764211       001111122  4444433 23479


Q ss_pred             cEEEEecCC----------HHHHHHHHHhhccCCeEEEEec
Q 047713          216 DRSVECTGS----------VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       216 d~Vid~~g~----------~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+|+-....          ...++.+.+.|+++ |.++.-.
T Consensus       183 D~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~  222 (314)
T 2b2c_A          183 DVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  222 (314)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             eEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence            998733211          35677888899998 9888764

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.38  E-value=0.06  Score=47.72  Aligned_cols=89  Identities=15%  Similarity=0.150  Sum_probs=58.3

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++....+.++++|...+-     +  +.+.++     ..|+|+-++.
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~-----~--l~ell~-----~aDvV~l~~P  229 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFVE-----D--LNEMLP-----KCDVIVINMP  229 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEECS-----C--HHHHGG-----GCSEEEECSC
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEcC-----C--HHHHHh-----cCCEEEECCC
Confidence            58899999999999999999999999 899998876666666667754321     1  222222     2567666654


Q ss_pred             CH-H---HH-HHHHHhhccCCeEEEEec
Q 047713          224 SV-Q---AM-ISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       224 ~~-~---~~-~~~~~~l~~~~G~vv~~g  246 (329)
                      .. +   .+ ...+..++++ ..++.++
T Consensus       230 lt~~t~~li~~~~l~~mk~g-ailIN~a  256 (351)
T 3jtm_A          230 LTEKTRGMFNKELIGKLKKG-VLIVNNA  256 (351)
T ss_dssp             CCTTTTTCBSHHHHHHSCTT-EEEEECS
T ss_pred             CCHHHHHhhcHHHHhcCCCC-CEEEECc
Confidence            21 1   11 3445556665 5555554

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.38  E-value=0.13  Score=42.04  Aligned_cols=75  Identities=15%  Similarity=0.073  Sum_probs=53.3

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      +|+|.|+|.+|..+++.+...|. .|++++.++++.+.+. +++...+.-. ..+   ...+++..-.++|+|+-+++..
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~i~gd-~~~---~~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATIIHGD-GSH---KEILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEEEESC-TTS---HHHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeEEEcC-CCC---HHHHHhcCcccCCEEEEecCCc
Confidence            47889999999999999998998 7999999999887754 4565433311 111   2234444333799999999765


Q ss_pred             H
Q 047713          226 Q  226 (329)
Q Consensus       226 ~  226 (329)
                      .
T Consensus        77 ~   77 (218)
T 3l4b_C           77 E   77 (218)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.37  E-value=0.078  Score=45.18  Aligned_cols=91  Identities=20%  Similarity=0.183  Sum_probs=59.1

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      +..+.+++|+|+|+++.+++..+...|+++|+.+.++.++.+ ++++++.. ...  +    .    .   ...+|+||+
T Consensus       116 ~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~~~--~----~----~---~~~~DivIn  181 (271)
T 1npy_A          116 LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YIN--S----L----E---NQQADILVN  181 (271)
T ss_dssp             CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EES--C----C----T---TCCCSEEEE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-cch--h----h----h---cccCCEEEE
Confidence            345789999999999999999888899878888888877754 45666642 110  0    0    0   125899999


Q ss_pred             ecCCHHH-------HHHHHHhhccCCeEEEEecc
Q 047713          221 CTGSVQA-------MISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       221 ~~g~~~~-------~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ++...-.       .......+.++ ..++.+..
T Consensus       182 aTp~gm~~~~~~~~~~~~~~~l~~~-~~v~DlvY  214 (271)
T 1npy_A          182 VTSIGMKGGKEEMDLAFPKAFIDNA-SVAFDVVA  214 (271)
T ss_dssp             CSSTTCTTSTTTTSCSSCHHHHHHC-SEEEECCC
T ss_pred             CCCCCccCccccCCCCCCHHHcCCC-CEEEEeec
Confidence            9864311       11112345555 56666643

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.37  E-value=0.036  Score=49.45  Aligned_cols=91  Identities=14%  Similarity=0.204  Sum_probs=59.1

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .|.+|.|+|.|.+|...++.++.+|.++|++.+++..+.+...++|+..+   .  +  +.+.++     ..|+|+.++.
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~---~--~--l~ell~-----~aDvV~l~~P  230 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV---E--N--IEELVA-----QADIVTVNAP  230 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC---S--S--HHHHHH-----TCSEEEECCC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec---C--C--HHHHHh-----cCCEEEECCC
Confidence            68899999999999999999999998338999877766666666775421   0  1  322222     2577776665


Q ss_pred             CHH----HH-HHHHHhhccCCeEEEEecc
Q 047713          224 SVQ----AM-ISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       224 ~~~----~~-~~~~~~l~~~~G~vv~~g~  247 (329)
                      ..+    .+ ...+..++++ +.++.++.
T Consensus       231 ~t~~t~~li~~~~l~~mk~g-a~lIn~ar  258 (364)
T 2j6i_A          231 LHAGTKGLINKELLSKFKKG-AWLVNTAR  258 (364)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence            321    12 2344556665 66666553

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.37  E-value=0.055  Score=47.31  Aligned_cols=75  Identities=15%  Similarity=0.151  Sum_probs=49.4

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-----C--Ccee--eCCCCCCchHHHHHHhhhc
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-----G--VTEF--VNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-----g--~~~~--~~~~~~~~~~~~~~~~~~~  212 (329)
                      .++.+|||+|+ |.+|..++..+...|. +|++++++.++.+.+.+.     +  ...+  .|..+.+     .+.++. 
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~~~-   81 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQG-----AYDEVI-   81 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTT-----TTTTTT-
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChH-----HHHHHH-
Confidence            45789999987 9999999998888898 899888887765543321     2  2222  2333221     122222 


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      .++|+||++++.
T Consensus        82 ~~~d~vih~A~~   93 (342)
T 1y1p_A           82 KGAAGVAHIASV   93 (342)
T ss_dssp             TTCSEEEECCCC
T ss_pred             cCCCEEEEeCCC
Confidence            268999999873

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.37  E-value=0.054  Score=47.84  Aligned_cols=75  Identities=19%  Similarity=0.247  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHH-hcC---Cce-eeCCCCCCchHHHHHHhhhcCCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAK-KFG---VTE-FVNPKDYDKPVQQVIADMTNGGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~-~lg---~~~-~~~~~~~~~~~~~~~~~~~~~~~d  216 (329)
                      .+.+|||+|+ |.+|..++..+... |..+|+++++++.+.+.+. ++.   ... ..|..+    . +.+.++.. ++|
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d----~-~~l~~~~~-~~D   93 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD----L-ERLNYALE-GVD   93 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC----H-HHHHHHTT-TCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC----H-HHHHHHHh-cCC
Confidence            4789999986 99999999988777 8657888888887765443 332   111 123322    1 23333332 699


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      +||.++|.
T Consensus        94 ~Vih~Aa~  101 (344)
T 2gn4_A           94 ICIHAAAL  101 (344)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.36  E-value=0.22  Score=43.69  Aligned_cols=73  Identities=19%  Similarity=0.241  Sum_probs=47.2

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh----hhHHHHHhc-------CCcee-eCCCCCCchHHHHHHhhh
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP----SRFNEAKKF-------GVTEF-VNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~----~~~~~~~~l-------g~~~~-~~~~~~~~~~~~~~~~~~  211 (329)
                      +.+|||+|+ |.+|..++..+...|. .|++++++.    +..+.++.+       +...+ .|..+    . +.+.++.
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~-~~~~~~~   98 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRD----L-TTCEQVM   98 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTC----H-HHHHHHT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCC----H-HHHHHHh
Confidence            579999987 9999999999988898 888888743    333333332       22211 12222    1 2333333


Q ss_pred             cCCccEEEEecCC
Q 047713          212 NGGVDRSVECTGS  224 (329)
Q Consensus       212 ~~~~d~Vid~~g~  224 (329)
                      . ++|+||++++.
T Consensus        99 ~-~~d~Vih~A~~  110 (351)
T 3ruf_A           99 K-GVDHVLHQAAL  110 (351)
T ss_dssp             T-TCSEEEECCCC
T ss_pred             c-CCCEEEECCcc
Confidence            2 69999999874

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.36  E-value=0.047  Score=45.64  Aligned_cols=79  Identities=22%  Similarity=0.257  Sum_probs=48.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNE----AKKFGVTEF---VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+ |++|.+++..+...|+ +|+.+.. ++++.+.    +++.+....   .|..+. ++..+.+++...  
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA-DEVKAMIKEVVSQF   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHc
Confidence            3678999986 9999999999989999 6766655 4444432    333443322   233222 123333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|+++++.|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 3osu_A           81 GSLDVLVNNAGI   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999883

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.35  E-value=0.059  Score=46.38  Aligned_cols=35  Identities=31%  Similarity=0.450  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      ..+|+|.|+|++|..+++.+...|..++..++.+.
T Consensus        36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            57999999999999999999889998999988765

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.34  E-value=0.051  Score=46.04  Aligned_cols=101  Identities=15%  Similarity=0.147  Sum_probs=64.4

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee--CCCCCCchHHHHHHhhhcC
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV--NPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~--~~~~~~~~~~~~~~~~~~~  213 (329)
                      +.....+.++.+||-.|+| .|..++.+++. |. +|++++.+++..+.+++.-....+  +..+.+  .  .......+
T Consensus        37 il~~l~l~~g~~VLDlGcG-tG~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~--~--~~~~~~~~  109 (261)
T 3iv6_A           37 DIFLENIVPGSTVAVIGAS-TRFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDIT--A--EIPKELAG  109 (261)
T ss_dssp             HHHTTTCCTTCEEEEECTT-CHHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTT--S--CCCGGGTT
T ss_pred             HHHhcCCCCcCEEEEEeCc-chHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeecc--c--ccccccCC
Confidence            3456678899999999987 48888888875 66 899999999999988764322211  111111  0  00011124


Q ss_pred             CccEEEEecCC--------HHHHHHHHHhhccCCeEEEEe
Q 047713          214 GVDRSVECTGS--------VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       214 ~~d~Vid~~g~--------~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      .+|+|+-....        ...+....++| ++ |+++..
T Consensus       110 ~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG-G~l~lS  147 (261)
T 3iv6_A          110 HFDFVLNDRLINRFTTEEARRACLGMLSLV-GS-GTVRAS  147 (261)
T ss_dssp             CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT-SEEEEE
T ss_pred             CccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC-cEEEEE
Confidence            79999864321        12456666678 98 988755

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.34  E-value=0.048  Score=44.80  Aligned_cols=99  Identities=16%  Similarity=0.114  Sum_probs=65.6

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhc----C-----CceeeCCCCCCchHHHHHHhhh
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKF----G-----VTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~l----g-----~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      ++++++||-.|+|. |..+..+++..|. .+|++++.+++..+.+++.    +     ...+- ....+  ....  ...
T Consensus        75 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~-~~~~d--~~~~--~~~  148 (226)
T 1i1n_A           75 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQ-LVVGD--GRMG--YAE  148 (226)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEE-EEESC--GGGC--CGG
T ss_pred             CCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEE-EEECC--cccC--ccc
Confidence            67899999999875 8888888887763 2899999999888776542    2     11110 00111  1100  011


Q ss_pred             cCCccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          212 NGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+.+|+|+........+..+.+.|+++ |+++..-.
T Consensus       149 ~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  183 (226)
T 1i1n_A          149 EAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPVG  183 (226)
T ss_dssp             GCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             CCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEe
Confidence            237999987665555667888999998 99887643

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=95.32  E-value=0.0096  Score=50.05  Aligned_cols=75  Identities=23%  Similarity=0.261  Sum_probs=48.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc--CCccEEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN--GGVDRSVE  220 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~d~Vid  220 (329)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+.  +  ...|..+.+ ++.+.+++...  +++|++|+
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~~~-~~~~~~~~~~~~~g~id~lv~   87 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTDSD-AVDRAFTAVEEHQGPVEVLVS   87 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTCHH-HHHHHHHHHHHHHSSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCCHH-HHHHHHHHHHHHcCCCCEEEE
Confidence            4788999986 9999999998888998 7888877665432211  1  223333321 23333333222  36999999


Q ss_pred             ecCC
Q 047713          221 CTGS  224 (329)
Q Consensus       221 ~~g~  224 (329)
                      +.|.
T Consensus        88 ~Ag~   91 (247)
T 1uzm_A           88 NAGL   91 (247)
T ss_dssp             ECSC
T ss_pred             CCCC
Confidence            9873

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.32  E-value=0.026  Score=49.55  Aligned_cols=74  Identities=19%  Similarity=0.262  Sum_probs=47.7

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH--HHHHhcCC--c-eee--CCCCCCchHHHHHHhhhcC-Cc
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRF--NEAKKFGV--T-EFV--NPKDYDKPVQQVIADMTNG-GV  215 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~--~~~~~lg~--~-~~~--~~~~~~~~~~~~~~~~~~~-~~  215 (329)
                      +.+|||+|+ |.+|..++..+...|. +|+++++++++.  +.++.++.  . ..+  |..+     .+.+.++..+ ++
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~~~~~~~~~~~   76 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLE-----FSNIIRTIEKVQP   76 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTC-----HHHHHHHHHHHCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCC-----HHHHHHHHHhcCC
Confidence            578999987 9999999998888898 898888776542  23444431  1 111  2221     1223333333 68


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |+||+++|.
T Consensus        77 d~vih~A~~   85 (345)
T 2z1m_A           77 DEVYNLAAQ   85 (345)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.32  E-value=0.05  Score=48.94  Aligned_cols=47  Identities=17%  Similarity=0.148  Sum_probs=39.4

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT  191 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~  191 (329)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++..+.+..+++|+.
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~  236 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLT  236 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCce
Confidence            58899999999999999999999998 899998876555556666654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.32  E-value=0.04  Score=46.65  Aligned_cols=78  Identities=19%  Similarity=0.218  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL-NPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~-~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +++++||+|+ |.+|.+++..+...|+ +|+.+++ ++++.+.    +++.+...   ..|..+. +++.+.+++...  
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP-SEVVALFDKAVSHF   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHc
Confidence            4789999986 9999999998888998 7888777 6655433    23334432   1233322 123333333322  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|++.|
T Consensus        98 ~~~d~vi~~Ag  108 (274)
T 1ja9_A           98 GGLDFVMSNSG  108 (274)
T ss_dssp             SCEEEEECCCC
T ss_pred             CCCCEEEECCC
Confidence            36999999887

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=95.32  E-value=0.049  Score=45.38  Aligned_cols=74  Identities=19%  Similarity=0.254  Sum_probs=46.4

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee--CCCCCCchHHHHHH---hhhc-CCc
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV--NPKDYDKPVQQVIA---DMTN-GGV  215 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~--~~~~~~~~~~~~~~---~~~~-~~~  215 (329)
                      ..++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+     +....+  |..+. +++.+.++   +..+ +++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~-~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFT-EQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHH-HHHHHHHHHHHHHHTTCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCH-HHHHHHHHHHHHHhCCCCC
Confidence            35789999986 9999999999988898 7888887765432     111111  21111 11222222   2222 479


Q ss_pred             cEEEEecC
Q 047713          216 DRSVECTG  223 (329)
Q Consensus       216 d~Vid~~g  223 (329)
                      |++|++.|
T Consensus        78 D~lv~~Ag   85 (241)
T 1dhr_A           78 DAILCVAG   85 (241)
T ss_dssp             EEEEECCC
T ss_pred             CEEEEccc
Confidence            99999987

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.31  E-value=0.041  Score=46.36  Aligned_cols=78  Identities=12%  Similarity=0.137  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHH---cCCCEEEEEcCChhhHHHH-Hhc-----CCce---eeCCCCCCchHHHHHHhh
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARV---SGASRIIGVDLNPSRFNEA-KKF-----GVTE---FVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~---~G~~~vv~~~~~~~~~~~~-~~l-----g~~~---~~~~~~~~~~~~~~~~~~  210 (329)
                      +++++||+|+ |++|.+++..+..   .|+ +|+.+++++++.+.+ +++     +...   ..|..+. ++..+.+.+.
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~   82 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTE-AGVQRLLSAV   82 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSH-HHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCH-HHHHHHHHHH
Confidence            3678999986 9999999987776   798 899888887765543 222     3221   1233332 1233444443


Q ss_pred             hc----CCcc--EEEEecC
Q 047713          211 TN----GGVD--RSVECTG  223 (329)
Q Consensus       211 ~~----~~~d--~Vid~~g  223 (329)
                      ..    +++|  ++|++.|
T Consensus        83 ~~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCC
T ss_pred             HhccccccCCccEEEECCc
Confidence            22    3577  9999877

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.30  E-value=0.038  Score=45.85  Aligned_cols=72  Identities=22%  Similarity=0.292  Sum_probs=45.6

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee--CCCCCCchHHHHHH---hhhc-CCccE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV--NPKDYDKPVQQVIA---DMTN-GGVDR  217 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~--~~~~~~~~~~~~~~---~~~~-~~~d~  217 (329)
                      ++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+     +....+  |..+. ++..+.++   +..+ +++|+
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWT-EQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHH-HHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCH-HHHHHHHHHHHHHhCCCCCCE
Confidence            578999986 9999999999988998 8888887765431     111111  11111 11222222   2222 47999


Q ss_pred             EEEecC
Q 047713          218 SVECTG  223 (329)
Q Consensus       218 Vid~~g  223 (329)
                      +|++.|
T Consensus        76 lv~~Ag   81 (236)
T 1ooe_A           76 VFCVAG   81 (236)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999988

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.30  E-value=0.048  Score=45.36  Aligned_cols=78  Identities=15%  Similarity=0.208  Sum_probs=49.1

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCC------EEEEEcCChhhHHHHH-hc---CCce---eeCCCCCCchHHHHHHhh
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGAS------RIIGVDLNPSRFNEAK-KF---GVTE---FVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~------~vv~~~~~~~~~~~~~-~l---g~~~---~~~~~~~~~~~~~~~~~~  210 (329)
                      ++++||+|+ |.+|.+++..+...|+.      +|+.+++++++.+.+. ++   +...   ..|..+. +++.+.++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDM-ADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSH-HHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCH-HHHHHHHHHH
Confidence            568999986 99999999988877874      6888888877655432 22   3221   1233321 1233333333


Q ss_pred             hc--CCccEEEEecC
Q 047713          211 TN--GGVDRSVECTG  223 (329)
Q Consensus       211 ~~--~~~d~Vid~~g  223 (329)
                      ..  +++|++|++.|
T Consensus        81 ~~~~g~id~li~~Ag   95 (244)
T 2bd0_A           81 VERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHHTSCCSEEEECCC
T ss_pred             HHhCCCCCEEEEcCC
Confidence            22  37999999887

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.29  E-value=0.044  Score=44.11  Aligned_cols=62  Identities=24%  Similarity=0.409  Sum_probs=41.9

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      ++||+|+ |.+|.+++..+. .|+ +|+.++++++          ....|..+.+ ++.+.+++.  +++|++|++.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~~~-~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITNID-SIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTCHH-HHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCCHH-HHHHHHHHh--CCCCEEEECCC
Confidence            7999986 999999999888 898 7888877653          1223333221 233333332  46899999887

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=95.27  E-value=0.054  Score=44.23  Aligned_cols=95  Identities=14%  Similarity=0.157  Sum_probs=58.3

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +|||+|+ |.+|..+++.+...|. +|+++++++++.+..  .+... ..|..+    ..+.+.+... ++|+||+++|.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~~~~~~D~~d----~~~~~~~~~~-~~d~vi~~ag~   73 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNVKAVHFDVDW----TPEEMAKQLH-GMDAIINVSGS   73 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTEEEEECCTTS----CHHHHHTTTT-TCSEEEECCCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCceEEEecccC----CHHHHHHHHc-CCCEEEECCcC
Confidence            5899986 9999999999988898 899998887654322  11211 112222    1234444433 69999999985


Q ss_pred             HH---------HHHHHHHhhccC-CeEEEEeccCC
Q 047713          225 VQ---------AMISAFECVHDG-WGVAVLVGVPN  249 (329)
Q Consensus       225 ~~---------~~~~~~~~l~~~-~G~vv~~g~~~  249 (329)
                      ..         .....++.+... .++++.++...
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence            32         122333333332 15888887643

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.27  E-value=0.036  Score=47.05  Aligned_cols=73  Identities=18%  Similarity=0.146  Sum_probs=47.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc--eeeCCCCCCchHHHHHHhhhc--CCccEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT--EFVNPKDYDKPVQQVIADMTN--GGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~--~~~d~V  218 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++     .+...  ...|..+.+ +....+++...  +++|++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~-----~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~G~iDil   82 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPE-----GLPEELFVEADLTTKE-GCAIVAEATRQRLGGVDVI   82 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCT-----TSCTTTEEECCTTSHH-HHHHHHHHHHHHTSSCSEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchh-----CCCcEEEEEcCCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            4899999986 9999999999999999 88888776432     11111  122333221 23333333322  379999


Q ss_pred             EEecC
Q 047713          219 VECTG  223 (329)
Q Consensus       219 id~~g  223 (329)
                      +++.|
T Consensus        83 VnnAG   87 (261)
T 4h15_A           83 VHMLG   87 (261)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99876

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.25  E-value=0.092  Score=40.74  Aligned_cols=99  Identities=21%  Similarity=0.191  Sum_probs=60.9

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc-CCccEEE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN-GGVDRSV  219 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~d~Vi  219 (329)
                      ++++++||-.|+|. |..+..+++..|. .++++++.++ ..+.    .-..++...-.+....+.+..... +.+|+|+
T Consensus        20 ~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~   93 (180)
T 1ej0_A           20 FKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKALLERVGDSKVQVVM   93 (180)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhhhccCCCCceeEEE
Confidence            67889999999876 8888888887642 3899999877 3221    111111111111112222333233 4899998


Q ss_pred             E-----ecCC------------HHHHHHHHHhhccCCeEEEEecc
Q 047713          220 E-----CTGS------------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       220 d-----~~g~------------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .     ..+.            ...+..+.++|+++ |.++....
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  137 (180)
T 1ej0_A           94 SDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVF  137 (180)
T ss_dssp             ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            6     2222            35677888899998 99887654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.25  E-value=0.042  Score=46.85  Aligned_cols=95  Identities=16%  Similarity=0.171  Sum_probs=57.8

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          147 SVAIFGL-GAVGLAAAEGARVS--GASRIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~--G~~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      +|||+|+ |.+|..++..+...  |. +|+++++++++.+.+...+...+. |..+    . +.+.++.. ++|+||.++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~d----~-~~l~~~~~-~~d~vi~~a   74 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYNQ----P-ESLQKAFA-GVSKLLFIS   74 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEECCTTC----H-HHHHHHTT-TCSEEEECC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEEeccCC----H-HHHHHHHh-cCCEEEEcC
Confidence            5899987 99999999988776  87 788888877665555444443322 3222    1 23333332 589999998


Q ss_pred             CCH-------HHHHHHHHhhccC-CeEEEEeccC
Q 047713          223 GSV-------QAMISAFECVHDG-WGVAVLVGVP  248 (329)
Q Consensus       223 g~~-------~~~~~~~~~l~~~-~G~vv~~g~~  248 (329)
                      +..       ......++.+... -++++.++..
T Consensus        75 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~  108 (287)
T 2jl1_A           75 GPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA  108 (287)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred             CCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            741       1122333444332 1478887653

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.25  E-value=0.1  Score=45.92  Aligned_cols=87  Identities=16%  Similarity=0.268  Sum_probs=60.0

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++ +..+++|...    .  +  +.+.+++     .|+|+.++.
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~--~--l~~~l~~-----aDvVil~vp  213 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF----K--P--LEDLLRE-----SDFVVLAVP  213 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE----C--C--HHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc----C--C--HHHHHhh-----CCEEEECCC
Confidence            57899999999999999999999998 89999888776 5556666531    1  1  3333332     688887776


Q ss_pred             CHH----HH-HHHHHhhccCCeEEEEec
Q 047713          224 SVQ----AM-ISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       224 ~~~----~~-~~~~~~l~~~~G~vv~~g  246 (329)
                      ...    .+ ...+..++++ ..++.++
T Consensus       214 ~~~~t~~~i~~~~~~~mk~~-ailIn~s  240 (334)
T 2dbq_A          214 LTRETYHLINEERLKLMKKT-AILINIA  240 (334)
T ss_dssp             CCTTTTTCBCHHHHHHSCTT-CEEEECS
T ss_pred             CChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            432    12 2445667775 6666655

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.25  E-value=0.082  Score=46.87  Aligned_cols=88  Identities=17%  Similarity=0.194  Sum_probs=59.7

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++. +.+...+.|...+   .  +  +.+.+++     .|+|+-++.
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~---~--~--l~ell~~-----aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA---E--S--KDALFEQ-----SDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC---S--S--HHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe---C--C--HHHHHhh-----CCEEEEecc
Confidence            58899999999999999999999999 899998765 3455566776432   0  1  3333332     578777664


Q ss_pred             CHHH-----HHHHHHhhccCCeEEEEec
Q 047713          224 SVQA-----MISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       224 ~~~~-----~~~~~~~l~~~~G~vv~~g  246 (329)
                      ..+.     -...+..++++ ..++.++
T Consensus       225 lt~~t~~li~~~~l~~mk~g-ailIN~a  251 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPT-ALFVNTS  251 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred             CcHHHHHhhCHHHHhhCCCC-cEEEECC
Confidence            2211     12455667776 7777776

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.24  E-value=0.058  Score=46.07  Aligned_cols=79  Identities=15%  Similarity=0.281  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHHh-cCCcee--eCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNP--SRFNEAKK-FGVTEF--VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~--~~~~~~~~-lg~~~~--~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +++++||+|+ |  ++|.+++..+...|+ +|+.++++.  +..+.+.+ .+....  .|..+. ++..+.+.+...  +
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISD-QEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCH-HHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCH-HHHHHHHHHHHHHcC
Confidence            4789999974 4  499999998888999 788888776  44444433 332222  233322 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|+++|.
T Consensus       103 ~id~li~nAg~  113 (280)
T 3nrc_A          103 GLDAIVHSIAF  113 (280)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.21  E-value=0.091  Score=46.53  Aligned_cols=90  Identities=18%  Similarity=0.281  Sum_probs=59.0

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHH-HcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGAR-VSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~-~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      -.|.+|.|+|.|.+|...++.++ ..|. +|++.+++.++.+...++|....   .  +  +.+.+++     .|+|+.+
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---~--~--l~ell~~-----aDvVil~  227 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV---D--S--LEELARR-----SDCVSVS  227 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC---S--S--HHHHHHH-----CSEEEEC
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe---C--C--HHHHhcc-----CCEEEEe
Confidence            35889999999999999999999 9998 89999887766665666665422   1  1  3222222     5777777


Q ss_pred             cCCHH----HH-HHHHHhhccCCeEEEEec
Q 047713          222 TGSVQ----AM-ISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       222 ~g~~~----~~-~~~~~~l~~~~G~vv~~g  246 (329)
                      +....    .+ ...+..++++ ..++.++
T Consensus       228 vp~~~~t~~li~~~~l~~mk~g-ailin~s  256 (348)
T 2w2k_A          228 VPYMKLTHHLIDEAFFAAMKPG-SRIVNTA  256 (348)
T ss_dssp             CCCSGGGTTCBCHHHHHHSCTT-EEEEECS
T ss_pred             CCCChHHHHHhhHHHHhcCCCC-CEEEECC
Confidence            65321    11 2344556665 5555554

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.21  E-value=0.085  Score=44.32  Aligned_cols=103  Identities=19%  Similarity=0.223  Sum_probs=66.6

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.....+.++.+||-.|+| .|..+..+++.. . +|++++.+++..+.+++.    +...+- ....+  ..+  ....
T Consensus        29 l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~-~~~~d--~~~--l~~~  100 (260)
T 1vl5_A           29 LMQIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVE-YVQGD--AEQ--MPFT  100 (260)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEE-EEECC--C-C--CCSC
T ss_pred             HHHHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceE-EEEec--HHh--CCCC
Confidence            4455567789999999887 577777777764 4 899999999888776653    322110 00000  000  0111


Q ss_pred             cCCccEEEEecCC------HHHHHHHHHhhccCCeEEEEecc
Q 047713          212 NGGVDRSVECTGS------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~~~~d~Vid~~g~------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+.+|+|+.....      ...+..+.+.|+++ |.++....
T Consensus       101 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~~  141 (260)
T 1vl5_A          101 DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVDN  141 (260)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEEc
Confidence            2379999866432      35678888999998 99888643

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.20  E-value=0.13  Score=43.97  Aligned_cols=73  Identities=18%  Similarity=0.218  Sum_probs=52.3

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ  226 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~  226 (329)
                      +|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|....-     +  ..+.+.+     .|+||.++..+.
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~-----~--~~~~~~~-----advvi~~v~~~~   69 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQAS-----S--PAEVCAA-----CDITIAMLADPA   69 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEECS-----C--HHHHHHH-----CSEEEECCSSHH
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeecC-----C--HHHHHHc-----CCEEEEEcCCHH
Confidence            58888999999998888887898 799999999998888777754221     1  3333322     588888887654


Q ss_pred             HHHHHH
Q 047713          227 AMISAF  232 (329)
Q Consensus       227 ~~~~~~  232 (329)
                      .+...+
T Consensus        70 ~~~~v~   75 (287)
T 3pdu_A           70 AAREVC   75 (287)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555444

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.18  E-value=0.065  Score=46.01  Aligned_cols=100  Identities=15%  Similarity=0.174  Sum_probs=64.5

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CC------ceeeCCCCCCchHHHHHHhhhcCC
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-GV------TEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-g~------~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      ..++.+||+.|+|. |..+..+++..+..+|++++.+++..+.+++. ..      +.-+.....+  ..+.+... .+.
T Consensus        76 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D--~~~~l~~~-~~~  151 (283)
T 2i7c_A           76 SKEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIED--ASKFLENV-TNT  151 (283)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESC--HHHHHHHC-CSC
T ss_pred             CCCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECC--hHHHHHhC-CCC
Confidence            34578999998753 66677777765555999999999998888763 21      0001111112  44434332 347


Q ss_pred             ccEEEE-ec---C------CHHHHHHHHHhhccCCeEEEEec
Q 047713          215 VDRSVE-CT---G------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       215 ~d~Vid-~~---g------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|+|+- ..   +      ..+.++.+.+.|+++ |.++...
T Consensus       152 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~  192 (283)
T 2i7c_A          152 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQC  192 (283)
T ss_dssp             EEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEC
Confidence            999874 21   1      146778888999998 9988764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.18  E-value=0.057  Score=45.72  Aligned_cols=78  Identities=18%  Similarity=0.207  Sum_probs=47.4

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEE-EEEcCChhhHHH----HHhcCCce-e--eCCCCCCchHHHHHHhhhc--C
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRI-IGVDLNPSRFNE----AKKFGVTE-F--VNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~v-v~~~~~~~~~~~----~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      ++++||+|+ |++|.+++..+...|+ +| +...++.++.+.    +++.+... .  .|..+. ++..+.+.+...  +
T Consensus        26 ~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           26 SRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANR-EQCREVLEHEIAQHG  103 (267)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHhC
Confidence            678999986 9999999999988999 56 445555554432    22333322 1  233222 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|++|+++|.
T Consensus       104 ~id~li~nAg~  114 (267)
T 4iiu_A          104 AWYGVVSNAGI  114 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CccEEEECCCC
Confidence            79999999873

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.17  E-value=0.069  Score=49.97  Aligned_cols=79  Identities=18%  Similarity=0.211  Sum_probs=51.3

Q ss_pred             CCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-------HHHHHhcCCcee---eCCCCCCchHHHHHHhh
Q 047713          142 PKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-------FNEAKKFGVTEF---VNPKDYDKPVQQVIADM  210 (329)
Q Consensus       142 ~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-------~~~~~~lg~~~~---~~~~~~~~~~~~~~~~~  210 (329)
                      ++++.++||+|+ |.+|..++..+...|+++|+.+.++...       .+.++..|....   .|..+.+ .+.+.+.+ 
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~-~v~~~~~~-  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERD-ALAALVTA-  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHH-HHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHH-HHHHHHhc-
Confidence            568899999986 9999999998888898668877776531       223344554322   2333211 22223322 


Q ss_pred             hcCCccEEEEecCC
Q 047713          211 TNGGVDRSVECTGS  224 (329)
Q Consensus       211 ~~~~~d~Vid~~g~  224 (329)
                        +.+|+||++.|.
T Consensus       334 --~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 --YPPNAVFHTAGI  345 (511)
T ss_dssp             --SCCSEEEECCCC
T ss_pred             --CCCcEEEECCcc
Confidence              479999999873

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.16  E-value=0.2  Score=43.47  Aligned_cols=88  Identities=14%  Similarity=0.181  Sum_probs=59.9

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      .+|.|+|+|.+|...+..+...|. .|+..++++++.+.+.+.|....   .  +  ..+.+.     ..|+||.++..+
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~---~--~--~~~~~~-----~~DvVi~av~~~   97 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARLG---R--T--PAEVVS-----TCDITFACVSDP   97 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEEC---S--C--HHHHHH-----HCSEEEECCSSH
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEEc---C--C--HHHHHh-----cCCEEEEeCCCH
Confidence            469999999999999988888888 78889888888887777665321   1  1  322222     379999999755


Q ss_pred             HHHHHHHH-------hhccCCeEEEEecc
Q 047713          226 QAMISAFE-------CVHDGWGVAVLVGV  247 (329)
Q Consensus       226 ~~~~~~~~-------~l~~~~G~vv~~g~  247 (329)
                      ..+...+.       .+.++ ..++.++.
T Consensus        98 ~~~~~v~~~~~~~~~~l~~~-~~vv~~s~  125 (316)
T 2uyy_A           98 KAAKDLVLGPSGVLQGIRPG-KCYVDMST  125 (316)
T ss_dssp             HHHHHHHHSTTCGGGGCCTT-CEEEECSC
T ss_pred             HHHHHHHcCchhHhhcCCCC-CEEEECCC
Confidence            55555543       24454 55555543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=95.16  E-value=0.069  Score=45.44  Aligned_cols=79  Identities=18%  Similarity=0.198  Sum_probs=49.2

Q ss_pred             CCCeEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHHHH-hcCCce--eeCCCCCCchHHHHHHhhh--c
Q 047713          144 KGQSVAIFGL---GAVGLAAAEGARVSGASRIIGVDLNPS---RFNEAK-KFGVTE--FVNPKDYDKPVQQVIADMT--N  212 (329)
Q Consensus       144 ~g~~VlI~Ga---g~iG~aai~la~~~G~~~vv~~~~~~~---~~~~~~-~lg~~~--~~~~~~~~~~~~~~~~~~~--~  212 (329)
                      .++++||+|+   |++|.+++..+...|+ +|+.++++++   ..+.++ +.+...  ..|..+. ++..+.+.+..  .
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKE-EHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4789999974   7999999999888898 7888877764   333332 234211  2233322 12333333332  2


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++|++.|.
T Consensus        83 g~id~lv~nAg~   94 (275)
T 2pd4_A           83 GSLDFIVHSVAF   94 (275)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999999873

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.13  E-value=0.023  Score=49.71  Aligned_cols=78  Identities=14%  Similarity=0.081  Sum_probs=46.5

Q ss_pred             CCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHhcC----Ccee-eCCCCCCchHHHHHHhhhc
Q 047713          141 KPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR--FNEAKKFG----VTEF-VNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       141 ~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~--~~~~~~lg----~~~~-~~~~~~~~~~~~~~~~~~~  212 (329)
                      .-+++.+|||+|+ |.+|..++..+...|. .|+++++++++  .+.++.+.    ...+ .|..+     ...+.++..
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~~~~~~~   83 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD-----ACSVQRAVI   83 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTC-----HHHHHHHHH
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCCC-----HHHHHHHHH
Confidence            3467899999987 9999999998888898 88888776543  12233331    1111 12222     122333333


Q ss_pred             C-CccEEEEecCC
Q 047713          213 G-GVDRSVECTGS  224 (329)
Q Consensus       213 ~-~~d~Vid~~g~  224 (329)
                      + ++|+||.++|.
T Consensus        84 ~~~~d~Vih~A~~   96 (335)
T 1rpn_A           84 KAQPQEVYNLAAQ   96 (335)
T ss_dssp             HHCCSEEEECCSC
T ss_pred             HcCCCEEEECccc
Confidence            3 68999999873

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.13  E-value=0.073  Score=48.84  Aligned_cols=103  Identities=16%  Similarity=0.191  Sum_probs=67.2

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHH-HcCC--CEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcCCcc
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGAR-VSGA--SRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVD  216 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~-~~G~--~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d  216 (329)
                      ++....+|+|+|+|+||.+++.++. ..+.  ..|+.++..+...+..+.+|.... ......+  ..+.+.++..++ |
T Consensus         9 ~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadn--v~~~l~aLl~~~-D   85 (480)
T 2ph5_A            9 KILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQN--YLEVIGSTLEEN-D   85 (480)
T ss_dssp             CBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTT--HHHHTGGGCCTT-C
T ss_pred             eecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchh--HHHHHHHHhcCC-C
Confidence            3445568999999999999998765 4444  257777776665566666675322 2222222  555566555555 9


Q ss_pred             EEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          217 RSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       217 ~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|++.+-....+...-.|++.+ -.++....
T Consensus        86 vVIN~s~~~~~l~Im~acleaG-v~YlDTa~  115 (480)
T 2ph5_A           86 FLIDVSIGISSLALIILCNQKG-ALYINAAT  115 (480)
T ss_dssp             EEEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred             EEEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence            9999875555566666677776 67777764

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=95.12  E-value=0.086  Score=46.41  Aligned_cols=89  Identities=22%  Similarity=0.299  Sum_probs=63.3

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      -.|.+|.|+|.|.+|...++.++.+|. +|++.+++.++ +.++++|+...      +  +.+.++     ..|+|+.++
T Consensus       163 l~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~------~--l~ell~-----~aDvV~l~~  227 (335)
T 2g76_A          163 LNGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQL------P--LEEIWP-----LCDFITVHT  227 (335)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEEC------C--HHHHGG-----GCSEEEECC
T ss_pred             CCcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCceeC------C--HHHHHh-----cCCEEEEec
Confidence            358899999999999999999999998 89999887655 35667776421      1  332222     378998887


Q ss_pred             CCHH----HH-HHHHHhhccCCeEEEEecc
Q 047713          223 GSVQ----AM-ISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       223 g~~~----~~-~~~~~~l~~~~G~vv~~g~  247 (329)
                      ...+    .+ ...+..++++ +.++.++.
T Consensus       228 P~t~~t~~li~~~~l~~mk~g-ailIN~ar  256 (335)
T 2g76_A          228 PLLPSTTGLLNDNTFAQCKKG-VRVVNCAR  256 (335)
T ss_dssp             CCCTTTTTSBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence            6432    12 3566778887 77777765

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.10  E-value=0.077  Score=43.61  Aligned_cols=98  Identities=17%  Similarity=0.302  Sum_probs=63.3

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eeeCCCCCCchHHHHHHhhhcCC
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVT-EFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      ..++++++||-.|+|..|..++.+++..+. +|++++.+++..+.+++    .+.. .++.. +..     .+..+..+.
T Consensus        51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~-d~~-----~~~~~~~~~  123 (230)
T 3evz_A           51 TFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKS-NGG-----IIKGVVEGT  123 (230)
T ss_dssp             TTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEEC-SSC-----SSTTTCCSC
T ss_pred             hhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeC-Cch-----hhhhcccCc
Confidence            345789999999888568888888887666 99999999988777654    3321 11111 100     011122247


Q ss_pred             ccEEEEecC-------------------------CHHHHHHHHHhhccCCeEEEEe
Q 047713          215 VDRSVECTG-------------------------SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       215 ~d~Vid~~g-------------------------~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      +|+|+-.-.                         ....+..+.+.|+++ |+++.+
T Consensus       124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  178 (230)
T 3evz_A          124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALY  178 (230)
T ss_dssp             EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEE
Confidence            999984311                         034677778889998 988876

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.07  E-value=0.25  Score=42.01  Aligned_cols=84  Identities=21%  Similarity=0.309  Sum_probs=57.2

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      +|.|+|+|.+|.+.+..+...|. .|++.++++++.+.+++.|... ...  +        +.+.  .+.|+||.++.. 
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~--~--------~~~~--~~~D~vi~av~~-   67 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ--D--------LSLL--QTAKIIFLCTPI-   67 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES--C--------GGGG--TTCSEEEECSCH-
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC--C--------HHHh--CCCCEEEEECCH-
Confidence            57889999999999998888898 8999999999888888777531 111  1        1122  358999999954 


Q ss_pred             HHHHHHHHh----hccCCeEEEEe
Q 047713          226 QAMISAFEC----VHDGWGVAVLV  245 (329)
Q Consensus       226 ~~~~~~~~~----l~~~~G~vv~~  245 (329)
                      ......++.    ++++ ..++.+
T Consensus        68 ~~~~~~~~~l~~~~~~~-~~vv~~   90 (279)
T 2f1k_A           68 QLILPTLEKLIPHLSPT-AIVTDV   90 (279)
T ss_dssp             HHHHHHHHHHGGGSCTT-CEEEEC
T ss_pred             HHHHHHHHHHHhhCCCC-CEEEEC
Confidence            344444333    3444 455554

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.07  E-value=0.12  Score=44.23  Aligned_cols=100  Identities=14%  Similarity=0.109  Sum_probs=65.6

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcCCcc
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNGGVD  216 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~d  216 (329)
                      .+.++.+||-+|+| .|..+..+++..|. +|++++.++...+.+++    .|...-+.....+  +.+  .....+.+|
T Consensus        79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~--~~~~~~~fD  152 (297)
T 2o57_A           79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGS--FLE--IPCEDNSYD  152 (297)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECC--TTS--CSSCTTCEE
T ss_pred             CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcC--ccc--CCCCCCCEe
Confidence            77889999999987 57888888887787 89999999988776654    2321100000001  000  011123799


Q ss_pred             EEEEecCC------HHHHHHHHHhhccCCeEEEEecc
Q 047713          217 RSVECTGS------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       217 ~Vid~~g~------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|+.....      ...+..+.++|+++ |.++....
T Consensus       153 ~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  188 (297)
T 2o57_A          153 FIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  188 (297)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            99854321      35678888999998 99887754

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.07  E-value=0.074  Score=48.99  Aligned_cols=79  Identities=25%  Similarity=0.359  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH---HHHHhcCCce-eeCCCCCCchHHHHHHhh---hcCCc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRF---NEAKKFGVTE-FVNPKDYDKPVQQVIADM---TNGGV  215 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~---~~~~~lg~~~-~~~~~~~~~~~~~~~~~~---~~~~~  215 (329)
                      +++++||+|+ |++|.+++..+...|+ +|+.+++++...   +..++++... ..|..+.+ +..+.+.+.   .++.+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~-~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGTALTLDVTADD-AVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTT-HHHHHHHHHHHHSTTCC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHH-HHHHHHHHHHHHcCCCc
Confidence            5789999976 9999999998888899 788887754322   2344555533 23433332 233333333   22249


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |++|++.|.
T Consensus       290 d~lV~nAGv  298 (454)
T 3u0b_A          290 DILVNNAGI  298 (454)
T ss_dssp             SEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999999884

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=95.07  E-value=0.035  Score=44.63  Aligned_cols=95  Identities=17%  Similarity=0.194  Sum_probs=56.2

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .+|||+|+ |.+|..+++.+...|. +|+++++++++.+....-+...+ .|..+    . +.+.+.. .++|+||++.|
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~~----~-~~~~~~~-~~~d~vi~~a~   76 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVLQ----A-ADVDKTV-AGQDAVIVLLG   76 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEESCTTS----H-HHHHHHH-TTCSEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCceEEEEecCCC----H-HHHHHHH-cCCCEEEECcc
Confidence            68999987 9999999998888898 89988888765432111122111 12222    1 2233332 25899999987


Q ss_pred             CHH----------HHHHHHHhhcc-CCeEEEEecc
Q 047713          224 SVQ----------AMISAFECVHD-GWGVAVLVGV  247 (329)
Q Consensus       224 ~~~----------~~~~~~~~l~~-~~G~vv~~g~  247 (329)
                      ...          .....++.+.. +.++++.++.
T Consensus        77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss  111 (206)
T 1hdo_A           77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (206)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence            432          12233333332 2157887764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.05  E-value=0.065  Score=45.44  Aligned_cols=78  Identities=13%  Similarity=0.252  Sum_probs=49.5

Q ss_pred             CCCeEEEEc---CCHHHHHHHHHHHHcCCCEEEEEcCChhh-HH-HHHhcCCce---eeCCCCCCchHHHHHHh---hhc
Q 047713          144 KGQSVAIFG---LGAVGLAAAEGARVSGASRIIGVDLNPSR-FN-EAKKFGVTE---FVNPKDYDKPVQQVIAD---MTN  212 (329)
Q Consensus       144 ~g~~VlI~G---ag~iG~aai~la~~~G~~~vv~~~~~~~~-~~-~~~~lg~~~---~~~~~~~~~~~~~~~~~---~~~  212 (329)
                      +++++||+|   +|++|.+++..+...|+ +|+.+++++++ .+ ..++++...   ..|..+.+ +..+.+.+   ..+
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEE-HLASLAGRVTEAIG   83 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHH-HHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCCHH-HHHHHHHHHHHHhC
Confidence            478999997   58999999998888999 78888877654 23 334444321   12333221 23333332   222


Q ss_pred             --CCccEEEEecC
Q 047713          213 --GGVDRSVECTG  223 (329)
Q Consensus       213 --~~~d~Vid~~g  223 (329)
                        +++|++|++.|
T Consensus        84 ~~~~iD~lv~nAg   96 (269)
T 2h7i_A           84 AGNKLDGVVHSIG   96 (269)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             CCCCceEEEECCc
Confidence              16999999987

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=95.05  E-value=0.075  Score=45.04  Aligned_cols=78  Identities=15%  Similarity=0.231  Sum_probs=47.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD-LNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~-~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      .++++||+|+ +++|.+++..+...|+ +|+.++ ++.++.+.    .++.+...   ..|..+.+ +..+.+.+...  
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~  101 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFE-SCERCAEKVLADF  101 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHc
Confidence            4788999986 9999999999888999 777776 44444332    22233221   12333221 23333333322  


Q ss_pred             CCccEEEEecC
Q 047713          213 GGVDRSVECTG  223 (329)
Q Consensus       213 ~~~d~Vid~~g  223 (329)
                      +++|++|+++|
T Consensus       102 g~id~li~nAg  112 (269)
T 3gk3_A          102 GKVDVLINNAG  112 (269)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.04  E-value=0.038  Score=46.43  Aligned_cols=81  Identities=20%  Similarity=0.300  Sum_probs=47.7

Q ss_pred             CCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhH----HHHHhcCCcee---eCCCCCCchHHHHHHhhhc
Q 047713          142 PKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVD-LNPSRF----NEAKKFGVTEF---VNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       142 ~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~-~~~~~~----~~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~  212 (329)
                      ..++++|||+|+ |++|.+++..+...|+ +|+.++ ++.++.    +.+++.+....   .|..+. ++..+.+++...
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~   87 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDW-DSTKQAFDKVKA   87 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCH-HHHHHHHHHHHH
Confidence            356889999986 9999999998888899 677665 333322    23334443221   233221 123333333322


Q ss_pred             --CCccEEEEecCC
Q 047713          213 --GGVDRSVECTGS  224 (329)
Q Consensus       213 --~~~d~Vid~~g~  224 (329)
                        +++|++|+++|.
T Consensus        88 ~~g~id~lv~~Ag~  101 (256)
T 3ezl_A           88 EVGEIDVLVNNAGI  101 (256)
T ss_dssp             HTCCEEEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence              379999999873

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.03  E-value=0.062  Score=45.47  Aligned_cols=102  Identities=18%  Similarity=0.309  Sum_probs=67.8

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCc---eeeCCCCCCchHHHHHH
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVT---EFVNPKDYDKPVQQVIA  208 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~---~~~~~~~~~~~~~~~~~  208 (329)
                      +.....+.++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++.    +..   .++...-.+  +     
T Consensus        53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~-----  123 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADAMD--L-----  123 (273)
T ss_dssp             HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--C-----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc--C-----
Confidence            45667788999999999874 7888888887787 999999999887766543    321   111110000  0     


Q ss_pred             hhhcCCccEEEEecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          209 DMTNGGVDRSVECTG------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       209 ~~~~~~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ....+.+|+|+-...      ....+..+.++|+++ |+++....
T Consensus       124 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~  167 (273)
T 3bus_A          124 PFEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIADF  167 (273)
T ss_dssp             CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEEE
T ss_pred             CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            011237999974321      234677888899998 98887653

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.03  E-value=0.14  Score=47.71  Aligned_cols=82  Identities=17%  Similarity=0.262  Sum_probs=53.3

Q ss_pred             CCCC--CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-------hHHHHHhcCCceee---CCCCCCchHHHHHH
Q 047713          142 PKKG--QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS-------RFNEAKKFGVTEFV---NPKDYDKPVQQVIA  208 (329)
Q Consensus       142 ~~~g--~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~-------~~~~~~~lg~~~~~---~~~~~~~~~~~~~~  208 (329)
                      ++++  .++||+|+ |++|.+++..+...|+++|+.+.++..       ..+.+++.|....+   |..+. +++.+.+.
T Consensus       234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~-~~v~~~~~  312 (496)
T 3mje_A          234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADR-EALAALLA  312 (496)
T ss_dssp             CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCH-HHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHH
Confidence            3455  89999976 999999999888889877888777532       12334556654322   33222 23444444


Q ss_pred             hhhcC-CccEEEEecCC
Q 047713          209 DMTNG-GVDRSVECTGS  224 (329)
Q Consensus       209 ~~~~~-~~d~Vid~~g~  224 (329)
                      ++... ++|+||++.|.
T Consensus       313 ~i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          313 ELPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             TCCTTSCEEEEEECCCC
T ss_pred             HHHHhCCCeEEEECCcc
Confidence            44333 79999999884

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.03  E-value=0.026  Score=46.59  Aligned_cols=94  Identities=17%  Similarity=0.108  Sum_probs=64.8

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhh-cCCccEEEE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMT-NGGVDRSVE  220 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~-~~~~d~Vid  220 (329)
                      .++.+||-.|+|. |..+..+++. +. +|++++.++...+.+++.... .++.. +.    ... .... .+.+|+|+.
T Consensus        47 ~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~-d~----~~~-~~~~~~~~fD~v~~  117 (226)
T 3m33_A           47 TPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEW-NG----KGE-LPAGLGAPFGLIVS  117 (226)
T ss_dssp             CTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEEC-CS----CSS-CCTTCCCCEEEEEE
T ss_pred             CCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEc-ch----hhc-cCCcCCCCEEEEEe
Confidence            6788999998764 7777777776 66 999999999998888775321 11111 10    000 0111 247999998


Q ss_pred             ecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          221 CTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       221 ~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .......+..+.+.|+++ |.++..+
T Consensus       118 ~~~~~~~l~~~~~~Lkpg-G~l~~~~  142 (226)
T 3m33_A          118 RRGPTSVILRLPELAAPD-AHFLYVG  142 (226)
T ss_dssp             ESCCSGGGGGHHHHEEEE-EEEEEEE
T ss_pred             CCCHHHHHHHHHHHcCCC-cEEEEeC
Confidence            766667788899999998 9998443

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.01  E-value=0.093  Score=46.13  Aligned_cols=88  Identities=20%  Similarity=0.208  Sum_probs=58.2

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++.+...++|....      +  +.+.++     ..|+|+.++.
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~------~--l~e~l~-----~aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV------S--TPELAA-----QSDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC------C--HHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC------C--HHHHHh-----hCCEEEEeCC
Confidence            47899999999999999999999998 78888877665555566654321      1  333232     2588887775


Q ss_pred             CHH----HH-HHHHHhhccCCeEEEEec
Q 047713          224 SVQ----AM-ISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       224 ~~~----~~-~~~~~~l~~~~G~vv~~g  246 (329)
                      ...    .+ ...+..++++ ..++.++
T Consensus       220 ~~~~t~~~i~~~~~~~mk~g-ailIn~s  246 (330)
T 2gcg_A          220 LTPATEGLCNKDFFQKMKET-AVFINIS  246 (330)
T ss_dssp             CCTTTTTCBSHHHHHHSCTT-CEEEECS
T ss_pred             CChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            321    12 2345566665 5565554

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.01  E-value=0.33  Score=42.02  Aligned_cols=89  Identities=16%  Similarity=0.110  Sum_probs=61.8

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      ..+|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|....-     +  ..+.+++     .|+||.++..
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~-----~--~~e~~~~-----aDvVi~~vp~   75 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHLCE-----S--VKAALSA-----SPATIFVLLD   75 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEECS-----S--HHHHHHH-----SSEEEECCSS
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeecC-----C--HHHHHhc-----CCEEEEEeCC
Confidence            4579999999999999998888898 799999999998888777763211     1  3333332     6899999876


Q ss_pred             HHHHHHHHH-----hhccCCeEEEEecc
Q 047713          225 VQAMISAFE-----CVHDGWGVAVLVGV  247 (329)
Q Consensus       225 ~~~~~~~~~-----~l~~~~G~vv~~g~  247 (329)
                      +......+.     .+.++ ..++.++.
T Consensus        76 ~~~~~~v~~~~~l~~~~~g-~ivid~st  102 (306)
T 3l6d_A           76 NHATHEVLGMPGVARALAH-RTIVDYTT  102 (306)
T ss_dssp             HHHHHHHHTSTTHHHHTTT-CEEEECCC
T ss_pred             HHHHHHHhcccchhhccCC-CEEEECCC
Confidence            654444332     23444 55665554

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.00  E-value=0.1  Score=45.21  Aligned_cols=100  Identities=14%  Similarity=0.163  Sum_probs=63.6

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-------ceeeCCCCCCchHHHHHHhhhcCC
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV-------TEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~-------~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-.       ..-+.....+  ..+.+.. ..+.
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~D--a~~~l~~-~~~~  168 (304)
T 2o07_A           93 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGD--GFEFMKQ-NQDA  168 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC--HHHHHHT-CSSC
T ss_pred             CCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECc--HHHHHhh-CCCC
Confidence            35678999998753 6777778876655599999999998888776311       0001111122  3333333 2347


Q ss_pred             ccEEE-EecC---------CHHHHHHHHHhhccCCeEEEEec
Q 047713          215 VDRSV-ECTG---------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       215 ~d~Vi-d~~g---------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|+|| |..-         ..+.++.+.++|+++ |.++.-.
T Consensus       169 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  209 (304)
T 2o07_A          169 FDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  209 (304)
T ss_dssp             EEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ceEEEECCCCCCCcchhhhHHHHHHHHHhccCCC-eEEEEec
Confidence            99988 3321         124578888999998 9888754

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=94.98  E-value=0.073  Score=45.84  Aligned_cols=73  Identities=16%  Similarity=0.222  Sum_probs=47.1

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-------hhHHHHH---hcCCcee-eCCCCCCchHHHHHHhhhc
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP-------SRFNEAK---KFGVTEF-VNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~-------~~~~~~~---~lg~~~~-~~~~~~~~~~~~~~~~~~~  212 (329)
                      +.+|||+|+ |.+|..++..+...|. .|+++++++       ++.+.++   ..+...+ .|..+    . +.+.++..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d----~-~~l~~~~~   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND----H-ETLVKAIK   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTC----H-HHHHHHHT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCC----H-HHHHHHHh
Confidence            457999987 9999999998887887 677777765       4444333   3354332 23322    1 22333332


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                       ++|+||+++|.
T Consensus        76 -~~d~vi~~a~~   86 (307)
T 2gas_A           76 -QVDIVICAAGR   86 (307)
T ss_dssp             -TCSEEEECSSS
T ss_pred             -CCCEEEECCcc
Confidence             59999999874

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=94.97  E-value=0.068  Score=48.83  Aligned_cols=104  Identities=16%  Similarity=0.265  Sum_probs=66.2

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcC
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  213 (329)
                      ....+++|++||-.|+|+ |..+++++...+...|++++.++.+.+.+++    +|....+...+.. .+..   ...++
T Consensus       240 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~-~~~~---~~~~~  314 (429)
T 1sqg_A          240 TWLAPQNGEHILDLCAAP-GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR-YPSQ---WCGEQ  314 (429)
T ss_dssp             HHHCCCTTCEEEEESCTT-CHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTT-CTHH---HHTTC
T ss_pred             HHcCCCCcCeEEEECCCc-hHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchh-hchh---hcccC
Confidence            344678999999988765 6777778877653489999999988876654    4542211111111 0111   12224


Q ss_pred             CccEEEE---ecCC-------------------------HHHHHHHHHhhccCCeEEEEecc
Q 047713          214 GVDRSVE---CTGS-------------------------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       214 ~~d~Vid---~~g~-------------------------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .||.|+-   |+|.                         ...+..+.++|+++ |+++....
T Consensus       315 ~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpG-G~lvystc  375 (429)
T 1sqg_A          315 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYATC  375 (429)
T ss_dssp             CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEEES
T ss_pred             CCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence            7999974   4442                         24577788889998 99887653

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=94.96  E-value=0.048  Score=46.62  Aligned_cols=98  Identities=17%  Similarity=0.122  Sum_probs=63.6

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC------C-ceeeCCCCCCchHHHHHHhhhcCCcc
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG------V-TEFVNPKDYDKPVQQVIADMTNGGVD  216 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg------~-~~~~~~~~~~~~~~~~~~~~~~~~~d  216 (329)
                      ++.+||+.|+|. |..+..+++..+..+|++++.+++-.+.+++.-      . +.-+.....+  ..+.+.. ..+.+|
T Consensus        75 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D--~~~~l~~-~~~~fD  150 (275)
T 1iy9_A           75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDD--GFMHIAK-SENQYD  150 (275)
T ss_dssp             SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESC--SHHHHHT-CCSCEE
T ss_pred             CCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECc--HHHHHhh-CCCCee
Confidence            468999998753 666777777767669999999999888877631      1 0000001111  2233333 234799


Q ss_pred             EEEEecCC----------HHHHHHHHHhhccCCeEEEEec
Q 047713          217 RSVECTGS----------VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       217 ~Vid~~g~----------~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|+-..-.          .+.++.+.+.|+++ |.++...
T Consensus       151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~  189 (275)
T 1iy9_A          151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (275)
T ss_dssp             EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             EEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            98743211          46788999999998 9888763

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=94.96  E-value=0.077  Score=45.56  Aligned_cols=75  Identities=17%  Similarity=0.195  Sum_probs=49.3

Q ss_pred             CCCCeEEEEc-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhc----CCc-eeeCCCCCCchHHHHHHhhhcCCc
Q 047713          143 KKGQSVAIFG-LGAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKF----GVT-EFVNPKDYDKPVQQVIADMTNGGV  215 (329)
Q Consensus       143 ~~g~~VlI~G-ag~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~  215 (329)
                      -+|+++||+| +|++|.+++..+...|+ +|+.+.++.++.+. ++++    +.. ...+..+    . +.+.+.. ..+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~----~-~~~~~~~-~~~  189 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD----D-ASRAEAV-KGA  189 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS----H-HHHHHHT-TTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC----H-HHHHHHH-HhC
Confidence            3688999998 59999999999999999 68888888776553 3333    221 1122222    1 1233322 248


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |++|+++|.
T Consensus       190 DvlVn~ag~  198 (287)
T 1lu9_A          190 HFVFTAGAI  198 (287)
T ss_dssp             SEEEECCCT
T ss_pred             CEEEECCCc
Confidence            999999963

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=94.95  E-value=0.15  Score=41.21  Aligned_cols=48  Identities=13%  Similarity=0.070  Sum_probs=38.4

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF  188 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l  188 (329)
                      ....+.++.+||..|+|. |..+..+++. |. +|++++.+++..+.+++.
T Consensus        16 ~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~   63 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTE   63 (203)
T ss_dssp             HHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHH
T ss_pred             HhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHH
Confidence            445667889999998764 7777888876 87 899999999988887653

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=94.94  E-value=0.048  Score=45.98  Aligned_cols=95  Identities=15%  Similarity=0.069  Sum_probs=61.0

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCc-------------------eeeCCCCCCc
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVT-------------------EFVNPKDYDK  201 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~-------------------~~~~~~~~~~  201 (329)
                      ..++.+||..|+|. |..+..+|+. |. .|++++.++...+.+++ .+..                   .-+.....+ 
T Consensus        66 ~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D-  141 (252)
T 2gb4_A           66 GQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS-  141 (252)
T ss_dssp             TCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC-
T ss_pred             CCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc-
Confidence            45788999998864 7777788775 88 89999999999888764 3210                   000000011 


Q ss_pred             hHHHHHHhhh--c-CCccEEEEecCC--------HHHHHHHHHhhccCCeEEEEec
Q 047713          202 PVQQVIADMT--N-GGVDRSVECTGS--------VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       202 ~~~~~~~~~~--~-~~~d~Vid~~g~--------~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                           +.++.  . +.||+|++..--        ...+....++|+++ |+++++.
T Consensus       142 -----~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG-G~l~l~~  191 (252)
T 2gb4_A          142 -----IFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE-FQYLVAV  191 (252)
T ss_dssp             -----TTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             -----cccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC-eEEEEEE
Confidence                 11111  1 479999974321        23567778899998 9986543

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=94.93  E-value=0.13  Score=44.23  Aligned_cols=45  Identities=24%  Similarity=0.366  Sum_probs=36.9

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF  188 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l  188 (329)
                      .++.+||-+|+|. |..++.+++..+..+|++++.++...+.+++.
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            3578999998864 78888999987655999999999988887764

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=94.88  E-value=0.14  Score=42.28  Aligned_cols=104  Identities=16%  Similarity=0.239  Sum_probs=66.3

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCc
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGV  215 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (329)
                      +.......++.+||-.|+|. |..+..+++. |..+|++++.+++..+.+++.....-+.....+  ... + ....+.+
T Consensus        35 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d--~~~-~-~~~~~~f  108 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERAD--LDK-L-HLPQDSF  108 (243)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECC--GGG-C-CCCTTCE
T ss_pred             HHHhccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcC--hhh-c-cCCCCCc
Confidence            44455566889999998764 6667777765 555899999999999888876432111111111  110 0 0112379


Q ss_pred             cEEEEecC------CHHHHHHHHHhhccCCeEEEEec
Q 047713          216 DRSVECTG------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       216 d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+|+....      ....+..+.++|+++ |.++...
T Consensus       109 D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  144 (243)
T 3bkw_A          109 DLAYSSLALHYVEDVARLFRTVHQALSPG-GHFVFST  144 (243)
T ss_dssp             EEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             eEEEEeccccccchHHHHHHHHHHhcCcC-cEEEEEe
Confidence            99986532      134677888899998 9888754

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=94.86  E-value=0.14  Score=44.32  Aligned_cols=73  Identities=16%  Similarity=0.152  Sum_probs=45.6

Q ss_pred             CCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcC-CccEE
Q 047713          142 PKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNG-GVDRS  218 (329)
Q Consensus       142 ~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~-~~d~V  218 (329)
                      .++-.+|||+|+ |.+|..+++.+...|. .|+++++++.+ +.   ++...+ .|..+     .+.+.++..+ ++|+|
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~~~~~~Dl~d-----~~~~~~~~~~~~~d~v   78 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNVEMISLDIMD-----SQRVKKVISDIKPDYI   78 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTEEEEECCTTC-----HHHHHHHHHHHCCSEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---ceeeEEECCCCC-----HHHHHHHHHhcCCCEE
Confidence            356679999987 9999999998888898 88888876654 11   232221 12222     1223333333 68999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      |.++|.
T Consensus        79 ih~A~~   84 (321)
T 2pk3_A           79 FHLAAK   84 (321)
T ss_dssp             EECCSC
T ss_pred             EEcCcc
Confidence            999874

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=94.85  E-value=0.11  Score=47.70  Aligned_cols=93  Identities=11%  Similarity=0.010  Sum_probs=55.8

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCcee--eCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVTEF--VNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      +.+|+|+|+|.+|.+++..+...|. +|++++++.++.+.+. +++....  .+..+    . +.+.++.. ++|+|+++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d----~-~~l~~~l~-~~DvVIn~   75 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVND----D-AALDAEVA-KHDLVISL   75 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCTTC----H-HHHHHHHT-TSSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeecCC----H-HHHHHHHc-CCcEEEEC
Confidence            5689999999999999998888887 7888888877665432 2332111  12222    2 12333222 59999999


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEEe
Q 047713          222 TGSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      ++..........++..+ -+++..
T Consensus        76 a~~~~~~~i~~a~l~~g-~~vvd~   98 (450)
T 1ff9_A           76 IPYTFHATVIKSAIRQK-KHVVTT   98 (450)
T ss_dssp             CC--CHHHHHHHHHHHT-CEEEES
T ss_pred             CccccchHHHHHHHhCC-CeEEEe
Confidence            97532223344455554 444443

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=94.85  E-value=0.13  Score=45.00  Aligned_cols=90  Identities=16%  Similarity=0.196  Sum_probs=59.2

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL-NPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~-~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      -.|.+|.|+|.|.+|...++.++.+|. +|++.++ +.++ +..+++|+.. .  .  +  +.+.+.     ..|+|+.+
T Consensus       144 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~-~--~--~--l~ell~-----~aDvVil~  209 (320)
T 1gdh_A          144 LDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF-H--D--S--LDSLLS-----VSQFFSLN  209 (320)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE-C--S--S--HHHHHH-----HCSEEEEC
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE-c--C--C--HHHHHh-----hCCEEEEe
Confidence            358899999999999999999999998 8999988 6655 3455667632 1  0  1  322222     25777777


Q ss_pred             cCCHH----HH-HHHHHhhccCCeEEEEecc
Q 047713          222 TGSVQ----AM-ISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       222 ~g~~~----~~-~~~~~~l~~~~G~vv~~g~  247 (329)
                      +...+    .+ ...+..++++ ..++.++.
T Consensus       210 ~p~~~~t~~~i~~~~l~~mk~g-ailIn~ar  239 (320)
T 1gdh_A          210 APSTPETRYFFNKATIKSLPQG-AIVVNTAR  239 (320)
T ss_dssp             CCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             ccCchHHHhhcCHHHHhhCCCC-cEEEECCC
Confidence            65321    11 2345567765 66666654

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=94.83  E-value=0.33  Score=41.64  Aligned_cols=87  Identities=20%  Similarity=0.229  Sum_probs=59.1

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      .+|.|+|+|.+|...+..+...|. .|+..++++++.+.+.+.|...   ..+    ..+.+.     ..|+||.++..+
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~~~----~~~~~~-----~~D~vi~~vp~~   71 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQA---CEN----NQKVAA-----ASDIIFTSLPNA   71 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCEE---CSS----HHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCee---cCC----HHHHHh-----CCCEEEEECCCH
Confidence            478899999999999888888888 7889988888887777666431   111    333332     279999998665


Q ss_pred             HHHHHHH-------HhhccCCeEEEEec
Q 047713          226 QAMISAF-------ECVHDGWGVAVLVG  246 (329)
Q Consensus       226 ~~~~~~~-------~~l~~~~G~vv~~g  246 (329)
                      ..++..+       ..++++ ..++.+.
T Consensus        72 ~~~~~v~~~~~~l~~~l~~~-~~vv~~~   98 (301)
T 3cky_A           72 GIVETVMNGPGGVLSACKAG-TVIVDMS   98 (301)
T ss_dssp             HHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence            5555444       245554 5555554

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=94.83  E-value=0.12  Score=43.24  Aligned_cols=99  Identities=14%  Similarity=0.089  Sum_probs=66.8

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhh-hc
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADM-TN  212 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~-~~  212 (329)
                      +.......++.+||-.|+| .|..+..+++.. +. +|++++.+++..+.+++.... ..+.. +    .    .++ ..
T Consensus        25 l~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~-d----~----~~~~~~   93 (259)
T 2p35_A           25 LLAQVPLERVLNGYDLGCG-PGNSTELLTDRYGVN-VITGIDSDDDMLEKAADRLPNTNFGKA-D----L----ATWKPA   93 (259)
T ss_dssp             HHTTCCCSCCSSEEEETCT-TTHHHHHHHHHHCTT-SEEEEESCHHHHHHHHHHSTTSEEEEC-C----T----TTCCCS
T ss_pred             HHHhcCCCCCCEEEEecCc-CCHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHhCCCcEEEEC-C----h----hhcCcc
Confidence            4555667888999999887 477778888775 45 899999999998888765221 11111 1    1    111 12


Q ss_pred             CCccEEEEecC------CHHHHHHHHHhhccCCeEEEEec
Q 047713          213 GGVDRSVECTG------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       213 ~~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +.+|+|+....      ....+..+.++|+++ |.++...
T Consensus        94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  132 (259)
T 2p35_A           94 QKADLLYANAVFQWVPDHLAVLSQLMDQLESG-GVLAVQM  132 (259)
T ss_dssp             SCEEEEEEESCGGGSTTHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             CCcCEEEEeCchhhCCCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            37999986542      234567777889998 9888764

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=94.82  E-value=0.059  Score=47.38  Aligned_cols=46  Identities=24%  Similarity=0.419  Sum_probs=38.8

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV  190 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~  190 (329)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++.+..+++|.
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~  189 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGL  189 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTE
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCc
Confidence            58899999999999999999999999 89999887655555556664

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=94.82  E-value=0.26  Score=41.92  Aligned_cols=89  Identities=21%  Similarity=0.274  Sum_probs=58.5

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhcC-CccEEEEecC
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGAS-RIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTNG-GVDRSVECTG  223 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~-~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g  223 (329)
                      +|.|+|+|.+|.+.++.++..|.. .|++.++++++.+.++++|... ...  +    .    .+.. . ..|+||.++.
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~--~----~----~~~~-~~~aDvVilavp   71 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT--S----I----AKVE-DFSPDFVMLSSP   71 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES--C----G----GGGG-GTCCSEEEECSC
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccC--C----H----HHHh-cCCCCEEEEcCC
Confidence            688999999999999988887752 6888999999888888888632 111  1    1    1111 2 4799999996


Q ss_pred             CHHHH---HHHHHhhccCCeEEEEecc
Q 047713          224 SVQAM---ISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       224 ~~~~~---~~~~~~l~~~~G~vv~~g~  247 (329)
                      .....   ......++++ ..++.++.
T Consensus        72 ~~~~~~v~~~l~~~l~~~-~iv~~~~~   97 (281)
T 2g5c_A           72 VRTFREIAKKLSYILSED-ATVTDQGS   97 (281)
T ss_dssp             HHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             HHHHHHHHHHHHhhCCCC-cEEEECCC
Confidence            53322   2222345555 55665543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=94.81  E-value=0.15  Score=47.33  Aligned_cols=83  Identities=17%  Similarity=0.208  Sum_probs=53.8

Q ss_pred             CCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-------HHHHHhcCCcee---eCCCCCCchHHHHHHh
Q 047713          141 KPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-------FNEAKKFGVTEF---VNPKDYDKPVQQVIAD  209 (329)
Q Consensus       141 ~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-------~~~~~~lg~~~~---~~~~~~~~~~~~~~~~  209 (329)
                      .++++.++||+|+ |.+|..++..+...|+++|+.+.++...       .+.+++.|....   .|..+. +++.+.+.+
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~-~~v~~~~~~  300 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDR-ESVRELLGG  300 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCH-HHHHHHHHT
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCH-HHHHHHHHH
Confidence            3578899999986 9999999998877798668888776531       123445565322   233222 224444444


Q ss_pred             hhc-CCccEEEEecCC
Q 047713          210 MTN-GGVDRSVECTGS  224 (329)
Q Consensus       210 ~~~-~~~d~Vid~~g~  224 (329)
                      ... +.+|.||++.|.
T Consensus       301 i~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          301 IGDDVPLSAVFHAAAT  316 (486)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             HHhcCCCcEEEECCcc
Confidence            422 278999999883

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=94.80  E-value=0.18  Score=44.41  Aligned_cols=91  Identities=16%  Similarity=0.131  Sum_probs=62.1

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      .+|.|+|.|.+|...+..++..|. .|++.++++++.+.++++|.....     +  ..+.+.+. ..+.|+||-++.. 
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~~-----~--~~e~~~~a-~~~aDlVilavP~-   78 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVSA-----D--LEATLQRA-AAEDALIVLAVPM-   78 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEES-----C--HHHHHHHH-HHTTCEEEECSCH-
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeeeC-----C--HHHHHHhc-ccCCCEEEEeCCH-
Confidence            578899999999999999998898 899999999999999999874321     1  33333322 1146999999864 


Q ss_pred             HHHHHHHHh---hccCCeEEEEecc
Q 047713          226 QAMISAFEC---VHDGWGVAVLVGV  247 (329)
Q Consensus       226 ~~~~~~~~~---l~~~~G~vv~~g~  247 (329)
                      ......++.   ++++ ..++.++.
T Consensus        79 ~~~~~vl~~l~~~~~~-~iv~Dv~S  102 (341)
T 3ktd_A           79 TAIDSLLDAVHTHAPN-NGFTDVVS  102 (341)
T ss_dssp             HHHHHHHHHHHHHCTT-CCEEECCS
T ss_pred             HHHHHHHHHHHccCCC-CEEEEcCC
Confidence            344433332   3444 55555554

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=94.78  E-value=0.1  Score=48.92  Aligned_cols=83  Identities=14%  Similarity=0.150  Sum_probs=53.2

Q ss_pred             CCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCCh-----------------hhHHHHHhcCCceee---CCCC
Q 047713          141 KPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNP-----------------SRFNEAKKFGVTEFV---NPKD  198 (329)
Q Consensus       141 ~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~-----------------~~~~~~~~lg~~~~~---~~~~  198 (329)
                      .++++.++||+|+ |++|..++..+...|+++++.+ .++.                 +..+.+++.|....+   |..+
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD  326 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence            3567899999976 9999999998877898667776 6652                 122334555653322   3322


Q ss_pred             CCchHHHHHHhhhc-CCccEEEEecCC
Q 047713          199 YDKPVQQVIADMTN-GGVDRSVECTGS  224 (329)
Q Consensus       199 ~~~~~~~~~~~~~~-~~~d~Vid~~g~  224 (329)
                      . +++.+.+.++.. +++|+||++.|.
T Consensus       327 ~-~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          327 A-EAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             H-HHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             H-HHHHHHHHHHHhcCCCcEEEECCcC
Confidence            2 234444444432 279999999883

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=94.78  E-value=0.089  Score=50.33  Aligned_cols=79  Identities=20%  Similarity=0.222  Sum_probs=50.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh---------hhHH----HHHhcCCceeeCCCCCCchHHHHHHh
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP---------SRFN----EAKKFGVTEFVNPKDYDKPVQQVIAD  209 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~---------~~~~----~~~~lg~~~~~~~~~~~~~~~~~~~~  209 (329)
                      .|+++||+|+ +++|.+.+..+...|+ +|+.++.+.         ++.+    .+++.|...+.+..+.. +..+.+.+
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~-~~~~~v~~   84 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVL-DGDKIVET   84 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTT-CHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHH-HHHHHHHH
Confidence            4788999986 9999999999999999 788876543         2222    23344544444444332 13333333


Q ss_pred             hhc--CCccEEEEecCC
Q 047713          210 MTN--GGVDRSVECTGS  224 (329)
Q Consensus       210 ~~~--~~~d~Vid~~g~  224 (329)
                      ...  +.+|+++++.|.
T Consensus        85 ~~~~~G~iDiLVnNAGi  101 (604)
T 2et6_A           85 AVKNFGTVHVIINNAGI  101 (604)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            322  479999999883

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=94.77  E-value=0.049  Score=52.23  Aligned_cols=79  Identities=22%  Similarity=0.216  Sum_probs=46.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC---------ChhhH----HHHHhcCCceeeCCCCCCchHHHHHHh
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL---------NPSRF----NEAKKFGVTEFVNPKDYDKPVQQVIAD  209 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~---------~~~~~----~~~~~lg~~~~~~~~~~~~~~~~~~~~  209 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++         +.++.    +.+++.+.....+..+.. +..+.+++
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~-~~~~~~~~   95 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVI-DGAKVIET   95 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHTTCCEEECCCCGG-GHHHHHC-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHH-HHHHHHHH
Confidence            4789999986 9999999998888999 7887755         33332    233445555555554432 34444444


Q ss_pred             hhcC--CccEEEEecCC
Q 047713          210 MTNG--GVDRSVECTGS  224 (329)
Q Consensus       210 ~~~~--~~d~Vid~~g~  224 (329)
                      ....  ++|++|+++|.
T Consensus        96 ~~~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           96 AIKAFGRVDILVNNAGI  112 (613)
T ss_dssp             ---------CEECCCCC
T ss_pred             HHHHCCCCcEEEECCCC
Confidence            4333  79999999883

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=94.74  E-value=0.18  Score=44.46  Aligned_cols=132  Identities=11%  Similarity=0.098  Sum_probs=78.4

Q ss_pred             eEEEEcCCHHHHH-HHHHHHH-cCCCEEE-EEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          147 SVAIFGLGAVGLA-AAEGARV-SGASRII-GVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       147 ~VlI~Gag~iG~a-ai~la~~-~G~~~vv-~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      +|.|+|+|.+|.. .+..++. -++ .++ +++.++++.+ .++++|...++..      +.+.+.   ...+|+|+-++
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y~d------~~ell~---~~~iDaV~I~t   94 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENC-VVTAIASRDLTRAREMADRFSVPHAFGS------YEEMLA---SDVIDAVYIPL   94 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSE-EEEEEECSSHHHHHHHHHHHTCSEEESS------HHHHHH---CSSCSEEEECS
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcCCCeeeCC------HHHHhc---CCCCCEEEEeC
Confidence            6889999999974 3444444 466 555 4566666654 5678887665432      333332   23799999999


Q ss_pred             CCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccc----cccceEEEeeecCCCCCCCHHHHHHHHHcCCC
Q 047713          223 GSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNL----LNERTLKGTFFGNYKPRSDLPSVVEKYMNKEL  293 (329)
Q Consensus       223 g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~l  293 (329)
                      ....+.+.+..+|..  |+-|++..+-... ......+.    .+++.+.-.+...+  ...++++-+++.+|.+
T Consensus        95 P~~~H~~~~~~al~a--GkhVl~EKPla~~-~~ea~~l~~~a~~~~~~l~v~~~~R~--~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           95 PTSQHIEWSIKAADA--GKHVVCEKPLALK-AGDIDAVIAARDRNKVVVTEAYMITY--SPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSCCCSS-GGGGHHHHHHHHHHTCCEEECCGGGG--SHHHHHHHHHHHTTTT
T ss_pred             CCchhHHHHHHHHhc--CCEEEEeCCcccc-hhhHHHHHHHHHHcCCceeEeeeeec--CHHHHHhhHhhhcCCC
Confidence            877788888888885  6778886543221 11111111    12232322221122  1357777888888866

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=94.72  E-value=0.065  Score=45.71  Aligned_cols=76  Identities=24%  Similarity=0.327  Sum_probs=54.9

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      -.|.+++|.|. +.+|..++.++...|+ .|..+.+..+                   +  +.+.++     .+|+||.+
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t~-------------------~--L~~~~~-----~ADIVI~A  210 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKTK-------------------D--LSLYTR-----QADLIIVA  210 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCS-------------------C--HHHHHT-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCch-------------------h--HHHHhh-----cCCEEEEC
Confidence            47999999997 5589999999999999 7777753211                   1  333332     37999999


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          222 TGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +|.+..+..  +.++++ ..++.++..
T Consensus       211 vg~p~~I~~--~~vk~G-avVIDVgi~  234 (285)
T 3p2o_A          211 AGCVNLLRS--DMVKEG-VIVVDVGIN  234 (285)
T ss_dssp             SSCTTCBCG--GGSCTT-EEEEECCCE
T ss_pred             CCCCCcCCH--HHcCCC-eEEEEeccC
Confidence            987655432  457887 888888753

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=94.71  E-value=0.45  Score=40.57  Aligned_cols=41  Identities=27%  Similarity=0.445  Sum_probs=35.9

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK  187 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~  187 (329)
                      .+|.|+|+|.+|...++.+...|. .|+..+.++++.+.+++
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            579999999999999999999999 89999999988776554

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=94.71  E-value=0.052  Score=46.20  Aligned_cols=95  Identities=16%  Similarity=0.199  Sum_probs=56.0

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          147 SVAIFGL-GAVGLAAAEGARVS--GASRIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~--G~~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      +|||+|+ |.+|..++..+...  |. +|+++++++++.+.+...+...+. |..+    . +.+.+.. .++|+||.++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d----~-~~~~~~~-~~~d~vi~~a   73 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVRQADYGD----E-AALTSAL-QGVEKLLLIS   73 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEEECCTTC----H-HHHHHHT-TTCSEEEECC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEEEcCCCC----H-HHHHHHH-hCCCEEEEeC
Confidence            4899987 99999999988776  87 788888877665544444443322 3222    1 2333333 2589999988


Q ss_pred             CCH-----HHHHHHHHhhccC-CeEEEEeccC
Q 047713          223 GSV-----QAMISAFECVHDG-WGVAVLVGVP  248 (329)
Q Consensus       223 g~~-----~~~~~~~~~l~~~-~G~vv~~g~~  248 (329)
                      +..     ......++.+... -++++.++..
T Consensus        74 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~  105 (286)
T 2zcu_A           74 SSEVGQRAPQHRNVINAAKAAGVKFIAYTSLL  105 (286)
T ss_dssp             --------CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             CCCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            642     1123333333322 1578887653

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=94.70  E-value=0.064  Score=45.75  Aligned_cols=76  Identities=17%  Similarity=0.251  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          143 KKGQSVAIFGLG-AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       143 ~~g~~VlI~Gag-~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      -.|.+++|.|.| .+|..+++++...|+ .|..+.+..                   .+  +.+.++     .+|+||.+
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t-------------------~~--L~~~~~-----~ADIVI~A  211 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRFT-------------------TD--LKSHTT-----KADILIVA  211 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC-------------------SS--HHHHHT-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc-------------------hh--HHHhcc-----cCCEEEEC
Confidence            479999999975 589999999999999 777764321                   11  333332     37999999


Q ss_pred             cCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          222 TGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       222 ~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +|.+..+..  +.++++ ..++.++..
T Consensus       212 vg~p~~I~~--~~vk~G-avVIDvgi~  235 (285)
T 3l07_A          212 VGKPNFITA--DMVKEG-AVVIDVGIN  235 (285)
T ss_dssp             CCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             CCCCCCCCH--HHcCCC-cEEEEeccc
Confidence            987655432  457886 788888753

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=94.70  E-value=0.022  Score=48.48  Aligned_cols=75  Identities=19%  Similarity=0.264  Sum_probs=46.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc--CCccEEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN--GGVDRSVE  220 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~d~Vid  220 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.++++.++.+....+    ..|..+.. ...+.+.+...  +++|++|+
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~~~~-~~~~~~~~~~~~~g~iD~lvn  100 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLREAA-YADGLPGAVAAGLGRLDIVVN  100 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTTSHH-HHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCCCHH-HHHHHHHHHHHhcCCCCEEEE
Confidence            4789999986 9999999998888999 888888765543211000    11222211 12222222222  36999999


Q ss_pred             ecCC
Q 047713          221 CTGS  224 (329)
Q Consensus       221 ~~g~  224 (329)
                      ++|.
T Consensus       101 nAg~  104 (266)
T 3uxy_A          101 NAGV  104 (266)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9883

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=94.67  E-value=0.13  Score=43.73  Aligned_cols=90  Identities=16%  Similarity=0.221  Sum_probs=60.7

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      .+|||+|+|.+|..++..+...|. .|+++++++++.+.+...+...+. |..+    +    .   -.++|+||.+++.
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d----~----~---~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGEE----P----S---LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEESSSSC----C----C---CTTCCEEEECCCC
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEecccc----c----c---cCCCCEEEECCCc
Confidence            579999999999999999988898 899999999888777666654332 2222    1    1   2378999999874


Q ss_pred             H----HHHHHHHHhhcc---CCeEEEEecc
Q 047713          225 V----QAMISAFECVHD---GWGVAVLVGV  247 (329)
Q Consensus       225 ~----~~~~~~~~~l~~---~~G~vv~~g~  247 (329)
                      .    ......++.++.   +-.+++.++.
T Consensus        74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           74 DSGGDPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             BTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             cccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence            2    223334444332   1157777764

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=94.67  E-value=0.14  Score=44.68  Aligned_cols=96  Identities=19%  Similarity=0.135  Sum_probs=63.7

Q ss_pred             eEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhc-CCc--eeeCCCCCCchHHHHHHhhhcCCccEEEEe-
Q 047713          147 SVAIFGLGAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAKKF-GVT--EFVNPKDYDKPVQQVIADMTNGGVDRSVEC-  221 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~~l-g~~--~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~-  221 (329)
                      +||++|+|. |..+..+++.. +. +|++++.+++-.+.+++. +..  .-+.....+  ..+.+++...+.||+||-. 
T Consensus        92 rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~D--a~~~l~~~~~~~fDvIi~D~  167 (317)
T 3gjy_A           92 RITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIRVDD--ARMVAESFTPASRDVIIRDV  167 (317)
T ss_dssp             EEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESC--HHHHHHTCCTTCEEEEEECC
T ss_pred             EEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEEECc--HHHHHhhccCCCCCEEEECC
Confidence            899998763 77788888865 56 899999999999988764 321  001111112  4444544434589998742 


Q ss_pred             cC---------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          222 TG---------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       222 ~g---------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ..         ..+.++.+.+.|+++ |.++....
T Consensus       168 ~~~~~~~~~L~t~efl~~~~r~Lkpg-Gvlv~~~~  201 (317)
T 3gjy_A          168 FAGAITPQNFTTVEFFEHCHRGLAPG-GLYVANCG  201 (317)
T ss_dssp             STTSCCCGGGSBHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCccccchhhhHHHHHHHHHHhcCCC-cEEEEEec
Confidence            21         145688889999998 98876644

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=94.65  E-value=0.33  Score=43.83  Aligned_cols=110  Identities=15%  Similarity=0.153  Sum_probs=67.9

Q ss_pred             hhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-----------cCC--ceeeCCCCC
Q 047713          133 FGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-----------FGV--TEFVNPKDY  199 (329)
Q Consensus       133 ~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-----------lg~--~~~~~~~~~  199 (329)
                      +..++....++++++||=+|+| +|..++++|+..|+.+|++++.+++..+.+++           +|.  ..+- ....
T Consensus       162 i~~il~~l~l~~gd~VLDLGCG-tG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVe-fi~G  239 (438)
T 3uwp_A          162 VAQMIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYT-LERG  239 (438)
T ss_dssp             HHHHHHHHCCCTTCEEEEESCT-TSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEE-EEEC
T ss_pred             HHHHHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeE-EEEC
Confidence            3345677789999999988887 48888899988888679999999865544432           343  2211 1111


Q ss_pred             CchHHH-HHHhhhcCCccEEEEe-c--C--CHHHHHHHHHhhccCCeEEEEeccC
Q 047713          200 DKPVQQ-VIADMTNGGVDRSVEC-T--G--SVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       200 ~~~~~~-~~~~~~~~~~d~Vid~-~--g--~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +  +.+ ...+.. ..+|+||-. .  .  ....+...++.|+++ |+++.....
T Consensus       240 D--~~~lp~~d~~-~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f  290 (438)
T 3uwp_A          240 D--FLSEEWRERI-ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPF  290 (438)
T ss_dssp             C--TTSHHHHHHH-HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCS
T ss_pred             c--ccCCcccccc-CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeecc
Confidence            1  100 111110 248998731 1  1  123455667789998 999988543

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=94.64  E-value=0.14  Score=44.67  Aligned_cols=103  Identities=23%  Similarity=0.342  Sum_probs=64.8

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhc
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      ....+++|++||=.|+|+ |..++.++..++ ..+|++++.++++.+.+++    +|...+... ..+  ... +.. ..
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~-~~D--~~~-~~~-~~  185 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILF-HSS--SLH-IGE-LN  185 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEE-SSC--GGG-GGG-GC
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEE-ECC--hhh-ccc-cc
Confidence            345678899999887753 666777777653 2489999999998877654    454321111 111  111 111 13


Q ss_pred             CCccEEEE---ecCC-------------------------HHHHHHHHHhhccCCeEEEEecc
Q 047713          213 GGVDRSVE---CTGS-------------------------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       213 ~~~d~Vid---~~g~-------------------------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +.+|.|+-   |+|.                         ...+..+.++|+++ |+++....
T Consensus       186 ~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG-G~lv~stc  247 (315)
T 1ixk_A          186 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYSTC  247 (315)
T ss_dssp             CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             ccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            37999874   3331                         25677888899998 99887644

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=94.64  E-value=0.17  Score=45.10  Aligned_cols=94  Identities=14%  Similarity=0.110  Sum_probs=62.0

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC----hhh---------HHHHHhcCCceeeCCCCCCchHHHHHHhh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN----PSR---------FNEAKKFGVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~----~~~---------~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      ++.+|+|.|+|..|.++++++..+|+++|+.++++    .++         ..++++...  .  ....  ++.+.++  
T Consensus       191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~--~--~~~~--~L~eav~--  262 (388)
T 1vl6_A          191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP--E--RLSG--DLETALE--  262 (388)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT--T--CCCS--CHHHHHT--
T ss_pred             CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc--c--Cchh--hHHHHHc--
Confidence            56799999999999999999999999889999987    544         334444321  0  0111  1444443  


Q ss_pred             hcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          211 TNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       211 ~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                         ++|++|-+++..-.-+..++.++++ -.++.+..+.
T Consensus       263 ---~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalSNPt  297 (388)
T 1vl6_A          263 ---GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANPV  297 (388)
T ss_dssp             ---TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSSS
T ss_pred             ---cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcCCCC
Confidence               3799998887322335566667765 6565555433

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=94.63  E-value=0.15  Score=42.76  Aligned_cols=101  Identities=14%  Similarity=0.070  Sum_probs=63.3

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHh-hhcCCcc
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIAD-MTNGGVD  216 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~-~~~~~~d  216 (329)
                      ..++.+||=.|+| .|..++.+|+.....+|++++.+++..+.+++    +|...+ .....+  ..+.... ...+.||
T Consensus        78 ~~~~~~vLDiG~G-~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v-~~~~~d--~~~~~~~~~~~~~fD  153 (249)
T 3g89_A           78 WQGPLRVLDLGTG-AGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGA-RALWGR--AEVLAREAGHREAYA  153 (249)
T ss_dssp             CCSSCEEEEETCT-TTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSE-EEEECC--HHHHTTSTTTTTCEE
T ss_pred             cCCCCEEEEEcCC-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCce-EEEECc--HHHhhcccccCCCce
Confidence            4678899988875 36666777777644499999999998877654    454321 111112  2221111 1124799


Q ss_pred             EEEEecCC--HHHHHHHHHhhccCCeEEEEecc
Q 047713          217 RSVECTGS--VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       217 ~Vid~~g~--~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|+-..-.  ...++.+.++|+++ |+++.+..
T Consensus       154 ~I~s~a~~~~~~ll~~~~~~Lkpg-G~l~~~~g  185 (249)
T 3g89_A          154 RAVARAVAPLCVLSELLLPFLEVG-GAAVAMKG  185 (249)
T ss_dssp             EEEEESSCCHHHHHHHHGGGEEEE-EEEEEEEC
T ss_pred             EEEECCcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence            99854322  34566777889998 99887643

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=94.61  E-value=0.13  Score=42.85  Aligned_cols=102  Identities=16%  Similarity=0.217  Sum_probs=66.3

Q ss_pred             hhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhh--hc
Q 047713          135 ATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADM--TN  212 (329)
Q Consensus       135 ~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~--~~  212 (329)
                      .+.......++.+||-.|+|. |..+..+++. |..+|++++.+++..+.+++.....-+.....+  +    .++  ..
T Consensus        35 ~l~~~~~~~~~~~vLD~GcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d--~----~~~~~~~  106 (253)
T 3g5l_A           35 ELKKMLPDFNQKTVLDLGCGF-GWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKA--I----EDIAIEP  106 (253)
T ss_dssp             HHHTTCCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCCCTTEEEEECC--G----GGCCCCT
T ss_pred             HHHHhhhccCCCEEEEECCCC-CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhccCCeEEEEcc--h----hhCCCCC
Confidence            344555566889999998864 7777777776 444899999999998888765321101011111  1    111  12


Q ss_pred             CCccEEEEecC------CHHHHHHHHHhhccCCeEEEEe
Q 047713          213 GGVDRSVECTG------SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       213 ~~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      +.+|+|+-...      ....+..+.+.|+++ |.++..
T Consensus       107 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~  144 (253)
T 3g5l_A          107 DAYNVVLSSLALHYIASFDDICKKVYINLKSS-GSFIFS  144 (253)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCeEEEEEchhhhhhhhHHHHHHHHHHHcCCC-cEEEEE
Confidence            37999985432      235677888899998 998875

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=94.60  E-value=0.15  Score=41.12  Aligned_cols=96  Identities=15%  Similarity=0.164  Sum_probs=63.1

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc----eeeCCCCCCchHHHHHHhhhcCCccE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT----EFVNPKDYDKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~----~~~~~~~~~~~~~~~~~~~~~~~~d~  217 (329)
                      +.++.+||..|+|. |..+..+++. |..++++++.++...+.+++....    .++.. +    ..+ + ....+.+|+
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~-d----~~~-~-~~~~~~fD~  110 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETM-D----VRK-L-DFPSASFDV  110 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEEC-C----TTS-C-CSCSSCEEE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEc-c----hhc-C-CCCCCcccE
Confidence            36788999999875 7777777776 443899999999998888764321    11111 1    000 0 112237999


Q ss_pred             EEEecC---------------------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          218 SVECTG---------------------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       218 Vid~~g---------------------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      |+....                     ....+..+.++|+++ |+++....
T Consensus       111 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  160 (215)
T 2pxx_A          111 VLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTS  160 (215)
T ss_dssp             EEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             EEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeC
Confidence            985321                     134577788899998 99988764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=94.60  E-value=0.1  Score=45.62  Aligned_cols=75  Identities=16%  Similarity=0.215  Sum_probs=46.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH----HHHHhc-CCc-eee--CCCCCCchHHHHHHhhhc-C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRF----NEAKKF-GVT-EFV--NPKDYDKPVQQVIADMTN-G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~----~~~~~l-g~~-~~~--~~~~~~~~~~~~~~~~~~-~  213 (329)
                      .+.+|||+|+ |.+|..+++.+...|. +|++++++.++.    +.+++. +.. ..+  |..+     .+.+.++.. .
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~~~~~~~~~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSD-----ERALARIFDAH   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTC-----HHHHHHHHHHS
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCC-----HHHHHHHHhcc
Confidence            3568999986 9999999999988898 888887754332    222221 221 122  2222     122333332 3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+||+++|.
T Consensus        78 ~~d~vih~A~~   88 (341)
T 3enk_A           78 PITAAIHFAAL   88 (341)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECccc
Confidence            79999999874

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=94.60  E-value=0.13  Score=44.49  Aligned_cols=98  Identities=14%  Similarity=0.148  Sum_probs=61.7

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-------ceeeCCCCCCchHHHHHHhhhcCCcc
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV-------TEFVNPKDYDKPVQQVIADMTNGGVD  216 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~-------~~~~~~~~~~~~~~~~~~~~~~~~~d  216 (329)
                      ++.+||+.|+|. |..+..+++..+..+|++++.+++..+.+++.-.       ..-+.....+  ..+.+.. ..+.+|
T Consensus        90 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D--~~~~l~~-~~~~fD  165 (296)
T 1inl_A           90 NPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIAN--GAEYVRK-FKNEFD  165 (296)
T ss_dssp             SCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC--HHHHGGG-CSSCEE
T ss_pred             CCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECc--HHHHHhh-CCCCce
Confidence            468999998753 6667777777665699999999998888776310       0001111112  3333322 234799


Q ss_pred             EEEE-ec----C------CHHHHHHHHHhhccCCeEEEEec
Q 047713          217 RSVE-CT----G------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       217 ~Vid-~~----g------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|+- ..    +      ..+.++.+.+.|+++ |.++...
T Consensus       166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  205 (296)
T 1inl_A          166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET  205 (296)
T ss_dssp             EEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             EEEEcCCCcccCchhhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            9873 32    1      135678888999998 9988764

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=94.60  E-value=0.1  Score=44.56  Aligned_cols=84  Identities=17%  Similarity=0.120  Sum_probs=53.8

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ  226 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~  226 (329)
                      +|.|+|+|.+|...+..+.. |. .|+..++++++.+.+.+.|.... +.           .+.. ...|+||.++..+.
T Consensus         3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~~-~~-----------~~~~-~~~D~vi~~v~~~~   67 (289)
T 2cvz_A            3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSEA-VP-----------LERV-AEARVIFTCLPTTR   67 (289)
T ss_dssp             CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCEE-CC-----------GGGG-GGCSEEEECCSSHH
T ss_pred             eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCccc-CH-----------HHHH-hCCCEEEEeCCChH
Confidence            58889999999998887777 98 68888888888777766554321 11           1111 14788888887655


Q ss_pred             HHHHHHH----hhccCCeEEEEec
Q 047713          227 AMISAFE----CVHDGWGVAVLVG  246 (329)
Q Consensus       227 ~~~~~~~----~l~~~~G~vv~~g  246 (329)
                      .....++    .++++ ..++.++
T Consensus        68 ~~~~v~~~l~~~l~~~-~~vv~~s   90 (289)
T 2cvz_A           68 EVYEVAEALYPYLREG-TYWVDAT   90 (289)
T ss_dssp             HHHHHHHHHTTTCCTT-EEEEECS
T ss_pred             HHHHHHHHHHhhCCCC-CEEEECC
Confidence            4444433    34443 4555443

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=94.59  E-value=0.12  Score=42.39  Aligned_cols=98  Identities=17%  Similarity=0.214  Sum_probs=63.2

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee--------CCCCCCchHHHHHHhhhcC
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV--------NPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~--------~~~~~~~~~~~~~~~~~~~  213 (329)
                      ++++.+||-.|+|. |..+..+++. +. +|++++.+++..+.+++......+        .....+  ... + ....+
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d--~~~-~-~~~~~  100 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLELASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVEN--ASS-L-SFHDS  100 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECC--TTS-C-CSCTT
T ss_pred             CCCCCeEEEECCCC-CHHHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEec--ccc-c-CCCCC
Confidence            45789999998874 7777777776 77 899999999988888764322111        000000  000 0 01123


Q ss_pred             CccEEEEecC-----C-H---HHHHHHHHhhccCCeEEEEecc
Q 047713          214 GVDRSVECTG-----S-V---QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       214 ~~d~Vid~~g-----~-~---~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+|+|+-...     . .   ..+..+.+.|+++ |.++....
T Consensus       101 ~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  142 (235)
T 3sm3_A          101 SFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPG-AYLYLVEF  142 (235)
T ss_dssp             CEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCC-eEEEEEEC
Confidence            7999984321     1 2   4677888899998 99888754

>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*

Probab=94.58  E-value=0.045  Score=46.86  Aligned_cols=96  Identities=18%  Similarity=0.214  Sum_probs=59.2

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcC-Ccc
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNG-GVD  216 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d  216 (329)
                      +++|++||=.++| +|..++.+|+. |..+|++++.+++..+.+++    .+....+.....+      .+++... .+|
T Consensus       123 ~~~g~~VlD~~aG-~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D------~~~~~~~~~~D  194 (278)
T 3k6r_A          123 AKPDELVVDMFAG-IGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMD------NRDFPGENIAD  194 (278)
T ss_dssp             CCTTCEEEETTCT-TTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC------TTTCCCCSCEE
T ss_pred             cCCCCEEEEecCc-CcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCc------HHHhccccCCC
Confidence            6789999987654 24455566665 44489999999998887764    3443211111111      1222233 688


Q ss_pred             EEE-Ee-cCCHHHHHHHHHhhccCCeEEEEec
Q 047713          217 RSV-EC-TGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       217 ~Vi-d~-~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .|+ +. ..+.+.++.++++++++ |.+....
T Consensus       195 ~Vi~~~p~~~~~~l~~a~~~lk~g-G~ih~~~  225 (278)
T 3k6r_A          195 RILMGYVVRTHEFIPKALSIAKDG-AIIHYHN  225 (278)
T ss_dssp             EEEECCCSSGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             EEEECCCCcHHHHHHHHHHHcCCC-CEEEEEe
Confidence            665 42 22446788999999997 8776543

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=94.57  E-value=0.052  Score=47.53  Aligned_cols=71  Identities=18%  Similarity=0.232  Sum_probs=44.8

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +|||+|+ |.+|..++..+...|. +|+++++++.+.+.+...+...+ .|..+    . +.+.++.. ++|+||.++|.
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d----~-~~~~~~~~-~~d~vih~a~~   87 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPECRVAEMLD----H-AGLERALR-GLDGVIFSAGY   87 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEEEECCTTC----H-HHHHHHTT-TCSEEEEC---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEEEEecCCC----H-HHHHHHHc-CCCEEEECCcc
Confidence            7999987 9999999998888898 88888887665433332233322 12222    1 23333332 59999999874

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=94.54  E-value=0.066  Score=44.82  Aligned_cols=100  Identities=17%  Similarity=0.149  Sum_probs=66.3

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcCCc
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNGGV  215 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (329)
                      ..+.++.+||-.|+|. |..+..+++..+. +|++++.+++..+.+++    .|...-+.....+  +. .+ ....+.+
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~-~~-~~~~~~f  115 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGS--MD-NL-PFQNEEL  115 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC--TT-SC-SSCTTCE
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECC--hh-hC-CCCCCCE
Confidence            3678899999999874 8889999998877 99999999988777654    3432101000011  10 00 0112379


Q ss_pred             cEEEEe-----cCCHHHHHHHHHhhccCCeEEEEec
Q 047713          216 DRSVEC-----TGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       216 d~Vid~-----~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+|+-.     ......+..+.++|+++ |.++...
T Consensus       116 D~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~  150 (257)
T 3f4k_A          116 DLIWSEGAIYNIGFERGMNEWSKYLKKG-GFIAVSE  150 (257)
T ss_dssp             EEEEEESCSCCCCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             EEEEecChHhhcCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            999632     33345678888899998 9988775

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=94.51  E-value=0.33  Score=42.39  Aligned_cols=87  Identities=15%  Similarity=0.156  Sum_probs=56.5

Q ss_pred             eEEEEcCCHHHHHH-H-HHHHHcCCCEEEEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEec
Q 047713          147 SVAIFGLGAVGLAA-A-EGARVSGASRIIGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECT  222 (329)
Q Consensus       147 ~VlI~Gag~iG~aa-i-~la~~~G~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~  222 (329)
                      +|.|+|+|.+|... + .+.+ .+.+.+.+++.++++.+ ..+++|....+.  +    +.    ++... .+|+|+.++
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~~~~g~~~~~~--~----~~----~~l~~~~~D~V~i~t   70 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENGIGKSVT--S----VE----ELVGDPDVDAVYVST   70 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHHHHTTCSCCBS--C----HH----HHHTCTTCCEEEECS
T ss_pred             eEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHHHHcCCCcccC--C----HH----HHhcCCCCCEEEEeC
Confidence            57889999999876 5 4445 67733445677777664 456677542221  1    32    22333 699999999


Q ss_pred             CCHHHHHHHHHhhccCCeEEEEec
Q 047713          223 GSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       223 g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ....+.+.+..++..  |+-+.+.
T Consensus        71 p~~~h~~~~~~al~~--Gk~v~~e   92 (332)
T 2glx_A           71 TNELHREQTLAAIRA--GKHVLCE   92 (332)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEC
T ss_pred             ChhHhHHHHHHHHHC--CCeEEEe
Confidence            876677788888876  5555554

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=94.48  E-value=0.23  Score=44.08  Aligned_cols=89  Identities=18%  Similarity=0.203  Sum_probs=62.0

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHc-CCCEEE-EEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          146 QSVAIFGLGAVGLAAAEGARVS-GASRII-GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~-G~~~vv-~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      -+|.|+|.|.+|...+..++.. +. .++ +++.++++.+.++++|+. .+  .+    +.+.+.   ...+|+|+.++.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~a~~~g~~-~~--~~----~~~ll~---~~~~D~V~i~tp   74 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNL-EVHGVFDILAEKREAAAQKGLK-IY--ES----YEAVLA---DEKVDAVLIATP   74 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTE-EEEEEECSSHHHHHHHHTTTCC-BC--SC----HHHHHH---CTTCCEEEECSC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHhcCCc-ee--CC----HHHHhc---CCCCCEEEEcCC
Confidence            3688999999998877766655 66 555 457788887777777763 21  11    333332   136999999998


Q ss_pred             CHHHHHHHHHhhccCCeEEEEecc
Q 047713          224 SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       224 ~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ...+.+.+..++..  |+-+++..
T Consensus        75 ~~~h~~~~~~al~a--GkhVl~EK   96 (359)
T 3e18_A           75 NDSHKELAISALEA--GKHVVCEK   96 (359)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEEES
T ss_pred             cHHHHHHHHHHHHC--CCCEEeeC
Confidence            77778888888886  56666654

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=94.46  E-value=0.027  Score=46.79  Aligned_cols=101  Identities=19%  Similarity=0.213  Sum_probs=63.2

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc--eeeCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT--EFVNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      .+++.+||-.|+| .|..+..+++... .+|++++.+++..+.+++....  .-+.....+  +.+.+..+..+.+|+|+
T Consensus        58 ~~~~~~vLDiGcG-tG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~fD~V~  133 (236)
T 1zx0_A           58 SSKGGRVLEVGFG-MAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL--WEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             TTTCEEEEEECCT-TSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESC--HHHHGGGSCTTCEEEEE
T ss_pred             CCCCCeEEEEecc-CCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecC--HHHhhcccCCCceEEEE
Confidence            4678899999876 3677777765433 3899999999988887764311  111111122  33332233334799998


Q ss_pred             E-ecC----CH------HHHHHHHHhhccCCeEEEEecc
Q 047713          220 E-CTG----SV------QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       220 d-~~g----~~------~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      - ...    ..      ..+..+.++|+++ |+++.+..
T Consensus       134 ~d~~~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~~  171 (236)
T 1zx0_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCNL  171 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECCH
T ss_pred             ECCcccchhhhhhhhHHHHHHHHHHhcCCC-eEEEEEec
Confidence            6 222    11      2367788899998 99887643

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=94.42  E-value=0.15  Score=45.12  Aligned_cols=45  Identities=31%  Similarity=0.477  Sum_probs=36.0

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV  190 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~  190 (329)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++ ...+++|+
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~  211 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSD-GVERALGL  211 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCT-THHHHHTC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhHhhcCC
Confidence            58899999999999999999999999 89888876543 22344565

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=94.42  E-value=0.1  Score=45.11  Aligned_cols=68  Identities=18%  Similarity=0.141  Sum_probs=44.8

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .+|||+|+ |.+|..++..+...|. .|+++++++.+.+ ++  +...+. |..      .+.+.++.. ++|+||++++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~~~~~Dl~------~~~~~~~~~-~~d~Vih~a~   71 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYEYRVSDYT------LEDLINQLN-DVDAVVHLAA   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCEEEECCCC------HHHHHHHTT-TCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceEEEEcccc------HHHHHHhhc-CCCEEEEccc
Confidence            58999986 9999999999998898 8888888755444 33  332221 221      233444433 6999999987


Q ss_pred             C
Q 047713          224 S  224 (329)
Q Consensus       224 ~  224 (329)
                      .
T Consensus        72 ~   72 (311)
T 3m2p_A           72 T   72 (311)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=94.42  E-value=0.055  Score=49.80  Aligned_cols=103  Identities=22%  Similarity=0.280  Sum_probs=65.3

Q ss_pred             ccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceeeC-CCCCCchHHHHHHhhhc
Q 047713          139 VAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEFVN-PKDYDKPVQQVIADMTN  212 (329)
Q Consensus       139 ~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~~~-~~~~~~~~~~~~~~~~~  212 (329)
                      ...+++|++||-.|+|+ |..+.+++..++- .+|++++.++.+.+.+++    +|...+.. ..+.. .+   ...+.+
T Consensus       254 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~-~~---~~~~~~  328 (450)
T 2yxl_A          254 VLDPKPGETVVDLAAAP-GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDAR-KA---PEIIGE  328 (450)
T ss_dssp             HHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTT-CC---SSSSCS
T ss_pred             hcCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChh-hc---chhhcc
Confidence            34678899999888765 6677778877642 489999999998876654    46532211 11110 00   000111


Q ss_pred             CCccEEEE---ecCC-------------------------HHHHHHHHHhhccCCeEEEEecc
Q 047713          213 GGVDRSVE---CTGS-------------------------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       213 ~~~d~Vid---~~g~-------------------------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +.||+|+-   |+|.                         ...+..+.+.|+++ |+++....
T Consensus       329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvy~tc  390 (450)
T 2yxl_A          329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG-GRLLYTTC  390 (450)
T ss_dssp             SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE-EEEEEEES
T ss_pred             CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            36999984   4332                         24577888899998 99887654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=94.41  E-value=0.13  Score=46.23  Aligned_cols=83  Identities=23%  Similarity=0.211  Sum_probs=50.6

Q ss_pred             cCC-CCCCeEEEEcC-CHHHHHHHHHHHH-cCCCEEEEEcCChhh----------------HHHHHhcCCcee---eCCC
Q 047713          140 AKP-KKGQSVAIFGL-GAVGLAAAEGARV-SGASRIIGVDLNPSR----------------FNEAKKFGVTEF---VNPK  197 (329)
Q Consensus       140 ~~~-~~g~~VlI~Ga-g~iG~aai~la~~-~G~~~vv~~~~~~~~----------------~~~~~~lg~~~~---~~~~  197 (329)
                      ..+ ..++++||+|+ +++|++++..+.. .|+ +|+.++.+.+.                .+.+++.|....   .|..
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC
Confidence            444 45778889986 9999999887777 899 78777654321                124455664322   2332


Q ss_pred             CCCchHHHHHHhhhc--CCccEEEEecCC
Q 047713          198 DYDKPVQQVIADMTN--GGVDRSVECTGS  224 (329)
Q Consensus       198 ~~~~~~~~~~~~~~~--~~~d~Vid~~g~  224 (329)
                      +. ++..+.+.+...  |++|++++++|.
T Consensus       120 d~-~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SD-EIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             SH-HHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             CH-HHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            22 123333333322  479999999875

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=94.41  E-value=0.084  Score=46.61  Aligned_cols=73  Identities=15%  Similarity=0.135  Sum_probs=46.4

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhc----CCcee-eCCCCCCchHHHHHHhhhcC-Ccc
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKF----GVTEF-VNPKDYDKPVQQVIADMTNG-GVD  216 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~l----g~~~~-~~~~~~~~~~~~~~~~~~~~-~~d  216 (329)
                      +.+|||+|+ |.+|..+++.+...|. +|+++++++++.+. .+.+    +...+ .|..+.     ..+.++..+ ++|
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-----~~~~~~~~~~~~d   82 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ-----NKLLESIREFQPE   82 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCH-----HHHHHHHHHHCCS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEccccCH-----HHHHHHHHhcCCC
Confidence            578999987 9999999998888898 88888876544322 2222    12111 222221     223333333 689


Q ss_pred             EEEEecC
Q 047713          217 RSVECTG  223 (329)
Q Consensus       217 ~Vid~~g  223 (329)
                      +||.++|
T Consensus        83 ~vih~A~   89 (357)
T 1rkx_A           83 IVFHMAA   89 (357)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            9999987

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=94.39  E-value=0.1  Score=45.04  Aligned_cols=35  Identities=17%  Similarity=0.301  Sum_probs=27.4

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS  180 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~  180 (329)
                      +.+|||+|+ |.+|..+++.+...|. +|++++++..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~   37 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGFRRA   37 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEccCCC
Confidence            468999987 9999999998888898 8888876543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=94.38  E-value=0.088  Score=46.24  Aligned_cols=68  Identities=28%  Similarity=0.391  Sum_probs=43.4

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      .++.+|||+|+ |.+|..+++.+...|. .|+++++++.+      .+...+ .|..+.     ..+.++.. ++|+||.
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~------~~~~~~~~Dl~d~-----~~~~~~~~-~~d~vih   83 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRPSG------TGGEEVVGSLEDG-----QALSDAIM-GVSAVLH   83 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSCCS------SCCSEEESCTTCH-----HHHHHHHT-TCSEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCC------CCccEEecCcCCH-----HHHHHHHh-CCCEEEE
Confidence            45779999987 9999999999998998 78888776654      223222 232221     12233222 6899999


Q ss_pred             ecC
Q 047713          221 CTG  223 (329)
Q Consensus       221 ~~g  223 (329)
                      +.+
T Consensus        84 ~A~   86 (347)
T 4id9_A           84 LGA   86 (347)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            876

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=94.37  E-value=0.12  Score=45.31  Aligned_cols=99  Identities=15%  Similarity=0.174  Sum_probs=63.8

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-------eeeCCCCCCchHHHHHHhhhcCCc
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-------EFVNPKDYDKPVQQVIADMTNGGV  215 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-------~~~~~~~~~~~~~~~~~~~~~~~~  215 (329)
                      .++.+||..|+|. |..+..+++..+..+|++++.+++..+.+++.-..       .-+.....+  ..+.+.. ..+.+
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D--~~~~l~~-~~~~f  190 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIED--ASKFLEN-VTNTY  190 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESC--HHHHHHH-CCSCE
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEcc--HHHHHhh-cCCCc
Confidence            3568999998753 66677777765555999999999999888764211       001111112  4333332 23479


Q ss_pred             cEEE-Eec---C------CHHHHHHHHHhhccCCeEEEEec
Q 047713          216 DRSV-ECT---G------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       216 d~Vi-d~~---g------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+|+ |..   +      ..+.++.+.+.|+++ |.++...
T Consensus       191 DvIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  230 (321)
T 2pt6_A          191 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQC  230 (321)
T ss_dssp             EEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             eEEEECCcCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            9987 332   1      146678888999998 9888753

>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}

Probab=94.36  E-value=0.37  Score=42.77  Aligned_cols=90  Identities=13%  Similarity=0.065  Sum_probs=58.7

Q ss_pred             CeEEEEcCCHHHHH-HHHHHHHcCCCEEEEEcCChhhHH-HHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEec
Q 047713          146 QSVAIFGLGAVGLA-AAEGARVSGASRIIGVDLNPSRFN-EAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECT  222 (329)
Q Consensus       146 ~~VlI~Gag~iG~a-ai~la~~~G~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~  222 (329)
                      -+|.|+|.|.++.. .+..++.-+++.+-+++.++++.+ .+++++....+..      +    .++... .+|+|+.++
T Consensus        27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~------~----~~ll~~~~vD~V~I~t   96 (361)
T 3u3x_A           27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIAT------A----EEILEDENIGLIVSAA   96 (361)
T ss_dssp             CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESC------H----HHHHTCTTCCEEEECC
T ss_pred             cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCC------H----HHHhcCCCCCEEEEeC
Confidence            37889998877743 344445677744555666777654 4667774333321      3    333333 799999999


Q ss_pred             CCHHHHHHHHHhhccCCeEEEEecc
Q 047713          223 GSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       223 g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ....+.+.+..+|..  |+-|++..
T Consensus        97 p~~~H~~~~~~al~a--GkhVl~EK  119 (361)
T 3u3x_A           97 VSSERAELAIRAMQH--GKDVLVDK  119 (361)
T ss_dssp             CHHHHHHHHHHHHHT--TCEEEEES
T ss_pred             ChHHHHHHHHHHHHC--CCeEEEeC
Confidence            777778888888885  67677764

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=94.35  E-value=0.085  Score=44.99  Aligned_cols=82  Identities=17%  Similarity=0.259  Sum_probs=57.6

Q ss_pred             hhccCC-CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCC
Q 047713          137 VNVAKP-KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       137 ~~~~~~-~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      ++...+ -.|.+++|.|. +.+|..++.++...|+ .|..+.+...                   +  +.+.+++     
T Consensus       152 L~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~T~-------------------~--L~~~~~~-----  204 (286)
T 4a5o_A          152 LASTGADLYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRFTR-------------------D--LADHVSR-----  204 (286)
T ss_dssp             HHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTTCS-------------------C--HHHHHHT-----
T ss_pred             HHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCCc-------------------C--HHHHhcc-----
Confidence            333333 47999999997 5699999999999999 7877743211                   1  3333333     


Q ss_pred             ccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          215 VDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       215 ~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +|+||.++|.+..+..  +.++++ ..++.++..
T Consensus       205 ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  235 (286)
T 4a5o_A          205 ADLVVVAAGKPGLVKG--EWIKEG-AIVIDVGIN  235 (286)
T ss_dssp             CSEEEECCCCTTCBCG--GGSCTT-CEEEECCSC
T ss_pred             CCEEEECCCCCCCCCH--HHcCCC-eEEEEeccc
Confidence            7999999987655432  457887 888888764

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.34  E-value=0.28  Score=41.33  Aligned_cols=88  Identities=9%  Similarity=0.056  Sum_probs=56.2

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      -+|.|+|+|.+|...+..+...|.+.|...++++++.+.+.+ +|....-+.           .+.. ...|+||.++..
T Consensus        11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~-----------~~~~-~~~Dvvi~av~~   78 (266)
T 3d1l_A           11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDL-----------AEVN-PYAKLYIVSLKD   78 (266)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCG-----------GGSC-SCCSEEEECCCH
T ss_pred             CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCH-----------HHHh-cCCCEEEEecCH
Confidence            368899999999999888877788448888888888776544 465422111           1111 258999999965


Q ss_pred             HHHHHHHHHhhc----cCCeEEEEecc
Q 047713          225 VQAMISAFECVH----DGWGVAVLVGV  247 (329)
Q Consensus       225 ~~~~~~~~~~l~----~~~G~vv~~g~  247 (329)
                      . .....++.+.    ++ ..++.+..
T Consensus        79 ~-~~~~v~~~l~~~~~~~-~ivv~~s~  103 (266)
T 3d1l_A           79 S-AFAELLQGIVEGKREE-ALMVHTAG  103 (266)
T ss_dssp             H-HHHHHHHHHHTTCCTT-CEEEECCT
T ss_pred             H-HHHHHHHHHHhhcCCC-cEEEECCC
Confidence            4 4444444333    43 45555543

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=94.33  E-value=0.19  Score=45.47  Aligned_cols=103  Identities=12%  Similarity=0.104  Sum_probs=69.4

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCc
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGV  215 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (329)
                      +.....+.++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++.+...........  ....+. ...+.+
T Consensus        99 l~~~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~--~~~~l~-~~~~~f  172 (416)
T 4e2x_A           99 FLATELTGPDPFIVEIGCND-GIMLRTIQE-AGV-RHLGFEPSSGVAAKAREKGIRVRTDFFEKA--TADDVR-RTEGPA  172 (416)
T ss_dssp             HHHTTTCSSSCEEEEETCTT-TTTHHHHHH-TTC-EEEEECCCHHHHHHHHTTTCCEECSCCSHH--HHHHHH-HHHCCE
T ss_pred             HHHHhCCCCCCEEEEecCCC-CHHHHHHHH-cCC-cEEEECCCHHHHHHHHHcCCCcceeeechh--hHhhcc-cCCCCE
Confidence            34555677899999998754 666666665 477 899999999999999888765443322111  111221 223579


Q ss_pred             cEEEEecC------CHHHHHHHHHhhccCCeEEEEe
Q 047713          216 DRSVECTG------SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       216 d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      |+|+-...      ....+..+.++|+++ |.++..
T Consensus       173 D~I~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~  207 (416)
T 4e2x_A          173 NVIYAANTLCHIPYVQSVLEGVDALLAPD-GVFVFE  207 (416)
T ss_dssp             EEEEEESCGGGCTTHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEECChHHhcCCHHHHHHHHHHHcCCC-eEEEEE
Confidence            99985432      235678888899998 988875

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=94.32  E-value=0.15  Score=43.93  Aligned_cols=73  Identities=16%  Similarity=0.126  Sum_probs=46.9

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-----hhhHHHHHh---cCCcee-eCCCCCCchHHHHHHhhhcCC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN-----PSRFNEAKK---FGVTEF-VNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~-----~~~~~~~~~---lg~~~~-~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      ..+|||+|+ |.+|..++..+...|. +|++++++     +++.+.+++   .+...+ .|..+    . +.+.+... +
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d----~-~~l~~~~~-~   76 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD----H-QRLVDALK-Q   76 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSC----H-HHHHHHHT-T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCC----H-HHHHHHHh-C
Confidence            357999987 9999999998888898 78888876     444444332   343322 12222    1 22333332 5


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|+||.+++.
T Consensus        77 ~d~vi~~a~~   86 (313)
T 1qyd_A           77 VDVVISALAG   86 (313)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999998874

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=94.31  E-value=0.1  Score=44.89  Aligned_cols=76  Identities=20%  Similarity=0.242  Sum_probs=54.7

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHH--HHHHhhhcCCccEEE
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQ--QVIADMTNGGVDRSV  219 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~--~~~~~~~~~~~d~Vi  219 (329)
                      -.|.+++|.|. +.+|..++.++...|+ .|..+.+....                     +.  +.++     .+|+||
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~~---------------------l~l~~~~~-----~ADIVI  215 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTST---------------------EDMIDYLR-----TADIVI  215 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSCH---------------------HHHHHHHH-----TCSEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCCC---------------------chhhhhhc-----cCCEEE
Confidence            47999999997 5589999999999999 78877542221                     22  2222     379999


Q ss_pred             EecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          220 ECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       220 d~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      .++|.+..+..  +.++++ ..++.++..
T Consensus       216 ~Avg~p~~I~~--~~vk~G-avVIDvgi~  241 (300)
T 4a26_A          216 AAMGQPGYVKG--EWIKEG-AAVVDVGTT  241 (300)
T ss_dssp             ECSCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             ECCCCCCCCcH--HhcCCC-cEEEEEecc
Confidence            99987654433  357887 888888753

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=94.30  E-value=0.025  Score=49.72  Aligned_cols=77  Identities=22%  Similarity=0.132  Sum_probs=45.4

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh----HHHHHhc------CCc-e--eeCCCCCCchHHHHHHhh
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR----FNEAKKF------GVT-E--FVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~----~~~~~~l------g~~-~--~~~~~~~~~~~~~~~~~~  210 (329)
                      ++++||+|+ |++|.+++..+...|+ +|+.+.++.++    .+.++++      +.. .  ..|..+. .++.+.+.+.
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~-~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~   79 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS-KSVAAARERV   79 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH-HHHHHHHHTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCH-HHHHHHHHHH
Confidence            568899986 9999999999988998 45444332221    2223222      121 1  1233322 2344444444


Q ss_pred             hcCCccEEEEecC
Q 047713          211 TNGGVDRSVECTG  223 (329)
Q Consensus       211 ~~~~~d~Vid~~g  223 (329)
                      ..+.+|++|++.|
T Consensus        80 ~~g~iD~lVnnAG   92 (327)
T 1jtv_A           80 TEGRVDVLVCNAG   92 (327)
T ss_dssp             TTSCCSEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence            3347999999887

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.29  E-value=0.54  Score=41.69  Aligned_cols=91  Identities=14%  Similarity=0.211  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      ..+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+...   .  +  ..+.+...  ...|+||-++..
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~---~--s--~~e~~~~a--~~~DvVi~~vp~   91 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAGA---R--S--IEEFCAKL--VKPRVVWLMVPA   91 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBCC---S--S--HHHHHHHS--CSSCEEEECSCG
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEEe---C--C--HHHHHhcC--CCCCEEEEeCCH
Confidence            3579999999999999998888898 89999999999888877765321   1  1  33333321  135888888865


Q ss_pred             HHHHHHHHH----hhccCCeEEEEecc
Q 047713          225 VQAMISAFE----CVHDGWGVAVLVGV  247 (329)
Q Consensus       225 ~~~~~~~~~----~l~~~~G~vv~~g~  247 (329)
                      . .....++    .++++ ..++..+.
T Consensus        92 ~-~v~~vl~~l~~~l~~g-~iiId~st  116 (358)
T 4e21_A           92 A-VVDSMLQRMTPLLAAN-DIVIDGGN  116 (358)
T ss_dssp             G-GHHHHHHHHGGGCCTT-CEEEECSS
T ss_pred             H-HHHHHHHHHHhhCCCC-CEEEeCCC
Confidence            4 3333333    34444 45555543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=94.27  E-value=0.2  Score=43.94  Aligned_cols=74  Identities=18%  Similarity=0.122  Sum_probs=47.9

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh----hhHHHHH---hcCCceee-CCCCCCchHHHHHHhhhcC-C
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP----SRFNEAK---KFGVTEFV-NPKDYDKPVQQVIADMTNG-G  214 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~----~~~~~~~---~lg~~~~~-~~~~~~~~~~~~~~~~~~~-~  214 (329)
                      ..+|||+|+ |.+|..++..+...|. .|+++++++    ++.+.++   ..+...+. |..+     .+.+.++... +
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d-----~~~l~~~~~~~~   83 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE-----QEAMEKILKEHE   83 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTC-----HHHHHHHHHHTT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCC-----HHHHHHHHhhCC
Confidence            358999987 9999999998888897 788887765    4444333   33443322 3322     1223333332 7


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|+||.+.+.
T Consensus        84 ~d~Vi~~a~~   93 (346)
T 3i6i_A           84 IDIVVSTVGG   93 (346)
T ss_dssp             CCEEEECCCG
T ss_pred             CCEEEECCch
Confidence            9999999875

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=94.24  E-value=0.19  Score=42.99  Aligned_cols=73  Identities=23%  Similarity=0.246  Sum_probs=47.7

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcC-CCEEEEEcCChhhH--HHHHhcCCceee-CCCCCCchHHHHHHhhhcCCccEEE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSG-ASRIIGVDLNPSRF--NEAKKFGVTEFV-NPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G-~~~vv~~~~~~~~~--~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      ..+|||+|+ |.+|..++..+...| . +|+++++++++.  +.+...+...+. |..+    . +.+.+... ++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d----~-~~l~~~~~-~~d~vi   77 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQDD----Q-VIMELALN-GAYATF   77 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEEEECCTTC----H-HHHHHHHT-TCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEEEEecCCC----H-HHHHHHHh-cCCEEE
Confidence            468999987 999999999887777 7 888888876553  233344554322 3222    1 22333332 589999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      .+.+.
T Consensus        78 ~~a~~   82 (299)
T 2wm3_A           78 IVTNY   82 (299)
T ss_dssp             ECCCH
T ss_pred             EeCCC
Confidence            99863

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=94.22  E-value=0.19  Score=43.15  Aligned_cols=73  Identities=15%  Similarity=0.181  Sum_probs=46.2

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC------hhhHHHHH---hcCCceee-CCCCCCchHHHHHHhhhcC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN------PSRFNEAK---KFGVTEFV-NPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~------~~~~~~~~---~lg~~~~~-~~~~~~~~~~~~~~~~~~~  213 (329)
                      ..+|||+|+ |.+|..++..+...|. .|++++++      +++.+.++   ..+...+. |..+    . +.+.+... 
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d----~-~~l~~~~~-   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD----H-ASLVEAVK-   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTC----H-HHHHHHHH-
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCC----H-HHHHHHHc-
Confidence            357999987 9999999998888897 78888776      33433333   23443221 2222    1 12333222 


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+||.+++.
T Consensus        77 ~~d~vi~~a~~   87 (308)
T 1qyc_A           77 NVDVVISTVGS   87 (308)
T ss_dssp             TCSEEEECCCG
T ss_pred             CCCEEEECCcc
Confidence            48999999874

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=94.22  E-value=0.42  Score=40.87  Aligned_cols=74  Identities=23%  Similarity=0.290  Sum_probs=52.0

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ  226 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~  226 (329)
                      +|.|+|+|.+|...+..+...|. .|+..++++++.+.+.+.|....   .  +  ..+.+.     ..|+||.++..+.
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~---~--~--~~~~~~-----~~Dvvi~~vp~~~   68 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQVV---S--S--PADVAE-----KADRIITMLPTSI   68 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCEEC---S--S--HHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeec---C--C--HHHHHh-----cCCEEEEeCCCHH
Confidence            47888999999999988888888 78889898888888777664321   1  1  222222     2688888886555


Q ss_pred             HHHHHHH
Q 047713          227 AMISAFE  233 (329)
Q Consensus       227 ~~~~~~~  233 (329)
                      .....+.
T Consensus        69 ~~~~v~~   75 (296)
T 2gf2_A           69 NAIEAYS   75 (296)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            5555544

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=94.22  E-value=0.087  Score=44.91  Aligned_cols=93  Identities=16%  Similarity=0.269  Sum_probs=56.6

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +.+|||+|+|.+|..++..+...|. .|+++++++++.    .-+...+ .|..+.+     .+.++..+.+|+||++++
T Consensus         3 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----~~~~~~~~~Dl~d~~-----~~~~~~~~~~d~vih~a~   72 (286)
T 3gpi_A            3 LSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQPM----PAGVQTLIADVTRPD-----TLASIVHLRPEILVYCVA   72 (286)
T ss_dssp             CCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTSCC----CTTCCEEECCTTCGG-----GCTTGGGGCCSEEEECHH
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcccc----ccCCceEEccCCChH-----HHHHhhcCCCCEEEEeCC
Confidence            4579999999999999999988898 788888776542    1122222 2222211     223333335999999986


Q ss_pred             CHH------------HHHHHHHhhccC-CeEEEEecc
Q 047713          224 SVQ------------AMISAFECVHDG-WGVAVLVGV  247 (329)
Q Consensus       224 ~~~------------~~~~~~~~l~~~-~G~vv~~g~  247 (329)
                      ...            .....++.+... -++++.++.
T Consensus        73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS  109 (286)
T 3gpi_A           73 ASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS  109 (286)
T ss_dssp             HHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence            321            133444555433 147887764

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=94.21  E-value=0.18  Score=45.78  Aligned_cols=84  Identities=23%  Similarity=0.199  Sum_probs=49.8

Q ss_pred             ccCCCCCCeEEEEcC-CHHHHH--HHHHHHHcCCCEEEEEcCChh---------------h-HHHHHhcCCcee---eCC
Q 047713          139 VAKPKKGQSVAIFGL-GAVGLA--AAEGARVSGASRIIGVDLNPS---------------R-FNEAKKFGVTEF---VNP  196 (329)
Q Consensus       139 ~~~~~~g~~VlI~Ga-g~iG~a--ai~la~~~G~~~vv~~~~~~~---------------~-~~~~~~lg~~~~---~~~  196 (329)
                      ...+..|+++||+|+ +++|++  .+..+...|+ +|+.+..+..               . .+.+++.|....   .|.
T Consensus        54 ~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv  132 (418)
T 4eue_A           54 AIGFRGPKKVLIVGASSGFGLATRISVAFGGPEA-HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDA  132 (418)
T ss_dssp             SCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCC-EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             cCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCC-EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeC
Confidence            344577999999986 999998  4444445598 7877766432               1 223455564322   233


Q ss_pred             CCCCchHHHHHHhhhc--CCccEEEEecCC
Q 047713          197 KDYDKPVQQVIADMTN--GGVDRSVECTGS  224 (329)
Q Consensus       197 ~~~~~~~~~~~~~~~~--~~~d~Vid~~g~  224 (329)
                      .+. ++..+.+.++..  +++|++++++|.
T Consensus       133 td~-~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          133 FSN-ETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             TCH-HHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CCH-HHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            322 123333333332  479999998875

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=94.13  E-value=0.075  Score=43.65  Aligned_cols=102  Identities=18%  Similarity=0.188  Sum_probs=62.8

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCC--c--eeeCCCCCCchHHHHHHhhhc
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKFGV--T--EFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~lg~--~--~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      ....++++++||-.|+|. |..+..+++..|. .+|++++.+++..+.+++.-.  .  ..+..+-.+  .. .. ....
T Consensus        67 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~--~~-~~-~~~~  141 (227)
T 1g8a_A           67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATK--PE-EY-RALV  141 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTC--GG-GG-TTTC
T ss_pred             HhcCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCC--cc-hh-hccc
Confidence            344578899999998875 8888888887642 389999999976655443211  1  111111000  00 00 0112


Q ss_pred             CCccEEEEecCCH----HHHHHHHHhhccCCeEEEEe
Q 047713          213 GGVDRSVECTGSV----QAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       213 ~~~d~Vid~~g~~----~~~~~~~~~l~~~~G~vv~~  245 (329)
                      +.+|+|+-....+    ..+..+.+.|+++ |.++..
T Consensus       142 ~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  177 (227)
T 1g8a_A          142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCceEEEECCCCHhHHHHHHHHHHHhcCCC-CEEEEE
Confidence            3799998554332    2277788899998 998877

>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*

Probab=94.10  E-value=0.41  Score=39.11  Aligned_cols=98  Identities=13%  Similarity=0.141  Sum_probs=63.6

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh-cCCccEE
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT-NGGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~-~~~~d~V  218 (329)
                      ++++||=+|+|. |..++.+|+......|++++.+++..+.+++    .+...+- ....+  ..+.+.... .+.+|.|
T Consensus        34 ~~~~vLDiGcG~-G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~-~~~~D--a~~~l~~~~~~~~~d~v  109 (218)
T 3dxy_A           34 EAPVTLEIGFGM-GASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLR-VMCHD--AVEVLHKMIPDNSLRMV  109 (218)
T ss_dssp             CCCEEEEESCTT-CHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEE-EECSC--HHHHHHHHSCTTCEEEE
T ss_pred             CCCeEEEEeeeC-hHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEE-EEECC--HHHHHHHHcCCCChheE
Confidence            567888888763 7788888887644489999999987766543    4443221 11222  444444323 3478988


Q ss_pred             EEecCC--------------HHHHHHHHHhhccCCeEEEEec
Q 047713          219 VECTGS--------------VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       219 id~~g~--------------~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +-....              +..+..+.+.|+++ |.++...
T Consensus       110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpG-G~l~i~t  150 (218)
T 3dxy_A          110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLG-GVFHMAT  150 (218)
T ss_dssp             EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCC-cEEEEEe
Confidence            754221              14778888999998 9887764

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=94.09  E-value=0.52  Score=41.41  Aligned_cols=74  Identities=24%  Similarity=0.257  Sum_probs=51.6

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSR-FNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +.+|.|+|.|.+|.+.+..++..|. .|++.++++++ .+.+++.|.... +       ....+.     ..|+|+-++.
T Consensus        16 ~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~~~~~~~~~a~~~G~~~~-~-------~~e~~~-----~aDvVilavp   81 (338)
T 1np3_A           16 GKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLRSGSATVAKAEAHGLKVA-D-------VKTAVA-----AADVVMILTP   81 (338)
T ss_dssp             TSCEEEECCSHHHHHHHHHHHHTTC-CEEEECCTTCHHHHHHHHTTCEEE-C-------HHHHHH-----TCSEEEECSC
T ss_pred             CCEEEEECchHHHHHHHHHHHHCcC-EEEEEECChHHHHHHHHHCCCEEc-c-------HHHHHh-----cCCEEEEeCC
Confidence            4579999999999999999988898 67777777655 677777886421 1       322222     3799999985


Q ss_pred             CHHHHHHHHH
Q 047713          224 SVQAMISAFE  233 (329)
Q Consensus       224 ~~~~~~~~~~  233 (329)
                      . ......++
T Consensus        82 ~-~~~~~v~~   90 (338)
T 1np3_A           82 D-EFQGRLYK   90 (338)
T ss_dssp             H-HHHHHHHH
T ss_pred             c-HHHHHHHH
Confidence            4 33344443

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=94.08  E-value=0.087  Score=44.68  Aligned_cols=81  Identities=16%  Similarity=0.125  Sum_probs=57.7

Q ss_pred             hhccCCCCCCeEEEEcCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCc
Q 047713          137 VNVAKPKKGQSVAIFGLG-AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGV  215 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag-~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (329)
                      ++... -.|.+++|.|.| .+|..++.++...|+ .|..+.+..                   .+  +.+.+++     +
T Consensus       143 L~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~t-------------------~~--L~~~~~~-----A  194 (276)
T 3ngx_A          143 MDYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSKT-------------------KD--IGSMTRS-----S  194 (276)
T ss_dssp             HHHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC-------------------SC--HHHHHHH-----S
T ss_pred             HHHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCCc-------------------cc--HHHhhcc-----C
Confidence            34444 679999999975 689999999999999 787775321                   11  4444443     7


Q ss_pred             cEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          216 DRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       216 d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      |+||.++|.+..+..  +.++++ ..++.++..
T Consensus       195 DIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  224 (276)
T 3ngx_A          195 KIVVVAVGRPGFLNR--EMVTPG-SVVIDVGIN  224 (276)
T ss_dssp             SEEEECSSCTTCBCG--GGCCTT-CEEEECCCE
T ss_pred             CEEEECCCCCccccH--hhccCC-cEEEEeccC
Confidence            999999987654433  347886 788888753

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=94.08  E-value=0.15  Score=45.15  Aligned_cols=35  Identities=26%  Similarity=0.250  Sum_probs=27.5

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR  181 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~  181 (329)
                      .+|||+|+ |.+|..++..+...|. +|+++++++++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   37 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASS   37 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence            57999986 9999999998888898 89888876543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.06  E-value=0.12  Score=42.76  Aligned_cols=72  Identities=19%  Similarity=0.219  Sum_probs=45.0

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhh-cCCccEEEEec
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMT-NGGVDRSVECT  222 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~d~Vid~~  222 (329)
                      ++++||+|+ |.+|.+++..+...|+ +|+.++++++ .   +++ .....|..+. +++.+.+++.. .+++|++|++.
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~-~---~~~-~~~~~D~~~~-~~~~~~~~~~~~~~~~d~li~~a   74 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRRE-G---EDL-IYVEGDVTRE-EDVRRAVARAQEEAPLFAVVSAA   74 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCC-S---SSS-EEEECCTTCH-HHHHHHHHHHHHHSCEEEEEECC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCcc-c---cce-EEEeCCCCCH-HHHHHHHHHHHhhCCceEEEEcc
Confidence            578999986 9999999998888898 7888877654 1   111 0112233322 12333333331 13789999988


Q ss_pred             C
Q 047713          223 G  223 (329)
Q Consensus       223 g  223 (329)
                      |
T Consensus        75 g   75 (242)
T 1uay_A           75 G   75 (242)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}

Probab=94.05  E-value=0.089  Score=40.90  Aligned_cols=97  Identities=13%  Similarity=0.177  Sum_probs=65.8

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eeeCCCCCCchHHHHHHhhhcCCc
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EFVNPKDYDKPVQQVIADMTNGGV  215 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~  215 (329)
                      .....+.++.+||-.|+|. |..+..+++.. . +|++++.+++..+.+++.... ..+..     +     .....+.+
T Consensus        10 ~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~v~~~~~-----d-----~~~~~~~~   76 (170)
T 3i9f_A           10 LPNIFEGKKGVIVDYGCGN-GFYCKYLLEFA-T-KLYCIDINVIALKEVKEKFDSVITLSD-----P-----KEIPDNSV   76 (170)
T ss_dssp             HHHHHSSCCEEEEEETCTT-CTTHHHHHTTE-E-EEEEECSCHHHHHHHHHHCTTSEEESS-----G-----GGSCTTCE
T ss_pred             HHhcCcCCCCeEEEECCCC-CHHHHHHHhhc-C-eEEEEeCCHHHHHHHHHhCCCcEEEeC-----C-----CCCCCCce
Confidence            3444567888999998764 77777777765 3 899999999988888775211 11111     1     22223479


Q ss_pred             cEEEEecCC------HHHHHHHHHhhccCCeEEEEecc
Q 047713          216 DRSVECTGS------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       216 d~Vid~~g~------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      |+|+-....      ...+..+.+.|+++ |.++....
T Consensus        77 D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  113 (170)
T 3i9f_A           77 DFILFANSFHDMDDKQHVISEVKRILKDD-GRVIIIDW  113 (170)
T ss_dssp             EEEEEESCSTTCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEEEEccchhcccCHHHHHHHHHHhcCCC-CEEEEEEc
Confidence            999854322      34578888999998 99988754

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=94.04  E-value=0.3  Score=44.80  Aligned_cols=102  Identities=19%  Similarity=0.261  Sum_probs=64.3

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhhcCC
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      ..+++|++||=.|+|+ |..++++|..++ ...|++++.++++.+.++    ++|...+... ..+  ..+ +.....+.
T Consensus       101 L~~~~g~~VLDlcaGp-Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~-~~D--a~~-l~~~~~~~  175 (456)
T 3m4x_A          101 AAAKPGEKVLDLCAAP-GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVT-NHA--PAE-LVPHFSGF  175 (456)
T ss_dssp             HCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEE-CCC--HHH-HHHHHTTC
T ss_pred             cCCCCCCEEEEECCCc-CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEE-eCC--HHH-hhhhcccc
Confidence            4578899998876643 445556665543 348999999999887664    4666533221 122  222 22222357


Q ss_pred             ccEEEE---ecCCH-------------------------HHHHHHHHhhccCCeEEEEecc
Q 047713          215 VDRSVE---CTGSV-------------------------QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       215 ~d~Vid---~~g~~-------------------------~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ||.|+-   |+|..                         ..+..++++|+++ |+++....
T Consensus       176 FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTC  235 (456)
T 3m4x_A          176 FDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNK-GQLIYSTC  235 (456)
T ss_dssp             EEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEE-EEEEEEES
T ss_pred             CCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            999874   44422                         4577888899998 99887554

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=94.04  E-value=0.13  Score=42.44  Aligned_cols=98  Identities=18%  Similarity=0.234  Sum_probs=63.1

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      +.++.+||-.|+|. |..+..+++. |. +|++++.+++..+.+++.....-+.....+  ..+ + ....+.+|+|+..
T Consensus        51 ~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d--~~~-~-~~~~~~fD~v~~~  123 (242)
T 3l8d_A           51 VKKEAEVLDVGCGD-GYGTYKLSRT-GY-KAVGVDISEVMIQKGKERGEGPDLSFIKGD--LSS-L-PFENEQFEAIMAI  123 (242)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHTTTCBTTEEEEECB--TTB-C-SSCTTCEEEEEEE
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHhhcccCCceEEEcc--hhc-C-CCCCCCccEEEEc
Confidence            45788999998763 6677777776 77 899999999999988876321101000000  000 0 1112379999854


Q ss_pred             cCC------HHHHHHHHHhhccCCeEEEEecc
Q 047713          222 TGS------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       222 ~g~------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ...      ...+..+.++|+++ |.++....
T Consensus       124 ~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~  154 (242)
T 3l8d_A          124 NSLEWTEEPLRALNEIKRVLKSD-GYACIAIL  154 (242)
T ss_dssp             SCTTSSSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ChHhhccCHHHHHHHHHHHhCCC-eEEEEEEc
Confidence            321      25678888899998 98887753

>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*

Probab=94.02  E-value=0.29  Score=45.03  Aligned_cols=102  Identities=18%  Similarity=0.259  Sum_probs=65.3

Q ss_pred             ccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcC
Q 047713          139 VAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       139 ~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  213 (329)
                      ...+++|++||=.|+|+ |..++++|..++ ...|++++.++++.+.+++    +|.. +. ....+  ..+ +.....+
T Consensus        96 ~L~~~~g~~VLDlgaGp-G~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~-~~~~D--a~~-l~~~~~~  169 (464)
T 3m6w_A           96 LLDPKPGERVLDLAAAP-GGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LA-VTQAP--PRA-LAEAFGT  169 (464)
T ss_dssp             HHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CE-EECSC--HHH-HHHHHCS
T ss_pred             hcCcCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EE-EEECC--HHH-hhhhccc
Confidence            34678899998877653 556667776654 2489999999998877653    5665 22 22222  322 2222245


Q ss_pred             CccEEEE---ecCC-------------------------HHHHHHHHHhhccCCeEEEEecc
Q 047713          214 GVDRSVE---CTGS-------------------------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       214 ~~d~Vid---~~g~-------------------------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .||.|+-   |+|.                         ...+..++++|+++ |+++....
T Consensus       170 ~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvysTC  230 (464)
T 3m6w_A          170 YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPG-GVLVYSTC  230 (464)
T ss_dssp             CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEE-EEEEEEES
T ss_pred             cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEec
Confidence            7999983   3321                         34567788899998 99887543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.01  E-value=0.33  Score=41.44  Aligned_cols=75  Identities=19%  Similarity=0.273  Sum_probs=53.0

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      .+|.|+|+ |.+|...+..+...|. .|++.++++++.+.++++|.+.    .+..        +.. ...|+||.++..
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~----~~~~--------~~~-~~aDvVi~av~~   77 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGMGIPL----TDGD--------GWI-DEADVVVLALPD   77 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHTTCCC----CCSS--------GGG-GTCSEEEECSCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhcCCCc----CCHH--------HHh-cCCCEEEEcCCc
Confidence            37899999 9999999998888898 8999999988888877776432    1111        111 247999999954


Q ss_pred             HHHHHHHHHhh
Q 047713          225 VQAMISAFECV  235 (329)
Q Consensus       225 ~~~~~~~~~~l  235 (329)
                       ..+...++-+
T Consensus        78 -~~~~~v~~~l   87 (286)
T 3c24_A           78 -NIIEKVAEDI   87 (286)
T ss_dssp             -HHHHHHHHHH
T ss_pred             -hHHHHHHHHH
Confidence             3445554433

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=94.00  E-value=0.43  Score=42.91  Aligned_cols=97  Identities=16%  Similarity=0.157  Sum_probs=62.3

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcCCccE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~  217 (329)
                      +++|++||=.|+| +|..++.+|+ .|+ .|++++.+++..+.+++    .|...-+.  ..+  ..+.+....+ .+|+
T Consensus       212 ~~~g~~VLDlg~G-tG~~sl~~a~-~ga-~V~avDis~~al~~a~~n~~~ng~~~~~~--~~D--~~~~l~~~~~-~fD~  283 (393)
T 4dmg_A          212 VRPGERVLDVYSY-VGGFALRAAR-KGA-YALAVDKDLEALGVLDQAALRLGLRVDIR--HGE--ALPTLRGLEG-PFHH  283 (393)
T ss_dssp             CCTTCEEEEESCT-TTHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHHTCCCEEE--ESC--HHHHHHTCCC-CEEE
T ss_pred             hcCCCeEEEcccc-hhHHHHHHHH-cCC-eEEEEECCHHHHHHHHHHHHHhCCCCcEE--Ecc--HHHHHHHhcC-CCCE
Confidence            3469999988764 2555555555 378 59999999998887654    34432121  222  5454544433 4999


Q ss_pred             EEEecCC---------------HHHHHHHHHhhccCCeEEEEecc
Q 047713          218 SVECTGS---------------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       218 Vid~~g~---------------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      |+-.-..               ...+..+.++|+++ |.++.+..
T Consensus       284 Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpG-G~Lv~~s~  327 (393)
T 4dmg_A          284 VLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEE-GFLWLSSC  327 (393)
T ss_dssp             EEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             EEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence            8742221               25677888899998 99987765

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=93.99  E-value=0.069  Score=45.03  Aligned_cols=103  Identities=16%  Similarity=0.194  Sum_probs=62.7

Q ss_pred             ccCCC-CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcC
Q 047713          139 VAKPK-KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       139 ~~~~~-~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  213 (329)
                      ...++ ++++||=.|+|. |..++.+++.... +|++++.+++..+.+++    .+...-+.....+  +.+....+..+
T Consensus        43 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D--~~~~~~~~~~~  118 (259)
T 3lpm_A           43 FSYLPIRKGKIIDLCSGN-GIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYD--LKKITDLIPKE  118 (259)
T ss_dssp             HCCCCSSCCEEEETTCTT-THHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSC--GGGGGGTSCTT
T ss_pred             HhcCCCCCCEEEEcCCch-hHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECc--HHHhhhhhccC
Confidence            34566 788998887753 6666677766555 89999999988877654    3432101111111  21111112234


Q ss_pred             CccEEEEec--------C------------------CHHHHHHHHHhhccCCeEEEEec
Q 047713          214 GVDRSVECT--------G------------------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       214 ~~d~Vid~~--------g------------------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .+|+|+-.-        +                  ....+..+.++|+++ |+++.+-
T Consensus       119 ~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  176 (259)
T 3lpm_A          119 RADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQG-GKANFVH  176 (259)
T ss_dssp             CEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCC-cEEEEEE
Confidence            799998621        0                  023667888899998 9998864

>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}

Probab=93.99  E-value=0.36  Score=40.61  Aligned_cols=105  Identities=12%  Similarity=0.040  Sum_probs=62.0

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-------Cc---eeeCCCCCCchHHHHHHh
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG-------VT---EFVNPKDYDKPVQQVIAD  209 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg-------~~---~~~~~~~~~~~~~~~~~~  209 (329)
                      ..+.++.+||-.|+|. |..++.+++.....+|++++.+++..+.+++.-       ..   .++..+-.+ .......+
T Consensus        32 ~~~~~~~~VLDlG~G~-G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~-~~~~~~~~  109 (260)
T 2ozv_A           32 VADDRACRIADLGAGA-GAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTL-RAKARVEA  109 (260)
T ss_dssp             CCCCSCEEEEECCSSS-SHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTC-CHHHHHHT
T ss_pred             hcccCCCEEEEeCChH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHH-Hhhhhhhh
Confidence            4456788888887653 566666777653338999999999888877532       21   111111111 01111111


Q ss_pred             hh-cCCccEEEEec------------------------CCHHHHHHHHHhhccCCeEEEEecc
Q 047713          210 MT-NGGVDRSVECT------------------------GSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       210 ~~-~~~~d~Vid~~------------------------g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .. .+.||+|+-.-                        .....+..+.++|+++ |+++.+-.
T Consensus       110 ~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  171 (260)
T 2ozv_A          110 GLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSG-GQLSLISR  171 (260)
T ss_dssp             TCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             ccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCC-CEEEEEEc
Confidence            12 33799988531                        0124567778899998 99887643

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=93.97  E-value=0.13  Score=44.84  Aligned_cols=99  Identities=17%  Similarity=0.109  Sum_probs=63.2

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--------ceeeCCCCCCchHHHHHHhhhcCC
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV--------TEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      .++.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-.        +.-+.....+  ..+.+.. ..+.
T Consensus        76 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D--~~~~l~~-~~~~  151 (314)
T 1uir_A           76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDD--ARAYLER-TEER  151 (314)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESC--HHHHHHH-CCCC
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEch--HHHHHHh-cCCC
Confidence            4568999998753 6667777776555599999999998887765310        0001111122  3333333 2347


Q ss_pred             ccEEEEec-------C------CHHHHHHHHHhhccCCeEEEEec
Q 047713          215 VDRSVECT-------G------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       215 ~d~Vid~~-------g------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|+|+-..       +      ..+.++.+.+.|+++ |.++...
T Consensus       152 fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  195 (314)
T 1uir_A          152 YDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQT  195 (314)
T ss_dssp             EEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             ccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCC-cEEEEEc
Confidence            99987332       1      245688889999998 9888763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	329
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	6e-53
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	6e-47
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-44
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-42
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	2e-42
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	3e-36
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	3e-35
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	9e-23
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	1e-21
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	2e-21
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	6e-19
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	7e-19
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	3e-18
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	2e-17
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	2e-13
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	3e-13
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	8e-13
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-11
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	1e-11
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	1e-09
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	2e-07
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	5e-07
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	1e-06
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	1e-05
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	8e-05
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	1e-04
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	6e-04
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	6e-04
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	0.003
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	0.003
d1bg6a2	184	c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvalin	0.003

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  170 bits (430), Expect = 6e-53
 Identities = 76/176 (43%), Positives = 106/176 (60%)

Query: 116 AAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGV 175
           AAP +KVC++ CG STG+GA V   K K G +  +FGLG VGL+   G + +GASRIIG+
Sbjct: 1   AAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGI 60

Query: 176 DLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECV 235
           DLN  +F +A   G TE ++PKD  KP+ +V+++MT   V  + E  G ++ MI A    
Sbjct: 61  DLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASC 120

Query: 236 HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNK 291
           H  +G +V+VGVP         PM L   RT KG  FG  K R D+P +V +++ K
Sbjct: 121 HMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  154 bits (390), Expect = 6e-47
 Identities = 78/176 (44%), Positives = 118/176 (67%), Gaps = 2/176 (1%)

Query: 117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVD 176
           APL+  C++ CG +TG+GA VN AK   G + A+FGLG VG +A  G + +GASRIIGV 
Sbjct: 1   APLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVG 59

Query: 177 LNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVH 236
            +  +F +A + G TE +NPKDYDKP+ +VI + TNGGVD +VEC G ++ M++A +  +
Sbjct: 60  THKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTY 119

Query: 237 DGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKE 292
            G GV V++G+ + ++     P+ LL  R+LKG+ FG +K   ++  +V+ YM K+
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKK 174

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  148 bits (373), Expect = 2e-44
 Identities = 75/176 (42%), Positives = 116/176 (65%), Gaps = 2/176 (1%)

Query: 117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVD 176
           A L++VC++ CG S+G+GA +N AK   G + A+FGLG VGL+A  G +++GASRII +D
Sbjct: 1   ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID 60

Query: 177 LNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVH 236
           +N  +F +AK  G T+ +NP++ DKPVQ VI ++T GGVD S++C G+ Q + +A +C  
Sbjct: 61  INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120

Query: 237 DGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKE 292
            GWG   +VG     D      ++++  R++ GTFFG +K    +P++V  Y NK+
Sbjct: 121 LGWGSCTVVGAK--VDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKK 174

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  143 bits (360), Expect = 2e-42
 Identities = 95/176 (53%), Positives = 125/176 (71%)

Query: 117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVD 176
           APLDKVC+L CGISTG+GA VN AK + G   A+FGLG VGLA   G +V+GASRIIGVD
Sbjct: 1   APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD 60

Query: 177 LNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVH 236
           +N  +F  AK+FG TE +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H
Sbjct: 61  INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120

Query: 237 DGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKE 292
            GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K+
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  142 bits (359), Expect = 2e-42
 Identities = 83/176 (47%), Positives = 121/176 (68%)

Query: 117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVD 176
           +PL+KVC++ CG STG+G+ V VAK  +G + A+FGLG VGL+   G + +GA+RIIGVD
Sbjct: 1   SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60

Query: 177 LNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVH 236
           +N  +F +AK+ G TE VNP+DY KP+Q+V+ +M+NGGVD S E  G +  M++A  C  
Sbjct: 61  INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 237 DGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKE 292
           + +GV+V+VGVP        +PM LL+ RT KG  FG +K +  +P +V  +M K+
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  127 bits (318), Expect = 3e-36
 Identities = 94/176 (53%), Positives = 124/176 (70%), Gaps = 1/176 (0%)

Query: 117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVD 176
           APLD VC+L CG+STGFGA VN AK + G + A+FGLGAVGLAA  G   +GA RII VD
Sbjct: 1   APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD 60

Query: 177 LNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVH 236
           LNP +F +AK FG T+FVNP D+ +P+ QV++ MTNGGVD S+EC G+V  M +A E   
Sbjct: 61  LNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120

Query: 237 DGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKE 292
            GWGV+VLVG  +  D   T P+ L+  RT KG+ FG +K +  +P +V+ Y++K+
Sbjct: 121 KGWGVSVLVGWTDLHDVA-TRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  123 bits (310), Expect = 3e-35
 Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 4/176 (2%)

Query: 118 PLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL 177
           P++ +  L CGI TG GA +N  K     S   +G GAVGL+A   A+V GAS II VD+
Sbjct: 2   PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61

Query: 178 NPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHD 237
             SR   AK+ G T  +N K  D      I ++T+GGV+ ++E TGS + +    +    
Sbjct: 62  VESRLELAKQLGATHVINSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDA-LG 118

Query: 238 GWGVAVLVGVPNKDDAFKTHPMNLL-NERTLKGTFFGNYKPRSDLPSVVEKYMNKE 292
             G   +VG P      +    +LL   +T+ G   G+  P+  +P +V  Y   +
Sbjct: 119 ILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 91.9 bits (227), Expect = 9e-23
 Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 1/151 (0%)

Query: 1   MGFDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEES 60
           +           FP + GHE  GIVESVG GVT+ QPG+ V+P+F  +C EC  C S ++
Sbjct: 50  LYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKT 109

Query: 61  NMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLD 120
           N C     N     +++  ++RF+ KG+ +  F+GTSTFS+YTV +   VAKI+P+  LD
Sbjct: 110 NQCVKGWANESP-DVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLD 168

Query: 121 KVCVLSCGISTGFGATVNVAKPKKGQSVAIF 151
           +       + +   A   +   K  ++V   
Sbjct: 169 EFITHRMPLESVNDAIDLMKHGKCIRTVLSL 199

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 88.1 bits (217), Expect = 1e-21
 Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 6/166 (3%)

Query: 118 PLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL 177
           PL+   +++  ++TGF     +A  + G SV + G+GAVGL    GA++ GA RIIGV  
Sbjct: 2   PLENAVMITDMMTTGFHG-AELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 178 NPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHD 237
            P     AK +G T+ +N         QV+      GVDR +   G  + +  A + V  
Sbjct: 61  RPICVEAAKFYGATDILNY-KNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119

Query: 238 GWGVAVLVGVPNKDDAFKTHPMNL---LNERTLKGTFFGNYKPRSD 280
           G G+   +      DA     +     +  +T+KG      + R++
Sbjct: 120 G-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAE 164

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 88.0 bits (217), Expect = 2e-21
 Identities = 59/144 (40%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLL 66
                 FP I GH   GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +
Sbjct: 54  ADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKI 113

Query: 67  RINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLS 126
           R+   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P   +D+    +
Sbjct: 114 RVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHN 172

Query: 127 CGISTGFGATVNVAKPKKGQSVAI 150
                   A   +   K  ++V  
Sbjct: 173 LSFDEINKAFELMHSGKSIRTVVK 196

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 81.4 bits (200), Expect = 6e-19
 Identities = 62/152 (40%), Positives = 81/152 (53%), Gaps = 4/152 (2%)

Query: 1   MGFDKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEES 60
                        P I GHEA GIVES+GEGVT ++PGD V+P+FT +C +C  C   E 
Sbjct: 49  DDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEG 108

Query: 61  NMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLD 120
           N C    ++  RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A  LD
Sbjct: 109 NFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALD 167

Query: 121 KVCVLSCGISTGFGATVNVAKPKKGQSVAIFG 152
               L   +             + G+S+    
Sbjct: 168 ---PLITHVLPFEKINEGFDLLRSGESIRTIL 196

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 81.1 bits (199), Expect = 7e-19
 Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLL 66
             +  LFP + GHE  GIVESVG GVT+ +PGD V+P F  +CK C  C S  +N+C  L
Sbjct: 55  PKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKL 114

Query: 67  RI---NTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVC 123
           R     T    ++ D  SRF+ KG+ IYHF+G S+FS+YTV     +A+++    LD + 
Sbjct: 115 RNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLV 174

Query: 124 VLSCGISTGFGATVNVAKPKKGQSVAI 150
             +    +     +++ K   G+S+  
Sbjct: 175 THALPFES-INDAIDLMKE--GKSIRT 198

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 79.5 bits (195), Expect = 3e-18
 Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 11/152 (7%)

Query: 7   WGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLL 66
                 FP I GHEA G+VES+G GVT ++PGD V+P+F  +C  C  C S  SN C+  
Sbjct: 55  EIIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKN 114

Query: 67  RINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLS 126
            +   +  ++ D  SRF+ +GKPIY+ +GTSTF+EYTV     VAKI+P   ++ +    
Sbjct: 115 DM-GAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTK 173

Query: 127 CGISTGFGATVNVAKPKKGQSVAIFGLGAVGL 158
                       + +  K   +   G G   +
Sbjct: 174 LT----------LDQINKAFELLSSGQGVRSI 195

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 76.5 bits (187), Expect = 2e-17
 Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 5/175 (2%)

Query: 119 LDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178
           LD + +  C  +T + A     +   G++V I G G +GL     AR  GA  +I +  +
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 179 PSRFNEAKKFGVTEFVNPKDY--DKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVH 236
           P+R   A++ G    +N ++   ++  + ++      G D  +E TG  +A++   E + 
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 237 DGWGVAVLVGV--PNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYM 289
            G G   + GV  P     FK +   +L   T KG +  +        S+  +  
Sbjct: 123 RG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNY 176

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 65.0 bits (157), Expect = 2e-13
 Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 9/169 (5%)

Query: 119 LDKVCVLSCGISTGFGATVNVAKP-KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL 177
           L ++  L+    T + A    A+    G  VAI G+G +G  A +  +V   + +I +D+
Sbjct: 6   LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV 65

Query: 178 NPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHD 237
              +   A++ G    V+ +    PV+QV+      GV+ +++  GS   +      +  
Sbjct: 66  KEEKLKLAERLGADHVVDAR--RDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGR 123

Query: 238 GWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVE 286
             G  ++VG   +          + +E + +G+  GNY    +L  +V 
Sbjct: 124 M-GRLIIVGYGGEL--RFPTIRVISSEVSFEGSLVGNYV---ELHELVT 166

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 65.3 bits (158), Expect = 3e-13
 Identities = 41/172 (23%), Positives = 66/172 (38%), Gaps = 21/172 (12%)

Query: 119 LDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN 178
           +  +  LS  + TG+      A    G +V + G G VGLAAA  AR+ GA+ +I  DLN
Sbjct: 1   IRDLTCLSDILPTGYHG-AVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLN 59

Query: 179 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTG-------------- 223
           P+R   AK  G          D P+ + IA +     VD +V+  G              
Sbjct: 60  PARLAHAKAQGFEIADLS--LDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHE 117

Query: 224 -SVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLK-GTFFG 273
                + S  +      G   + G+   +D         +   +++ G  + 
Sbjct: 118 APATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWA 168

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 8e-13
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 8/148 (5%)

Query: 125 LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE 184
           LS GI               G  V + G G +G+     A+  GA++++  DL+ +R ++
Sbjct: 12  LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66

Query: 185 AKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAV 243
           AK+ G    +              +   G   + ++ECTG+  ++ +       G G  V
Sbjct: 67  AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLV 125

Query: 244 LVGVPNKDDAFKTHPMNLLNERTLKGTF 271
           LVG+ ++           + E  +KG F
Sbjct: 126 LVGLGSEMTTVPLLHA-AIREVDIKGVF 152

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 60.7 bits (146), Expect = 1e-11
 Identities = 34/172 (19%), Positives = 56/172 (32%), Gaps = 29/172 (16%)

Query: 6   RWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDL 65
                   P + GHE  GI+E++G  VT+LQ GDHV+ +  G C +C  C++     C  
Sbjct: 49  DQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV-LSYGYCGKCTQCNTGNPAYCSE 107

Query: 66  LRINTDRGVMINDGQSRFSIKGK--PIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVC 123
                  G              +     HF   S+F+ Y ++      K+    P D++ 
Sbjct: 108 FFGRNFSGADSEGN-HALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLV 166

Query: 124 VLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGV 175
                                           +  AA +  +      II +
Sbjct: 167 KFYAF-------------------------DEINQAAIDSRKGITLKPIIKI 193

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 60.0 bits (144), Expect = 1e-11
 Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 9/162 (5%)

Query: 115 PAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIG 174
           P   L  V  L C   T +   +   +   G+ V + G+G +G    + A   GA  +  
Sbjct: 2   PQEQLAAVAPLLCAGITTYSP-LRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAF 60

Query: 175 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFEC 234
              + ++   AK  G  E VN ++ D+    +         D  +    +   +      
Sbjct: 61  TT-SEAKREAAKALGADEVVNSRNADEMAAHL------KSFDFILNTVAAPHNLDDFTTL 113

Query: 235 VHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYK 276
           +    G   LVG P            ++  R + G+  G   
Sbjct: 114 LKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIP 154

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 54.2 bits (129), Expect = 1e-09
 Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 11/161 (6%)

Query: 129 ISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF 188
           +S G  A    A  + G +V + G G +GL +   A+  GA  +     +P R   AK  
Sbjct: 12  LSVGVHA-CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTAR-SPRRLEVAKNC 69

Query: 189 GVTEFVNPKDYDKPVQQVIA---DMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV 245
           G    +      +    +I           + +++C+G+ + +           G  +LV
Sbjct: 70  GADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRT-GGTLMLV 128

Query: 246 GVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVE 286
           G+ ++             E  +K  F    +  +D P  +E
Sbjct: 129 GMGSQMVTVPLVNA-CAREIDIKSVF----RYCNDYPIALE 164

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.1 bits (113), Expect = 2e-07
 Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 7/159 (4%)

Query: 118 PLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL 177
           P      L CG  T +   +       G+ V I GLG +G      ++  GA   +    
Sbjct: 2   PSHLAAPLLCGGLTVYSP-LVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISR- 59

Query: 178 NPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHD 237
           +  +  +A K G   ++   +     ++         V  S         M  A      
Sbjct: 60  SSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKA----MK 115

Query: 238 GWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYK 276
             G  V + +P + +     P   L   ++  +  G+ K
Sbjct: 116 VGGRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGSIK 153

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 46.9 bits (110), Expect = 5e-07
 Identities = 26/149 (17%), Positives = 43/149 (28%), Gaps = 22/149 (14%)

Query: 4   DKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMC 63
            +        P + GHEA G V  VG+ V  L+ GD V       C+ C  C   + N+C
Sbjct: 48  GRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLC 107

Query: 64  DLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVC 123
                                               + Y V       K+     + ++ 
Sbjct: 108 P---------------------DLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLV 146

Query: 124 VLSCGISTGFGATVNVAKPKKGQSVAIFG 152
             S  +     A    A+ K   ++ +  
Sbjct: 147 THSFKLEQTVDA-FEAARKKADNTIKVMI 174

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 45.9 bits (107), Expect = 1e-06
 Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 14/172 (8%)

Query: 116 AAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFG-LGAVGLAAAEGARVSGASRIIG 174
           AAPL      +C   T + A V  A     +++ + G  G +G  A + A+    + IIG
Sbjct: 6   AAPL------TCSGITTYRA-VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIG 58

Query: 175 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFEC 234
           VD+       AK+ G    +N    D      I  +T      +V    + +  +S +  
Sbjct: 59  VDVREEAVEAAKRAGADYVINASMQD--PLAEIRRITESKGVDAVIDLNNSEKTLSVYPK 116

Query: 235 VHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVE 286
                G  V+VG+   D  +    +  L+E    G+  GN   +SD   ++ 
Sbjct: 117 ALAKQGKYVMVGLFGADLHYHAPLI-TLSEIQFVGSLVGN---QSDFLGIMR 164

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.9 bits (100), Expect = 1e-05
 Identities = 19/148 (12%), Positives = 43/148 (29%), Gaps = 17/148 (11%)

Query: 6   RWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDH-VLPVFTGECKECPHCHSEESNMCD 64
            WG   +   +     G +V+   +  + L+ G    +      C EC  C ++    C 
Sbjct: 56  HWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCT 115

Query: 65  LLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCV 124
                          +   +        +V    ++ Y   H   V  I     ++ + V
Sbjct: 116 ---------------KFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPV 160

Query: 125 LSCGISTGFGATVNVAKPKKGQSVAIFG 152
              G+   F   +     +   ++  + 
Sbjct: 161 GEAGVHEAFER-MEKGDVRYRFTLVGYD 187

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 40.6 bits (94), Expect = 8e-05
 Identities = 13/123 (10%), Positives = 32/123 (26%), Gaps = 19/123 (15%)

Query: 49  CKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHV- 107
           C  C  C    + +C  +      G         ++               +EY +    
Sbjct: 96  CGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTG------------GQAEYVLVPYA 143

Query: 108 -GCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARV 166
              + K+       +   ++  +     + ++ A    G+    F  G       +  + 
Sbjct: 144 DFNLLKLPDRDKAMEKINIAEVVGVQVIS-LDDAPRGYGE----FDAGVPKKFVIDPHKT 198

Query: 167 SGA 169
             A
Sbjct: 199 FSA 201

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 39.9 bits (92), Expect = 1e-04
 Identities = 28/136 (20%), Positives = 44/136 (32%), Gaps = 16/136 (11%)

Query: 5   KRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMC 63
           +      ++P + GHE  G V +VG+ V    PGD V +      CK C  C     N C
Sbjct: 46  RSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYC 105

Query: 64  DLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPA-APLDKV 122
           D     T      ++                    +S+  V H   V +I  A   + + 
Sbjct: 106 DH-MTGTYNSPTPDEP-------------GHTLGGYSQQIVVHERYVLRIRVADIEMIRA 151

Query: 123 CVLSCGISTGFGATVN 138
             ++          V 
Sbjct: 152 DQINEAYERMLRGDVK 167

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 38.1 bits (87), Expect = 6e-04
 Identities = 26/177 (14%), Positives = 56/177 (31%), Gaps = 9/177 (5%)

Query: 125 LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE 184
                 T + +   V +   G+ V I         AA        +RI     + ++   
Sbjct: 6   FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM 65

Query: 185 AKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL 244
             + GV    + +  D      I ++T+G     V  + + +A+    + +  G G  + 
Sbjct: 66  LSRLGVEYVGDSRSVD--FADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPG-GRFIE 122

Query: 245 VGVPNKDDAFKTHPMNLLNERTLKGTFFGNY------KPRSDLPSVVEKYMNKELEV 295
           +G  +           L    +               + R  L  +++   + +LEV
Sbjct: 123 LGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEV 179

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 38.1 bits (87), Expect = 6e-04
 Identities = 17/151 (11%), Positives = 41/151 (27%), Gaps = 2/151 (1%)

Query: 125 LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE 184
                 T +       + K  +              A     +  +++IG      +   
Sbjct: 9   SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS 68

Query: 185 AKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVL 244
           A K G  + +N ++ D  + + + ++T G   R V  +        + +C+     +   
Sbjct: 69  ALKAGAWQVINYREED--LVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSF 126

Query: 245 VGVPNKDDAFKTHPMNLLNERTLKGTFFGNY 275
                         +N      +       Y
Sbjct: 127 GNSSGAVTGVNLGILNQKGSLYVTRPSLQGY 157

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 36.0 bits (82), Expect = 0.003
 Identities = 29/154 (18%), Positives = 48/154 (31%), Gaps = 28/154 (18%)

Query: 5   KRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDH-----VLPVFTGECKECPHC-HSE 58
           +        P I GHE  G V  V     DL          ++      C EC  C  S+
Sbjct: 50  RGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSK 109

Query: 59  ESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVG-CVAKINPAA 117
           E  +C   ++       IN G S +        H  G   +S + V      V K++   
Sbjct: 110 EPYLCPNRKVYG-----INRGCSEYP-------HLRGC--YSSHIVLDPETDVLKVSEKI 155

Query: 118 PLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 151
                  L           + + + ++   V ++
Sbjct: 156 THRLP--LKEA-----NKALELMESREALKVILY 182

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 35.8 bits (81), Expect = 0.003
 Identities = 29/147 (19%), Positives = 42/147 (28%), Gaps = 24/147 (16%)

Query: 4   DKRWGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMC 63
                  P  P   GHE  G +E V EGV  L+ GD V+         C  C + E   C
Sbjct: 48  MWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHC 107

Query: 64  DLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVC 123
           + L                                F+E+  T    V K+     ++   
Sbjct: 108 ENLE----------------------FPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDI 145

Query: 124 VLSCGISTGFGATVNVAKPKKGQSVAI 150
                I+              G++V I
Sbjct: 146 HKLDEINDVLERLEKGEVL--GRAVLI 170

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Length = 184

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

 Score = 35.7 bits (81), Expect = 0.003
 Identities = 25/177 (14%), Positives = 51/177 (28%), Gaps = 12/177 (6%)

Query: 146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG---VTEFVNPKDYDKP 202
           ++ A+ GLG  G A A    + G   ++  D++  R  E +  G                
Sbjct: 2   KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPD 60

Query: 203 VQQVIADMTNGGVDRSVECTGSVQAMISAFEC---VHDGWGVAVLVGVPNKDDAFKTHPM 259
           +      +     D  +    ++     A      + +G  + +  G       F+    
Sbjct: 61  LLTSDIGLAVKDADVILIVVPAIHHASIAANIASYISEGQLIILNPGATGGALEFRKILR 120

Query: 260 NLLNERTLKGTFFGN-YKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLM 315
                    G      +  RS+ P  V     K           +P ++   A + +
Sbjct: 121 ENGAPEVTIGETSSMLFTCRSERPGQVTVNAIK----GAMDFACLPAAKAGWALEQI 173

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	329
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.96
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.95
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.94
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.94
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.94
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.93
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.93
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.92
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.92
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.92
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.92
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.92
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.92
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.91
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.91
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.91
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.91
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.9
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.9
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.9
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.89
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.89
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.89
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.88
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.88
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.87
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.87
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.86
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.86
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.85
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.84
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.84
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.84
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.83
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.81
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.81
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.8
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.77
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.72
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.61
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.57
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.51
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.49
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.47
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.46
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	98.7
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.68
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.81
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.79
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.61
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.57
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.54
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.47
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.45
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.45
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.38
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.21
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.19
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.17
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.17
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.16
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.16
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.12
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.12
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.06
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.04
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.03
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.99
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.99
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.98
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.95
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.95
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.93
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.93
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.9
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.89
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.83
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.83
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.82
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.82
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.8
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.8
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.79
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.79
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.77
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.77
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.74
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.72
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.71
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.69
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.68
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.66
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.65
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.64
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.64
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.64
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.63
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.62
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.62
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.61
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.59
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.58
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.57
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.56
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.55
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.53
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.51
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.5
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.49
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.48
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.41
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.4
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.39
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.38
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.35
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.32
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.3
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.28
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.26
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.24
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.17
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.17
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.16
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.13
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.13
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.13
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.11
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.11
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.08
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.0
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.0
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	95.96
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.91
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.82
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.81
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	95.81
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	95.78
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.7
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	95.69
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.67
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.58
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.51
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.49
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	95.47
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.41
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.38
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.36
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.32
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.31
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.23
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	95.22
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.21
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	95.2
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	95.15
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.05
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.03
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.73
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	94.71
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	94.65
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.61
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.57
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.52
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.41
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	94.31
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.3
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	94.16
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.99
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	93.95
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	93.89
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	93.8
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.75
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.74
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.71
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	93.69
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.68
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	93.58
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.52
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	93.51
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.47
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	93.43
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	93.4
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.39
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	93.37
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	93.19
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	93.13
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.06
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.97
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	92.96
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	92.91
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	92.88
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	92.88
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.73
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	92.56
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	92.5
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	92.47
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.47
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	92.42
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.35
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.12
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	91.95
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	91.86
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.78
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.64
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	91.63
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	91.55
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	91.54
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	91.54
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	91.49
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	91.38
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.37
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.36
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	91.35
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	91.29
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.19
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	91.17
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	91.14
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.01
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	90.96
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.92
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	90.91
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	90.87
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	90.81
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.78
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.74
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	90.71
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	90.69
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	90.67
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.67
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	90.62
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	90.59
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	90.57
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	90.47
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	90.47
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	90.44
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	90.44
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.39
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	90.37
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	90.35
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	90.34
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	90.33
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.26
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	90.25
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.24
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.21
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	90.21
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	90.13
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	90.07
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.99
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	89.9
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	89.88
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	89.71
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	89.69
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	89.56
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	89.33
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	89.21
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	89.17
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	89.12
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.05
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	89.02
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	88.97
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	88.92
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	88.92
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	88.92
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	88.89
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	88.88
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	88.86
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.82
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	88.81
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.72
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	88.68
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	88.67
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	88.59
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	88.54
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	88.24
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	88.23
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	88.21
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.08
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.07
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	88.05
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	87.97
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.93
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	87.89
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.8
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	87.65
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	87.62
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	87.37
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	87.36
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	87.22
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	87.21
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.21
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.1
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	86.98
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	86.7
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	86.7
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.55
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	86.45
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	86.38
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	86.32
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.08
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	86.02
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	85.93
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	85.74
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	85.61
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	85.55
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	85.37
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	85.3
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	85.19
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	85.19
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	84.95
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	84.89
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	84.81
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	84.76
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	84.74
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	84.58
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	84.36
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	83.99
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	83.89
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	83.31
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	83.31
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	83.14
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	83.0
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	83.0
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	82.99
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	82.74
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	82.57
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	82.37
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	82.31
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.26
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	82.26
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	82.25
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	82.24
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.08
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	82.06
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	81.83
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	81.63
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	81.61
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	81.53
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	81.53
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.45
d1p5ja_	319	L-serine dehydratase {Human (Homo sapiens) [TaxId:	81.37
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	81.27
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	81.22
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	81.18
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	81.11
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	81.1
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	81.06
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	80.97
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	80.93
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	80.93
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	80.59
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	80.57
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	80.48
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.29
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	80.22
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	80.02

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.96  E-value=1.7e-28  Score=197.72  Aligned_cols=173  Identities=34%  Similarity=0.514  Sum_probs=152.5

Q ss_pred             CCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCC
Q 047713          117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNP  196 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~  196 (329)
                      ++++.+++++|++.|||+++.+.+++++|++|+|+|+|++|++++|+|+.+|+++|++++.+++|+++++++|+++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            35678999999999999999999999999999999999999999999999999888999999999999999999999998


Q ss_pred             CCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccc-cccccccceEEEeeecCC
Q 047713          197 KDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTH-PMNLLNERTLKGTFFGNY  275 (329)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~  275 (329)
                      ++.+  +.+.+++++++++|+||||+|+++.++.++++++++ |+++.+|.........+. ..++.+++++.|++++++
T Consensus        81 ~~~~--~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~  157 (174)
T d1f8fa2          81 KTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSG  157 (174)
T ss_dssp             TTSC--HHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred             CCcC--HHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCC
Confidence            8766  899999999889999999999999999999999998 999999875444333333 234678999999988877


Q ss_pred             CCCCCHHHHHHHHHcCC
Q 047713          276 KPRSDLPSVVEKYMNKE  292 (329)
Q Consensus       276 ~~~~~~~~~i~~~~~~~  292 (329)
                      ..+++++++++++++|+
T Consensus       158 ~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         158 SPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHHHHHHHHcCC
Confidence            66677899999999874

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.95  E-value=1.9e-27  Score=191.32  Aligned_cols=173  Identities=43%  Similarity=0.832  Sum_probs=147.4

Q ss_pred             ccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCC
Q 047713          119 LDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKD  198 (329)
Q Consensus       119 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  198 (329)
                      +.+||.+.|++.|+|+++.+.+++++|++|+|+|+|++|++++|+|+.+|+++|++++.+++|+++++++|+++++|+.+
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            34689999999999999889999999999999999999999999999999989999999999999999999999999876


Q ss_pred             CCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCCC
Q 047713          199 YDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPR  278 (329)
Q Consensus       199 ~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  278 (329)
                      .+.......+..+++++|+|||++|....++.++..+..++|+++.+|.......+++.+..+.+++++.|+.++++.. 
T Consensus        82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~-  160 (174)
T d1p0fa2          82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKG-  160 (174)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCCG-
T ss_pred             chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCCH-
Confidence            5544555555566669999999999998999898887653389999998766666666555566788999999887643 


Q ss_pred             CCHHHHHHHHHcCC
Q 047713          279 SDLPSVVEKYMNKE  292 (329)
Q Consensus       279 ~~~~~~i~~~~~~~  292 (329)
                      ++++++++++.+|+
T Consensus       161 ~d~~~lidl~~~gK  174 (174)
T d1p0fa2         161 EEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            58999999999874

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=2.3e-27  Score=190.44  Aligned_cols=173  Identities=42%  Similarity=0.873  Sum_probs=145.7

Q ss_pred             CccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCC
Q 047713          118 PLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPK  197 (329)
Q Consensus       118 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  197 (329)
                      +++++|.+.|++.|+|+++.+.+++++|++|+|+|+|++|++++|+|+.+|+++|++++.+++|+++++++|+++++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            46789999999999999988899999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCC
Q 047713          198 DYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKP  277 (329)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  277 (329)
                      +.+.......++..++++|+||||+|.++.++.+++++++++|+++.+|....+..++  +..+..+.++.|+.++++..
T Consensus        82 ~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~--~~~~~~~k~i~Gs~~Gs~~~  159 (174)
T d1e3ia2          82 ELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIP--TVDVILGRSINGTFFGGWKS  159 (174)
T ss_dssp             GCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEE--HHHHHTTCEEEECSGGGCCH
T ss_pred             cchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccc--hHHHhccCEEEEEEeeCCCh
Confidence            5443355555555555999999999999999999999998339999999865543333  33334567899999888766


Q ss_pred             CCCHHHHHHHHHcCC
Q 047713          278 RSDLPSVVEKYMNKE  292 (329)
Q Consensus       278 ~~~~~~~i~~~~~~~  292 (329)
                      .++++++++++.+|+
T Consensus       160 ~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         160 VDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            678889999988874

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=3.4e-27  Score=190.73  Aligned_cols=174  Identities=51%  Similarity=0.880  Sum_probs=146.7

Q ss_pred             CccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCC
Q 047713          118 PLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPK  197 (329)
Q Consensus       118 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  197 (329)
                      ++++||.++|++.|+|+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            57889999999999999988899999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC-CCccccccccccccceEEEeeecCCC
Q 047713          198 DYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK-DDAFKTHPMNLLNERTLKGTFFGNYK  276 (329)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~  276 (329)
                      +.+++..+.+++.+++++|+|||++|....++.++.+++++ +.++.++.... .......+..+.+++++.|+.++++.
T Consensus        82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2fzwa2          82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWK  160 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCc
Confidence            65445777777777779999999999988999999999987 77776654333 22222333445688999999988876


Q ss_pred             CCCCHHHHHHHHHcCC
Q 047713          277 PRSDLPSVVEKYMNKE  292 (329)
Q Consensus       277 ~~~~~~~~i~~~~~~~  292 (329)
                      .++++.++++++.+|+
T Consensus       161 ~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         161 SVESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            6677889999998874

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.94  E-value=6.1e-27  Score=188.18  Aligned_cols=170  Identities=28%  Similarity=0.477  Sum_probs=144.0

Q ss_pred             CCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCC
Q 047713          117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNP  196 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~  196 (329)
                      +|+++|+.++++++|+|++ .+.+++++|++|+|+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a-~~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHG-AELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHH-HHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHH-HHHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            4788999999999999998 577999999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccc---cccccceEEEeee
Q 047713          197 KDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPM---NLLNERTLKGTFF  272 (329)
Q Consensus       197 ~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~---~~~~~~~~~g~~~  272 (329)
                      ++.+  +.+.+++++++ ++|+|||++|+++.++.++++++++ |+++.+|........+....   ...++.++.++..
T Consensus        80 ~~~~--~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          80 KNGH--IEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             GGSC--HHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             cchh--HHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence            8776  88999999988 9999999999988999999999998 99999997665444333221   2356778888765


Q ss_pred             cCCCCCCCHHHHHHHHHcCC
Q 047713          273 GNYKPRSDLPSVVEKYMNKE  292 (329)
Q Consensus       273 ~~~~~~~~~~~~i~~~~~~~  292 (329)
                      +...  ...+++++++..|+
T Consensus       157 ~~~r--~~~e~l~~li~~gk  174 (174)
T d1jqba2         157 PGGR--LRAERLRDMVVYNR  174 (174)
T ss_dssp             CCHH--HHHHHHHHHHHTTS
T ss_pred             CCCc--ccHHHHHHHHHcCC
Confidence            4431  34566778887763

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.94  E-value=1.8e-26  Score=186.27  Aligned_cols=175  Identities=47%  Similarity=0.941  Sum_probs=145.5

Q ss_pred             CccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCC
Q 047713          118 PLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPK  197 (329)
Q Consensus       118 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  197 (329)
                      ++++||+++|++.|+|+++.+.+++++|++|||+|+|++|++++++++..|+++|++++++++|+++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            57889999999999999999999999999999999999999999999999988999999999999999999999999876


Q ss_pred             CCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCCC
Q 047713          198 DYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKP  277 (329)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  277 (329)
                      +.++.....++...++++|++||++|.+..++.++.+++.+.|.++..+...........+..+.+++++.|+.++++.+
T Consensus        82 ~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  161 (176)
T d2jhfa2          82 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKS  161 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCH
T ss_pred             CchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCCH
Confidence            65434555555555569999999999998999999999886245555544444433334445567899999999888776


Q ss_pred             CCCHHHHHHHHHcCC
Q 047713          278 RSDLPSVVEKYMNKE  292 (329)
Q Consensus       278 ~~~~~~~i~~~~~~~  292 (329)
                      +++++++++++.+|+
T Consensus       162 ~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         162 KDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            678999999998874

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.7e-27  Score=188.12  Aligned_cols=167  Identities=19%  Similarity=0.269  Sum_probs=141.6

Q ss_pred             CCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeC
Q 047713          117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVN  195 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~  195 (329)
                      +|+++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5789999999999999999988999999999999986 9999999999999999 7888888999999999999999999


Q ss_pred             CCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecC
Q 047713          196 PKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGN  274 (329)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~  274 (329)
                      +++.+  +.+.+++.+++ ++|+|||++|. ..++.++++++++ |+++.+|.... ..++ ...++.+++++.|+.+..
T Consensus        80 ~~~~~--~~~~i~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~-~~~~~~k~~~i~g~~~~~  153 (174)
T d1yb5a2          80 HREVN--YIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRGT-IEIN-PRDTMAKESSIIGVTLFS  153 (174)
T ss_dssp             TTSTT--HHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE-EEEEECCCCSC-EEEC-THHHHTTTCEEEECCGGG
T ss_pred             ccccc--HHHHhhhhhccCCceEEeecccH-HHHHHHHhccCCC-CEEEEEecCCC-CCCC-HHHHHHCCCEEEEEEecC
Confidence            88776  99999999988 99999999975 6899999999998 99999986432 2222 233467899999987654


Q ss_pred             CCCCCCHHHHHHHHHcC
Q 047713          275 YKPRSDLPSVVEKYMNK  291 (329)
Q Consensus       275 ~~~~~~~~~~i~~~~~~  291 (329)
                      .. .+++++++++++++
T Consensus       154 ~~-~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         154 ST-KEEFQQYAAALQAG  169 (174)
T ss_dssp             CC-HHHHHHHHHHHHHH
T ss_pred             CC-HHHHHHHHHHHHHH
Confidence            32 24577777776653

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=2.1e-26  Score=186.95  Aligned_cols=169  Identities=26%  Similarity=0.390  Sum_probs=144.0

Q ss_pred             ccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCC
Q 047713          119 LDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKD  198 (329)
Q Consensus       119 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  198 (329)
                      ++.+|++.|+++|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++++++.+
T Consensus         3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~   82 (182)
T d1vj0a2           3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc
Confidence            45678899999999999888889999999999999999999999999999988999999999999999999999998877


Q ss_pred             CC-chHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccc--cccccccceEEEeeecC
Q 047713          199 YD-KPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTH--PMNLLNERTLKGTFFGN  274 (329)
Q Consensus       199 ~~-~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~--~~~~~~~~~~~g~~~~~  274 (329)
                      .+ .+..+.+++++++ ++|+|||++|++..++.++++++++ |+++.+|........+..  ...+.|++++.|++.++
T Consensus        83 ~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          83 TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence            65 2245567777877 9999999999988999999999998 999999975544444433  23467899999988754


Q ss_pred             CCCCCCHHHHHHHHHcC
Q 047713          275 YKPRSDLPSVVEKYMNK  291 (329)
Q Consensus       275 ~~~~~~~~~~i~~~~~~  291 (329)
                      .   .+++++++++.++
T Consensus       162 ~---~~~~~~~~~i~~~  175 (182)
T d1vj0a2         162 T---SHFVKTVSITSRN  175 (182)
T ss_dssp             H---HHHHHHHHHHHTC
T ss_pred             H---HHHHHHHHHHHHC
Confidence            4   5788888888875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=2.8e-26  Score=184.61  Aligned_cols=172  Identities=41%  Similarity=0.753  Sum_probs=146.4

Q ss_pred             CccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCC
Q 047713          118 PLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPK  197 (329)
Q Consensus       118 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  197 (329)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|+.++|+++.+|+++|++++.+++|+++++++|+++++|+.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            57899999999999999988999999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCC
Q 047713          198 DYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYK  276 (329)
Q Consensus       198 ~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  276 (329)
                      +.+. ..+.+.+.+.+ ++|+|||++|....+..++..+..++|+++.+|.........+.+..+.++.++.|+.++...
T Consensus        83 ~~~~-~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  161 (176)
T d1d1ta2          83 DSTK-PISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLK  161 (176)
T ss_dssp             GCSS-CHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             ccch-HHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCCC
Confidence            6542 34555555555 999999999998888888887765449999999876665555555556678999999988877


Q ss_pred             CCCCHHHHHHHHHc
Q 047713          277 PRSDLPSVVEKYMN  290 (329)
Q Consensus       277 ~~~~~~~~i~~~~~  290 (329)
                      +++++.++++++.+
T Consensus       162 ~~~dip~li~~~~~  175 (176)
T d1d1ta2         162 SRDDVPKLVTEFLA  175 (176)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHhC
Confidence            67788888887654

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=1.4e-26  Score=188.32  Aligned_cols=173  Identities=20%  Similarity=0.261  Sum_probs=144.2

Q ss_pred             cchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCC
Q 047713          120 DKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKD  198 (329)
Q Consensus       120 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  198 (329)
                      +|||++++++.|||+++++.+++++|++|||+|+ |++|++++|+|+.+|+ +++++++++++.+.++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            5799999999999999999999999999999976 9999999999999999 8888888999999999999999999887


Q ss_pred             CCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCC-
Q 047713          199 YDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYK-  276 (329)
Q Consensus       199 ~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-  276 (329)
                      .+  +.+.+++.+++ ++|+|||++|. +.++.++++|+++ |+++.+|..............+.++.++.+....... 
T Consensus        80 ~~--~~~~v~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (183)
T d1pqwa_          80 VD--FADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLK  155 (183)
T ss_dssp             ST--HHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHH
T ss_pred             cC--HHHHHHHHhCCCCEEEEEecccc-hHHHHHHHHhcCC-CEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceec
Confidence            76  99999999988 99999999986 6899999999998 9999998655443333333445678888776543221 


Q ss_pred             -----CCCCHHHHHHHHHcCCCCCCc
Q 047713          277 -----PRSDLPSVVEKYMNKELEVEK  297 (329)
Q Consensus       277 -----~~~~~~~~i~~~~~~~l~~~~  297 (329)
                           .++.++++++++.+|++++-|
T Consensus       156 ~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         156 LQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             cCHHHHHHHHHHHHHHHHCCCCceeC
Confidence                 014577888999999886543

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=4.4e-26  Score=182.98  Aligned_cols=168  Identities=23%  Similarity=0.329  Sum_probs=147.7

Q ss_pred             CCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeC
Q 047713          117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVN  195 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~  195 (329)
                      +|+.+||+++|++.|||+++ .+.++++|++|+|+|+ |++|++++|+++..|..+|++++.+++|.++++++|++.+++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            46789999999999999985 6789999999999985 999999999999999879999999999999999999999998


Q ss_pred             CCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecC
Q 047713          196 PKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGN  274 (329)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~  274 (329)
                      +.+.+  +.+.+++.+.+ ++|+|||++|++..++.++++++++ |+++.+|....+..++. ..++.+++++.|++.++
T Consensus        80 ~~~~~--~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~-~~~~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          80 ASMQD--PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADLHYHA-PLITLSEIQFVGSLVGN  155 (170)
T ss_dssp             TTTSC--HHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCCCCCH-HHHHHHTCEEEECCSCC
T ss_pred             cCCcC--HHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEeccccCccccCH-HHHHhCCcEEEEEecCC
Confidence            87766  88888888877 8999999999999999999999998 99999997665544443 33567999999988765


Q ss_pred             CCCCCCHHHHHHHHHcCC
Q 047713          275 YKPRSDLPSVVEKYMNKE  292 (329)
Q Consensus       275 ~~~~~~~~~~i~~~~~~~  292 (329)
                      +   ++++++++++++|+
T Consensus       156 ~---~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 Q---SDFLGIMRLAEAGK  170 (170)
T ss_dssp             H---HHHHHHHHHHHTTS
T ss_pred             H---HHHHHHHHHHHcCC
Confidence            5   67999999999874

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.93  E-value=1.4e-25  Score=180.92  Aligned_cols=173  Identities=49%  Similarity=0.885  Sum_probs=142.1

Q ss_pred             CccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCC
Q 047713          118 PLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPK  197 (329)
Q Consensus       118 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  197 (329)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|+.++++++..|.++|++++++++|++.++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            57889999999999999998999999999999999999999999999999998999999999999999999999999987


Q ss_pred             CCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCC
Q 047713          198 DYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYK  276 (329)
Q Consensus       198 ~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  276 (329)
                      +.+. ....+++.+.+ ++|+|||++|....+..++.+++++++.++..+..... .....+..+.++.++.|+..+++.
T Consensus        82 ~~~~-~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~-~~~~~~~~~~~~~~i~Gs~~G~~~  159 (175)
T d1cdoa2          82 DHSE-PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH-DVATRPIQLIAGRTWKGSMFGGFK  159 (175)
T ss_dssp             GCSS-CHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSS-CEEECHHHHHTTCEEEECSGGGCC
T ss_pred             Ccch-hHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCc-ccCccHHHHHCCcEEEEEEEeCCc
Confidence            6542 34455555544 99999999999888999998877762444545543333 223334446678999999988877


Q ss_pred             CCCCHHHHHHHHHcCC
Q 047713          277 PRSDLPSVVEKYMNKE  292 (329)
Q Consensus       277 ~~~~~~~~i~~~~~~~  292 (329)
                      ++++++++++++.+|+
T Consensus       160 ~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         160 GKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            6678999999998874

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.92  E-value=7.5e-26  Score=185.76  Aligned_cols=142  Identities=38%  Similarity=0.639  Sum_probs=125.3

Q ss_pred             CCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCC
Q 047713            9 QTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGK   88 (329)
Q Consensus         9 ~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   88 (329)
                      ....+|.++|||++|+|+++|++++.|++||||++.+..+|+.|.+|+.|+++.|.+.......+. ...+..+...+|.
T Consensus        58 ~~~~~p~i~GhE~~G~v~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~-~~~~~~~~~~~g~  136 (199)
T d1cdoa1          58 HKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDV-MSPKETRFTCKGR  136 (199)
T ss_dssp             CTTSCSEECCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTT-TSCSCCCEEETTE
T ss_pred             cccccccccccccceEEEEEcCCCceecCCCEEEEeeeccccccccccCCCccccccccccccccc-ccCcccceeeccc
Confidence            344689999999999999999999999999999999999999999999999999998766544433 3344556677777


Q ss_pred             ceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEE
Q 047713           89 PIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF  151 (329)
Q Consensus        89 ~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  151 (329)
                      ..++...+|+|+||+++|+.++++||++++++++|++.+++.|++.++......+.|++|||+
T Consensus       137 ~~~~~~~~Ggfaey~~v~~~~~~~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         137 KVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             EEEEGGGTCCSBSEEEEEGGGEEECCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             eeecccccCCceEEEEEchHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            788888889999999999999999999999999999999999999998888888999999984

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=6.5e-26  Score=181.55  Aligned_cols=171  Identities=15%  Similarity=0.135  Sum_probs=130.1

Q ss_pred             CCccchhcccccccchhhh---hhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce
Q 047713          117 APLDKVCVLSCGISTGFGA---TVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE  192 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~---l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~  192 (329)
                      +|++|||++++++.|||++   |.+..+.++|++|||+|+ |++|.+++|+|+..|+ +|+++++++++.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            5899999999999999966   445688899999999975 9999999999999999 8999999999999999999999


Q ss_pred             eeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeee
Q 047713          193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFF  272 (329)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~  272 (329)
                      ++++++.   +.+.++...++++|+|||++|. ..+..++++|+++ |+++.+|...+.........++.|++++.|...
T Consensus        80 vi~~~~~---~~~~~~~~~~~gvD~vid~vgg-~~~~~~l~~l~~~-Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~  154 (176)
T d1xa0a2          80 VLAREDV---MAERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYG-GAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDS  154 (176)
T ss_dssp             EEECC------------CCSCCEEEEEECSTT-TTHHHHHHTEEEE-EEEEECSCCSSSCCCCCSHHHHHTTCEEEECCS
T ss_pred             eeecchh---HHHHHHHhhccCcCEEEEcCCc-hhHHHHHHHhCCC-ceEEEeecccCcccCCCHHHHHHCCcEEEEEeC
Confidence            9987643   3444444444599999999986 5899999999998 999999986554332233445789999999643


Q ss_pred             cCCCCCCCHHHHHHHHHcCCCCC
Q 047713          273 GNYKPRSDLPSVVEKYMNKELEV  295 (329)
Q Consensus       273 ~~~~~~~~~~~~i~~~~~~~l~~  295 (329)
                      .. .+.+...++++.+. +++++
T Consensus       155 ~~-~~~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         155 VY-CPMDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             SS-CCHHHHHHHHHHHH-TTTCC
T ss_pred             Cc-CCHHHHHHHHHHHh-cccCC
Confidence            22 22234555666553 55543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=3e-25  Score=177.36  Aligned_cols=165  Identities=23%  Similarity=0.326  Sum_probs=140.4

Q ss_pred             CCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCC
Q 047713          117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNP  196 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~  196 (329)
                      +|++++|++++++.|||+++ +++++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999985 56899999999999999999999999999998 89999999999999999999999988


Q ss_pred             CCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCC
Q 047713          197 KDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYK  276 (329)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  276 (329)
                      .+.+  +.+.+++.+.+ .+.+++++++++.++.++++++++ |+++.+|.......++. ..++.|++++.|++.+++ 
T Consensus        79 ~~~~--~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~-~~~~~k~~~i~Gs~~~~~-  152 (166)
T d1llua2          79 RQED--PVEAIQRDIGG-AHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPPGDFPTPI-FDVVLKGLHIAGSIVGTR-  152 (166)
T ss_dssp             TTSC--HHHHHHHHHSS-EEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCSSEEEEEH-HHHHHTTCEEEECCSCCH-
T ss_pred             cchh--HHHHHHHhhcC-CcccccccccchHHHHHHHHhcCC-cEEEEEEecCCCccCCH-HHHHhCCcEEEEEeecCH-
Confidence            8776  77777776544 666677777889999999999998 99999997555433332 334679999999877654 


Q ss_pred             CCCCHHHHHHHHHcC
Q 047713          277 PRSDLPSVVEKYMNK  291 (329)
Q Consensus       277 ~~~~~~~~i~~~~~~  291 (329)
                        ++++++++++.+|
T Consensus       153 --~d~~e~l~l~~~G  165 (166)
T d1llua2         153 --ADLQEALDFAGEG  165 (166)
T ss_dssp             --HHHHHHHHHHHTT
T ss_pred             --HHHHHHHHHHHCc
Confidence              6789999999876

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.92  E-value=5e-25  Score=176.98  Aligned_cols=165  Identities=22%  Similarity=0.342  Sum_probs=140.3

Q ss_pred             ccchhcccccccchhhhhhhcc-CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCC
Q 047713          119 LDKVCVLSCGISTGFGATVNVA-KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPK  197 (329)
Q Consensus       119 ~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  197 (329)
                      +.++|++++++.|||+++.... .+++|++|+|+|+|++|++++|+|+.+|+++|++++.+++|+++++++|+++++++.
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            4678999999999999987655 589999999999999999999999999988999999999999999999999999876


Q ss_pred             CCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCC
Q 047713          198 DYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYK  276 (329)
Q Consensus       198 ~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  276 (329)
                      ++   ..+.+.+.+.+ ++|+|||++|+...++.++++++++ |+++.+|... +..++. ..++.+++++.|++.+++ 
T Consensus        86 ~~---~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~-~~~~~~-~~l~~k~~~i~Gs~~~~~-  158 (172)
T d1h2ba2          86 RD---PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGG-ELRFPT-IRVISSEVSFEGSLVGNY-  158 (172)
T ss_dssp             SC---HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCSS-CCCCCH-HHHHHTTCEEEECCSCCH-
T ss_pred             cc---HHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCcc-cccCCH-HHHHhCCcEEEEEEecCH-
Confidence            54   44556666766 9999999999988999999999998 9999998643 223332 334678999999987665 


Q ss_pred             CCCCHHHHHHHHHcCC
Q 047713          277 PRSDLPSVVEKYMNKE  292 (329)
Q Consensus       277 ~~~~~~~~i~~~~~~~  292 (329)
                        ++++++++++.+|+
T Consensus       159 --~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         159 --VELHELVTLALQGK  172 (172)
T ss_dssp             --HHHHHHHHHHHTTS
T ss_pred             --HHHHHHHHHHHcCC
Confidence              67999999999874

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.2e-24  Score=173.06  Aligned_cols=168  Identities=21%  Similarity=0.338  Sum_probs=139.6

Q ss_pred             CCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCC
Q 047713          117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNP  196 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~  196 (329)
                      +|+++|| +..++++||++ .+++++++|++|+|+|+|++|++++|+|+.+|+++|++++.+++|+++++++|++.+++.
T Consensus         1 vS~e~Aa-l~epla~a~~a-~~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~   78 (171)
T d1pl8a2           1 VTFEEGA-LIEPLSVGIHA-CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI   78 (171)
T ss_dssp             SCHHHHH-HHHHHHHHHHH-HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHH-HHHHHHHHHHH-HHHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence            4678866 55788999998 577899999999999999999999999999999899999999999999999999999988


Q ss_pred             CCCCchHHHHHHh---hhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeec
Q 047713          197 KDYDKPVQQVIAD---MTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFG  273 (329)
Q Consensus       197 ~~~~~~~~~~~~~---~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  273 (329)
                      .+.+  .....+.   ..+.++|+|||++|.+..++.++++++++ |+++.+|.......+++ ..++.|++++.|++..
T Consensus        79 ~~~~--~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~~~~~~~~-~~~~~k~l~i~Gs~~~  154 (171)
T d1pl8a2          79 SKES--PQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEMTTVPL-LHAAIREVDIKGVFRY  154 (171)
T ss_dssp             SSCC--HHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSCCCCCH-HHHHHTTCEEEECCSC
T ss_pred             cccc--cccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCCCCCccCH-HHHHHCCcEEEEEeCC
Confidence            7765  4333332   23348999999999999999999999998 99999998666544443 3446789999987632


Q ss_pred             CCCCCCCHHHHHHHHHcCCCC
Q 047713          274 NYKPRSDLPSVVEKYMNKELE  294 (329)
Q Consensus       274 ~~~~~~~~~~~i~~~~~~~l~  294 (329)
                          .++++++++++.+|+++
T Consensus       155 ----~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         155 ----CNTWPVAISMLASKSVN  171 (171)
T ss_dssp             ----SSCHHHHHHHHHTTSCC
T ss_pred             ----HhHHHHHHHHHHcCCCC
Confidence                26899999999999763

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.92  E-value=6.3e-26  Score=183.21  Aligned_cols=121  Identities=22%  Similarity=0.361  Sum_probs=108.9

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .++|+++|||++|+|+++|++|++|++||||++.+..+|+.|+.|..|..+.|.+.....                    
T Consensus        55 ~~~p~i~GhE~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~--------------------  114 (178)
T d1e3ja1          55 VKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCA--------------------  114 (178)
T ss_dssp             CCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETT--------------------
T ss_pred             ccCCeeeccccceEEEecCcccCCCCCCCEEEECcccccCCccccccCCcccccccccee--------------------
Confidence            467899999999999999999999999999999999999999999999999998755421                    


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL  153 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga  153 (329)
                       ....+|+|+||+++|+++++++|++++++++|++++++.|+|+++ +.+++++|++|+|+|+
T Consensus       115 -~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         115 -TPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS  175 (178)
T ss_dssp             -BTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred             -ccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence             112357999999999999999999999999999999999999984 7889999999999964

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=2.8e-25  Score=179.77  Aligned_cols=131  Identities=19%  Similarity=0.261  Sum_probs=120.7

Q ss_pred             CCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeC
Q 047713          117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVN  195 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~  195 (329)
                      +|+++||++++++.|||++|.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5899999999999999999999899999999999975 8899999999999999 8999999999999999999999999


Q ss_pred             CCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCC
Q 047713          196 PKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD  252 (329)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~  252 (329)
                      +++.+  +.+.+++++++ ++|+|+|++|. +.+..++++++++ |+++.++......
T Consensus        80 ~~~~d--~~~~v~~~t~g~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~  133 (179)
T d1qora2          80 YREED--LVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQRR-GLMVSFGNSSGAV  133 (179)
T ss_dssp             TTTSC--HHHHHHHHTTTCCEEEEEECSCG-GGHHHHHHTEEEE-EEEEECCCTTCCC
T ss_pred             CCCCC--HHHHHHHHhCCCCeEEEEeCccH-HHHHHHHHHHhcC-CeeeecccccCCc
Confidence            98877  99999999988 99999999975 6899999999998 9999988655543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.91  E-value=2.3e-24  Score=172.50  Aligned_cols=168  Identities=25%  Similarity=0.412  Sum_probs=143.3

Q ss_pred             CCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCC
Q 047713          117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNP  196 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~  196 (329)
                      +|+++||++++++.|||+++ ...++++|++|||+|+|++|++++++|+..|+ +|++++++++|+++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            57899999999999999985 56889999999999999999999999999999 89999999999999999999999999


Q ss_pred             CCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCC
Q 047713          197 KDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYK  276 (329)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  276 (329)
                      .+.+  +...+++.+.+..|+| ++.++++.++.++++++++ |+++.+|....+..++. ..++.+++++.|+..++. 
T Consensus        79 ~~~~--~~~~~~~~~~~~~~~v-~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~~~~~~~~-~~~~~~~~~i~gs~~~~~-  152 (168)
T d1rjwa2          79 LKED--AAKFMKEKVGGVHAAV-VTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIPI-FDTVLNGIKIIGSIVGTR-  152 (168)
T ss_dssp             TTSC--HHHHHHHHHSSEEEEE-ESSCCHHHHHHHHHHEEEE-EEEEECCCCSSEEEEEH-HHHHHTTCEEEECCSCCH-
T ss_pred             ccch--hhhhcccccCCCceEE-eecCCHHHHHHHHHHhccC-CceEecccccCCCCCCH-HHHHHCCcEEEEEeeCCH-
Confidence            8877  8888888887644554 5566788999999999998 99999997655443332 334678999999876544 


Q ss_pred             CCCCHHHHHHHHHcCCCC
Q 047713          277 PRSDLPSVVEKYMNKELE  294 (329)
Q Consensus       277 ~~~~~~~~i~~~~~~~l~  294 (329)
                        ++++++++++.+|+++
T Consensus       153 --~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         153 --KDLQEALQFAAEGKVK  168 (168)
T ss_dssp             --HHHHHHHHHHHTTSCC
T ss_pred             --HHHHHHHHHHHhCCCC
Confidence              6799999999999763

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.91  E-value=1.2e-23  Score=168.69  Aligned_cols=167  Identities=20%  Similarity=0.293  Sum_probs=135.1

Q ss_pred             CCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCC
Q 047713          117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNP  196 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~  196 (329)
                      +|+++|| +..++++||++ +.+.++++|++|+|+|+|++|++++|+|+.+|+ +|++++.+++|+++++++|++..++.
T Consensus         1 VS~e~Aa-l~ePla~a~~a-~~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGA-LLEPLSVGVHA-CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHH-THHHHHHHHHH-HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHH-HHHHHHHHHHH-HHHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence            4678866 45678899998 477899999999999999999999999999999 89999999999999999999887654


Q ss_pred             CCCCc---hHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeec
Q 047713          197 KDYDK---PVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFG  273 (329)
Q Consensus       197 ~~~~~---~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  273 (329)
                      +....   +..+.+++..++++|+|||++|++..++.++++++++ |+++.+|.......++. ..++.|++++.|++..
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~-~~~~~k~i~i~gs~~~  155 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQMVTVPL-VNACAREIDIKSVFRY  155 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSSCCCCCH-HHHHTTTCEEEECCSC
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCCCCCCcCH-HHHHHCCCEEEEEECC
Confidence            43322   2334555555559999999999988999999999998 99999997665443332 3356789999987532


Q ss_pred             CCCCCCCHHHHHHHHHcCC
Q 047713          274 NYKPRSDLPSVVEKYMNKE  292 (329)
Q Consensus       274 ~~~~~~~~~~~i~~~~~~~  292 (329)
                          .++++++++++++|+
T Consensus       156 ----~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         156 ----CNDYPIALEMVASGR  170 (170)
T ss_dssp             ----SSCHHHHHHHHHTTS
T ss_pred             ----HHHHHHHHHHHHcCC
Confidence                257999999999874

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.91  E-value=2.3e-24  Score=174.65  Aligned_cols=164  Identities=15%  Similarity=0.201  Sum_probs=133.1

Q ss_pred             hcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCc
Q 047713          123 CVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDK  201 (329)
Q Consensus       123 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~  201 (329)
                      +++.+++.|||++|.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|+++++++.+.+ 
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~-   85 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTVN-   85 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSCS-
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccccc-
Confidence            5788899999999999999999999999986 9999999999999999 899999999999999999999999987776 


Q ss_pred             hHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCC---Cc--cccc-cccccccceEEEeeecC
Q 047713          202 PVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKD---DA--FKTH-PMNLLNERTLKGTFFGN  274 (329)
Q Consensus       202 ~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~---~~--~~~~-~~~~~~~~~~~g~~~~~  274 (329)
                       +.+.+.+.+.+ ++|+|||++|. +.++.++++++++ |+++.+|.....   ..  .... ..++.|++++.|++...
T Consensus        86 -~~~~~~~~~~~~Gvd~v~D~vG~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~  162 (182)
T d1v3va2          86 -SLEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR  162 (182)
T ss_dssp             -CHHHHHHHHCTTCEEEEEESSCH-HHHHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGG
T ss_pred             -HHHHHHHHhhcCCCceeEEecCc-hhhhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEec
Confidence             66666666666 99999999975 7899999999998 999999854321   11  1111 23467899999987765


Q ss_pred             CCCC---CCHHHHHHHHHcC
Q 047713          275 YKPR---SDLPSVVEKYMNK  291 (329)
Q Consensus       275 ~~~~---~~~~~~i~~~~~~  291 (329)
                      +..+   +.++++++++.+|
T Consensus       163 ~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         163 WQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             CCHHHHHHHHHHHHHHHHTT
T ss_pred             cChHHHHHHHHHHHHHHhCc
Confidence            5321   2356667776654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=4.7e-25  Score=176.46  Aligned_cols=165  Identities=18%  Similarity=0.285  Sum_probs=132.5

Q ss_pred             CCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCC
Q 047713          117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNP  196 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~  196 (329)
                      .+++.+|+++|+..|+|+++ ..+++++|++|+|+|+|++|++++|+|+.+|+ ++++++.+++++++++++|++.++++
T Consensus         4 ~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~~   81 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNS   81 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEET
T ss_pred             ccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEEC
Confidence            45667888999999999986 67899999999999999999999999999999 67788899999999999999999987


Q ss_pred             CCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCCC
Q 047713          197 KDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYK  276 (329)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  276 (329)
                      .+.+  .    .....+++|++||++|.+..++.++++++++ |+++.+|.............++.+++++.|+..++. 
T Consensus        82 ~~~~--~----~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~-  153 (168)
T d1uufa2          82 RNAD--E----MAAHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGI-  153 (168)
T ss_dssp             TCHH--H----HHTTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC-------CHHHHHTTTCEEEECCSCCH-
T ss_pred             chhh--H----HHHhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCH-
Confidence            6532  1    1112238999999999888899999999998 999999875543332233445678999999887655 


Q ss_pred             CCCCHHHHHHHHHcCCC
Q 047713          277 PRSDLPSVVEKYMNKEL  293 (329)
Q Consensus       277 ~~~~~~~~i~~~~~~~l  293 (329)
                        ++++++++++.++++
T Consensus       154 --~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         154 --PETQEMLDFCAEHGI  168 (168)
T ss_dssp             --HHHHHHHHHHHHHTC
T ss_pred             --HHHHHHHHHHHHcCC
Confidence              678899999887653

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.91  E-value=6.9e-25  Score=175.58  Aligned_cols=117  Identities=26%  Similarity=0.353  Sum_probs=105.2

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      .+++|+++|||++|+|+++|++|++|++||||++.+..+|+.|..|+.|+++.|.+....   |                
T Consensus        54 ~~~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~---g----------------  114 (171)
T d1h2ba1          54 QPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFP---G----------------  114 (171)
T ss_dssp             CCCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCB---T----------------
T ss_pred             CCccccccceeeeeeeecccCCCCcCCCCCEEEEcCccCCCCcccccccccccccccccc---e----------------
Confidence            457899999999999999999999999999999999999999999999999999875542   1                


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEE
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAI  150 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI  150 (329)
                         ...+|+|+||+++|+++++++|++++++.++++.+++.|+|+++ +..++ .|++|||
T Consensus       115 ---~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         115 ---LNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             ---TTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             ---eecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence               22357999999999999999999999998999999999999985 56777 8999998

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=5.7e-25  Score=175.94  Aligned_cols=164  Identities=18%  Similarity=0.265  Sum_probs=135.3

Q ss_pred             CccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCC
Q 047713          118 PLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPK  197 (329)
Q Consensus       118 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  197 (329)
                      +++.||+++|++.|+|+++ .+.++++|++|+|+|+|++|++++|+|+.+|+ +|++++.+++|+++++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence            4567899999999999986 56899999999999999999999999999999 799999999999999999999999875


Q ss_pred             CCCchHHHHHHhhhcCCccEEEEecCCHH--HHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecCC
Q 047713          198 DYDKPVQQVIADMTNGGVDRSVECTGSVQ--AMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNY  275 (329)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~d~Vid~~g~~~--~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  275 (329)
                      +.+ ++.    +...+++|+++|++++..  .++.++++++++ |+++.+|.......++.. .++.|++++.|+..++.
T Consensus        80 ~~~-~~~----~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~k~~~i~Gs~~g~~  152 (168)
T d1piwa2          80 EEG-DWG----EKYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQHEMLSLK-PYGLKAVSISYSALGSI  152 (168)
T ss_dssp             GTS-CHH----HHSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCSSCCEEEC-GGGCBSCEEEECCCCCH
T ss_pred             chH-HHH----HhhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEeccccccccccHH-HHHhCCcEEEEEeeCCH
Confidence            543 132    222347999999987643  467889999998 999999976665544433 34678999999887665


Q ss_pred             CCCCCHHHHHHHHHcCCC
Q 047713          276 KPRSDLPSVVEKYMNKEL  293 (329)
Q Consensus       276 ~~~~~~~~~i~~~~~~~l  293 (329)
                         ++++++++++.+|++
T Consensus       153 ---~~~~e~l~li~~gkI  167 (168)
T d1piwa2         153 ---KELNQLLKLVSEKDI  167 (168)
T ss_dssp             ---HHHHHHHHHHHHTTC
T ss_pred             ---HHHHHHHHHHHhCCC
Confidence               689999999999876

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.90  E-value=1.9e-24  Score=176.13  Aligned_cols=138  Identities=27%  Similarity=0.553  Sum_probs=106.3

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccC--CC
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIK--GK   88 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~   88 (329)
                      .++|+++|||++|+|+++|++|++|++||||+..+ .+|+.|.+|+.|+++.|++.......|.. .++..++...  +.
T Consensus        54 ~~~P~i~GHE~~G~V~~vG~~v~~~~vGDrVv~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~dg~~~~~~~~~~~  131 (194)
T d1f8fa1          54 VPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGV  131 (194)
T ss_dssp             CCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------
T ss_pred             ccCCcccccceEEEeeecCccceeEccCceeeeec-ccccCChhhhCCCcccccccccceecccc-ccceeeeecCCcee
Confidence            36899999999999999999999999999997665 48999999999999999976444333432 2222222222  22


Q ss_pred             ceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           89 PIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        89 ~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                      +..+....|+|+||+++++.+++++|++++++++                         +++.|+|++|++++|+|+.+|
T Consensus       132 ~~~~~~~~g~fae~~~v~~~~~~~ip~~i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g  186 (194)
T d1f8fa1         132 VNDHFFAQSSFATYALSRENNTVKVTKDFPFDQL-------------------------VKFYAFDEINQAAIDSRKGIT  186 (194)
T ss_dssp             CBCCGGGTCCSBSEEEEEGGGEEEECTTCCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSC
T ss_pred             eccccccccccceeEEEehHHEEECCCCCCcccE-------------------------EEEeCcHHHHHHHHHHHHHcC
Confidence            3333445689999999999999999999876653                         345678999999999999999


Q ss_pred             CCEEEEE
Q 047713          169 ASRIIGV  175 (329)
Q Consensus       169 ~~~vv~~  175 (329)
                      +++++++
T Consensus       187 ~~~iiaV  193 (194)
T d1f8fa1         187 LKPIIKI  193 (194)
T ss_dssp             SEEEEEC
T ss_pred             CCEEEEe
Confidence            9777765

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.90  E-value=2e-24  Score=177.83  Aligned_cols=138  Identities=41%  Similarity=0.704  Sum_probs=119.8

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCcccccc---CCCCccccCCccccccCC
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRIN---TDRGVMINDGQSRFSIKG   87 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~   87 (329)
                      ..+|+++|||++|+|+++|++|+++++||||++.+...|+.|.+|..|+++.|.+....   ...+....+...++..+|
T Consensus        59 ~~~P~v~GHE~~G~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g  138 (202)
T d1e3ia1          59 ALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKG  138 (202)
T ss_dssp             CCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETT
T ss_pred             cccccccccccceEEeeecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCc
Confidence            46899999999999999999999999999999999999999999999999999986653   223445566667788888


Q ss_pred             CceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEE
Q 047713           88 KPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF  151 (329)
Q Consensus        88 ~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  151 (329)
                      .+.++....|+|+||+++|+..+++||++++++.++++.+++.+++.++.   .+++|++|.|+
T Consensus       139 ~~v~~~~~~G~faey~~v~~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~---~~k~G~~V~vi  199 (202)
T d1e3ia1         139 RSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESINDAID---LMKEGKSIRTI  199 (202)
T ss_dssp             EEEBCCTTTCCSBSEEEEEGGGEEECCTTSCGGGGEEEEEEGGGHHHHHH---HHHTTCCSEEE
T ss_pred             eeeecccccCCceEEEEEehhhEEECCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCEEEEE
Confidence            88888888899999999999999999999999998888888888887752   24679998875

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=3.1e-24  Score=171.91  Aligned_cols=147  Identities=19%  Similarity=0.267  Sum_probs=118.4

Q ss_pred             CCccchhcccccccchhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeC
Q 047713          117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVN  195 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~  195 (329)
                      +++++||++++++.|||+++. ..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence            578999999999999999874 589999999999986 9999999999999999 8999999999999999999999997


Q ss_pred             CCCCCchHHHHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeeecC
Q 047713          196 PKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGN  274 (329)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~  274 (329)
                      +.+    .   ..+.+.+ ++|+|||++|  +.++.++++++++ |+++.+|...+.........++.|++++.|+++..
T Consensus        79 ~~~----~---~~~~~~~~g~D~v~d~~G--~~~~~~~~~l~~~-G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~~  148 (171)
T d1iz0a2          79 YAE----V---PERAKAWGGLDLVLEVRG--KEVEESLGLLAHG-GRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTP  148 (171)
T ss_dssp             GGG----H---HHHHHHTTSEEEEEECSC--TTHHHHHTTEEEE-EEEEEC-------CCCCTTHHHHTTCEEEECCHHH
T ss_pred             hhh----h---hhhhhccccccccccccc--hhHHHHHHHHhcC-CcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCcC
Confidence            653    2   2334445 8999999987  3689999999998 99999987654332222234568999999988765


Q ss_pred             C
Q 047713          275 Y  275 (329)
Q Consensus       275 ~  275 (329)
                      +
T Consensus       149 ~  149 (171)
T d1iz0a2         149 L  149 (171)
T ss_dssp             H
T ss_pred             h
Confidence            5

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.89  E-value=3.4e-24  Score=175.20  Aligned_cols=142  Identities=42%  Similarity=0.691  Sum_probs=119.8

Q ss_pred             CCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCC
Q 047713            9 QTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGK   88 (329)
Q Consensus         9 ~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   88 (329)
                      ....+|+++|||++|+|+++|++|+.+++||||++.+..+|+.|.+|+.|+++.|.+.......+.. .+...++..+|+
T Consensus        56 ~~~~~p~v~GhE~~G~V~~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~-~~~~~~~~~~g~  134 (197)
T d2fzwa1          56 PEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGK  134 (197)
T ss_dssp             TTCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTE
T ss_pred             ccccccccCCcceeeEEEeecCCceecCCCCEEEEccccccccccccccCccccCcccccccccccc-CCccceeccCCc
Confidence            3457899999999999999999999999999999999999999999999999999976554333332 233344666777


Q ss_pred             ceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEE
Q 047713           89 PIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF  151 (329)
Q Consensus        89 ~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  151 (329)
                      +.+++..+|+|+||+++|+.+++++|++++++++|++++++.|++.++.....-+.+++|||+
T Consensus       135 ~v~~~~g~GgfAey~vvp~~~~~~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         135 TILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             EEBCCTTTCCSBSEEEEEGGGEEECCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             ceecccccccceeEEEechHHEEECCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            777777789999999999999999999999999999999999999986555455678899874

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.2e-24  Score=171.23  Aligned_cols=121  Identities=18%  Similarity=0.225  Sum_probs=102.2

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ..++|+++|||++|+|+++|+++++|++||||++.+..+|+.|++|+.|+++.|.+.....                   
T Consensus        60 ~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g-------------------  120 (185)
T d1pl8a1          60 IVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCA-------------------  120 (185)
T ss_dssp             ECSSCEECCCEEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETT-------------------
T ss_pred             CCCCCeeeeeeeeeeEEEeccceeeecccccceecceeccccchhhccchhchhccceeee-------------------
Confidence            3467999999999999999999999999999999999999999999999999998765421                   


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCH
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGA  155 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~  155 (329)
                        ....+|+|+||++++++++++||+++++++++.++  +++++++ ++..++++|++||| |+|+
T Consensus       121 --~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~p--l~~a~~a-~~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         121 --TPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP--LEKALEA-FETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             --BTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEE--GGGHHHH-HHHHHTTCCSEEEE-ECCT
T ss_pred             --cccccccceEEEEEchHHEEECCCCCCHHHHHHHH--HHHHHHH-HHHhCCCCCCEEEE-EeCC
Confidence              11235799999999999999999999999877654  4567776 46678899999998 5443

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.89  E-value=2e-26  Score=188.83  Aligned_cols=142  Identities=19%  Similarity=0.173  Sum_probs=111.5

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|+++|||++|+|+++|++|+.|++||||++.+..+|+.|++|+.|+++.|.+.......|. +...           
T Consensus        58 ~~~P~v~GHE~~G~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~-~g~~-----------  125 (201)
T d1kola1          58 AQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA-YGYV-----------  125 (201)
T ss_dssp             CCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEE-BTCT-----------
T ss_pred             cccceeccceeeeeeeccccccccccccceeEEeeeeeccCChhhhCCCccccccccccccccc-cccc-----------
Confidence            3689999999999999999999999999999999999999999999999999987544322111 1000           


Q ss_pred             eeccccccccccEEeee--ccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 047713           91 YHFVGTSTFSEYTVTHV--GCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSG  168 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~--~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G  168 (329)
                      ..-..+|+|+||+++|.  .++++||++.+..+++++.+++.++++++ ...+.+.+    ++|+|++|++++|+||.+|
T Consensus       126 ~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g----~~g~G~vG~~~i~~ak~~G  200 (201)
T d1kola1         126 DMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYG----EFDAGVPKKFVIDPHKTFS  200 (201)
T ss_dssp             TSCCBCCCSBSEEEESSHHHHCEECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHH----HHHHTCSCEEEECTTCSSC
T ss_pred             CCCccccccccEEEeehHHCeEEECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCe----EEeeCHHHHHHHHHHHHcC
Confidence            00123589999999985  36999999877777788888888888874 33444434    3488999999999999888


Q ss_pred             C
Q 047713          169 A  169 (329)
Q Consensus       169 ~  169 (329)
                      +
T Consensus       201 A  201 (201)
T d1kola1         201 A  201 (201)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.88  E-value=1.5e-23  Score=170.75  Aligned_cols=173  Identities=15%  Similarity=0.205  Sum_probs=129.8

Q ss_pred             CCccchhcccccccchhhhhhhccCCCCCCeEEEE-cC-CHHHHHHHHHHHHcCCCEEEEEcCC----hhhHHHHHhcCC
Q 047713          117 APLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF-GL-GAVGLAAAEGARVSGASRIIGVDLN----PSRFNEAKKFGV  190 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~-Ga-g~iG~aai~la~~~G~~~vv~~~~~----~~~~~~~~~lg~  190 (329)
                      +|+++||++++++.|||++|.+..++++|++|+|+ |+ |++|++++|+||.+|+ +|+++.++    +++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            57899999999999999999999999999999997 55 9999999999999999 67766543    345567889999


Q ss_pred             ceeeCCCCCC-chHHHHHHhhh---cCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccce
Q 047713          191 TEFVNPKDYD-KPVQQVIADMT---NGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERT  266 (329)
Q Consensus       191 ~~~~~~~~~~-~~~~~~~~~~~---~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~  266 (329)
                      ++++++.+.+ .++...+++.+   ++++|+|||++|. +.+..++++|+++ |+++.+|.............++.|+++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~l~~k~~~  157 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGG-KSSTGIARKLNNN-GLMLTYGGMSFQPVTIPTSLYIFKNFT  157 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCH-HHHHHHHHTSCTT-CEEEECCCCSSCCEEECHHHHHHSCCE
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCc-chhhhhhhhhcCC-cEEEEECCccCCCccCcHHHHHHCCcE
Confidence            9999764321 22455555543   3489999999975 6788999999998 999999865443221112334568999


Q ss_pred             EEEeeecCCCCC------CCHHHHHHHHHcCC
Q 047713          267 LKGTFFGNYKPR------SDLPSVVEKYMNKE  292 (329)
Q Consensus       267 ~~g~~~~~~~~~------~~~~~~i~~~~~~~  292 (329)
                      +.|++++.+...      +.+.++++++++|+
T Consensus       158 i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         158 SAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            999876543211      23566667666653

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=5e-23  Score=167.32  Aligned_cols=172  Identities=16%  Similarity=0.183  Sum_probs=127.4

Q ss_pred             CCCccchhcccccccchhhhhhhccCCCCC--CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHhcCCc
Q 047713          116 AAPLDKVCVLSCGISTGFGATVNVAKPKKG--QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRF-NEAKKFGVT  191 (329)
Q Consensus       116 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~-~~~~~lg~~  191 (329)
                      |+|+.+. ++++++.|||++|.+..++++|  ++|||+|+ |++|++++|+||.+|+++|++++.++++. +..+++|++
T Consensus         1 ~~~~~~g-alg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad   79 (187)
T d1vj1a2           1 HLSYFLG-AIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD   79 (187)
T ss_dssp             CGGGGGT-TTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS
T ss_pred             CccHHHH-HhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce
Confidence            3556664 4778899999999999999987  88999985 99999999999999997788776666554 456789999


Q ss_pred             eeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCC-cc----ccc----ccccc
Q 047713          192 EFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDD-AF----KTH----PMNLL  262 (329)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~-~~----~~~----~~~~~  262 (329)
                      .++|+.+++  +.+.+++.++.++|+|||++|. +.++.++++++++ |+++.+|...... ..    ...    .....
T Consensus        80 ~vi~~~~~~--~~~~~~~~~~~GvDvv~D~vGg-~~~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          80 AAVNYKTGN--VAEQLREACPGGVDVYFDNVGG-DISNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             EEEETTSSC--HHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHHH
T ss_pred             EEeeccchh--HHHHHHHHhccCceEEEecCCc-hhHHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            999998887  9999999987799999999985 7899999999998 9999998643210 01    110    11234


Q ss_pred             ccceEEEeeecCCCCC--CCHHHHHHHHHcCC
Q 047713          263 NERTLKGTFFGNYKPR--SDLPSVVEKYMNKE  292 (329)
Q Consensus       263 ~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~  292 (329)
                      |++++.|+.+..+.++  +.++++.+++.+|+
T Consensus       156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            6777877665444321  23556666666653

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.87  E-value=4.9e-22  Score=162.06  Aligned_cols=127  Identities=30%  Similarity=0.352  Sum_probs=115.7

Q ss_pred             cchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCC
Q 047713          120 DKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY  199 (329)
Q Consensus       120 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~  199 (329)
                      ++.++++..++|||+++ +.+++++|++|||+|+|++|++++++|+..|+++|++++.+++|+++++++|+++++++.+.
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~   80 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDT   80 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSS
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCc
Confidence            35678899999999995 67999999999999999999999999999999899999999999999999999999998877


Q ss_pred             CchHHHHHHhhhcC-CccEEEEecCC---------------HHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          200 DKPVQQVIADMTNG-GVDRSVECTGS---------------VQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       200 ~~~~~~~~~~~~~~-~~d~Vid~~g~---------------~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +  +.+.+.+++++ ++|++||++|.               ++.++.++++++++ |+++.+|....
T Consensus        81 ~--~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~  144 (195)
T d1kola2          81 P--LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVT  144 (195)
T ss_dssp             C--HHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCS
T ss_pred             C--HHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCC
Confidence            6  88999999988 99999999983               46899999999998 99999997443

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=3.3e-23  Score=168.21  Aligned_cols=126  Identities=18%  Similarity=0.297  Sum_probs=101.6

Q ss_pred             CCCCCcccCCcceEEEEEecCCC-CcCCCCCEEeecCCC-CCCCCCcccCCCCCCCccccccCCCCccccCCccccccCC
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGV-TDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKG   87 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   87 (329)
                      ..++|+++|||++|+|+++|+++ +.+++||||.+.+.. +|+.|.+|+.|+++.|.+.........             
T Consensus        59 ~~~~P~i~GHE~~G~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~-------------  125 (192)
T d1piwa1          59 NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPY-------------  125 (192)
T ss_dssp             CCCSSEECCCCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBC-------------
T ss_pred             CCCCCcCcccccccchhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCccccccccccccccc-------------
Confidence            45789999999999999999998 569999999876654 799999999999999998654311100             


Q ss_pred             CceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEE
Q 047713           88 KPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF  151 (329)
Q Consensus        88 ~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  151 (329)
                        ..+...+|+|+||+++|+.+++++|+++++++|+.+..++.|||+++ ..+++++|++|+|.
T Consensus       126 --~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         126 --EDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             --TTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             --ccccccccceeeEEEeehHHeEECCCCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence              01123468999999999999999999999988654444477999975 67999999999985

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=2.4e-22  Score=161.49  Aligned_cols=118  Identities=24%  Similarity=0.340  Sum_probs=100.9

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCC-CCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCC
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGK   88 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   88 (329)
                      ...+|.++|||++|+|+++|++|+.|++||||++.+.. .|+.|.+|+.|+++.|.+....                   
T Consensus        57 ~~~~P~i~GhE~~G~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~-------------------  117 (175)
T d1llua1          57 KPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT-------------------  117 (175)
T ss_dssp             CCCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEB-------------------
T ss_pred             cccCCcCCCCcceEEEEEeCCCccccccCCEEEeccccccCCccccccCCccccccccccc-------------------
Confidence            34689999999999999999999999999999987655 6999999999999999876542                   


Q ss_pred             ceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEE
Q 047713           89 PIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF  151 (329)
Q Consensus        89 ~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  151 (329)
                         +...+|+|+||+++++++++++|++++++.++++..++.|+++.+ + +...+|++|||+
T Consensus       118 ---G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~~~-~-~g~~~G~~VLVl  175 (175)
T d1llua1         118 ---GYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM-R-AGQIEGRIVLEM  175 (175)
T ss_dssp             ---TTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHHHH-H-TTCCSSEEEEEC
T ss_pred             ---ccccccccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHHHH-H-hCCCCCCEEEeC
Confidence               123457999999999999999999999998888888888888864 3 334579999984

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.86  E-value=5.2e-24  Score=170.77  Aligned_cols=121  Identities=21%  Similarity=0.196  Sum_probs=94.1

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .++|+++|||++|+|+++|++|++|++||||++.+..+|++|.+|+.|+++.|.+.......|                 
T Consensus        51 ~~~P~i~GhE~~G~V~~vG~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g-----------------  113 (177)
T d1jqba1          51 DRKNMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFS-----------------  113 (177)
T ss_dssp             CCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBT-----------------
T ss_pred             CCCCccCcceeeEEeeecccccceecCCCcEEEeeeeccccccchhhhhhccccccccccccc-----------------
Confidence            477999999999999999999999999999999999999999999999999998764432211                 


Q ss_pred             eeccccccccccEEeee--ccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHH
Q 047713           91 YHFVGTSTFSEYTVTHV--GCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAA  161 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~--~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai  161 (329)
                        ...+|+|+||+++|.  .+++++|+++++++++...   .+++..+        ++.++|.|+|++|+.++
T Consensus       114 --~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~---~~~~~~~--------~~~vlv~g~gp~gl~aa  173 (177)
T d1jqba1         114 --NFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHV---YHGFDHI--------EEALLLMKDKPKDLIKA  173 (177)
T ss_dssp             --TTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEE---EESGGGH--------HHHHHHHHHCCTTCSEE
T ss_pred             --CCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHH---HHHHHHh--------cCceEEECCCHHHhhee
Confidence              223579999999986  4689999999987765422   2233221        34577777777776543

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.85  E-value=5.9e-23  Score=167.86  Aligned_cols=137  Identities=40%  Similarity=0.727  Sum_probs=110.5

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      ..+|+++|||++|+|+++|++++++++||||++.+..+|+.|.+|..|+++.|++.......| ...++..++..++.+.
T Consensus        59 ~~~P~i~GHE~~G~Vv~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g-~~~~~~~~~~~~~~~~  137 (198)
T d1p0fa1          59 SKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTG-LMADMTSRFTCRGKPI  137 (198)
T ss_dssp             CCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCC-SCTTSCCSEEETTEEE
T ss_pred             cccccccceeeeeeeeecCcccccCcCCCEEEEEeeccccccccccccccccchhhhcccccc-ccCCCceeEeeCCeec
Confidence            478999999999999999999999999999999999999999999999999999765543222 3344556677788777


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcCCHHHH
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGL  158 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~  158 (329)
                      +....+|+|+||+.+++..++++|++++.+.+++..+++.          .+.+++.|||.|+|++|+
T Consensus       138 ~~~~~~g~faey~~v~~~~~~kip~~~~~~~~~~~~~~~~----------~v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         138 YNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLD----------QINKAFELLSSGQGVRSI  195 (198)
T ss_dssp             BCSTTTCCSBSEEEEETTSEEEECTTSCGGGGEEEEECGG----------GHHHHHHHTTTSSCSEEE
T ss_pred             cccCCCccceeeEEecHHHEEECCCCCCHHHHHHhhcchh----------hcCCCCEEEEECCCcceE
Confidence            7777789999999999999999999998776554333322          223455688888888775

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.84  E-value=1.6e-21  Score=159.73  Aligned_cols=137  Identities=44%  Similarity=0.726  Sum_probs=112.4

Q ss_pred             CCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCce
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPI   90 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   90 (329)
                      .++|+++|||++|+|+++|++|+++++||||++.+..+|+.|..|+.|+.+.|.+.......|. ..++..++..+|.+.
T Consensus        59 ~~~P~i~GHE~~G~Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~-~~~~~~~~~~~g~~~  137 (198)
T d2jhfa1          59 TPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGT-MQDGTSRFTCRGKPI  137 (198)
T ss_dssp             CCSSBCCCCSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCS-CTTSCCSEEETTEEE
T ss_pred             cccceecccceeEEEEecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCcc-ccCccccccccCcee
Confidence            3689999999999999999999999999999999999999999999999999998776554443 344455677788888


Q ss_pred             eeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEE
Q 047713           91 YHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF  151 (329)
Q Consensus        91 ~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  151 (329)
                      +.....|+|+||+++|+.+++++|+.++++.+++...++.+....   ...+++|++|+|.
T Consensus       138 ~~~~~~G~fAEy~~v~~~~~~~~p~~~~~e~l~~~~~~~~~v~~g---~~~l~~G~~VaVi  195 (198)
T d2jhfa1         138 HHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFEKINEG---FDLLRSGESIRTI  195 (198)
T ss_dssp             BCSTTTCCSBSEEEEEGGGEEECCTTSCCGGGEEEEEEGGGHHHH---HHHHHTTCCSEEE
T ss_pred             ccCCCCCcccCeEEeCHHHeEECCCCCCHHHHHHHHHHHHhhhhC---CceeeCCCEEEEE
Confidence            877788999999999999999999999988766555544433222   2345789998886

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.84  E-value=5.2e-22  Score=159.75  Aligned_cols=120  Identities=23%  Similarity=0.326  Sum_probs=94.8

Q ss_pred             CCCCcccCCcceEEEEEecCCCCc-----CCCCCEEeecCCCCCCCCCcccCCCC-CCCccccccCCCCccccCCccccc
Q 047713           11 PLFPRIFGHEAGGIVESVGEGVTD-----LQPGDHVLPVFTGECKECPHCHSEES-NMCDLLRINTDRGVMINDGQSRFS   84 (329)
Q Consensus        11 ~~~P~~~G~e~~G~V~~vG~~v~~-----~~~Gd~V~~~~~~~~~~c~~c~~g~~-~~~~~~~~~~~~g~~~~~~~~~~~   84 (329)
                      .++|+++|||++|+|+++|++|++     +++||+|++.+..+|+.|++|+.|++ +.|.+...+   |+  ..+     
T Consensus        56 ~~~P~vlGHE~~G~V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~---G~--~~~-----  125 (184)
T d1vj0a1          56 VPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY---GI--NRG-----  125 (184)
T ss_dssp             CCSSBCCCCEEEEEEEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEET---TT--TCC-----
T ss_pred             cccccccceeeeeeeeEEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceee---cc--CCC-----
Confidence            368999999999999999999864     67999999999999999999999986 458876653   11  111     


Q ss_pred             cCCCceeeccccccccccEEee-eccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEE
Q 047713           85 IKGKPIYHFVGTSTFSEYTVTH-VGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF  151 (329)
Q Consensus        85 ~~~~~~~~~~~~g~~a~~~~v~-~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  151 (329)
                          +......+|+|+||++++ +.+++++|+++++++      ++++|+++ .+.+.+++|++|||+
T Consensus       126 ----~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~~------pl~~A~~a-~~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         126 ----CSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL------PLKEANKA-LELMESREALKVILY  182 (184)
T ss_dssp             ----SSSTTCCCSSSBSEEEECTTCCEEEECTTCCEEE------EGGGHHHH-HHHHHHTSCSCEEEE
T ss_pred             ----CCCCCCcceeCcCcEEechhHcEEECCCCCCHHH------HHHHHHHH-HHHhCCCcCCEEEEe
Confidence                011112368999999996 579999999998763      35677777 467889999999997

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=6.5e-22  Score=158.42  Aligned_cols=149  Identities=13%  Similarity=0.164  Sum_probs=118.7

Q ss_pred             CCccchhcccccccchhhhhh---hccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce
Q 047713          117 APLDKVCVLSCGISTGFGATV---NVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE  192 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~  192 (329)
                      +|+.+||++++++.|||++++   +.....++++|||+|+ |++|++++|+||.+|+ +|+++++++++.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            578899999999999998753   3344455679999976 9999999999999999 7999999999999999999999


Q ss_pred             eeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeee
Q 047713          193 FVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFF  272 (329)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~  272 (329)
                      ++++++.+  +.   +.+.....|.|+|++|. ..+..++++++++ |+++.+|...+.........++.|++++.|+..
T Consensus        80 vi~~~~~~--~~---~~l~~~~~~~vvD~Vgg-~~~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~~~  152 (177)
T d1o89a2          80 VLPRDEFA--ES---RPLEKQVWAGAIDTVGD-KVLAKVLAQMNYG-GCVAACGLAGGFTLPTTVMPFILRNVRLQGVDS  152 (177)
T ss_dssp             EEEGGGSS--SC---CSSCCCCEEEEEESSCH-HHHHHHHHTEEEE-EEEEECCCTTCSCCCCCSHHHHHHCCEEEECCS
T ss_pred             ccccccHH--HH---HHHHhhcCCeeEEEcch-HHHHHHHHHhccc-cceEeecccCCccccccHHHHHHCCCeEEEEec
Confidence            99887654  21   23333468999999975 6899999999998 999999976554322222345678999999754


Q ss_pred             c
Q 047713          273 G  273 (329)
Q Consensus       273 ~  273 (329)
                      .
T Consensus       153 ~  153 (177)
T d1o89a2         153 V  153 (177)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.83  E-value=4.6e-21  Score=154.23  Aligned_cols=117  Identities=22%  Similarity=0.283  Sum_probs=94.8

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      ..++|+++|||++|+|+++|+++++|++||||++.+..+|+.|.+|+.|+++.|.+....                    
T Consensus        59 ~~~~P~v~GhE~~G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~--------------------  118 (177)
T d1jvba1          59 GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL--------------------  118 (177)
T ss_dssp             CCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEB--------------------
T ss_pred             ccCCCccccceEEEEEeeeccCccccccCceEeeeeccccccccccccccccccCCccee--------------------
Confidence            347899999999999999999999999999999999999999999999999999875542                    


Q ss_pred             eeeccccccccccEEeeecc-EEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEE
Q 047713           90 IYHFVGTSTFSEYTVTHVGC-VAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAI  150 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~-~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI  150 (329)
                        +...+|+|+||+++++.. ++++|+..+.+.++....++.+++++ .+..++ .|++|||
T Consensus       119 --g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~a~~~-~~~~~~-~G~~VlI  176 (177)
T d1jvba1         119 --GINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDN-LENFKA-IGRQVLI  176 (177)
T ss_dssp             --TTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHHHHHH-HHTTCC-CSEEEEE
T ss_pred             --eeccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHHHHHH-HHhhcc-cCCceEC
Confidence              122357999999997654 66777655555544445688888887 455665 5899987

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.81  E-value=2.1e-20  Score=149.55  Aligned_cols=119  Identities=29%  Similarity=0.427  Sum_probs=95.9

Q ss_pred             CCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCC-CCCCCCcccCCCCCCCccccccCCCCccccCCccccccCC
Q 047713            9 QTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTG-ECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKG   87 (329)
Q Consensus         9 ~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   87 (329)
                      ....+|+++|||++|+|+++|++++.+++||||++.+.. .|+.|..|..++.+.|.+....                  
T Consensus        51 ~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------  112 (171)
T d1rjwa1          51 VKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA------------------  112 (171)
T ss_dssp             SCCCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEB------------------
T ss_pred             cccccccccCCEEEEEEEEecccccCceeeeEEeeccccccccccccccCCCcccccccccc------------------
Confidence            455789999999999999999999999999999886654 6999999999999999875542                  


Q ss_pred             CceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC
Q 047713           88 KPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL  153 (329)
Q Consensus        88 ~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga  153 (329)
                          +...+|+|+||+++|+++++++|++++++.| ++. ...++++.+ ....+ +|++|||+|.
T Consensus       113 ----g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A-~l~-~~~~~~~~~-~~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         113 ----GYSVDGGYAEYCRAAADYVVKIPDNTIIEVQ-PLE-KINEVFDRM-LKGQI-NGRVVLTLED  170 (171)
T ss_dssp             ----TTTBCCSSBSEEEEEGGGCEECCTTCCEEEE-EGG-GHHHHHHHH-HTTCC-SSEEEEECCC
T ss_pred             ----ceeccCccccceEecHHHEEECCCCCCHHHH-HHH-HHHHHHHHH-HhcCC-CCCEEEEeCC
Confidence                1223589999999999999999999998764 443 345666654 33455 5999999874

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.81  E-value=5.8e-21  Score=151.36  Aligned_cols=138  Identities=18%  Similarity=0.147  Sum_probs=108.2

Q ss_pred             cccchhhh---hhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchH
Q 047713          128 GISTGFGA---TVNVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPV  203 (329)
Q Consensus       128 ~~~ta~~~---l~~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~  203 (329)
                      ++.|||.+   |.+....+++++|||+|+ |++|++++|+||.+|+ +|++++++++|.++++++|++.++++++    +
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~----~   78 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED----V   78 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH----H
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc----h
Confidence            34566644   455566778899999986 9999999999999999 8999999999999999999999987643    1


Q ss_pred             HHHHHhhhc-CCccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCCCCccccccccccccceEEEeee
Q 047713          204 QQVIADMTN-GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFF  272 (329)
Q Consensus       204 ~~~~~~~~~-~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~  272 (329)
                      .......+. +++|+|||++|+ +.++.++++|+++ |+++.+|...+.........++.|++++.|...
T Consensus        79 ~~~~~~~~~~~gvd~vid~vgg-~~~~~~~~~l~~~-G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~  146 (167)
T d1tt7a2          79 YDGTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTGGGEVPATVYPFILRGVSLLGIDS  146 (167)
T ss_dssp             CSSCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSSCSCEEECSHHHHTSCCEEEECCS
T ss_pred             hchhhhcccCCCceEEEecCcH-HHHHHHHHHhccC-ceEEEeeccCCCcccCCHHHHHHCCcEEEEEec
Confidence            112223333 499999999986 6899999999998 999999987664332333445789999999653

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1e-19  Score=141.80  Aligned_cols=96  Identities=18%  Similarity=0.288  Sum_probs=86.5

Q ss_pred             CCCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCC
Q 047713            8 GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKG   87 (329)
Q Consensus         8 ~~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   87 (329)
                      ...+.+|.++|||++|+|+++|+++++|++||||++.+..                                        
T Consensus        55 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~----------------------------------------   94 (150)
T d1yb5a1          55 SRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTI----------------------------------------   94 (150)
T ss_dssp             SCCCCSSBCCCSCEEEEEEEECTTCTTCCTTCEEEESCCS----------------------------------------
T ss_pred             CccccccccCccceeeeeEeecceeeccccCccccccccc----------------------------------------
Confidence            3445789999999999999999999999999999865321                                        


Q ss_pred             CceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEE
Q 047713           88 KPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF  151 (329)
Q Consensus        88 ~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  151 (329)
                              +|+|+||+++|+++++++|+++++++||++++++.|+|++++.....+.|+++||+
T Consensus        95 --------~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          95 --------SGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             --------SCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             --------cccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence                    47999999999999999999999999999999999999998888899999999973

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=8e-20  Score=146.47  Aligned_cols=110  Identities=25%  Similarity=0.336  Sum_probs=81.9

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCC-CCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCC
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFT-GECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGK   88 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   88 (329)
                      ...+|+++|||++|+|+++|++|+++++||||.+.+. .+|+.|.+|+.|+++.|.+...... +....           
T Consensus        51 ~~~~P~i~GhE~~G~V~~vG~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~-~~~~~-----------  118 (179)
T d1uufa1          51 GTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYN-SPTPD-----------  118 (179)
T ss_dssp             CCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTT-SBCSS-----------
T ss_pred             cccccccccccccccchhhccccccCCCCCEEEEcccccccCccccccCcccccCCCcccccc-ccCCC-----------
Confidence            4578999999999999999999999999999987664 4899999999999999998653211 11000           


Q ss_pred             ceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhh
Q 047713           89 PIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGAT  136 (329)
Q Consensus        89 ~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l  136 (329)
                        .....+|+|+||+++|++++++||+.....   .+..++.++++++
T Consensus       119 --~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~---~~a~~l~~a~~a~  161 (179)
T d1uufa1         119 --EPGHTLGGYSQQIVVHERYVLRIRVADIEM---IRADQINEAYERM  161 (179)
T ss_dssp             --TTSBCCCSSBSEEEEEGGGCEECCCCCEEE---ECGGGHHHHHHHH
T ss_pred             --CCcccccccceEEEechHHEEECCCCCcCh---hHhchhHHHHHHH
Confidence              011125799999999999999999654322   2223455667653

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=1.4e-17  Score=129.24  Aligned_cols=92  Identities=24%  Similarity=0.326  Sum_probs=76.3

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      .+.+|.++|||++|+|+++|++|++|++||||+...                                            
T Consensus        53 ~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~~~~--------------------------------------------   88 (147)
T d1qora1          53 PPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQ--------------------------------------------   88 (147)
T ss_dssp             CSSSSBCCCSCEEEEEEEECTTCCSCCTTCEEEESC--------------------------------------------
T ss_pred             CCcceeeeccccccceeeeeeecccccccceeeeec--------------------------------------------
Confidence            347899999999999999999999999999997431                                            


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchh--cccccccchhhhhhhccCCCCCCeEEE
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVC--VLSCGISTGFGATVNVAKPKKGQSVAI  150 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa--~~~~~~~ta~~~l~~~~~~~~g~~VlI  150 (329)
                          ...|+|+||+.++.+.++++|+++++++++  +++....++++++.+ .++++|++|||
T Consensus        89 ----~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1          89 ----SALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             ----CSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             ----cccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence                124799999999999999999999887554  456666677776554 67899999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.61  E-value=3.6e-16  Score=121.80  Aligned_cols=97  Identities=15%  Similarity=0.150  Sum_probs=79.8

Q ss_pred             CCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCC
Q 047713            9 QTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGK   88 (329)
Q Consensus         9 ~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   88 (329)
                      ..+.+|+++|+|++|+|++  ++++.|++||+|+.....                                         
T Consensus        56 ~~~~~p~v~g~e~~G~v~~--~~~~~~~~g~~v~~~~~~-----------------------------------------   92 (152)
T d1xa0a1          56 IVKTYPFVPGIDLAGVVVS--SQHPRFREGDEVIATGYE-----------------------------------------   92 (152)
T ss_dssp             SCCSSSBCCCSEEEEEEEE--CCSSSCCTTCEEEEESTT-----------------------------------------
T ss_pred             ccccccceeeeeeeeeeec--cCCCccccCCEEEEecCc-----------------------------------------
Confidence            3457899999999999998  667889999999865211                                         


Q ss_pred             ceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEc
Q 047713           89 PIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFG  152 (329)
Q Consensus        89 ~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G  152 (329)
                        .....+|+|+||+++|++.++++|++++. ++|+++++..|++.++....+++ |++|||+|
T Consensus        93 --~~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1          93 --IGVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             --BTTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             --cccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence              01122589999999999999999999984 68889999999998888888876 99999975

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.57  E-value=1.1e-15  Score=115.47  Aligned_cols=80  Identities=18%  Similarity=0.198  Sum_probs=70.0

Q ss_pred             CCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCC
Q 047713            9 QTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGK   88 (329)
Q Consensus         9 ~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   88 (329)
                      ..+.+|+++|||++|+|           +||||+...                                           
T Consensus        51 ~~~~~P~v~G~E~~G~V-----------vGd~V~~~~-------------------------------------------   76 (131)
T d1iz0a1          51 TRLHPPFIPGMEVVGVV-----------EGRRYAALV-------------------------------------------   76 (131)
T ss_dssp             SCCCSSBCCCCEEEEEE-----------TTEEEEEEC-------------------------------------------
T ss_pred             ccccceeEeeeeeEEee-----------ccceEEEEe-------------------------------------------
Confidence            34578999999999999           399998642                                           


Q ss_pred             ceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEE
Q 047713           89 PIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAI  150 (329)
Q Consensus        89 ~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI  150 (329)
                            .+|+|+||+.+++++++++|+++++++||++++++.|||++|.++++  .|++||+
T Consensus        77 ------~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g~--~g~tvl~  130 (131)
T d1iz0a1          77 ------PQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRGH--TGKVVVR  130 (131)
T ss_dssp             ------SSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTTC--CBEEEEE
T ss_pred             ------ccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhccc--CCCEEEE
Confidence                  13799999999999999999999999999999999999999877664  5999986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.51  E-value=5.1e-15  Score=99.78  Aligned_cols=73  Identities=16%  Similarity=0.195  Sum_probs=65.6

Q ss_pred             CCccchhcccccccchhhhhh---hccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 047713          117 APLDKVCVLSCGISTGFGATV---NVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV  190 (329)
Q Consensus       117 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~  190 (329)
                      +|++|++++++++.|||.+++   +....+++++|||+|+ |++|.+++|+++.+|+ +|+++++++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            578999999999999998754   4566789999999976 9999999999999999 89999999999999999985

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.49  E-value=1.1e-15  Score=120.24  Aligned_cols=98  Identities=16%  Similarity=0.166  Sum_probs=78.9

Q ss_pred             CCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCc
Q 047713           10 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKP   89 (329)
Q Consensus        10 ~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   89 (329)
                      .+.+|.++|+|++|+|++  +.++.+++||+|+......                                         
T Consensus        57 ~~~~~~~~g~e~~G~v~~--~~~~~~~~g~~v~~~~~~~-----------------------------------------   93 (162)
T d1tt7a1          57 VREYPLILGIDAAGTVVS--SNDPRFAEGDEVIATSYEL-----------------------------------------   93 (162)
T ss_dssp             CSSCSEECCSEEEEEEEE--CSSTTCCTTCEEEEESTTB-----------------------------------------
T ss_pred             cccceeeeeeeccccccc--ccccccccceeeEeeeccc-----------------------------------------
Confidence            346789999999999998  5678899999998653210                                         


Q ss_pred             eeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhhccCCCCCCeEEEEcC
Q 047713           90 IYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFGL  153 (329)
Q Consensus        90 ~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga  153 (329)
                        +...+|+|+||+++|+++++++|+++|+++||++++.+.|||.++.. .+...+++|||+|+
T Consensus        94 --g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~-~~~~~~~~Vli~ga  154 (162)
T d1tt7a1          94 --GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLE-ETPGALKDILQNRI  154 (162)
T ss_dssp             --TTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECST-THHHHHHHTTTTCC
T ss_pred             --eeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECC
Confidence              11235799999999999999999999999999999999999987443 34455677888765

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.47  E-value=3.9e-14  Score=109.01  Aligned_cols=83  Identities=13%  Similarity=0.065  Sum_probs=68.0

Q ss_pred             CCCCCCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCC
Q 047713            8 GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKG   87 (329)
Q Consensus         8 ~~~~~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   87 (329)
                      ...+.+|+++|+|++|+|+++|.  ..+++||+|++....                                        
T Consensus        52 ~~~~~~p~v~G~e~~G~V~~~~~--~~~~~g~~v~~~~~~----------------------------------------   89 (146)
T d1o89a1          52 KIIRNFPMIPGIDFAGTVRTSED--PRFHAGQEVLLTGWG----------------------------------------   89 (146)
T ss_dssp             SCCCSSSBCCCSEEEEEEEEECS--TTCCTTCEEEEECTT----------------------------------------
T ss_pred             ccccccceeccccccccceeecc--CCccceeeEEeeccc----------------------------------------
Confidence            34457899999999999999766  479999999865311                                        


Q ss_pred             CceeeccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhh
Q 047713           88 KPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGA  135 (329)
Q Consensus        88 ~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~  135 (329)
                         .+...+|+|+||+++|+++++++|+++|+++||++++++.||+..
T Consensus        90 ---~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~  134 (146)
T d1o89a1          90 ---VGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAII  134 (146)
T ss_dssp             ---BTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHH
T ss_pred             ---ceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence               011235899999999999999999999999999999988888664

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.46  E-value=8.2e-16  Score=122.85  Aligned_cols=101  Identities=18%  Similarity=0.057  Sum_probs=84.2

Q ss_pred             CCCcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCcee
Q 047713           12 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIY   91 (329)
Q Consensus        12 ~~P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   91 (329)
                      .+|.++|+|++|+|+++|.+++.++.||+|.....                                             
T Consensus        71 ~~~~v~G~e~~g~V~~~~~~~~~~~~g~~v~~~~~---------------------------------------------  105 (175)
T d1gu7a1          71 EPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHV---------------------------------------------  105 (175)
T ss_dssp             SCBEECCSCCEEEEEEECTTCCSCCTTCEEEESSS---------------------------------------------
T ss_pred             CCCcccccccccccccccccccccccccceecccc---------------------------------------------
Confidence            67899999999999999999999999999985432                                             


Q ss_pred             eccccccccccEEeeeccEEEcCCCCCccchhcccccccchhhhhhh-ccCCCCCCeEEEEc-C-CHHHHHHHH
Q 047713           92 HFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVN-VAKPKKGQSVAIFG-L-GAVGLAAAE  162 (329)
Q Consensus        92 ~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~g~~VlI~G-a-g~iG~aai~  162 (329)
                         ..|+|+||+.+|+++++++|++++  +.+++.+...|||+++.. ..++++|++|||+| + |++|++++|
T Consensus       106 ---~~g~~aey~~v~~~~~~~iP~~~~--~~~a~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         106 ---NFGTWRTHALGNDDDFIKLPNPAQ--SKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             ---CCCCSBSEEEEEGGGEEEECCHHH--HHHTTCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             ---ccccccceeeehhhhccCCCccch--hhhhccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence               247899999999999999999765  444456677888887654 46799999999996 4 779988776

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.68  E-value=2.4e-08  Score=75.73  Aligned_cols=81  Identities=15%  Similarity=0.094  Sum_probs=60.7

Q ss_pred             CcccCCcceEEEEEecCCCCcCCCCCEEeecCCCCCCCCCcccCCCCCCCccccccCCCCccccCCccccccCCCceeec
Q 047713           14 PRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHF   93 (329)
Q Consensus        14 P~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   93 (329)
                      .-++..+.+|+|++  |++++|++||+|+..                                                 
T Consensus        60 g~~~~g~~vg~Vv~--S~~~~f~~GD~V~g~-------------------------------------------------   88 (147)
T d1v3va1          60 GAVMMGQQVARVVE--SKNSAFPAGSIVLAQ-------------------------------------------------   88 (147)
T ss_dssp             TSBCCCCEEEEEEE--ESCTTSCTTCEEEEC-------------------------------------------------
T ss_pred             CCccccceEEEEEE--eCCCcccCCCEEEEc-------------------------------------------------
Confidence            34566688999988  778899999999854                                                 


Q ss_pred             cccccccccEEeeeccEEEcCCCCCcc-----chhcccccccch-hhhhhhccCCCCCCeEEE
Q 047713           94 VGTSTFSEYTVTHVGCVAKINPAAPLD-----KVCVLSCGISTG-FGATVNVAKPKKGQSVAI  150 (329)
Q Consensus        94 ~~~g~~a~~~~v~~~~~~~~p~~~~~~-----~aa~~~~~~~ta-~~~l~~~~~~~~g~~VlI  150 (329)
                         ++|+||.+++.+.+.++|++++..     ..+++.....|| |..++...  +.|++|++
T Consensus        89 ---~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~~~--k~Getvv~  146 (147)
T d1v3va1          89 ---SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLNGA--NLGKAVVT  146 (147)
T ss_dssp             ---CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHHTTC--CSSEEEEE
T ss_pred             ---cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhhCCC--CCCCEEEe
Confidence               589999999999999998765432     345566666664 44555544  56999987

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.81  E-value=2.6e-05  Score=59.24  Aligned_cols=98  Identities=24%  Similarity=0.185  Sum_probs=70.0

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +.-+|+|+|+|..|+.|++.|+.+|+ .|.+.+.+.++++.++......+.........+.+.++     ..|+||.++-
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-----~aDivI~aal  104 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVA-----EADLLIGAVL  104 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHH-----TCSEEEECCC
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhc-----cCcEEEEeee
Confidence            35689999999999999999999999 99999999999998887643221111111111333333     3799998874


Q ss_pred             CHH------HHHHHHHhhccCCeEEEEeccC
Q 047713          224 SVQ------AMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       224 ~~~------~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      .+-      .-+..++.++++ ..++++..-
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~G-SVIVDvaid  134 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTG-SVIVDVAVD  134 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTT-CEEEETTCT
T ss_pred             cCCcccCeeecHHHHhhcCCC-cEEEEeecC
Confidence            221      235777889998 999999753

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.79  E-value=0.00011  Score=56.41  Aligned_cols=100  Identities=17%  Similarity=0.203  Sum_probs=71.0

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCC------------------chHHHH
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYD------------------KPVQQV  206 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~------------------~~~~~~  206 (329)
                      .-+|+|+|+|.+|+.|+..|+.+|+ .|.+.+.+.++++.+++++...+....+..                  ....+.
T Consensus        29 pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~  107 (183)
T d1l7da1          29 PARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA  107 (183)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHH
T ss_pred             CcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHH
Confidence            4589999999999999999999999 999999999999999999875542111000                  001122


Q ss_pred             HHhhhcCCccEEEEecCCHH------HHHHHHHhhccCCeEEEEecc
Q 047713          207 IADMTNGGVDRSVECTGSVQ------AMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       207 ~~~~~~~~~d~Vid~~g~~~------~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +.+.. ...|+||-++-.+.      .-+..++.++++ ..++++..
T Consensus       108 l~~~l-~~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvai  152 (183)
T d1l7da1         108 VLKEL-VKTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAV  152 (183)
T ss_dssp             HHHHH-TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTG
T ss_pred             HHHHH-HhhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEee
Confidence            22222 15899997764211      246778889998 99999965

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.61  E-value=0.00011  Score=60.31  Aligned_cols=80  Identities=25%  Similarity=0.287  Sum_probs=59.3

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhc--CCccEE
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTN--GGVDRS  218 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~--~~~d~V  218 (329)
                      -+|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+++++...+ .|..+. ++..+.+.+...  +++|++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~G~iDiL   80 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLEDE-RERVRFVEEAAYALGRVDVL   80 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTCH-HHHHHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHHHHhcCCCCeE
Confidence            35899999986 9999999999999999 89999999988888888876543 233322 223344444332  479999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      ++++|.
T Consensus        81 VnnAG~   86 (248)
T d2d1ya1          81 VNNAAI   86 (248)
T ss_dssp             EECCCC
T ss_pred             EEeCcC
Confidence            998873

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.57  E-value=1.4e-05  Score=64.05  Aligned_cols=110  Identities=17%  Similarity=0.193  Sum_probs=74.2

Q ss_pred             ccccccchhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceeeCCCCCC
Q 047713          125 LSCGISTGFGATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTEFVNPKDYD  200 (329)
Q Consensus       125 ~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~  200 (329)
                      +..+...|.  +.+.+.+++|++||.+|+|. |..++.+++..|. +|++++.+++-.+.+    +++|.+.+..... +
T Consensus        61 is~P~~~a~--ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g-d  135 (215)
T d1jg1a_          61 VSAPHMVAI--MLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG-D  135 (215)
T ss_dssp             ECCHHHHHH--HHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-C
T ss_pred             hhhhhhHHH--HHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEEC-c
Confidence            333444443  56778999999999999864 8888888888785 799999988655544    4567654332211 1


Q ss_pred             chHHHHHHhhh-cCCccEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713          201 KPVQQVIADMT-NGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       201 ~~~~~~~~~~~-~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                        .   ..-.. .+.||.|+-..+....-+..++.|+++ |+++..
T Consensus       136 --~---~~g~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p  175 (215)
T d1jg1a_         136 --G---SKGFPPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  175 (215)
T ss_dssp             --G---GGCCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             --c---ccCCcccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence              1   01111 237999987766555556778899998 999875

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.54  E-value=8.6e-06  Score=65.53  Aligned_cols=102  Identities=21%  Similarity=0.221  Sum_probs=70.4

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      +.+.+++++|++||-+|+|. |..++.+|+..|. .+|++++.+++..+.+++    .+...+.... .+  .   ....
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~-~d--~---~~~~  139 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVC-GD--G---YYGV  139 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE-SC--G---GGCC
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhccccccccc-Cc--h---HHcc
Confidence            56788999999999999875 8888889987763 389999999988776654    3433222111 11  0   0111


Q ss_pred             h-cCCccEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713          211 T-NGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       211 ~-~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      . .+.||+|+...+.....+..++.|+++ |+++..
T Consensus       140 ~~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~p  174 (213)
T d1dl5a1         140 PEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  174 (213)
T ss_dssp             GGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEE
T ss_pred             ccccchhhhhhhccHHHhHHHHHHhcCCC-cEEEEE
Confidence            1 236999997766544456778899998 998874

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.47  E-value=0.00013  Score=59.78  Aligned_cols=103  Identities=14%  Similarity=0.160  Sum_probs=68.2

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cC-CceeeCCCCCCchHHHHHHh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FG-VTEFVNPKDYDKPVQQVIAD  209 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg-~~~~~~~~~~~~~~~~~~~~  209 (329)
                      +...+.++||++||-.|+|. |.+++.+|+..+. .+|++++.+++..+.+++    ++ ...+- ....+  +    .+
T Consensus        77 Ii~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~-~~~~D--i----~~  148 (250)
T d1yb2a1          77 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVR-TSRSD--I----AD  148 (250)
T ss_dssp             ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEE-EECSC--T----TT
T ss_pred             HHHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceE-EEEee--e----ec
Confidence            45678999999999998864 7788888887653 389999999998887764    22 22111 11111  1    12


Q ss_pred             hhcC-CccEEE-EecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          210 MTNG-GVDRSV-ECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       210 ~~~~-~~d~Vi-d~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .... .+|.|+ |.-.....++.+.+.|+++ |+++.+..
T Consensus       149 ~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~P  187 (250)
T d1yb2a1         149 FISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  187 (250)
T ss_dssp             CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             ccccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEeC
Confidence            2223 799887 4433445788999999998 99988743

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.45  E-value=0.0003  Score=53.86  Aligned_cols=73  Identities=16%  Similarity=0.135  Sum_probs=55.1

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCc
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGV  215 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (329)
                      ++..++.++.+|+|+|+|+++.+++..++..|++++..+.++.++.+.+ +.++...+-....              ..+
T Consensus         9 l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~~--------------~~~   74 (167)
T d1npya1           9 IEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLEN--------------QQA   74 (167)
T ss_dssp             HHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCTT--------------CCC
T ss_pred             HHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcccc--------------cch
Confidence            4556667789999999999999999999999988888898998877654 4455443322111              258


Q ss_pred             cEEEEecC
Q 047713          216 DRSVECTG  223 (329)
Q Consensus       216 d~Vid~~g  223 (329)
                      |+|++|+.
T Consensus        75 DliINaTp   82 (167)
T d1npya1          75 DILVNVTS   82 (167)
T ss_dssp             SEEEECSS
T ss_pred             hhheeccc
Confidence            99999974

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.45  E-value=0.00029  Score=57.41  Aligned_cols=79  Identities=27%  Similarity=0.382  Sum_probs=56.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCcee-eCCCCCCchHHHHHHhhhc--CCccEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEF-VNPKDYDKPVQQVIADMTN--GGVDRS  218 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~-~~~~~~~~~~~~~~~~~~~--~~~d~V  218 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+. ++..+.+++...  +++|++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~iDil   81 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVADP-ASVERGFAEALAHLGRLDGV   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTCH-HHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCCH-HHHHHHHHHHHHhcCCceEE
Confidence            4899999986 9999999999999999 899999998887664 45665433 233332 234444443332  379999


Q ss_pred             EEecCC
Q 047713          219 VECTGS  224 (329)
Q Consensus       219 id~~g~  224 (329)
                      ++++|.
T Consensus        82 VnnAG~   87 (242)
T d1ulsa_          82 VHYAGI   87 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998874

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.38  E-value=0.0007  Score=55.42  Aligned_cols=103  Identities=17%  Similarity=0.220  Sum_probs=69.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCceee---CCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTEFV---NPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~~~---~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+. .++++.....   |..+. .+..+.+++...  +++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g~iD   82 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSE-ADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCH-HHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCH-HHHHHHHHHHHHHhCCCC
Confidence            5889999986 9999999999999999 89999999887765 5567654433   22221 223333333322  4799


Q ss_pred             EEEEecCCH----------H---------------HHHHHHHhhccCCeEEEEeccC
Q 047713          217 RSVECTGSV----------Q---------------AMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       217 ~Vid~~g~~----------~---------------~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +++++.|..          +               ..+.++..++..+|+++.++..
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~  139 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV  139 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccch
Confidence            999999842          1               2344455565434999988753

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.0014  Score=53.33  Aligned_cols=77  Identities=19%  Similarity=0.383  Sum_probs=54.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce--eeCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE--FVNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++++...  .+|..+.+ +..+.+.++  +++|+++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~--g~iDilV   81 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDWE-ATERALGSV--GPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHH-HHHHHHTTC--CCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHH-HHHHHHHHh--CCceEEE
Confidence            5899999986 9999999999999999 899999998887654 4554322  23433321 222222221  3799999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      ++.|.
T Consensus        82 nnAg~   86 (244)
T d1pr9a_          82 NNAAV   86 (244)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            98874

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.19  E-value=0.00081  Score=50.82  Aligned_cols=73  Identities=19%  Similarity=0.241  Sum_probs=55.1

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF-NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      -.+.+|||+|+|.+|.+++..+...|++.+..+.++.++. +++++++.. .....+    +.+.+.     .+|+||.|
T Consensus        22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~~----~~~~l~-----~~Divi~a   91 (159)
T d1gpja2          22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFDE----LVDHLA-----RSDVVVSA   91 (159)
T ss_dssp             CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGGG----HHHHHH-----TCSEEEEC
T ss_pred             cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccchh----HHHHhc-----cCCEEEEe
Confidence            4688999999999999999999889997888888887765 467778754 332222    444333     48999999


Q ss_pred             cCCH
Q 047713          222 TGSV  225 (329)
Q Consensus       222 ~g~~  225 (329)
                      ++++
T Consensus        92 tss~   95 (159)
T d1gpja2          92 TAAP   95 (159)
T ss_dssp             CSSS
T ss_pred             cCCC
Confidence            9754

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.17  E-value=0.00092  Score=55.81  Aligned_cols=102  Identities=15%  Similarity=0.185  Sum_probs=70.4

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.+.+++++|++||=+|+|- |-.++.+|+..|+ +|++++.+++..+.+    ++.|....+.....+  +     ...
T Consensus        53 ~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d--~-----~~~  123 (291)
T d1kpia_          53 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG--W-----EEF  123 (291)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECC--G-----GGC
T ss_pred             HHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhhhc--c-----ccc
Confidence            56889999999999999863 5567889988998 899999999876654    445543322221111  1     112


Q ss_pred             cCCccEEE-----EecCC----------HHHHHHHHHhhccCCeEEEEecc
Q 047713          212 NGGVDRSV-----ECTGS----------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~~~~d~Vi-----d~~g~----------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+.||.|+     +.++.          ...++.+.++|+|+ |+++.-..
T Consensus       124 ~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~i  173 (291)
T d1kpia_         124 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTI  173 (291)
T ss_dssp             CCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEEE
T ss_pred             ccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEEE
Confidence            34799875     34332          35678888999998 99886543

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.17  E-value=0.00084  Score=55.31  Aligned_cols=103  Identities=21%  Similarity=0.234  Sum_probs=72.2

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      +...++++||++||-.|+|. |..++.+|+..+. .+|++++.+++..+.+++    ++....+.....+      +.+.
T Consensus        95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d------~~~~  167 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD------ISEG  167 (266)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC------GGGC
T ss_pred             HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecc------cccc
Confidence            56788999999999998875 7888889988753 289999999998877654    4542222111111      1111


Q ss_pred             hcC-CccEEEEecCC-HHHHHHHHHhhccCCeEEEEec
Q 047713          211 TNG-GVDRSVECTGS-VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       211 ~~~-~~d~Vid~~g~-~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ... .+|.|+--... ...++.+.++|+++ |+++.+.
T Consensus       168 ~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~  204 (266)
T d1o54a_         168 FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC  204 (266)
T ss_dssp             CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEe
Confidence            223 68887655544 45789999999998 9998764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.16  E-value=0.0014  Score=53.67  Aligned_cols=80  Identities=21%  Similarity=0.292  Sum_probs=55.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCC--chHHHHHHhhhcC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYD--KPVQQVIADMTNG  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~--~~~~~~~~~~~~~  213 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.    +++.+...   ..|..+.+  ..+.+.+.+..++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            5899999986 9999999999999999 89999999877553    34455433   22333322  1122333444445


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ..|+++++.|.
T Consensus        84 ~idilinnag~   94 (258)
T d1ae1a_          84 KLNILVNNAGV   94 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CcEEEeccccc
Confidence            79999998874

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.16  E-value=0.0002  Score=57.53  Aligned_cols=103  Identities=21%  Similarity=0.233  Sum_probs=68.1

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhcCC
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      +.+.+.+++|++||-+|+| .|..++.+|+.. . +|++++.+++..+.+++.-... -+.....+  .....  ...+.
T Consensus        62 ml~~L~l~~g~~VLdIG~G-sGy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d--~~~g~--~~~~p  134 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIGTG-IGYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGD--GTLGY--EEEKP  134 (224)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESC--GGGCC--GGGCC
T ss_pred             HHHHhhhcccceEEEecCC-CCHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccCc--hhhcc--hhhhh
Confidence            4677899999999999987 477777788764 3 8999999999888877642210 00000111  10000  01236


Q ss_pred             ccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          215 VDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       215 ~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ||.|+-+.+.+...+..++.|+++ |+++..-
T Consensus       135 fD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~pv  165 (224)
T d1vbfa_         135 YDRVVVWATAPTLLCKPYEQLKEG-GIMILPI  165 (224)
T ss_dssp             EEEEEESSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             HHHHHhhcchhhhhHHHHHhcCCC-CEEEEEE
Confidence            999886655555556678899998 9988753

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.001  Score=54.29  Aligned_cols=78  Identities=19%  Similarity=0.270  Sum_probs=55.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCce--eeCCCCCCchHHHHHHhhhc--CCccE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTE--FVNPKDYDKPVQQVIADMTN--GGVDR  217 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~--~~~~~~~~~~~~~~~~~~~~--~~~d~  217 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+.+ ++...  ..|..+. ++..+.+++...  +++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~-~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQE-DDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSH-HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCH-HHHHHHHHHHHHhcCCCCE
Confidence            4899999986 9999999999999999 89999999988876554 44322  2233332 234444444332  47999


Q ss_pred             EEEecC
Q 047713          218 SVECTG  223 (329)
Q Consensus       218 Vid~~g  223 (329)
                      +++++|
T Consensus        83 lVnnAG   88 (250)
T d1ydea1          83 VVNNAG   88 (250)
T ss_dssp             EEECCC
T ss_pred             EEeccc
Confidence            999887

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.12  E-value=0.0011  Score=53.93  Aligned_cols=77  Identities=22%  Similarity=0.335  Sum_probs=53.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce--eeCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTE--FVNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+ ++++...  ..|..+.+ ...+.+.++  +++|+++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~--g~iDilV   79 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWD-ATEKALGGI--GPVDLLV   79 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHH-HHHHHHTTC--CCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHH-HHHHHHHHc--CCCeEEE
Confidence            5899999986 9999999999999999 899999988876554 4554322  22333321 222222221  4799999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      +++|.
T Consensus        80 nnAg~   84 (242)
T d1cyda_          80 NNAAL   84 (242)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            98873

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00086  Score=54.58  Aligned_cols=79  Identities=22%  Similarity=0.251  Sum_probs=53.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+.........+....+..+...+.. +++|+++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-ERLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeecccccccccccccc-ccceeEEecc
Confidence            5899999986 9999999999999999 89999999888776555333222111111222333333322 3799999988


Q ss_pred             CC
Q 047713          223 GS  224 (329)
Q Consensus       223 g~  224 (329)
                      |.
T Consensus        83 g~   84 (245)
T d2ag5a1          83 GF   84 (245)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.04  E-value=0.00037  Score=54.56  Aligned_cols=76  Identities=17%  Similarity=0.193  Sum_probs=52.7

Q ss_pred             CCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-c----CC-ceeeCCCCCCchHHHHHHhhhcCC
Q 047713          142 PKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-F----GV-TEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       142 ~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-l----g~-~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      --+|+++||+|+ |++|.+++..+...|+ +|+.+.++.++.+.+.+ +    .. ....+..+     ...+++.. ++
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~-~~   92 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD-----DASRAEAV-KG   92 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS-----HHHHHHHT-TT
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc-----HHHHHHHh-cC
Confidence            346999999986 9999999999999999 89999999887755432 2    11 12222222     12333333 46


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++|++.|.
T Consensus        93 iDilin~Ag~  102 (191)
T d1luaa1          93 AHFVFTAGAI  102 (191)
T ss_dssp             CSEEEECCCT
T ss_pred             cCeeeecCcc
Confidence            8999999873

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.03  E-value=0.00059  Score=55.48  Aligned_cols=103  Identities=24%  Similarity=0.253  Sum_probs=69.9

Q ss_pred             hhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh
Q 047713          135 ATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       135 ~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      .+...++++||++||=+|+|. |..+..+++..|+ .|++++.+++..+.+++    .|....+.....+      +.++
T Consensus        24 ~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d------~~~~   95 (245)
T d1nkva_          24 TLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND------AAGY   95 (245)
T ss_dssp             HHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC------CTTC
T ss_pred             HHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhH------Hhhc
Confidence            366788999999999998763 6667788888898 89999999988776654    3543211111111      1122


Q ss_pred             h-cCCccEEEEec------CCHHHHHHHHHhhccCCeEEEEec
Q 047713          211 T-NGGVDRSVECT------GSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       211 ~-~~~~d~Vid~~------g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      . .+.||+|+-.-      .....+....+.|+|+ |+++...
T Consensus        96 ~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~~  137 (245)
T d1nkva_          96 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  137 (245)
T ss_dssp             CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEEe
Confidence            2 23799987421      1346778888899998 9987764

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00069  Score=54.36  Aligned_cols=103  Identities=17%  Similarity=0.164  Sum_probs=67.1

Q ss_pred             hhhcc--CCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceee----CCCCCCchHH
Q 047713          136 TVNVA--KPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FGVTEFV----NPKDYDKPVQ  204 (329)
Q Consensus       136 l~~~~--~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg~~~~~----~~~~~~~~~~  204 (329)
                      +++..  .+++|++||..|+|. |..++.+|+..|. .+|++++.+++-.+.+++    .+.....    .....+  . 
T Consensus        66 ~le~L~~~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD--~-  141 (224)
T d1i1na_          66 ALELLFDQLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD--G-  141 (224)
T ss_dssp             HHHHTTTTSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC--G-
T ss_pred             HHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEee--c-
Confidence            34444  789999999999874 8888888887663 389999999987766543    2221100    000001  0 


Q ss_pred             HHHHhhh-cCCccEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713          205 QVIADMT-NGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       205 ~~~~~~~-~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                        ..... .+.||+|+-+.......+..++.|+++ |+++..
T Consensus       142 --~~~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p  180 (224)
T d1i1na_         142 --RMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP  180 (224)
T ss_dssp             --GGCCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             --ccccchhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence              01011 127999987766555567788899998 999875

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.99  E-value=0.0011  Score=54.40  Aligned_cols=79  Identities=24%  Similarity=0.357  Sum_probs=56.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCcee---eCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTEF---VNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+. .++++....   .|..+. ++..+.+.+...  +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~-~~v~~~~~~~~~~~g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTDQ-ASIDRCVAELLDRWGSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCCH-HHHHHHHHHHHHHhCCcc
Confidence            4889999986 9999999999999999 89999998877654 566775432   233332 234444444332  4799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      +++++.|.
T Consensus        82 ilVnnAg~   89 (256)
T d1k2wa_          82 ILVNNAAL   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            99999883

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.99  E-value=0.0014  Score=53.27  Aligned_cols=79  Identities=14%  Similarity=0.186  Sum_probs=55.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCcee---eCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTEF---VNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+. .++++....   .|..+. ++..+.+++...  +++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id   82 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQP-AQWKAAVDTAVTAFGGLH   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCCH-HHHHHHHHHHHHHhCCCe
Confidence            5899999986 9999999999999999 89999999888765 455653222   233332 223344444332  3799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++++++|.
T Consensus        83 ilinnAG~   90 (244)
T d1nffa_          83 VLVNNAGI   90 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999884

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.98  E-value=0.0014  Score=53.81  Aligned_cols=79  Identities=23%  Similarity=0.353  Sum_probs=54.6

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.|...   ..|..+. ++..+.+.+...  +
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSE-EAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence            5899999986 9999999999999999 899999998876543    3345432   2233322 223444444332  4


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+++++.|.
T Consensus        82 ~iDilVnnaG~   92 (260)
T d1zema1          82 KIDFLFNNAGY   92 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCeehhhhcc
Confidence            79999998873

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.95  E-value=0.0015  Score=53.87  Aligned_cols=78  Identities=17%  Similarity=0.248  Sum_probs=54.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc---e--eeCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVT---E--FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~---~--~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++++..   .  ..|..+. ++..+.+.+...  +.
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKD-EDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            5899999986 9999999999999999 899999998887653 444431   1  1233322 234444443332  47


Q ss_pred             ccEEEEecC
Q 047713          215 VDRSVECTG  223 (329)
Q Consensus       215 ~d~Vid~~g  223 (329)
                      +|++++++|
T Consensus        83 iD~lVnnAG   91 (268)
T d2bgka1          83 LDIMFGNVG   91 (268)
T ss_dssp             CCEEEECCC
T ss_pred             cceeccccc
Confidence            999999887

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.95  E-value=0.0015  Score=53.47  Aligned_cols=79  Identities=28%  Similarity=0.334  Sum_probs=55.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+. .++++...   ..|..+. ++..+.+.+...  +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~iD   81 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIE-EDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCCH-HHHHHHHHHHHHHcCCcc
Confidence            5899999986 9999999999999999 89999998877665 55666432   2233322 223333333322  3799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++++++|.
T Consensus        82 ilVnnAg~   89 (254)
T d1hdca_          82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEecCcc
Confidence            99998873

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.93  E-value=0.0029  Score=51.78  Aligned_cols=79  Identities=16%  Similarity=0.257  Sum_probs=53.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhh---hc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADM---TN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~---~~  212 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ +..+.+.+.   .+
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~-~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRS-ERQELMNTVANHFH   84 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHH-HHHHHHHHHHHHhC
Confidence            5899999986 9999999999999999 899999988876543    3344322   22333221 233333333   23


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +.+|+++++.|.
T Consensus        85 ~~idilvnnAG~   96 (259)
T d2ae2a_          85 GKLNILVNNAGI   96 (259)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCceEEEECCce
Confidence            369999999883

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.93  E-value=0.002  Score=53.49  Aligned_cols=102  Identities=17%  Similarity=0.173  Sum_probs=70.1

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.+++++++|++||=+|+|- |..++.+|+..|+ +|++++.+++..+++++.    |...-+.....+  +    +++ 
T Consensus        54 ~~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d--~----~~~-  124 (285)
T d1kpga_          54 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG--W----EQF-  124 (285)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC--G----GGC-
T ss_pred             HHHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhh--h----hcc-
Confidence            56788999999999999873 7788889999998 999999999988776553    321111111111  1    111 


Q ss_pred             cCCccEEE-----EecCC---HHHHHHHHHhhccCCeEEEEecc
Q 047713          212 NGGVDRSV-----ECTGS---VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~~~~d~Vi-----d~~g~---~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ++.+|.|+     +.+|.   ...+..+.++|+++ |+++....
T Consensus       125 ~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~~i  167 (285)
T d1kpga_         125 DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  167 (285)
T ss_dssp             CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             cccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEEEE
Confidence            24688764     44442   34677888899998 99876543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.90  E-value=0.00085  Score=54.54  Aligned_cols=79  Identities=24%  Similarity=0.376  Sum_probs=55.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc---eeeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVT---EFVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~---~~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+ ++++..   ...|..+. ++..+.+++...  +++|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTDP-ASIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCH-HHHHHHHHHHHHHTCSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCH-HHhhhhhhhhhcccCCcc
Confidence            4889999986 9999999999999999 899999998887654 455542   22343332 223344444332  4799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      +++++.|.
T Consensus        81 ilVnnAg~   88 (243)
T d1q7ba_          81 ILVNNAGI   88 (243)
T ss_dssp             EEEECCCC
T ss_pred             eehhhhhh
Confidence            99998874

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.89  E-value=0.0019  Score=52.61  Aligned_cols=79  Identities=22%  Similarity=0.441  Sum_probs=54.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-----HHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.     .++.|...   ..|..+. ++..+.+++...  
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY-EEVKKLLEAVKEKF   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCH-HHHHHHHHHHHHHc
Confidence            4889999986 9999999999999999 89999998876543     23455432   2243332 223334443332  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++++++|.
T Consensus        82 g~iDiLVnnAG~   93 (251)
T d1vl8a_          82 GKLDTVVNAAGI   93 (251)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999884

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.83  E-value=0.0031  Score=51.60  Aligned_cols=79  Identities=23%  Similarity=0.244  Sum_probs=53.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHh---hhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIAD---MTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~---~~~  212 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ +..+.+++   ..+
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRP-EREKLMQTVSSMFG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHH-HHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHH-HHHHHHHHHHHHhC
Confidence            4899999986 9999999999999999 899999998776543    2233321   22333221 23333333   334


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +.+|+++++.|.
T Consensus        85 g~idilvnnAG~   96 (259)
T d1xq1a_          85 GKLDILINNLGA   96 (259)
T ss_dssp             TCCSEEEEECCC
T ss_pred             CCcccccccccc
Confidence            569999999985

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.83  E-value=0.0046  Score=49.64  Aligned_cols=72  Identities=21%  Similarity=0.272  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.   ++.+...+. |..+ .  ....+++.  +.+|+++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~~Dv~~-~--~~~~~~~~--g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVVCDLRK-D--LDLLFEKV--KEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEECCTTT-C--HHHHHHHS--CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEEcchHH-H--HHHHHHHh--CCCcEEEec
Confidence            4889999986 9999999999999999 899998877654   455543322 3322 1  33333222  469999998


Q ss_pred             cCC
Q 047713          222 TGS  224 (329)
Q Consensus       222 ~g~  224 (329)
                      +|.
T Consensus        74 AG~   76 (234)
T d1o5ia_          74 AGG   76 (234)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.82  E-value=0.0018  Score=53.63  Aligned_cols=102  Identities=17%  Similarity=0.182  Sum_probs=68.8

Q ss_pred             hhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh
Q 047713          135 ATVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       135 ~l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  210 (329)
                      -+.+.+++++|++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|....+.....+  .    ++ 
T Consensus        43 ~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d--~----~~-  113 (280)
T d2fk8a1          43 LNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG--W----ED-  113 (280)
T ss_dssp             HHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC--G----GG-
T ss_pred             HHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhhhh--h----hh-
Confidence            367788999999999999864 4456778888898 99999999998877654    3432211111111  1    11 


Q ss_pred             hcCCccEEE-----EecCC---HHHHHHHHHhhccCCeEEEEec
Q 047713          211 TNGGVDRSV-----ECTGS---VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       211 ~~~~~d~Vi-----d~~g~---~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ..+.+|.|+     +.++.   +..+....++|+|+ |+++.-.
T Consensus       114 ~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~~  156 (280)
T d2fk8a1         114 FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQS  156 (280)
T ss_dssp             CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEEE
Confidence            134688875     34432   34577888999998 9987754

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.0023  Score=51.85  Aligned_cols=80  Identities=20%  Similarity=0.245  Sum_probs=55.6

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhh--c
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMT--N  212 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~--~  212 (329)
                      -.|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.|...   ..|..+.+ +..+.+++..  .
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~-~v~~~~~~i~~~~   82 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRE-DIYSSAKKVKAEI   82 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHH-HHHHHHHHHHHHc
Confidence            35899999986 9999999999989999 899999999877543    3455432   22333322 2344444332  2


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +.+|++++++|.
T Consensus        83 g~idilinnag~   94 (244)
T d1yb1a_          83 GDVSILVNNAGV   94 (244)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCceeEeeccc
Confidence            379999999884

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.80  E-value=0.0018  Score=53.54  Aligned_cols=78  Identities=22%  Similarity=0.325  Sum_probs=54.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+. .++++...   ..|..+. ++..+.+.+...  +.+|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRSL-EDQKQAASRCVARFGKID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEecccccH-HHHHHHHHHHHHHhCCcc
Confidence            4899999986 9999999999999999 89999999888754 45565432   2233322 123333333332  3799


Q ss_pred             EEEEecC
Q 047713          217 RSVECTG  223 (329)
Q Consensus       217 ~Vid~~g  223 (329)
                      +++++.|
T Consensus        82 ilvnnAG   88 (276)
T d1bdba_          82 TLIPNAG   88 (276)
T ss_dssp             EEECCCC
T ss_pred             ccccccc
Confidence            9999887

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.80  E-value=0.0089  Score=41.94  Aligned_cols=91  Identities=15%  Similarity=-0.005  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP--SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~--~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      |++|||.|+|.+|..-++.+...|+ +|++++...  +...++++-.....-.  ...        +..-.++++|+-+.
T Consensus        12 ~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i~~~~~--~~~--------~~dl~~~~lv~~at   80 (113)
T d1pjqa1          12 DRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGMLTLVEG--PFD--------ETLLDSCWLAIAAT   80 (113)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSCEEEES--SCC--------GGGGTTCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCceeecc--CCC--------HHHhCCCcEEeecC
Confidence            7899999999999999999999999 677665433  3333333322222211  111        00012589999998


Q ss_pred             CCHHHHHHHHHhhccCCeEEEEecc
Q 047713          223 GSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       223 g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +....-.......+.. |.++-+..
T Consensus        81 ~d~~~n~~i~~~a~~~-~ilVNv~D  104 (113)
T d1pjqa1          81 DDDTVNQRVSDAAESR-RIFCNVVD  104 (113)
T ss_dssp             SCHHHHHHHHHHHHHT-TCEEEETT
T ss_pred             CCHHHHHHHHHHHHHc-CCEEEeCC
Confidence            7765555666677776 88877654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.79  E-value=0.0014  Score=53.35  Aligned_cols=80  Identities=14%  Similarity=0.166  Sum_probs=54.1

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHhcCCce----eeCCCCCC--chHHHHHHhhhcC-Cc
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGAS-RIIGVDLNPSRFNEAKKFGVTE----FVNPKDYD--KPVQQVIADMTNG-GV  215 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~-~vv~~~~~~~~~~~~~~lg~~~----~~~~~~~~--~~~~~~~~~~~~~-~~  215 (329)
                      .++|||+|+ +++|.++++.+...|+. +|+.+.+++++.+.+++.....    .+|..+.+  ..+.+.+.+..+. ++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            478999986 99999999988777863 6888888888887777654321    22333221  1233444444444 69


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |++++++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999883

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.79  E-value=0.0024  Score=52.24  Aligned_cols=78  Identities=22%  Similarity=0.286  Sum_probs=53.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcC--Cce---eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFG--VTE---FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg--~~~---~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+.    +.+  ...   ..|..+. ++..+.+.+... 
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~-~~v~~~~~~~~~~   80 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE-AQVEAYVTATTER   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCH-HHHHHHHHHHHHH
Confidence            4889999986 9999999999999999 8999999988765432    222  221   2243332 234444444332 


Q ss_pred             -CCccEEEEecC
Q 047713          213 -GGVDRSVECTG  223 (329)
Q Consensus       213 -~~~d~Vid~~g  223 (329)
                       +++|++++++|
T Consensus        81 ~G~iDiLVnnAG   92 (258)
T d1iy8a_          81 FGRIDGFFNNAG   92 (258)
T ss_dssp             HSCCSEEEECCC
T ss_pred             hCCCCEEEECCc
Confidence             47999999887

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.77  E-value=0.0032  Score=51.47  Aligned_cols=104  Identities=18%  Similarity=0.211  Sum_probs=70.6

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cC---CceeeCCCCCCchHHHHH
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKK----FG---VTEFVNPKDYDKPVQQVI  207 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~----lg---~~~~~~~~~~~~~~~~~~  207 (329)
                      +...++++||++||=.|+|. |.+++.+|+..|. .+|++++.+++..+.+++    ++   .+.+... ..+  ..+  
T Consensus        88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~-~~d--~~~--  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLV-VSD--LAD--  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEE-CSC--GGG--
T ss_pred             HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEE-ecc--ccc--
Confidence            56778999999999998764 8888999998764 389999999998887764    21   1111100 111  100  


Q ss_pred             HhhhcCCccEEEEecC-CHHHHHHHHHhhccCCeEEEEec
Q 047713          208 ADMTNGGVDRSVECTG-SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       208 ~~~~~~~~d~Vid~~g-~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ..+..+.+|.||--.. ....++.+.+.|+++ |+++.+.
T Consensus       162 ~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~  200 (264)
T d1i9ga_         162 SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV  200 (264)
T ss_dssp             CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEe
Confidence            0111237998765444 345788899999998 9998775

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.0022  Score=52.49  Aligned_cols=79  Identities=18%  Similarity=0.331  Sum_probs=54.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-e----eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVT-E----FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~-~----~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+.. .    ..|..+. ++..+.+.+... 
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~v~~~~~~   86 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE-EDILSMFSAIRSQ   86 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCH-HHHHHHHHHHHHh
Confidence            4889999986 9999999999999999 899999998876643    333321 2    2233332 234444444332 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|++|++.|.
T Consensus        87 ~g~iD~lVnnAg~   99 (257)
T d1xg5a_          87 HSGVDICINNAGL   99 (257)
T ss_dssp             HCCCSEEEECCCC
T ss_pred             cCCCCEEEecccc
Confidence             479999999874

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.0025  Score=52.03  Aligned_cols=79  Identities=20%  Similarity=0.257  Sum_probs=54.0

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC----C-c---eeeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFG----V-T---EFVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg----~-~---~~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+ +++.    . .   ...|..+. ++..+.+++... 
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~   79 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ-QQLRDTFRKVVDH   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCH-HHHHHHHHHHHHH
Confidence            4899999986 9999999999999999 899999998876543 2331    1 1   12233332 224444444332 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|++++++|.
T Consensus        80 ~G~iDilVnnAg~   92 (254)
T d2gdza1          80 FGRLDILVNNAGV   92 (254)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCcCeecccccc
Confidence             379999999884

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.72  E-value=0.0046  Score=50.89  Aligned_cols=101  Identities=20%  Similarity=0.271  Sum_probs=65.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHH----HHHhcCCceee---CCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN-PSRFN----EAKKFGVTEFV---NPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~-~~~~~----~~~~lg~~~~~---~~~~~~~~~~~~~~~~~~--  212 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.++++ ++..+    .+++.+.+...   |..+. +++.+.+.+...  
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~-~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVV-EDIVRMFEEAVKIF   94 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCH-HHHHHHHHHHHHHh
Confidence            4899999986 9999999999999999 77777655 44333    34555654322   33221 234444444332  


Q ss_pred             CCccEEEEecCCHH-------------------------HHHHHHHhhccCCeEEEEecc
Q 047713          213 GGVDRSVECTGSVQ-------------------------AMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       213 ~~~d~Vid~~g~~~-------------------------~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +++|+++++.|...                         ..+.++..|... |+++.+..
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s  153 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGS  153 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECC
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-cccccccc
Confidence            37999998887421                         244555567776 88877754

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.71  E-value=0.0025  Score=52.07  Aligned_cols=79  Identities=20%  Similarity=0.270  Sum_probs=54.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.    +++.|...   ..|..+. ++..+.+.+...  +
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~-~~~~~~~~~~~~~~g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE-QELSALADFAISKLG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            5899999986 9999999999999999 89999988877654    34455432   2233322 123333333322  3


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+++++.|.
T Consensus        88 ~iDilvnnAG~   98 (255)
T d1fmca_          88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEeeeCCcC
Confidence            79999999874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.69  E-value=0.0037  Score=50.49  Aligned_cols=79  Identities=22%  Similarity=0.339  Sum_probs=56.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCcee---eCCCCCCchHHHHHHhhhc--CCcc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGVTEF---VNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .|+++||+|+ +++|.++++-+...|+ +|+.+.+++++.+. .++++.+..   .|..+. ++..+.+++...  +++|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~-~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDP-KAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCCH-HHHHHHHHHHHHHhCCcc
Confidence            5899999986 9999999999999999 88999998887654 566775432   233322 234444444433  4799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      +.++++|.
T Consensus        82 iLinnAg~   89 (241)
T d2a4ka1          82 GVAHFAGV   89 (241)
T ss_dssp             EEEEGGGG
T ss_pred             Eecccccc
Confidence            99998773

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.68  E-value=0.0056  Score=49.15  Aligned_cols=97  Identities=16%  Similarity=0.266  Sum_probs=60.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCC-----chHHHHHHhhhcC-Ccc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYD-----KPVQQVIADMTNG-GVD  216 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~-----~~~~~~~~~~~~~-~~d  216 (329)
                      .|++|||+|+ +++|.+.++.+...|+ +|+.++..+.+.      .........+..     +.....+.+..+. ++|
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD   73 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEE------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   73 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTT------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccc------ccccceeecccCcHHHHHHHHHHHHHHhCCCCce
Confidence            4789999986 9999999999999999 888887655432      111111111111     1123333344444 799


Q ss_pred             EEEEecCCH-----------H---------------HHHHHHHhhccCCeEEEEeccC
Q 047713          217 RSVECTGSV-----------Q---------------AMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       217 ~Vid~~g~~-----------~---------------~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      ++++++|..           +               ....++..++++ |+++.++..
T Consensus        74 ~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~  130 (236)
T d1dhra_          74 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAK  130 (236)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccH
Confidence            999988731           1               123344456776 999988753

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.66  E-value=0.0061  Score=46.25  Aligned_cols=97  Identities=10%  Similarity=0.011  Sum_probs=61.0

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      ++++|+|.|+|.+|..+++.+...|. .|++++++.++.+.+.+ ++...........   .....+.. ...|.++.+.
T Consensus         1 ~~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~---~~~~~~~i-~~~~~~i~~~   75 (182)
T d1e5qa1           1 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVND---DAALDAEV-AKHDLVISLI   75 (182)
T ss_dssp             CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTC---HHHHHHHH-TTSSEEEECS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccccc---hhhhHhhh-hccceeEeec
Confidence            36899999999999999998888899 89999999998877654 4432222111111   11111111 2467787777


Q ss_pred             CCHHHHHHHHHhhccCCeEEEEec
Q 047713          223 GSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       223 g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ...........++..+ ..++...
T Consensus        76 ~~~~~~~~~~~~~~~~-~~~~~~~   98 (182)
T d1e5qa1          76 PYTFHATVIKSAIRQK-KHVVTTS   98 (182)
T ss_dssp             CGGGHHHHHHHHHHHT-CEEECSS
T ss_pred             cchhhhHHHHHHHhhc-cceeecc
Confidence            5544444444555554 5655443

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.65  E-value=0.0059  Score=46.39  Aligned_cols=74  Identities=16%  Similarity=0.161  Sum_probs=50.0

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      ..+|++|||+|+|+.+.+++..+...|+ +++.+.++.++.+.+ +.+.....+...+.        .+.....+|+|++
T Consensus        15 ~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~--------~~~~~~~~dliIN   85 (170)
T d1nyta1          15 IRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSM--------DELEGHEFDLIIN   85 (170)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCS--------GGGTTCCCSEEEE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccc--------ccccccccceeec
Confidence            3578999999999999999999999998 688888888876654 33332111100110        1111236899999


Q ss_pred             ecCC
Q 047713          221 CTGS  224 (329)
Q Consensus       221 ~~g~  224 (329)
                      |+..
T Consensus        86 ~Tp~   89 (170)
T d1nyta1          86 ATSS   89 (170)
T ss_dssp             CCSC
T ss_pred             cccc
Confidence            9853

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.64  E-value=0.00023  Score=57.17  Aligned_cols=102  Identities=16%  Similarity=0.190  Sum_probs=61.9

Q ss_pred             hhhcc--CCCCCCeEEEEcCCHHHHHHHHHHHH---cCC---CEEEEEcCChhhHHHHHhc---------CCceeeCCCC
Q 047713          136 TVNVA--KPKKGQSVAIFGLGAVGLAAAEGARV---SGA---SRIIGVDLNPSRFNEAKKF---------GVTEFVNPKD  198 (329)
Q Consensus       136 l~~~~--~~~~g~~VlI~Gag~iG~aai~la~~---~G~---~~vv~~~~~~~~~~~~~~l---------g~~~~~~~~~  198 (329)
                      +.+..  .+++|++||.+|+|. |..++.+++.   .|.   .+|++++.+++-.+.+++.         +...+.... 
T Consensus        70 ~l~~L~~~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~-  147 (223)
T d1r18a_          70 ALEYLRDHLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE-  147 (223)
T ss_dssp             HHHHTTTTCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE-
T ss_pred             HHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe-
Confidence            34444  789999999998742 5555555554   342   2799999998766665431         111111110 


Q ss_pred             CCchHHHHHHhhh-cCCccEEEEecCCHHHHHHHHHhhccCCeEEEEe
Q 047713          199 YDKPVQQVIADMT-NGGVDRSVECTGSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       199 ~~~~~~~~~~~~~-~~~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      .+  ..   .... .+.||.|+-+.+.+..-+..++.|+++ |+++..
T Consensus       148 ~d--~~---~~~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~p  189 (223)
T d1r18a_         148 GD--GR---KGYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP  189 (223)
T ss_dssp             SC--GG---GCCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             cc--cc---cccccccceeeEEEEeechhchHHHHHhcCCC-cEEEEE
Confidence            11  00   1111 237999887766555556778899998 999874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.64  E-value=0.0026  Score=51.77  Aligned_cols=79  Identities=23%  Similarity=0.247  Sum_probs=53.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC--c-e--eeCCCCCCchHHHHHHhhhc--CC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGV--T-E--FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~--~-~--~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+ ++++.  . .  ..|..+.+ +..+.+.+...  ++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDED-GWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHH-HHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHH-HHHHHHHHHHHHhCC
Confidence            4899999986 9999999999999999 899999988877654 34432  1 1  12333221 23333333322  47


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|+++++.|.
T Consensus        83 iDiLVnnAg~   92 (251)
T d1zk4a1          83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999999874

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.64  E-value=0.0012  Score=53.97  Aligned_cols=80  Identities=9%  Similarity=0.043  Sum_probs=48.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce----eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTE----FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~----~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +|++|||+|+ +++|.+++..+...|+ +|+.+.++.++.+.+.+    .+-..    ..+......++.+.+.+...  
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            4899999986 9999999999999999 55555444443333222    22211    22322111223333433332  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++++++|.
T Consensus        83 g~iDilvnnAG~   94 (254)
T d1sbya1          83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEeCCCC
Confidence            379999999984

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.63  E-value=0.0022  Score=52.90  Aligned_cols=79  Identities=24%  Similarity=0.292  Sum_probs=53.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc------eeeCCCCCCchHHHHHHhhhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVT------EFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~------~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+..      ...|..+.+ +..+.+++...
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~-~v~~~~~~~~~   81 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTED-GQDQIINSTLK   81 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHH-HHHHHHHHHHH
Confidence            4889999986 9999999999999999 899999998876643    333321      122333322 23333443332


Q ss_pred             --CCccEEEEecCC
Q 047713          213 --GGVDRSVECTGS  224 (329)
Q Consensus       213 --~~~d~Vid~~g~  224 (329)
                        +++|++++++|.
T Consensus        82 ~~g~iDilvnnAG~   95 (272)
T d1xkqa_          82 QFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HhCCceEEEeCCcc
Confidence              479999998774

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.62  E-value=0.0046  Score=44.83  Aligned_cols=74  Identities=15%  Similarity=0.300  Sum_probs=53.9

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      +++|.|.|.+|..+++.+...|. .|++++.++++.+.+++.+...++-.....    ..+.+..-..+|.|+-+++..
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~gd~~~~----~~l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIANATEE----NELLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEECCTTCT----THHHHHTGGGCSEEEECCCSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceeeecccc----hhhhccCCccccEEEEEcCch
Confidence            57788999999999999999999 899999999999998888765544222211    123333222578888777643

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.62  E-value=0.0025  Score=52.59  Aligned_cols=78  Identities=27%  Similarity=0.336  Sum_probs=53.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc--e----eeCCCCCCchHHHHHHhhhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVT--E----FVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~--~----~~~~~~~~~~~~~~~~~~~~  212 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+..  .    ..|..+.+ +..+.+.+...
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~   80 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEAS-GQDDIINTTLA   80 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHH-HHHHHHHHHHH
Confidence            4899999986 9999999999999999 899999998876543    334421  1    22333322 23333443332


Q ss_pred             --CCccEEEEecC
Q 047713          213 --GGVDRSVECTG  223 (329)
Q Consensus       213 --~~~d~Vid~~g  223 (329)
                        +++|+++++.|
T Consensus        81 ~~G~iDilVnnAG   93 (274)
T d1xhla_          81 KFGKIDILVNNAG   93 (274)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCceEEEeecc
Confidence              37999999887

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.61  E-value=0.0051  Score=49.86  Aligned_cols=79  Identities=25%  Similarity=0.243  Sum_probs=54.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHhcCCce---eeCCCCCCchHHHHHHhhhc--CCc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR--FNEAKKFGVTE---FVNPKDYDKPVQQVIADMTN--GGV  215 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~--~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~  215 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++  .+.++++|...   ..|..+. ++..+.+++...  +++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~-~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQP-GDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCH-HHHHHHHHHHHHHcCCC
Confidence            4889999986 9999999999999999 78888876533  34566777543   2233332 234444444332  479


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |++++++|.
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.00082  Score=56.95  Aligned_cols=106  Identities=18%  Similarity=0.221  Sum_probs=67.7

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHh----cCC-----------cee-eCCCC
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGAS-RIIGVDLNPSRFNEAKK----FGV-----------TEF-VNPKD  198 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~-~vv~~~~~~~~~~~~~~----lg~-----------~~~-~~~~~  198 (329)
                      ++..++++||++||=.|+|. |.+++.+|+..|.. +|++++.+++..+.+++    ++.           +.+ +...+
T Consensus        90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            56678999999999998865 88899999987643 89999999988877654    110           000 00000


Q ss_pred             CCchHHHHHHhhhcCCccEEEEecCC-HHHHHHHHHhhccCCeEEEEecc
Q 047713          199 YDKPVQQVIADMTNGGVDRSVECTGS-VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       199 ~~~~~~~~~~~~~~~~~d~Vid~~g~-~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                          +.........+.+|.||--... ...++.+.+.|+++ |+++.+..
T Consensus       169 ----i~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~P  213 (324)
T d2b25a1         169 ----ISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV  213 (324)
T ss_dssp             ----TTCCC-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred             ----hhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEeC
Confidence                1000011112258887633332 35788899999998 99998753

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.58  E-value=0.0026  Score=52.23  Aligned_cols=79  Identities=19%  Similarity=0.244  Sum_probs=53.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc--e----eeCCCCCCchHHHHHHhhhc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVT--E----FVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~--~----~~~~~~~~~~~~~~~~~~~~  212 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.+..  .    ..|..+.+ +..+.+.+...
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~-~v~~~~~~~~~   81 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDA-GQDEILSTTLG   81 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHH-HHHHHHHHHHH
Confidence            4889999986 9999999999999999 899999998876543    333321  1    22333322 23344444332


Q ss_pred             --CCccEEEEecCC
Q 047713          213 --GGVDRSVECTGS  224 (329)
Q Consensus       213 --~~~d~Vid~~g~  224 (329)
                        +++|++++++|.
T Consensus        82 ~~g~iDilvnnAG~   95 (264)
T d1spxa_          82 KFGKLDILVNNAGA   95 (264)
T ss_dssp             HHSCCCEEEECCC-
T ss_pred             HhCCCCEeeccccc
Confidence              479999999873

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.57  E-value=0.01  Score=44.58  Aligned_cols=85  Identities=21%  Similarity=0.316  Sum_probs=57.8

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-ceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV-TEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      +|.|+|.|.+|...+..++..|. .|++.++++++.+.+++.+. +...+..+       .+     ...|+||-++. .
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~~~-------~~-----~~~DiIilavp-~   67 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLS-------LL-----QTAKIIFLCTP-I   67 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGG-------GG-----TTCSEEEECSC-H
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeeecc-------cc-----cccccccccCc-H
Confidence            47888999999998888888898 89999999999999998885 33322111       01     24799998884 3


Q ss_pred             HHHHHHHH----hhccCCeEEEEec
Q 047713          226 QAMISAFE----CVHDGWGVAVLVG  246 (329)
Q Consensus       226 ~~~~~~~~----~l~~~~G~vv~~g  246 (329)
                      +.....++    .+.++ ..++.++
T Consensus        68 ~~~~~vl~~l~~~l~~~-~iv~~~~   91 (165)
T d2f1ka2          68 QLILPTLEKLIPHLSPT-AIVTDVA   91 (165)
T ss_dssp             HHHHHHHHHHGGGSCTT-CEEEECC
T ss_pred             hhhhhhhhhhhhhcccc-cceeecc
Confidence            44444444    34443 4444443

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.0044  Score=51.03  Aligned_cols=101  Identities=19%  Similarity=0.242  Sum_probs=61.3

Q ss_pred             CCCeE-EEEcC-CHHHHHHHH-HHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSV-AIFGL-GAVGLAAAE-GARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~V-lI~Ga-g~iG~aai~-la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~-  212 (329)
                      +|.+| ||+|+ +++|++++. +++..|+ +|+.+.+++++.+.+    ++.+...   ..|..+.+ +..+.+.+... 
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~-sv~~~~~~~~~~   78 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQ-SIRALRDFLRKE   78 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHH-HHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHH-HHHHHHHHHHHh
Confidence            47788 56686 999999887 5556687 899999998876543    3334322   22333322 22222222222 


Q ss_pred             -CCccEEEEecCCH----------H---------------HHHHHHHhhccCCeEEEEecc
Q 047713          213 -GGVDRSVECTGSV----------Q---------------AMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       213 -~~~d~Vid~~g~~----------~---------------~~~~~~~~l~~~~G~vv~~g~  247 (329)
                       +++|++|+.+|..          +               ..+..+..|++. |+++.++.
T Consensus        79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS  138 (275)
T d1wmaa1          79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSS  138 (275)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred             cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccccc
Confidence             3799999998841          1               123344456776 89888864

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.55  E-value=0.01  Score=45.26  Aligned_cols=81  Identities=19%  Similarity=0.233  Sum_probs=55.4

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCC--------CchHHHHHHhhhcCCccE
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY--------DKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~--------~~~~~~~~~~~~~~~~d~  217 (329)
                      +++.|+|+|.+|++.+..+...|. .|...++++++.+.+++.+..........        ..+..+.++     ..|+
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~aD~   75 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK-----DADV   75 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT-----TCSE
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhc-----CCCE
Confidence            689999999999999999999998 89999999999998887664322111100        011222222     4899


Q ss_pred             EEEecCCHHHHHHHHH
Q 047713          218 SVECTGSVQAMISAFE  233 (329)
Q Consensus       218 Vid~~g~~~~~~~~~~  233 (329)
                      ||-++... ..+..++
T Consensus        76 iii~v~~~-~~~~~~~   90 (184)
T d1bg6a2          76 ILIVVPAI-HHASIAA   90 (184)
T ss_dssp             EEECSCGG-GHHHHHH
T ss_pred             EEEEEchh-HHHHHHH
Confidence            99998654 3344333

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.53  E-value=0.0035  Score=51.32  Aligned_cols=79  Identities=19%  Similarity=0.201  Sum_probs=52.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hH----HHHHhcCCcee---eCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPS-RF----NEAKKFGVTEF---VNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~-~~----~~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +|+++||+|+ +++|.++++.+...|+ +|+.++++.+ +.    +.+++.|....   .|..+.+ +..+.+++...  
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~-~v~~~~~~~~~~~   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVES-DVINLVQSAIKEF   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHh
Confidence            4899999986 9999999999989999 7888877643 33    33455665322   2333322 23333343332  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|++++++|.
T Consensus        84 G~iDiLVnnAG~   95 (261)
T d1geea_          84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEeecccee
Confidence            479999999874

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.0053  Score=51.23  Aligned_cols=80  Identities=16%  Similarity=0.231  Sum_probs=53.6

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc--------CCce---eeCCCCCCchHHHHHHh
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKF--------GVTE---FVNPKDYDKPVQQVIAD  209 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~l--------g~~~---~~~~~~~~~~~~~~~~~  209 (329)
                      -+|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ +++        +...   ..|..+. ++..+.+++
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~-~~v~~~~~~   87 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE-EEVNNLVKS   87 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCH-HHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCH-HHHHHHHHH
Confidence            46899999986 9999999999999999 899999988776532 222        2211   1233322 224444444


Q ss_pred             hhc--CCccEEEEecCC
Q 047713          210 MTN--GGVDRSVECTGS  224 (329)
Q Consensus       210 ~~~--~~~d~Vid~~g~  224 (329)
                      ...  +++|+++++.|.
T Consensus        88 ~~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHhCCeEEEEeeccc
Confidence            332  379999998873

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.50  E-value=0.005  Score=50.18  Aligned_cols=78  Identities=18%  Similarity=0.300  Sum_probs=53.3

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      |+.+||+|+ +++|.+++..+...|+ +|+.+++++++.+.    +++.|...   ..|..+.+ +..+.+++...  ++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~-~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP-EIEALVAAVVERYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHH-HHHHHHHHHHHHhCC
Confidence            677899986 9999999999999999 89999998877654    34455432   22333322 24444443332  47


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|++++++|.
T Consensus        80 iDilVnnAG~   89 (257)
T d2rhca1          80 VDVLVNNAGR   89 (257)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEecccc
Confidence            9999999874

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.49  E-value=0.0055  Score=50.92  Aligned_cols=79  Identities=16%  Similarity=0.188  Sum_probs=52.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-H----HhcCCce-e--eCCCCCCchHHHHHHhhh--c
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-A----KKFGVTE-F--VNPKDYDKPVQQVIADMT--N  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~--~  212 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+. +    ++.|... .  .|..+.+ +....+....  .
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~-~v~~~~~~~~~~~  101 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPD-MVQNTVSELIKVA  101 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHH-HHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChH-HHHHHhhhhhhhc
Confidence            4899999986 9999999999999999 89999998876543 2    2334332 2  2333221 2333333322  2


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|+++++.|.
T Consensus       102 g~iDilvnnAg~  113 (294)
T d1w6ua_         102 GHPNIVINNAAG  113 (294)
T ss_dssp             CSCSEEEECCCC
T ss_pred             cccchhhhhhhh
Confidence            379999999874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.48  E-value=0.0043  Score=50.63  Aligned_cols=80  Identities=19%  Similarity=0.235  Sum_probs=51.9

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHH----HHHhcCCceee---CCCCCCchHHHHHHhhhc-
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIG-VDLNPSRFN----EAKKFGVTEFV---NPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~-~~~~~~~~~----~~~~lg~~~~~---~~~~~~~~~~~~~~~~~~-  212 (329)
                      -.|+++||+|+ +++|.++++.+...|+ +|+. ..++++..+    .+++.|.+...   |..+. ++..+.+++... 
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~-~~v~~~~~~~~~~   81 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP-SEVVALFDKAVSH   81 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCH-HHHHHHHHHHHHH
Confidence            45899999986 9999999999999999 5655 455555443    34556654322   33221 123333333322 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|+++++.|.
T Consensus        82 ~g~idilinnag~   94 (259)
T d1ja9a_          82 FGGLDFVMSNSGM   94 (259)
T ss_dssp             HSCEEEEECCCCC
T ss_pred             cCCCcEEEecccc
Confidence             369999998884

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.41  E-value=0.0035  Score=48.44  Aligned_cols=105  Identities=8%  Similarity=-0.030  Sum_probs=65.4

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-e---------eCCCCCCchHHHH
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE-F---------VNPKDYDKPVQQV  206 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~-~---------~~~~~~~~~~~~~  206 (329)
                      +....+.||.+||..|+|. |..++.+|+. |. .|++++.+++..+.+++..... .         ....... .....
T Consensus        13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d   88 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE-IWCGD   88 (201)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE-EEEEC
T ss_pred             HHHcCCCCCCEEEEecCcC-CHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccc-eeccc
Confidence            4456789999999999874 7888888875 88 9999999999999887642110 0         0000000 00000


Q ss_pred             HHhh---hcCCccEEEEecCC--------HHHHHHHHHhhccCCeEEEEec
Q 047713          207 IADM---TNGGVDRSVECTGS--------VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       207 ~~~~---~~~~~d~Vid~~g~--------~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ..++   ....+|+|++....        ...+....+.|+++ |.++...
T Consensus        89 ~~~l~~~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~  138 (201)
T d1pjza_          89 FFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT  138 (201)
T ss_dssp             CSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred             ccccccccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence            0000   01258888875431        23567777889998 9876554

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.40  E-value=0.023  Score=40.85  Aligned_cols=74  Identities=19%  Similarity=0.235  Sum_probs=53.9

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK-FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      .|+|.|.|.+|...++.+...|. .|++++.++++.+.+++ ++...+. -+..   -...+++..-..+|.++-++...
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~vi~-Gd~~---~~~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVIN-GDCT---KIKTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEE-SCTT---SHHHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhhhcc-Cccc---chhhhhhcChhhhhhhcccCCcH
Confidence            58899999999999999999998 89999999999887754 5654333 1111   12344444334789999888664

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.39  E-value=0.0046  Score=50.26  Aligned_cols=79  Identities=18%  Similarity=0.226  Sum_probs=53.8

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--C
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--G  213 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~  213 (329)
                      .++.+||+|+ +++|.+++..+...|+ +|+.+++++++.+.    +++.|...   ..|..+. ++..+.+.+...  +
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~-~~v~~~~~~~~~~~g   86 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK-EEISEVINKILTEHK   86 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCH-HHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence            4789999986 9999999998888999 89999998887654    34455432   2233322 224444443322  4


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      ++|+++++.|.
T Consensus        87 ~iDilvnnag~   97 (251)
T d2c07a1          87 NVDILVNNAGI   97 (251)
T ss_dssp             CCCEEEECCCC
T ss_pred             Cceeeeecccc
Confidence            79999998874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.38  E-value=0.0039  Score=50.95  Aligned_cols=79  Identities=19%  Similarity=0.309  Sum_probs=53.3

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-----HHhcCCce---eeCCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--  212 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.     .+++|...   ..|..+. ++..+.+++...  
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT-DIVTKTIQQIDADL   85 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCH-HHHHHHHHHHHHHh
Confidence            4899999986 9999999999999999 88888887765532     23455432   2233332 224344443332  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|+++++.|.
T Consensus        86 g~iDilVnnAg~   97 (260)
T d1h5qa_          86 GPISGLIANAGV   97 (260)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCcEecccccc
Confidence            479999998873

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.35  E-value=0.0069  Score=49.24  Aligned_cols=79  Identities=19%  Similarity=0.294  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceee--CCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNPSRFNEAK----KFGVTEFV--NPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~----~lg~~~~~--~~~~~~~~~~~~~~~~~~--  212 (329)
                      +|+++||+|+ |  ++|.++++.+...|+ +|+.+.++++..+.++    ..+....+  |..+. ++..+.+.+...  
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQD-EELDALFAGVKEAF   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCH-HHHHHHHHHHHHhc
Confidence            4899999986 5  799999999988999 7888888776544333    23332322  22221 123333333222  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|+.+++.|.
T Consensus        85 g~iDilVnnag~   96 (256)
T d1ulua_          85 GGLDYLVHAIAF   96 (256)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCceEEEecccc
Confidence            479999998863

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0061  Score=49.99  Aligned_cols=42  Identities=17%  Similarity=0.243  Sum_probs=37.0

Q ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 047713          143 KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA  185 (329)
Q Consensus       143 ~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~  185 (329)
                      -+|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~   54 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKV   54 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            35899999986 9999999999999999 899999999887654

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.30  E-value=0.012  Score=47.77  Aligned_cols=83  Identities=17%  Similarity=0.227  Sum_probs=53.1

Q ss_pred             CCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-------HHHHHhcCCcee---eCCCCCCchHHHHHHh
Q 047713          141 KPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR-------FNEAKKFGVTEF---VNPKDYDKPVQQVIAD  209 (329)
Q Consensus       141 ~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~-------~~~~~~lg~~~~---~~~~~~~~~~~~~~~~  209 (329)
                      .++|+.++||+|+ +++|++.+..+...|+++|+.+.+++.+       .+.++..|....   .|..+.+ +..+.+.+
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~-~~~~~~~~   83 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRE-SVRELLGG   83 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHHT
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHH-HHHHhhcc
Confidence            5688999999986 9999999998888898667777654321       223445665332   2333322 23333333


Q ss_pred             hhcC-CccEEEEecCC
Q 047713          210 MTNG-GVDRSVECTGS  224 (329)
Q Consensus       210 ~~~~-~~d~Vid~~g~  224 (329)
                      +... .+|.|+.+.|.
T Consensus        84 i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             cccccccccccccccc
Confidence            3333 78999988873

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.003  Score=49.55  Aligned_cols=73  Identities=21%  Similarity=0.261  Sum_probs=49.5

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      .++|+|+|+ |.+|..++..+...|. +|.++.+++++.......+.+.+. |..+    . +.+.+.. .+.|+||.++
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~gD~~d----~-~~l~~al-~~~d~vi~~~   75 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVLQ----A-ADVDKTV-AGQDAVIVLL   75 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEESCTTS----H-HHHHHHH-TTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccccccccccccccc----h-hhHHHHh-cCCCEEEEEe
Confidence            468999987 9999999998888898 899998888875443333333322 2222    2 2233332 2589999998


Q ss_pred             CC
Q 047713          223 GS  224 (329)
Q Consensus       223 g~  224 (329)
                      |.
T Consensus        76 g~   77 (205)
T d1hdoa_          76 GT   77 (205)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.26  E-value=0.0069  Score=50.60  Aligned_cols=79  Identities=24%  Similarity=0.323  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh---------hhHH----HHHhcCCceeeCCCCCCchHHHHHHh
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP---------SRFN----EAKKFGVTEFVNPKDYDKPVQQVIAD  209 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~---------~~~~----~~~~lg~~~~~~~~~~~~~~~~~~~~  209 (329)
                      +|+++||+|+ +++|.+.+..+...|+ +|+.++.+.         +..+    ..+..+.....+..+.+ +..+.+++
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~v~~   83 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVE-AGEKLVKT   83 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGG-GHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHH-HHHHHHHH
Confidence            4899999986 9999999999999999 788875432         2222    22333444444443322 23444444


Q ss_pred             hhc--CCccEEEEecCC
Q 047713          210 MTN--GGVDRSVECTGS  224 (329)
Q Consensus       210 ~~~--~~~d~Vid~~g~  224 (329)
                      ...  +++|++++++|.
T Consensus        84 ~~~~~G~iDiLVnNAGi  100 (302)
T d1gz6a_          84 ALDTFGRIDVVVNNAGI  100 (302)
T ss_dssp             HHHHTSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCcc
Confidence            332  479999999884

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.24  E-value=0.01  Score=45.53  Aligned_cols=42  Identities=19%  Similarity=0.348  Sum_probs=35.8

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE  184 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~  184 (329)
                      -++.+|+|.|+|+.+.+++..+...|.++++.+.+++++.+.
T Consensus        16 l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~   57 (182)
T d1vi2a1          16 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDK   57 (182)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHH
Confidence            367899999999999999999988999888888888766554

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.17  E-value=0.0087  Score=47.84  Aligned_cols=93  Identities=18%  Similarity=0.188  Sum_probs=65.3

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      +.++.+||=.|+| .|..+..+++ .|+ +|++++.+++..+.+++-+....+.....+  +     ....+.+|+|+-.
T Consensus        40 ~~~~~~vLDiGcG-~G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~~~--l-----~~~~~~fD~ii~~  109 (246)
T d2avna1          40 LKNPCRVLDLGGG-TGKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKAED--L-----PFPSGAFEAVLAL  109 (246)
T ss_dssp             CCSCCEEEEETCT-TCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCTTS--C-----CSCTTCEEEEEEC
T ss_pred             cCCCCEEEEECCC-Cchhcccccc-cce-EEEEeecccccccccccccccccccccccc--c-----ccccccccceeee
Confidence            4467899988987 5888888886 487 899999999999999987765444322211  1     1223479998854


Q ss_pred             cC-------CHHHHHHHHHhhccCCeEEEEe
Q 047713          222 TG-------SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       222 ~g-------~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      ..       ....+....++|+++ |.++..
T Consensus       110 ~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~  139 (246)
T d2avna1         110 GDVLSYVENKDKAFSEIRRVLVPD-GLLIAT  139 (246)
T ss_dssp             SSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence            32       123467788899998 987764

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.17  E-value=0.0014  Score=53.55  Aligned_cols=72  Identities=17%  Similarity=0.170  Sum_probs=49.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC----CceeeCCCCCCchHHHHHHhhhc--CCccEEE
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG----VTEFVNPKDYDKPVQQVIADMTN--GGVDRSV  219 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg----~~~~~~~~~~~~~~~~~~~~~~~--~~~d~Vi  219 (329)
                      ++||+|+ +++|++++..+...|+ +|+.++++.++.+.++.++    ...+.+..+    ..+.+++...  |++|+++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~----~~~~~~~~~~~~G~iDiLV   76 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQE----PAELIEAVTSAYGQVDVLV   76 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCS----HHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHHH----HHHHHHHHHHHcCCCCEEE
Confidence            6889986 9999999998889999 8999888887777665543    222222221    4444433332  4799999


Q ss_pred             EecC
Q 047713          220 ECTG  223 (329)
Q Consensus       220 d~~g  223 (329)
                      ++.|
T Consensus        77 nNAg   80 (252)
T d1zmta1          77 SNDI   80 (252)
T ss_dssp             EECC
T ss_pred             ECCc
Confidence            8766

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.16  E-value=0.0088  Score=47.75  Aligned_cols=102  Identities=19%  Similarity=0.151  Sum_probs=66.9

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.+.+.++||++||=+|+|. |..+..+++. +. +|++++.++...+.+++    .+...+.... .+  ..+  ..+.
T Consensus         8 l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~-~d--~~~--~~~~   79 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQ-GT--AES--LPFP   79 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEE-CB--TTB--CCSC
T ss_pred             HHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhcccccccccccc-cc--ccc--cccc
Confidence            56788999999999999864 7777888875 55 89999999987766544    3332111000 00  000  0112


Q ss_pred             cCCccEEEEecC------CHHHHHHHHHhhccCCeEEEEec
Q 047713          212 NGGVDRSVECTG------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       212 ~~~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .+.+|+|+-.-.      ....+..+.+.|+|+ |.++...
T Consensus        80 ~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~~  119 (234)
T d1xxla_          80 DDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVD  119 (234)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEEE
Confidence            247999885432      234578888999998 9888764

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.13  E-value=0.0091  Score=45.96  Aligned_cols=103  Identities=18%  Similarity=0.236  Sum_probs=64.7

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +....++++|++||=.|+|. |..++.+|+. +. +|++++.+++..+.+++    +|...-+.....+  ..+....  
T Consensus        25 il~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gd--a~~~~~~--   97 (186)
T d1l3ia_          25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGD--APEALCK--   97 (186)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESC--HHHHHTT--
T ss_pred             HHHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEECc--hhhcccc--
Confidence            44567889999999998753 4555666664 44 89999999988776654    5542111111122  3222211  


Q ss_pred             cCCccEEEEecC---CHHHHHHHHHhhccCCeEEEEec
Q 047713          212 NGGVDRSVECTG---SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       212 ~~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ...+|.|+-..+   ....++.+.+.|+++ |+++...
T Consensus        98 ~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  134 (186)
T d1l3ia_          98 IPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (186)
T ss_dssp             SCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEe
Confidence            237998874432   235577888899998 9887653

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.0012  Score=52.99  Aligned_cols=98  Identities=19%  Similarity=0.212  Sum_probs=64.4

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce--eeCCCCCCchHHHHHHhhhcCCccEEE-
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE--FVNPKDYDKPVQQVIADMTNGGVDRSV-  219 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~d~Vi-  219 (329)
                      .+|.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++.....  .+.....+  .......+..+.+|.|+ 
T Consensus        52 ~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~fD~i~f  127 (229)
T d1zx0a1          52 SKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL--WEDVAPTLPDGHFDGILY  127 (229)
T ss_dssp             TTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESC--HHHHGGGSCTTCEEEEEE
T ss_pred             cCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccccc--ccccccccccccccceee
Confidence            5789999998863 7788888887655 8999999999998887653221  11111111  33333444445898874 


Q ss_pred             EecCC----------HHHHHHHHHhhccCCeEEEEe
Q 047713          220 ECTGS----------VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       220 d~~g~----------~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      |.+..          ...+..+.++|+++ |.++..
T Consensus       128 D~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~  162 (229)
T d1zx0a1         128 DTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYC  162 (229)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred             cccccccccccccCHHHHHHHHHHHcCCC-cEEEEE
Confidence            54432          12456677899998 988764

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.13  E-value=0.035  Score=40.96  Aligned_cols=82  Identities=21%  Similarity=0.231  Sum_probs=55.4

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      +|.++|+|.+|.+.++-+...|..++++.++++++.+.+. ++|....-+.++-             ...|+||-++ .+
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~v-------------~~~Div~lav-kP   67 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPEL-------------HSDDVLILAV-KP   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCC-------------CTTSEEEECS-CH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccccccccc-------------cccceEEEec-CH
Confidence            4778899999998888443344338999999999887765 4665433222110             1469999998 46


Q ss_pred             HHHHHHHHhhccCCeEEE
Q 047713          226 QAMISAFECVHDGWGVAV  243 (329)
Q Consensus       226 ~~~~~~~~~l~~~~G~vv  243 (329)
                      +.+...++-+++. ++++
T Consensus        68 ~~~~~v~~~l~~~-~~~v   84 (152)
T d1yqga2          68 QDMEAACKNIRTN-GALV   84 (152)
T ss_dssp             HHHHHHHTTCCCT-TCEE
T ss_pred             HHHHHhHHHHhhc-ccEE
Confidence            6777777777665 5544

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.11  E-value=0.01  Score=48.23  Aligned_cols=76  Identities=22%  Similarity=0.241  Sum_probs=51.3

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc--CCcc
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN--GGVD  216 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~~d  216 (329)
                      .+||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.|...   ..|..+.+ +..+.+.+...  +++|
T Consensus         3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRD-QVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHH-HHHHHHHHHHHHTTCCC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHH-HHHHHHHHHHHHhCCcc
Confidence            4688986 9999999998888999 899999998876543    4455432   22333322 23334444332  4799


Q ss_pred             EEEEecCC
Q 047713          217 RSVECTGS  224 (329)
Q Consensus       217 ~Vid~~g~  224 (329)
                      ++++++|.
T Consensus        81 ilVnnAG~   88 (255)
T d1gega_          81 VIVNNAGV   88 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99998873

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.11  E-value=0.011  Score=48.11  Aligned_cols=79  Identities=20%  Similarity=0.358  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHHHH-----HhcCCcee---eCCCCCCchHHHHHHhhhc-
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN-PSRFNEA-----KKFGVTEF---VNPKDYDKPVQQVIADMTN-  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~-~~~~~~~-----~~lg~~~~---~~~~~~~~~~~~~~~~~~~-  212 (329)
                      +|+++||+|+ +++|.+++..+...|+ +|+.++++ +++.+.+     ++.|....   .|..+. ++..+.+++... 
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~-~~v~~~~~~~~~~   80 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKG-EAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSH-HHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHH
Confidence            5889999986 9999999999999999 88888875 3443332     23344332   233322 223343433332 


Q ss_pred             -CCccEEEEecCC
Q 047713          213 -GGVDRSVECTGS  224 (329)
Q Consensus       213 -~~~d~Vid~~g~  224 (329)
                       +++|++++++|.
T Consensus        81 ~G~iDiLVnnAG~   93 (260)
T d1x1ta1          81 MGRIDILVNNAGI   93 (260)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             hCCCcEEEeeccc
Confidence             479999999884

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.08  E-value=0.004  Score=50.15  Aligned_cols=75  Identities=21%  Similarity=0.227  Sum_probs=50.2

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc--CCccEEEE
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN--GGVDRSVE  220 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~d~Vid  220 (329)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.    ....|..+.+ +..+.+.+...  +++|++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~----~~~~Dv~~~~-~v~~~~~~~~~~~g~iDiLVn   79 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF----GVEVDVTDSD-AVDRAFTAVEEHQGPVEVLVS   79 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE----EEECCTTCHH-HHHHHHHHHHHHHSSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCce----EEEEecCCHH-HHHHHHHHHHHhcCCceEEEe
Confidence            5899999986 9999999999999999 8999988766543211    1223333322 23333333332  37999999


Q ss_pred             ecCC
Q 047713          221 CTGS  224 (329)
Q Consensus       221 ~~g~  224 (329)
                      ++|.
T Consensus        80 nAG~   83 (237)
T d1uzma1          80 NAGL   83 (237)
T ss_dssp             ECSC
T ss_pred             eecc
Confidence            9874

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.018  Score=42.98  Aligned_cols=94  Identities=22%  Similarity=0.299  Sum_probs=65.3

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      .-.|++|+|.|-|-+|...++.++.+|+ +|++++.++-+.-.+.--|.. +..       +.+.+     ...|+++-+
T Consensus        21 ~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~~-------~~~a~-----~~adivvta   86 (163)
T d1li4a1          21 MIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VTT-------MDEAC-----QEGNIFVTT   86 (163)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC-------HHHHT-----TTCSEEEEC
T ss_pred             eecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-eee-------hhhhh-----hhccEEEec
Confidence            3479999999999999999999999999 999999988665444433432 211       22221     236899999


Q ss_pred             cCCHHHH-HHHHHhhccCCeEEEEeccCCC
Q 047713          222 TGSVQAM-ISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       222 ~g~~~~~-~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|....+ ..-++.|+++ ..+.-+|..+.
T Consensus        87 TGn~~vI~~eh~~~MKdg-aIL~N~Ghfd~  115 (163)
T d1li4a1          87 TGCIDIILGRHFEQMKDD-AIVCNIGHFDV  115 (163)
T ss_dssp             SSCSCSBCHHHHTTCCTT-EEEEECSSSTT
T ss_pred             CCCccchhHHHHHhccCC-eEEEEeccccc
Confidence            9864433 4666778886 66666665333

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.00  E-value=0.012  Score=46.70  Aligned_cols=101  Identities=18%  Similarity=0.199  Sum_probs=67.6

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCcee--eCCCCCCchHHHHHHh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEF--VNPKDYDKPVQQVIAD  209 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~--~~~~~~~~~~~~~~~~  209 (329)
                      +.+.++++++++||=+|+| .|..+..+++. |. +|++++.+++..+.+++    .+...+  +.....+      + .
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~------l-~   76 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ------M-P   76 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C------C-C
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccccc------c-c
Confidence            5677899999999999987 57777777765 66 89999999987766543    443321  1111100      0 1


Q ss_pred             hhcCCccEEEEecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          210 MTNGGVDRSVECTG------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       210 ~~~~~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +..+.+|+|+-.-.      ....+..+.++|+|+ |+++....
T Consensus        77 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~~  119 (231)
T d1vl5a_          77 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVDN  119 (231)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            12347999974432      235678899999998 99887643

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=95.96  E-value=0.0031  Score=51.35  Aligned_cols=94  Identities=24%  Similarity=0.325  Sum_probs=61.2

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcCCccE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~  217 (329)
                      .++|++||=.|+|. |..++.+++ .|. +|++++.+++..+.+++    .+....+..  .+  ...   ....+.||+
T Consensus       118 ~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~--~d--~~~---~~~~~~fD~  187 (254)
T d2nxca1         118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE--GS--LEA---ALPFGPFDL  187 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE--SC--HHH---HGGGCCEEE
T ss_pred             cCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe--cc--ccc---cccccccch
Confidence            57899999998863 666666555 687 89999999998877664    343222111  11  222   122348999


Q ss_pred             EEEecCCH---HHHHHHHHhhccCCeEEEEec
Q 047713          218 SVECTGSV---QAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       218 Vid~~g~~---~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+-.....   ..++...+.|+++ |+++..|
T Consensus       188 V~ani~~~~l~~l~~~~~~~LkpG-G~lilSg  218 (254)
T d2nxca1         188 LVANLYAELHAALAPRYREALVPG-GRALLTG  218 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             hhhccccccHHHHHHHHHHhcCCC-cEEEEEe
Confidence            98655322   2345666789998 9998754

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.91  E-value=0.012  Score=48.15  Aligned_cols=79  Identities=16%  Similarity=0.217  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceee--CCCCCCchHHHHHHhhhc--
Q 047713          144 KGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFV--NPKDYDKPVQQVIADMTN--  212 (329)
Q Consensus       144 ~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~--~~~~~~~~~~~~~~~~~~--  212 (329)
                      +|+++||+|+ |  +||.+++..+...|+ +|+.++++++..+.+++    .+...++  +..+ +.+..+.+.+...  
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK-EEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccc-hhhHHHHHHHHHHHc
Confidence            5899999985 5  799999999999999 88888887654333332    2222222  2222 1223333333322  


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|+++.+.|.
T Consensus        82 g~id~lV~nag~   93 (274)
T d2pd4a1          82 GSLDFIVHSVAF   93 (274)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCeEEeeccc
Confidence            479999988873

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.82  E-value=0.012  Score=45.75  Aligned_cols=81  Identities=25%  Similarity=0.279  Sum_probs=58.2

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      -.|.+|+|.|.|.+|..++.++...|+ +|++++.+.++.+....+|.+.+ ..           .++.....|+.+=|.
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~-----------~~~~~~~~DI~iPcA   91 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-AL-----------EDVLSTPCDVFAPCA   91 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CG-----------GGGGGCCCSEEEECS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Cc-----------cccccccceeeeccc
Confidence            368999999999999999999999999 89999999999988888887543 11           112223678887665


Q ss_pred             CCHHHHHHHHHhhc
Q 047713          223 GSVQAMISAFECVH  236 (329)
Q Consensus       223 g~~~~~~~~~~~l~  236 (329)
                      .....-....+.++
T Consensus        92 ~~~~I~~~~a~~i~  105 (201)
T d1c1da1          92 MGGVITTEVARTLD  105 (201)
T ss_dssp             CSCCBCHHHHHHCC
T ss_pred             ccccccHHHHhhhh
Confidence            43322234444443

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.81  E-value=0.0056  Score=41.39  Aligned_cols=35  Identities=29%  Similarity=0.395  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      +|++|+|+|.|.+|+++++++...|+ +|++.+..+
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~   38 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRM   38 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            47899999999999999999999999 788887644

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=95.81  E-value=0.013  Score=46.66  Aligned_cols=102  Identities=17%  Similarity=0.203  Sum_probs=68.1

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh---
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT---  211 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~---  211 (329)
                      .+....++||-+|.+ +|..++.+|+.+. -.++++++.+++..+.+++    .|....+.....+  ..+.+.++.   
T Consensus        55 ~~~~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~--a~~~L~~l~~~~  131 (227)
T d1susa1          55 LKLINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP--ALPVLDEMIKDE  131 (227)
T ss_dssp             HHHHTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHCG
T ss_pred             HHhcCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehH--HHHHHHHHHhcc
Confidence            344557899999874 5888888998764 2399999999988776654    5654434333333  445555442   


Q ss_pred             --cCCccEEE-EecC--CHHHHHHHHHhhccCCeEEEEe
Q 047713          212 --NGGVDRSV-ECTG--SVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       212 --~~~~d~Vi-d~~g--~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                        .+.||+|| |+--  ....++.++++|+++ |.++.=
T Consensus       132 ~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~D  169 (227)
T d1susa1         132 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYD  169 (227)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEE
T ss_pred             ccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEc
Confidence              33799987 3321  335688999999997 877654

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=95.78  E-value=0.012  Score=48.36  Aligned_cols=105  Identities=14%  Similarity=0.119  Sum_probs=67.9

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.....+.+|.+||=+|+| .|..+..+++..|+ +|++++.++...+.+++    .|...-+.....+  +.+ + ...
T Consensus        59 l~~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d--~~~-l-~~~  132 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGS--FLE-I-PCE  132 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECC--TTS-C-SSC
T ss_pred             HHHhcCCCCCCEEEEeCCC-CcHHHhhhhccCCc-EEEEEeccchhhhhhhcccccccccccccccccc--ccc-c-ccc
Confidence            3455688999999999987 47778888888888 89999999987766654    3332111100011  100 0 111


Q ss_pred             cCCccEEEEecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          212 NGGVDRSVECTG------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~~~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .+.+|+|+-.-.      ....+..+.++|+++ |+++....
T Consensus       133 ~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~  173 (282)
T d2o57a1         133 DNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  173 (282)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            237999974321      234577888899998 99887654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.70  E-value=0.091  Score=39.21  Aligned_cols=90  Identities=21%  Similarity=0.240  Sum_probs=60.7

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCC-ceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKFGV-TEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +|+|+|.|.+|...+..++..|. .+|++.+.+++..+.+++.+. +......+          .......|+|+-|+..
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~----------~~~~~~~dlIila~p~   72 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA----------KVEDFSPDFVMLSSPV   72 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGG----------GGGGTCCSEEEECSCH
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhh----------hhhccccccccccCCc
Confidence            68999999999999988888774 379999999999999999886 33332211          1111257899988853


Q ss_pred             HHH---HHHHHHhhccCCeEEEEecc
Q 047713          225 VQA---MISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       225 ~~~---~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ...   +....+.+.++ ..++.++.
T Consensus        73 ~~~~~vl~~l~~~~~~~-~ii~d~~s   97 (171)
T d2g5ca2          73 RTFREIAKKLSYILSED-ATVTDQGS   97 (171)
T ss_dssp             HHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             hhhhhhhhhhhcccccc-cccccccc
Confidence            222   23333455555 56666654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.69  E-value=0.00095  Score=53.90  Aligned_cols=95  Identities=21%  Similarity=0.296  Sum_probs=58.0

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCC-----chHHHHHHhh-hcCCccE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYD-----KPVQQVIADM-TNGGVDR  217 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~-----~~~~~~~~~~-~~~~~d~  217 (329)
                      +.+|||+|+ +++|.+.++.+...|+ +|+.+++++++.      .........+.+     ......+... ..+++|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~   74 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQ------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   74 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTT------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhc------ccccceeccccCchhHHHHHHHHHHHHhcCCCeeE
Confidence            457899986 9999999999999999 899988766532      111111111111     0111222222 2347999


Q ss_pred             EEEecCCH-----------H---------------HHHHHHHhhccCCeEEEEecc
Q 047713          218 SVECTGSV-----------Q---------------AMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       218 Vid~~g~~-----------~---------------~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +++++|..           +               ..+..+..++++ |+++.++.
T Consensus        75 linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS  129 (235)
T d1ooea_          75 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGA  129 (235)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             EEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEecc
Confidence            99988731           1               123444566776 99998875

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.67  E-value=0.0066  Score=49.09  Aligned_cols=78  Identities=15%  Similarity=0.219  Sum_probs=48.3

Q ss_pred             CeEEEEcC-CHHHHHHHHHHH---HcCCCEEEEEcCChhhHHHHHhc---CCc---eeeCCCCCC--chHHHHHHhhhc-
Q 047713          146 QSVAIFGL-GAVGLAAAEGAR---VSGASRIIGVDLNPSRFNEAKKF---GVT---EFVNPKDYD--KPVQQVIADMTN-  212 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~---~~G~~~vv~~~~~~~~~~~~~~l---g~~---~~~~~~~~~--~~~~~~~~~~~~-  212 (329)
                      ++|||+|+ +++|+++++.+.   ..|+ +|+.+.+++++.+.++++   +..   ..+|..+.+  ..+.+.+++... 
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            58999987 999999887554   3577 888888988776554432   221   122333322  123333333333 


Q ss_pred             CCccEEEEecCC
Q 047713          213 GGVDRSVECTGS  224 (329)
Q Consensus       213 ~~~d~Vid~~g~  224 (329)
                      +++|+++++.|.
T Consensus        82 ~~iDiLvnNAg~   93 (248)
T d1snya_          82 QGLNVLFNNAGI   93 (248)
T ss_dssp             GCCSEEEECCCC
T ss_pred             CCcceEEeeccc
Confidence            379999998773

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.58  E-value=0.041  Score=41.54  Aligned_cols=101  Identities=18%  Similarity=0.240  Sum_probs=61.9

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcC-CCEEEEEc-C-ChhhHHHHHhcCCceeeCCCCCCchHHH-------HHHhhhcCCcc
Q 047713          147 SVAIFGLGAVGLAAAEGARVSG-ASRIIGVD-L-NPSRFNEAKKFGVTEFVNPKDYDKPVQQ-------VIADMTNGGVD  216 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G-~~~vv~~~-~-~~~~~~~~~~lg~~~~~~~~~~~~~~~~-------~~~~~~~~~~d  216 (329)
                      +|.|.|.|-||...+..+.... . .++++. . +......+.+.+.+......+....+..       .+.++ ..++|
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vD   81 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDL-LEKVD   81 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHH-HTTCS
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhh-hccCC
Confidence            6889999999998888776443 4 555553 2 2344455666665443322111100111       01111 12699


Q ss_pred             EEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          217 RSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       217 ~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|+||+|.....+.+-..+..+ -+.+.++.+..
T Consensus        82 vViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~~~  114 (172)
T d2czca2          82 IIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKA  114 (172)
T ss_dssp             EEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCG
T ss_pred             EEEECCCCCCCHHHHHHHHHcC-CCEEEECCCCc
Confidence            9999999877778888888887 88888876443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.51  E-value=0.053  Score=40.34  Aligned_cols=87  Identities=16%  Similarity=0.228  Sum_probs=61.8

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQ  226 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~  226 (329)
                      +|-|+|.|.+|...+.-+...|. .|++.++++++.+.+++.+....-+       ..+.+++     .|+||-|+..+.
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~-------~~e~~~~-----~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETAST-------AKAIAEQ-----CDVIITMLPNSP   68 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECSS-------HHHHHHH-----CSEEEECCSSHH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhccc-------HHHHHhC-----CCeEEEEcCCHH
Confidence            47788999999999987778898 8999999999999988887643211       2233332     699999997666


Q ss_pred             HHHHHH-------HhhccCCeEEEEecc
Q 047713          227 AMISAF-------ECVHDGWGVAVLVGV  247 (329)
Q Consensus       227 ~~~~~~-------~~l~~~~G~vv~~g~  247 (329)
                      ..+..+       ..+.++ ..++.+++
T Consensus        69 ~v~~v~~~~~~~~~~~~~g-~iiid~sT   95 (161)
T d1vpda2          69 HVKEVALGENGIIEGAKPG-TVLIDMSS   95 (161)
T ss_dssp             HHHHHHHSTTCHHHHCCTT-CEEEECSC
T ss_pred             HHHHHHhCCcchhhccCCC-CEEEECCC
Confidence            655543       234454 56666654

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.49  E-value=0.11  Score=38.36  Aligned_cols=93  Identities=15%  Similarity=0.169  Sum_probs=54.8

Q ss_pred             CeEEEEcCCHHHH-HHHHHHHHcCCCEEEEEc-CCh--hhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc-CCccEEEE
Q 047713          146 QSVAIFGLGAVGL-AAAEGARVSGASRIIGVD-LNP--SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN-GGVDRSVE  220 (329)
Q Consensus       146 ~~VlI~Gag~iG~-aai~la~~~G~~~vv~~~-~~~--~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~d~Vid  220 (329)
                      -+|.|.|+|.+|. ..+++++....-.++++. ++.  ....+++++|......       ..+.+.+... .++|+||+
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~-------~~d~l~~~~~~~~iDiVf~   77 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYA-------GVEGLIKLPEFADIDFVFD   77 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESS-------HHHHHHHSGGGGGEEEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccccc-------ceeeeeecccccccCEEEE
Confidence            3688999999987 456777765433555554 343  3456788888654321       2333333322 37999999


Q ss_pred             ecCCHHHHHHHH--HhhccCCeEEEEec
Q 047713          221 CTGSVQAMISAF--ECVHDGWGVAVLVG  246 (329)
Q Consensus       221 ~~g~~~~~~~~~--~~l~~~~G~vv~~g  246 (329)
                      ++....+....+  +.+..+ -.++...
T Consensus        78 ATpag~h~~~~~~~~aa~~G-~~VID~s  104 (157)
T d1nvmb1          78 ATSASAHVQNEALLRQAKPG-IRLIDLT  104 (157)
T ss_dssp             CSCHHHHHHHHHHHHHHCTT-CEEEECS
T ss_pred             cCCchhHHHhHHHHHHHHcC-CEEEEcc
Confidence            986544555443  335543 4455444

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.47  E-value=0.028  Score=46.37  Aligned_cols=103  Identities=16%  Similarity=0.136  Sum_probs=67.5

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc--eeeCCCCC---CchHHHHHHhhhcCCccE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT--EFVNPKDY---DKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~--~~~~~~~~---~~~~~~~~~~~~~~~~d~  217 (329)
                      .+.++|||.|.|. |..+-.+++..+.+++.+++.+++-.+.++++-..  ...+...-   ..+....+++...+.+|+
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yDv  157 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA  157 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCccE
Confidence            4457999997653 55566778877777999999999998888875310  01111000   012555666554458998


Q ss_pred             EE-EecC---------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          218 SV-ECTG---------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       218 Vi-d~~g---------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      || |+..         +.+.++.+-++|+++ |.++.-..
T Consensus       158 Ii~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~  196 (290)
T d1xj5a_         158 VIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQAE  196 (290)
T ss_dssp             EEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             EEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEecC
Confidence            76 4432         245688889999998 98887643

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.41  E-value=0.036  Score=47.87  Aligned_cols=105  Identities=15%  Similarity=0.134  Sum_probs=67.2

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-----------CC----cee-eCCCCC
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-----------GV----TEF-VNPKDY  199 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-----------g~----~~~-~~~~~~  199 (329)
                      +++..++++|+++|=+|+| +|..++++|+..|++++++++.++...+.+++.           +.    ... +.....
T Consensus       208 Il~~l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~  286 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  286 (406)
T ss_dssp             HHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHHhCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence            5677899999999888987 599999999999987999999999877666532           11    111 111011


Q ss_pred             CchHHHHHHhhhcCCccEEEEe-cC-C---HHHHHHHHHhhccCCeEEEEec
Q 047713          200 DKPVQQVIADMTNGGVDRSVEC-TG-S---VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       200 ~~~~~~~~~~~~~~~~d~Vid~-~g-~---~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +....+.   . -..+|+|+-. .- .   ...+....+.|+++ |+++...
T Consensus       287 ~~~~~d~---~-~~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~  333 (406)
T d1u2za_         287 DNNRVAE---L-IPQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK  333 (406)
T ss_dssp             TCHHHHH---H-GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             hcccccc---c-cccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEec
Confidence            1011111   1 1136777632 11 1   23466777789998 9998764

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.033  Score=44.15  Aligned_cols=106  Identities=15%  Similarity=0.009  Sum_probs=66.3

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-ee------------eCCCCCC-chH
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT-EF------------VNPKDYD-KPV  203 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~-~~------------~~~~~~~-~~~  203 (329)
                      ....+.++.+||..|+|. |..+..+|+ .|+ .|++++.++...+.+++.... ..            ....... ...
T Consensus        39 ~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            445678899999998875 888888887 588 899999999998877653221 10            0000000 000


Q ss_pred             HHHHHhhh---cCCccEEEEecCC--------HHHHHHHHHhhccCCeEEEEecc
Q 047713          204 QQVIADMT---NGGVDRSVECTGS--------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       204 ~~~~~~~~---~~~~d~Vid~~g~--------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ...+.++.   .+.+|+|+++.-.        ...+....++|+++ |+++....
T Consensus       116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~  169 (229)
T d2bzga1         116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVL  169 (229)
T ss_dssp             ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEc
Confidence            00111221   2368999986531        24567788899998 98766654

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.36  E-value=0.029  Score=47.15  Aligned_cols=101  Identities=23%  Similarity=0.255  Sum_probs=62.4

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh-cC-Cc
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT-NG-GV  215 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~-~~-~~  215 (329)
                      +++|++||=.++| +|..++.+|+ .|++.|++++.+++..+.+++    .|...-+.....+  ..+.+..+. .+ .|
T Consensus       143 ~~~g~~VLDl~~g-~G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d--~~~~~~~~~~~~~~f  218 (324)
T d2as0a2         143 VQPGDRVLDVFTY-TGGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGS--AFEEMEKLQKKGEKF  218 (324)
T ss_dssp             CCTTCEEEETTCT-TTHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHTTCCE
T ss_pred             cCCCCeeecccCc-ccchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeech--hhhhhHHHHhccCCC
Confidence            5789999887553 2334444444 477799999999998887654    4543222122222  444444432 23 89


Q ss_pred             cEEEEecCC---------------HHHHHHHHHhhccCCeEEEEecc
Q 047713          216 DRSVECTGS---------------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       216 d~Vid~~g~---------------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      |+|+---..               .+.+..++++|+++ |.++.+..
T Consensus       219 D~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~  264 (324)
T d2as0a2         219 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSC  264 (324)
T ss_dssp             EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEEC
T ss_pred             CchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            998742111               23567788899998 99988864

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.11  Score=43.60  Aligned_cols=104  Identities=15%  Similarity=0.146  Sum_probs=66.3

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-----------CCc----eeeCCCCCC
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-----------GVT----EFVNPKDYD  200 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-----------g~~----~~~~~~~~~  200 (329)
                      ++...+++++++||=.|+| .|..++++|+..+++++++++.+++..+.+++.           |..    .++...-.+
T Consensus       143 ~~~~~~l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~  221 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  221 (328)
T ss_dssp             HHHHSCCCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTS
T ss_pred             HHHHcCCCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccc
Confidence            5677889999999988887 488899999999988899999999876655431           211    111111111


Q ss_pred             chHHHHHHhhhcCCccEEEEe-cC-CH---HHHHHHHHhhccCCeEEEEec
Q 047713          201 KPVQQVIADMTNGGVDRSVEC-TG-SV---QAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       201 ~~~~~~~~~~~~~~~d~Vid~-~g-~~---~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ..+.+.+.     .+|+|+-. .- .+   ..+...++.|+++ |+++...
T Consensus       222 ~~~~~~~~-----~advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~  266 (328)
T d1nw3a_         222 EEWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSK  266 (328)
T ss_dssp             HHHHHHHH-----HCSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             cccccccC-----cceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEec
Confidence            11222222     25777632 21 12   3455666778998 9998764

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.31  E-value=0.1  Score=40.55  Aligned_cols=101  Identities=13%  Similarity=0.039  Sum_probs=63.8

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh--
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT--  211 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~--  211 (329)
                      ....++||++||=.|+|. |..+..++...+..+|++++.+++..+.+++    .+-...+.....+      .....  
T Consensus        50 ~~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~------~~~~~~~  122 (209)
T d1nt2a_          50 HRLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASK------PWKYSGI  122 (209)
T ss_dssp             CCCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTC------GGGTTTT
T ss_pred             ccCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccC------ccccccc
Confidence            346789999999998864 6777788887776699999999988776543    3321111111111      01111  


Q ss_pred             cCCccEEEEecCCH----HHHHHHHHhhccCCeEEEEec
Q 047713          212 NGGVDRSVECTGSV----QAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       212 ~~~~d~Vid~~g~~----~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ...+|+++......    ..+..+.+.|+++ |.++.+.
T Consensus       123 ~~~vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  160 (209)
T d1nt2a_         123 VEKVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIMV  160 (209)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cceEEEEEecccChhhHHHHHHHHHHHhccC-CeEEEEE
Confidence            11577777544321    2456677899998 9887764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.23  E-value=0.041  Score=44.28  Aligned_cols=80  Identities=14%  Similarity=0.213  Sum_probs=49.6

Q ss_pred             CCCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCC-chHHHHHHhhhcC-
Q 047713          143 KKGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYD-KPVQQVIADMTNG-  213 (329)
Q Consensus       143 ~~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~-~~~~~~~~~~~~~-  213 (329)
                      -+|+++||+|+ |  ++|.+++..+...|+ +|+.+.++++..+.+++    .+....+.....+ .+......+.... 
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            35899999986 6  688999999999999 78888887665554433    3333322222111 1233333333322 


Q ss_pred             -CccEEEEecC
Q 047713          214 -GVDRSVECTG  223 (329)
Q Consensus       214 -~~d~Vid~~g  223 (329)
                       ..|+.+++.+
T Consensus        82 ~~~d~~v~~a~   92 (258)
T d1qsga_          82 PKFDGFVHSIG   92 (258)
T ss_dssp             SSEEEEEECCC
T ss_pred             cccceEEEeec
Confidence             7888888765

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.22  E-value=0.014  Score=47.56  Aligned_cols=96  Identities=18%  Similarity=0.206  Sum_probs=59.1

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcC-Cc
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNG-GV  215 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~-~~  215 (329)
                      .+++|++||-.++| +|..++.+|+. |.++|++++.+++..+.+++    .+....+.....+      .+++... .+
T Consensus       104 ~~~~g~~VlD~~aG-~G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D------~~~~~~~~~~  175 (260)
T d2frna1         104 VAKPDELVVDMFAG-IGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMD------NRDFPGENIA  175 (260)
T ss_dssp             HCCTTCEEEETTCT-TTTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC------TTTCCCCSCE
T ss_pred             hcCCccEEEECcce-EcHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcc------hHHhccCCCC
Confidence            35789999988654 35555566665 44489999999998887754    3443211111111      1222333 68


Q ss_pred             cEEE-Ee-cCCHHHHHHHHHhhccCCeEEEEe
Q 047713          216 DRSV-EC-TGSVQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       216 d~Vi-d~-~g~~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      |.|+ +. -.+...++.++++++++ |.+...
T Consensus       176 D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~  206 (260)
T d2frna1         176 DRILMGYVVRTHEFIPKALSIAKDG-AIIHYH  206 (260)
T ss_dssp             EEEEECCCSSGGGGHHHHHHHEEEE-EEEEEE
T ss_pred             CEEEECCCCchHHHHHHHHhhcCCC-CEEEEE
Confidence            8665 32 23456788899999987 876544

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.21  E-value=0.042  Score=40.72  Aligned_cols=94  Identities=23%  Similarity=0.358  Sum_probs=67.1

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      +-.|++++|.|=|-+|.-.++-++.+|+ +|++++.++-+.-.+.-=|. .+..       ..+.+     ...|+++-+
T Consensus        20 ~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf-~v~~-------~~~a~-----~~aDi~vTa   85 (163)
T d1v8ba1          20 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGF-NVVT-------LDEIV-----DKGDFFITC   85 (163)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTC-EECC-------HHHHT-----TTCSEEEEC
T ss_pred             eecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCC-ccCc-------hhHcc-----ccCcEEEEc
Confidence            3579999999999999999999999999 99999999866544432232 2221       22222     247999999


Q ss_pred             cCCHHHH-HHHHHhhccCCeEEEEeccCCC
Q 047713          222 TGSVQAM-ISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       222 ~g~~~~~-~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +|..+.+ ..-++.++++ ..+.-+|..+.
T Consensus        86 TGn~~vI~~~h~~~MKdg-aIl~N~GHfd~  114 (163)
T d1v8ba1          86 TGNVDVIKLEHLLKMKNN-AVVGNIGHFDD  114 (163)
T ss_dssp             CSSSSSBCHHHHTTCCTT-CEEEECSSTTT
T ss_pred             CCCCccccHHHHHHhhCC-eEEEeccccch
Confidence            9976543 4557788886 77777765443

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.20  E-value=0.07  Score=42.17  Aligned_cols=102  Identities=18%  Similarity=0.231  Sum_probs=65.6

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhc----CC-ceeeCCCCCCchHHHHHHhh
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKF----GV-TEFVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~l----g~-~~~~~~~~~~~~~~~~~~~~  210 (329)
                      .+...++||++||=.|+|+ |..+..+|+..|. .+|++++.+++..+.+++.    +. ..+.......    ... ..
T Consensus        66 l~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~----~~~-~~  139 (227)
T d1g8aa_          66 LKNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKP----EEY-RA  139 (227)
T ss_dssp             CCCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCG----GGG-TT
T ss_pred             ccccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCc----ccc-cc
Confidence            3556899999999998864 8888888988763 3899999999988776653    21 1111111110    000 11


Q ss_pred             hcCCccEEEEecCC----HHHHHHHHHhhccCCeEEEEe
Q 047713          211 TNGGVDRSVECTGS----VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       211 ~~~~~d~Vid~~g~----~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      ....+|+|+..+..    ...+..+.+.|+++ |+++.+
T Consensus       140 ~~~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~  177 (227)
T d1g8aa_         140 LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cccceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence            11268888755432    22467777889998 988765

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.15  E-value=0.087  Score=41.71  Aligned_cols=102  Identities=15%  Similarity=0.135  Sum_probs=64.0

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc----eeeCCCCCCchHHHHHHhhhc
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT----EFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~----~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      ++...++||++||=.|+|. |..+..+|+......|++++.+++..+.+++.-..    ..+......  .    .....
T Consensus        67 l~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~--~----~~~~~  139 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANK--P----QEYAN  139 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTC--G----GGGTT
T ss_pred             HHhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeecc--C----ccccc
Confidence            3556889999999999863 77777888865445999999999988877664221    111111111  0    11111


Q ss_pred             C--CccEEEEecCC----HHHHHHHHHhhccCCeEEEEec
Q 047713          213 G--GVDRSVECTGS----VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       213 ~--~~d~Vid~~g~----~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .  .+|+++...-.    ...+..+.+.|+++ |.++..-
T Consensus       140 ~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~~  178 (230)
T d1g8sa_         140 IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIAI  178 (230)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccceeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEEe
Confidence            2  45666654431    22356677789998 9877663

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.05  E-value=0.088  Score=38.68  Aligned_cols=85  Identities=16%  Similarity=0.200  Sum_probs=60.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      +|.++|+|.+|.+.+.-+...|. .+++..+++++.+.+ +++|....-+       ..+.++     ..|+||-++ .+
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~~~-------~~~~~~-----~~dvIilav-kp   67 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYAMS-------HQDLID-----QVDLVILGI-KP   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBCSS-------HHHHHH-----TCSEEEECS-CG
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeeech-------hhhhhh-----ccceeeeec-ch
Confidence            46788999999998886666676 788888888877664 6677643321       222222     379999998 56


Q ss_pred             HHHHHHHHhhccCCeEEEEec
Q 047713          226 QAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       226 ~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +.++..++.+.++ ..++.+.
T Consensus        68 ~~~~~vl~~l~~~-~~iis~~   87 (152)
T d2ahra2          68 QLFETVLKPLHFK-QPIISMA   87 (152)
T ss_dssp             GGHHHHHTTSCCC-SCEEECC
T ss_pred             HhHHHHhhhcccc-eeEeccc
Confidence            7778888888775 6666554

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.03  E-value=0.019  Score=46.16  Aligned_cols=46  Identities=39%  Similarity=0.392  Sum_probs=38.7

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNE-AKKFGV  190 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~-~~~lg~  190 (329)
                      +|+++||+|+ +++|.++++-+...|+ +|+.+++++++.+. .++++.
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~   51 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGN   51 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCC
Confidence            5899999986 9999999999999999 89999888776654 566664

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.73  E-value=0.049  Score=44.01  Aligned_cols=80  Identities=13%  Similarity=0.276  Sum_probs=51.0

Q ss_pred             CCCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhH-H-HHHhcCCce---eeCCCCCC--chHHHHHHhhhc
Q 047713          143 KKGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNPSRF-N-EAKKFGVTE---FVNPKDYD--KPVQQVIADMTN  212 (329)
Q Consensus       143 ~~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~~~~-~-~~~~lg~~~---~~~~~~~~--~~~~~~~~~~~~  212 (329)
                      -+|+++||+|+ |  ++|.++++-+...|+ +|+.+..+.++. + ..++++...   ..+..+.+  ....+.+.+...
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            45899999984 3  599999998889999 788887776654 3 334455422   22222211  123344444333


Q ss_pred             C--CccEEEEecC
Q 047713          213 G--GVDRSVECTG  223 (329)
Q Consensus       213 ~--~~d~Vid~~g  223 (329)
                      .  .+|+++++.|
T Consensus        83 ~~~~ld~~i~~ag   95 (268)
T d2h7ma1          83 AGNKLDGVVHSIG   95 (268)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceeeeccc
Confidence            3  6899998887

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=94.71  E-value=0.044  Score=43.94  Aligned_cols=77  Identities=17%  Similarity=0.218  Sum_probs=48.1

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHH----HHhcCCce---eeCCCCCCchHHHHHHhhhc--CC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFNE----AKKFGVTE---FVNPKDYDKPVQQVIADMTN--GG  214 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~~----~~~lg~~~---~~~~~~~~~~~~~~~~~~~~--~~  214 (329)
                      +.+||+|+ +++|+++++.+...|+ +|+.+ .+++++.+.    +++.|...   ..|..+.+ +..+.+++...  ++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEA-DVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHH-HHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHH-HHHHHHHHHHHHcCC
Confidence            35788886 9999999999999999 66654 456655443    34455432   22333321 23333333322  47


Q ss_pred             ccEEEEecCC
Q 047713          215 VDRSVECTGS  224 (329)
Q Consensus       215 ~d~Vid~~g~  224 (329)
                      +|+++++.|.
T Consensus        80 iDiLVnnAg~   89 (244)
T d1edoa_          80 IDVVVNNAGI   89 (244)
T ss_dssp             CSEEEECCCC
T ss_pred             CCcccccccc
Confidence            9999998874

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.65  E-value=0.03  Score=44.14  Aligned_cols=103  Identities=12%  Similarity=0.145  Sum_probs=66.2

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh-
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT-  211 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~-  211 (329)
                      ...+....++||-+|.+ +|..++.+|+.+. -.++++++.+++..+.+++    .|....+.....+  ..+.+.++. 
T Consensus        53 ~L~~~~~~k~vLEiGt~-~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gd--a~e~l~~~~~  129 (219)
T d2avda1          53 NLARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKP--ALETLDELLA  129 (219)
T ss_dssp             HHHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHH
T ss_pred             HHHHccCCCeEEEEech-hhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEee--hhhcchhhhh
Confidence            33445567899999875 4788888888763 2399999999988766654    4544333322233  444444332 


Q ss_pred             ---cCCccEEEEecC---CHHHHHHHHHhhccCCeEEEE
Q 047713          212 ---NGGVDRSVECTG---SVQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       212 ---~~~~d~Vid~~g---~~~~~~~~~~~l~~~~G~vv~  244 (329)
                         .+.+|+||--..   ....++.++++|+++ |.++.
T Consensus       130 ~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~  167 (219)
T d2avda1         130 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAV  167 (219)
T ss_dssp             TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEE
T ss_pred             hcccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEE
Confidence               237999974332   234578999999996 76654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.61  E-value=0.12  Score=37.77  Aligned_cols=92  Identities=13%  Similarity=0.215  Sum_probs=57.4

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEcCChh--h-HHHHHhcCCceeeCCCCCCch---------------HH
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVS--GASRIIGVDLNPS--R-FNEAKKFGVTEFVNPKDYDKP---------------VQ  204 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~--G~~~vv~~~~~~~--~-~~~~~~lg~~~~~~~~~~~~~---------------~~  204 (329)
                      ++|.|.|+ |.+|.-+.++.+..  .. +|++++....  . .+++++|....++..++....               ..
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~   81 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA   81 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence            68999998 99999999999865  34 6666655432  2 345778888776544332100               11


Q ss_pred             HHHHhhhcCCccEEEEecCCHHHHHHHHHhhccC
Q 047713          205 QVIADMTNGGVDRSVECTGSVQAMISAFECVHDG  238 (329)
Q Consensus       205 ~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~~~  238 (329)
                      +.+.++....+|+|+.+.-+...+.-.+..++.+
T Consensus        82 ~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g  115 (150)
T d1r0ka2          82 DALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG  115 (150)
T ss_dssp             HHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT
T ss_pred             cchheecccccceeeeecCchhHHHHHHHHHhcC
Confidence            1122222225778777765556777777777764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.57  E-value=0.032  Score=46.48  Aligned_cols=45  Identities=24%  Similarity=0.368  Sum_probs=33.0

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF  182 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~  182 (329)
                      +.....+.+|++||-+|+| .|..++.+|+ .|+++|++++.++...
T Consensus        27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~   71 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILY   71 (311)
T ss_dssp             HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHH
T ss_pred             HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHH
Confidence            3344456679999999887 5666666666 4777999999887543

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.52  E-value=0.17  Score=37.95  Aligned_cols=100  Identities=24%  Similarity=0.256  Sum_probs=59.6

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC-C-hhhHHHHHhcCCceeeCCCCCCchHHH-------HHHhhhcCCccE
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDL-N-PSRFNEAKKFGVTEFVNPKDYDKPVQQ-------VIADMTNGGVDR  217 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~-~-~~~~~~~~~lg~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~  217 (329)
                      +|.|.|-|-+|..++..+...+--.++++.. + ......+.+++.+......+....+..       .+.++. .++|+
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~vDv   81 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEADI   81 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTCSE
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh-cCCCE
Confidence            6889999999999999776554225555432 2 233445555665443322221100000       011111 25999


Q ss_pred             EEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          218 SVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       218 Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      |+||+|.....+.+-..+..+ -+++..+..
T Consensus        82 ViEcTG~f~~~~~~~~hl~~G-~K~vi~~~~  111 (171)
T d1cf2o1          82 VIDCTPEGIGAKNLKMYKEKG-IKAIFQGGE  111 (171)
T ss_dssp             EEECCSTTHHHHHHHHHHHTT-CEEEECTTS
T ss_pred             EEEccCCCCCHHHHHHHHHcC-CCEEEECCC
Confidence            999999877777777788887 787777653

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.41  E-value=0.017  Score=46.29  Aligned_cols=97  Identities=16%  Similarity=0.221  Sum_probs=64.0

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      ++......++.+||-.|+|. |..+..+++ .|+ +|++++.+++..+.+++.    +...-+.  ..+      +.++.
T Consensus        33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~--~~d------~~~l~  101 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFL--QGD------VLEIA  101 (251)
T ss_dssp             HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEE--ESC------GGGCC
T ss_pred             HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchhe--ehh------hhhcc
Confidence            44555667788999999875 788887777 577 899999999888877653    2211110  011      23333


Q ss_pred             cC-CccEEEEecCC---------HHHHHHHHHhhccCCeEEEE
Q 047713          212 NG-GVDRSVECTGS---------VQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       212 ~~-~~d~Vid~~g~---------~~~~~~~~~~l~~~~G~vv~  244 (329)
                      .. .+|+|+-..+.         ...++.+.++|+++ |.++.
T Consensus       102 ~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii  143 (251)
T d1wzna1         102 FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT  143 (251)
T ss_dssp             CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence            23 79998864321         13567788899998 98765

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=94.31  E-value=0.043  Score=43.85  Aligned_cols=77  Identities=16%  Similarity=0.197  Sum_probs=49.4

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCC------EEEEEcCChhhHHHH----HhcCCce---eeCCCCCCchHHHHHHhhhc
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGAS------RIIGVDLNPSRFNEA----KKFGVTE---FVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~------~vv~~~~~~~~~~~~----~~lg~~~---~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .|||+|+ +++|.+++..+...|++      .|+.+++++++.+.+    ++.|...   ..|..+. ++..+.+++...
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~-~~v~~~~~~~~~   81 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDM-ADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSH-HHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHH
Confidence            3688886 99999999988888874      388888888776543    3344322   2233332 223333433322


Q ss_pred             --CCccEEEEecCC
Q 047713          213 --GGVDRSVECTGS  224 (329)
Q Consensus       213 --~~~d~Vid~~g~  224 (329)
                        +.+|+++++.|.
T Consensus        82 ~~g~iDilvnnAg~   95 (240)
T d2bd0a1          82 RYGHIDCLVNNAGV   95 (240)
T ss_dssp             HTSCCSEEEECCCC
T ss_pred             HcCCcceeeccccc
Confidence              379999999884

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.30  E-value=0.046  Score=46.03  Aligned_cols=47  Identities=21%  Similarity=0.239  Sum_probs=38.1

Q ss_pred             ccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH
Q 047713          139 VAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK  186 (329)
Q Consensus       139 ~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~  186 (329)
                      ..-+++|++|||+|+ |-+|...+..+...|. .|+++.++.++.+.++
T Consensus         5 ~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence            345678999999987 9999999998888898 8888888777665544

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=94.16  E-value=0.045  Score=44.67  Aligned_cols=101  Identities=16%  Similarity=0.123  Sum_probs=65.0

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc--eeeCCCCC---CchHHHHHHhhhcCCccE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT--EFVNPKDY---DKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~--~~~~~~~~---~~~~~~~~~~~~~~~~d~  217 (329)
                      .+.++|||.|.|. |..+..++++.+.++|.+++.+++-.+.++++-..  ...+...-   ..+....+++ +...+|+
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~-~~~~yDv  151 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK-SENQYDV  151 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT-CCSCEEE
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHHHHHhh-cCCCCCE
Confidence            4468999997654 56666777877777999999999998888775210  00000000   0113344443 2348999


Q ss_pred             EE-EecC---------CHHHHHHHHHhhccCCeEEEEec
Q 047713          218 SV-ECTG---------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       218 Vi-d~~g---------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      |+ |...         +.+.++.+-+.|+++ |.++.-.
T Consensus       152 Ii~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~  189 (274)
T d1iy9a_         152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (274)
T ss_dssp             EEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             EEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEec
Confidence            86 4322         345688899999998 9888654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.99  E-value=0.47  Score=34.84  Aligned_cols=88  Identities=17%  Similarity=0.245  Sum_probs=59.4

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      .+|.++|.|.+|...+.-+...|. .|.+.++++++.+.+.+.+.....+       ..+.++     ..|+++-++...
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~-------~~e~~~-----~~diii~~v~~~   68 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAARS-------ARDAVQ-----GADVVISMLPAS   68 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECSS-------HHHHHT-----SCSEEEECCSCH
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhccccch-------hhhhcc-----ccCeeeecccch
Confidence            368888999999988887777898 8999999999999888887653321       222221     367888888765


Q ss_pred             HHHHHHH-------HhhccCCeEEEEecc
Q 047713          226 QAMISAF-------ECVHDGWGVAVLVGV  247 (329)
Q Consensus       226 ~~~~~~~-------~~l~~~~G~vv~~g~  247 (329)
                      ......+       ..+.++ -.++.++.
T Consensus        69 ~~~~~v~~~~~~~~~~l~~g-~iiid~st   96 (162)
T d3cuma2          69 QHVEGLYLDDDGLLAHIAPG-TLVLECST   96 (162)
T ss_dssp             HHHHHHHHSTTCHHHHSCTT-CEEEECSC
T ss_pred             hhHHHHHhccccccccCCCC-CEEEECCC
Confidence            5544332       234444 45555554

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.95  E-value=0.12  Score=40.35  Aligned_cols=71  Identities=17%  Similarity=0.179  Sum_probs=44.4

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHhcCCceee-CCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGAS-RIIGVDLNPSRFNEAKKFGVTEFV-NPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~-~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      .+|||+|+ |.+|..++..+...|.. .|+...+++++.+.+.. +...+. +..+    . ..+.+.. .++|.|+.+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~~~d~~~----~-~~~~~~~-~~~d~vi~~a   76 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVFIGDITD----A-DSINPAF-QGIDALVILT   76 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEEECCTTS----H-HHHHHHH-TTCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEEEeeecc----c-ccccccc-ccceeeEEEE
Confidence            58999986 99999999998888853 56667777776554322 222222 2221    2 1222222 2588998887


Q ss_pred             C
Q 047713          223 G  223 (329)
Q Consensus       223 g  223 (329)
                      +
T Consensus        77 ~   77 (252)
T d2q46a1          77 S   77 (252)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=93.89  E-value=0.18  Score=38.75  Aligned_cols=86  Identities=19%  Similarity=0.165  Sum_probs=53.5

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      .|.+|.|+|.|.+|..++++++.+|. +|++.+.........  .+..    ..  +  +.+.+++     .|+|+-++.
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~--~~~~----~~--~--l~~~l~~-----sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEK--KGYY----VD--S--LDDLYKQ-----ADVISLHVP  105 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHH--TTCB----CS--C--HHHHHHH-----CSEEEECSC
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCccccccccc--ceee----ec--c--ccccccc-----cccccccCC
Confidence            48899999999999999999999999 899987654432221  1111    11  1  4333333     577776654


Q ss_pred             CHH----HH-HHHHHhhccCCeEEEEec
Q 047713          224 SVQ----AM-ISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       224 ~~~----~~-~~~~~~l~~~~G~vv~~g  246 (329)
                      ..+    .+ ...++.++++ ..++-++
T Consensus       106 lt~~T~~li~~~~l~~mk~~-a~lIN~s  132 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQD-VVIVNVS  132 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTT-EEEEECS
T ss_pred             ccccccccccHHHHhhhCCc-cEEEecC
Confidence            211    11 3455667665 5555553

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.80  E-value=0.018  Score=45.20  Aligned_cols=93  Identities=15%  Similarity=0.146  Sum_probs=59.2

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce-eeCCCCCCchHHHHHHhhhcCCcc
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTE-FVNPKDYDKPVQQVIADMTNGGVD  216 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~d  216 (329)
                      ++++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++    .+... .+.....+       .....+.+|
T Consensus        35 l~~~~~ILDiGcG~-G~~~~~la~~-~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~-------l~~~~~~fD  104 (226)
T d1ve3a1          35 MKKRGKVLDLACGV-GGFSFLLEDY-GF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-------LSFEDKTFD  104 (226)
T ss_dssp             CCSCCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-------CCSCTTCEE
T ss_pred             cCCCCEEEEECCCc-chhhhhHhhh-hc-ccccccccccchhhhhhhhcccccccccccccccc-------ccccCcCce
Confidence            46788999999874 7788888874 77 89999999988877654    23211 11110000       011123799


Q ss_pred             EEEEecCC--------HHHHHHHHHhhccCCeEEEEe
Q 047713          217 RSVECTGS--------VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       217 ~Vid~~g~--------~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      +|+-...-        ...+....++|+++ |+++..
T Consensus       105 ~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~  140 (226)
T d1ve3a1         105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY  140 (226)
T ss_dssp             EEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence            98743321        12467788899998 987655

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.75  E-value=0.029  Score=42.85  Aligned_cols=35  Identities=20%  Similarity=0.244  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      +++|+|+|+|+.|+.++..++..|.+.|..++..+
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            67999999999999999999999985577777654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.74  E-value=0.15  Score=35.80  Aligned_cols=66  Identities=24%  Similarity=0.364  Sum_probs=45.3

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVE  220 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid  220 (329)
                      ++++++++|.|+|.+|.-++..++..|. +|..++..+.-+             ....+....+.+++.... |+++..+
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~~l-------------~~~~~~~~~~~~~~~l~~~GV~i~~~   92 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPRLM-------------SRAAPATLADFVARYHAAQGVDLRFE   92 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSTT-------------TTTSCHHHHHHHHHHHHTTTCEEEES
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccccc-------------cccCCHHHHHHHHHHHHHCCcEEEeC
Confidence            4567899999999999999999999998 888887655311             011122255555555444 7777765


Q ss_pred             e
Q 047713          221 C  221 (329)
Q Consensus       221 ~  221 (329)
                      .
T Consensus        93 ~   93 (121)
T d1d7ya2          93 R   93 (121)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.71  E-value=0.13  Score=40.64  Aligned_cols=48  Identities=27%  Similarity=0.419  Sum_probs=40.5

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK-KFGVT  191 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~-~lg~~  191 (329)
                      -.|.+|+|.|.|.+|..+++++...|+ ++++++.+..+.+.+. ..|..
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCc
Confidence            469999999999999999999999999 8999998888876554 45543

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.69  E-value=0.44  Score=40.03  Aligned_cols=109  Identities=17%  Similarity=0.188  Sum_probs=69.2

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHhcCCceeeCCCCC----------------
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL--NPSRFNEAKKFGVTEFVNPKDY----------------  199 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~--~~~~~~~~~~lg~~~~~~~~~~----------------  199 (329)
                      +...++++..|+...+|+.|.+++..|+.+|.+-++.+..  +++|.+.++.+|++.+......                
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~  169 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLK  169 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHH
T ss_pred             HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHH
Confidence            3445666777666667999999999999999954444433  5578889999999754421110                


Q ss_pred             --------------Cch-------HHHHHHhhhcCCccEEEEecCCHHHHH---HHHHhhccCCeEEEEecc
Q 047713          200 --------------DKP-------VQQVIADMTNGGVDRSVECTGSVQAMI---SAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       200 --------------~~~-------~~~~~~~~~~~~~d~Vid~~g~~~~~~---~~~~~l~~~~G~vv~~g~  247 (329)
                                    +.+       ...++.+-.++.+|.|+-++|+...+.   ..++...+. -+++.+..
T Consensus       170 ~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~vep  240 (355)
T d1jbqa_         170 NEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVDP  240 (355)
T ss_dssp             HHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred             HhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeecc
Confidence                          000       122332323446899999999765544   334445555 67777754

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.68  E-value=0.074  Score=37.25  Aligned_cols=43  Identities=14%  Similarity=0.107  Sum_probs=35.7

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      +.+.....++++|+|.|+|.+|+-.++.++..|. +|..+...+
T Consensus        13 ~~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          13 LVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            3455667789999999999999999999999998 788887643

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=93.58  E-value=0.11  Score=42.99  Aligned_cols=102  Identities=14%  Similarity=0.120  Sum_probs=64.3

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc--eeeCCCCC---CchHHHHHHhhhcCCccE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT--EFVNPKDY---DKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~--~~~~~~~~---~~~~~~~~~~~~~~~~d~  217 (329)
                      ...++|||.|+|. |..+-.++++...++|.+++.+++-.+.++++-..  ..++...-   ..+..+.+++ +.+.+|+
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~-~~~~yDv  182 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNEFDV  182 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTCEEE
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHh-CCCCCCE
Confidence            4467999997754 55566777777767999999999999998885321  11111110   0125555654 3348999


Q ss_pred             EE-Ee---cC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          218 SV-EC---TG------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       218 Vi-d~---~g------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      || |.   .+      +.+.++.+-++|+++ |.++.-..
T Consensus       183 II~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~  221 (312)
T d2b2ca1         183 IITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGE  221 (312)
T ss_dssp             EEECCC-------------HHHHHHHHEEEE-EEEEEECC
T ss_pred             EEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecC
Confidence            87 32   21      223467788899998 98887643

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.52  E-value=0.046  Score=45.63  Aligned_cols=95  Identities=17%  Similarity=0.192  Sum_probs=53.2

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH---HHHhcCCceeeCCCCCCchHHHHHHhhh-c-CC
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFN---EAKKFGVTEFVNPKDYDKPVQQVIADMT-N-GG  214 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~---~~~~lg~~~~~~~~~~~~~~~~~~~~~~-~-~~  214 (329)
                      ..+.+|++||-+|+|. |..++.+|+ .|+++|++++.++....   .++..+....+.....+      +.++. . +.
T Consensus        29 ~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~------~~~~~~~~~~  100 (316)
T d1oria_          29 RHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGK------VEEVELPVEK  100 (316)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESC------TTTCCCSSSC
T ss_pred             cccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEecc------HHHcccccce
Confidence            3456799999998874 777766666 68779999998764322   22333432211110000      11111 2 37


Q ss_pred             ccEEEE-ecC----C----HHHHHHHHHhhccCCeEEE
Q 047713          215 VDRSVE-CTG----S----VQAMISAFECVHDGWGVAV  243 (329)
Q Consensus       215 ~d~Vid-~~g----~----~~~~~~~~~~l~~~~G~vv  243 (329)
                      +|+|+. ..+    .    ...+...-++|+++ |+++
T Consensus       101 ~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii  137 (316)
T d1oria_         101 VDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF  137 (316)
T ss_dssp             EEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             eEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence            898863 222    1    23344555789998 8765

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.51  E-value=0.026  Score=43.50  Aligned_cols=101  Identities=16%  Similarity=0.169  Sum_probs=61.6

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce-eeCCCCCCchHHHHHHhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTE-FVNPKDYDKPVQQVIADM  210 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~  210 (329)
                      |.+.....++++||-.|+|. |..++.+++ .+. +|++++.++...+.+++    .+... -+.....+  +   ....
T Consensus        44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d--~---~~~~  115 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD--L---YENV  115 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS--T---TTTC
T ss_pred             HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcc--h---hhhh
Confidence            56677888999999998753 555666665 344 89999999988877764    23211 01100011  1   1112


Q ss_pred             hcCCccEEEEe----cCC---HHHHHHHHHhhccCCeEEEEe
Q 047713          211 TNGGVDRSVEC----TGS---VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       211 ~~~~~d~Vid~----~g~---~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      .++.+|+|+-.    .+.   ...++.+.+.|+++ |+++..
T Consensus       116 ~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  156 (194)
T d1dusa_         116 KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV  156 (194)
T ss_dssp             TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence            23379999852    121   23467778889998 987654

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.47  E-value=0.58  Score=35.04  Aligned_cols=94  Identities=19%  Similarity=0.202  Sum_probs=56.2

Q ss_pred             eEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcC-C-hhhHHHHHhcCCceeeCCCCC----------CchHHHHHHhhhcC
Q 047713          147 SVAIFGLGAVGLAAAEGARVS-GASRIIGVDL-N-PSRFNEAKKFGVTEFVNPKDY----------DKPVQQVIADMTNG  213 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~-~-~~~~~~~~~lg~~~~~~~~~~----------~~~~~~~~~~~~~~  213 (329)
                      +|.|.|.|-+|+..+..+... .. .++++.. . ......+...+..........          ...+....     .
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----~   76 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----K   76 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----H
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-----h
Confidence            578999999999999988765 34 6666643 2 233334444443222211100          00111111     1


Q ss_pred             CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          214 GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       214 ~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ++|+|+||+|.....+.+-.++..+ -+++..+.
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~  109 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGG  109 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcC-CEEEEECC
Confidence            4899999999876777777788775 67776654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=93.43  E-value=0.14  Score=42.37  Aligned_cols=71  Identities=21%  Similarity=0.247  Sum_probs=44.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC--Ch---hhHHHHHhcCCceee--CCCCCCchHHHHHHhhhcC-CccE
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDL--NP---SRFNEAKKFGVTEFV--NPKDYDKPVQQVIADMTNG-GVDR  217 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~--~~---~~~~~~~~lg~~~~~--~~~~~~~~~~~~~~~~~~~-~~d~  217 (329)
                      +|||+|+ |-+|...+..+...|. .|++++.  ..   ++.+.++..+--..+  |..+     .+.+.++..+ ++|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~-----~~~l~~~~~~~~~d~   75 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN-----KNDVTRLITKYMPDS   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTC-----HHHHHHHHHHHCCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccCC-----HHHHHHHHHhcCCce
Confidence            6999987 9999999998888898 7888853  12   233344443322222  2222     1233444444 7899


Q ss_pred             EEEecC
Q 047713          218 SVECTG  223 (329)
Q Consensus       218 Vid~~g  223 (329)
                      ||.+++
T Consensus        76 Vih~aa   81 (338)
T d1orra_          76 CFHLAG   81 (338)
T ss_dssp             EEECCC
T ss_pred             EEeecc
Confidence            999875

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.40  E-value=0.092  Score=40.28  Aligned_cols=39  Identities=23%  Similarity=0.377  Sum_probs=34.5

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA  185 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~  185 (329)
                      ++|.|.|+|.+|...++++...|. .|+..+.+++.++.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence            589999999999999999999999 899999998766544

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.39  E-value=0.054  Score=41.13  Aligned_cols=38  Identities=26%  Similarity=0.385  Sum_probs=33.1

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      ....+++|+|+|+|+.|+.|+..|...|. +|+..+..+
T Consensus        39 ~~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            34557899999999999999999999999 899998754

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.37  E-value=0.1  Score=41.89  Aligned_cols=35  Identities=17%  Similarity=0.144  Sum_probs=29.0

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR  181 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~  181 (329)
                      .+.||+|+ +++|.+++..+...|+ +|+.++++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~   37 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEG   37 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchH
Confidence            35688886 9999999999999999 88888876543

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.19  E-value=0.025  Score=46.68  Aligned_cols=99  Identities=18%  Similarity=0.160  Sum_probs=60.9

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceee---CCCCCCchHHHHHHhhhc
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFV---NPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~---~~~~~~~~~~~~~~~~~~  212 (329)
                      .+.+++.+||-.|+|. |..++.+|+. |. +|++++.+++..+.+++.    +.....   +..+.+  +...-.....
T Consensus        52 l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  126 (292)
T d1xvaa_          52 LRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEAN--WLTLDKDVPA  126 (292)
T ss_dssp             HHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECC--GGGHHHHSCC
T ss_pred             hhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeecc--ccccccccCC
Confidence            3445678999888763 7788888875 77 899999999988776542    111100   000111  2111122223


Q ss_pred             C-CccEEEEecCC--------------HHHHHHHHHhhccCCeEEEE
Q 047713          213 G-GVDRSVECTGS--------------VQAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       213 ~-~~d~Vid~~g~--------------~~~~~~~~~~l~~~~G~vv~  244 (329)
                      . .+|.|+.....              ...+..+.+.|+|+ |.++.
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~  172 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI  172 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence            3 79998853211              12578888899998 98776

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=93.13  E-value=0.11  Score=38.90  Aligned_cols=73  Identities=15%  Similarity=0.134  Sum_probs=48.1

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eeeCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA-KKFGVT-EFVNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~-~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      ..++++|+|.|+|+++.+++..+...+. +++.+.++.++.+.+ +.++.. .+....     +    .+.....+|++|
T Consensus        15 ~~~~k~vlIlGaGGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~~~~~~~-----~----~~~~~~~~diiI   84 (171)
T d1p77a1          15 LRPNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVS-----M----DSIPLQTYDLVI   84 (171)
T ss_dssp             CCTTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGSCEEEEE-----G----GGCCCSCCSEEE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhccccchhh-----h----ccccccccceee
Confidence            3478899999999999999988776554 888888888876654 444321 111000     0    011123689999


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      +|+..
T Consensus        85 N~tp~   89 (171)
T d1p77a1          85 NATSA   89 (171)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99864

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.06  E-value=0.19  Score=35.25  Aligned_cols=41  Identities=22%  Similarity=0.371  Sum_probs=33.3

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      +...-.++++|+|.|+|.+|+-+++.+...|. +|..++..+
T Consensus        23 ~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          23 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             HHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            33344567899999999999999999999999 788886653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.97  E-value=0.049  Score=44.35  Aligned_cols=33  Identities=30%  Similarity=0.492  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      |++|+|+|+|..|++++..++..|. +|+.++.+
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence            5789999999999999999999999 89999864

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=92.96  E-value=0.31  Score=36.02  Aligned_cols=88  Identities=19%  Similarity=0.225  Sum_probs=58.2

Q ss_pred             eEEEEcCCHHHHH-HHHHHHHc-CCCEEEEEcCChhhHHH-HHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          147 SVAIFGLGAVGLA-AAEGARVS-GASRIIGVDLNPSRFNE-AKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       147 ~VlI~Gag~iG~a-ai~la~~~-G~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +|.|+|+|.+|.. .+..++.. +. .+++++.++++.+. .++++....++  +    +    +++....+|+|+-++.
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~--~----~----~~ll~~~iD~V~I~tp   71 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCT--D----Y----RDVLQYGVDAVMIHAA   71 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCS--S----T----TGGGGGCCSEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhcccccccc--c----H----HHhcccccceeccccc
Confidence            5788899999964 45555544 44 66778778776655 45677654432  1    1    1122225899999998


Q ss_pred             CHHHHHHHHHhhccCCeEEEEecc
Q 047713          224 SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       224 ~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ...+.+.+..++..  |.-+.+..
T Consensus        72 ~~~H~~~~~~al~~--gk~V~~EK   93 (167)
T d1xeaa1          72 TDVHSTLAAFFLHL--GIPTFVDK   93 (167)
T ss_dssp             GGGHHHHHHHHHHT--TCCEEEES
T ss_pred             cccccccccccccc--ccccccCC
Confidence            77788888888886  55566654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.91  E-value=0.085  Score=36.55  Aligned_cols=35  Identities=26%  Similarity=0.402  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS  180 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~  180 (329)
                      +.+|.|+|+|..|.+.++-|+.+|. ++++.+.++.
T Consensus        11 ~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~   45 (111)
T d1kjqa2          11 ATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYAD   45 (111)
T ss_dssp             CCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCC
Confidence            3469999999999999999999999 8888887654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.88  E-value=0.024  Score=43.85  Aligned_cols=92  Identities=20%  Similarity=0.318  Sum_probs=58.7

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCcee-eCCCCCCchHHHHHHhhh-cCCcc
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEF-VNPKDYDKPVQQVIADMT-NGGVD  216 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~-~~~~~~~~~~~~~~~~~~-~~~~d  216 (329)
                      ++| +||-+|+| .|..+..+++ .|. +|++++.+++..+.+++    .+.+.+ +...+        +.+.. .+.||
T Consensus        30 ~~g-rvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d--------~~~~~~~~~fD   97 (198)
T d2i6ga1          30 APG-RTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVD--------LNTLTFDGEYD   97 (198)
T ss_dssp             CSC-EEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECC--------TTTCCCCCCEE
T ss_pred             CCC-cEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhhee--------ccccccccccc
Confidence            444 89988987 6888888876 477 89999999988876553    343321 11111        11111 23799


Q ss_pred             EEEEecC-----C---HHHHHHHHHhhccCCeEEEEecc
Q 047713          217 RSVECTG-----S---VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       217 ~Vid~~g-----~---~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|+...-     .   ...+..+.++|+++ |.++....
T Consensus        98 ~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~  135 (198)
T d2i6ga1          98 FILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAA  135 (198)
T ss_dssp             EEEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EEEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            9885321     1   23567777889998 98887644

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=92.88  E-value=0.11  Score=43.16  Aligned_cols=101  Identities=17%  Similarity=0.165  Sum_probs=63.9

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC---ceeeCCCCC---CchHHHHHHhhhcCCcc
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV---TEFVNPKDY---DKPVQQVIADMTNGGVD  216 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~---~~~~~~~~~---~~~~~~~~~~~~~~~~d  216 (329)
                      ...++|||.|.|. |..+-.+++.....+|.+++.+++-.+.++++=.   ....+...-   ..+....+++ +.+.+|
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~-~~~~yD  153 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER-TEERYD  153 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH-CCCCEE
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHHHhhh-cCCccc
Confidence            3467999998753 6666677777666699999999998888876411   001100000   0125555554 334899


Q ss_pred             EEE-Ee---cC---------CHHHHHHHHHhhccCCeEEEEec
Q 047713          217 RSV-EC---TG---------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       217 ~Vi-d~---~g---------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      +|| |.   .+         +.+.++.+.+.|+++ |.++.-.
T Consensus       154 vIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~~  195 (312)
T d1uira_         154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQT  195 (312)
T ss_dssp             EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             EEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEec
Confidence            986 43   22         234678888999998 9877643

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.73  E-value=0.068  Score=42.70  Aligned_cols=35  Identities=26%  Similarity=0.296  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      ..++|+|+|+|+.|++++..++..|. +|++++.++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            46789999999999999999999999 899998643

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=92.56  E-value=0.23  Score=38.73  Aligned_cols=97  Identities=18%  Similarity=0.182  Sum_probs=61.4

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHH---cCCCEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhhcCC
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARV---SGASRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~---~G~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      ++++.+||-.|+|. |..+..+++.   .++ +|++++.+++..+.+++.    +....+.....+      ..+.....
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d------~~~~~~~~  108 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCND------IRHVEIKN  108 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSC------TTTCCCCS
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccch------hhcccccc
Confidence            57889999998863 7777777764   466 999999999988887652    221111111111      11222235


Q ss_pred             ccEEEEecC--------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          215 VDRSVECTG--------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       215 ~d~Vid~~g--------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|+++-...        ....++...+.|+|+ |.++....
T Consensus       109 ~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~~  148 (225)
T d1im8a_         109 ASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSEK  148 (225)
T ss_dssp             EEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeecccc
Confidence            676654322        124678888899998 99987643

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=92.50  E-value=0.093  Score=42.52  Aligned_cols=93  Identities=16%  Similarity=0.136  Sum_probs=64.6

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCcee--e-CCCCCCchHHHHHHhhhcCCccE
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAKKFGVTEF--V-NPKDYDKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~~lg~~~~--~-~~~~~~~~~~~~~~~~~~~~~d~  217 (329)
                      ..++.+||=+|+|. |..+..+++.. +. .+++++.+++..+.+++......  . +..+-         .+..+.+|+
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l---------~~~~~sfD~  150 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHRL---------PFSDTSMDA  150 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTSC---------SBCTTCEEE
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeehhhc---------cCCCCCEEE
Confidence            45678898888764 77777788765 45 89999999999888876443211  1 11111         111237999


Q ss_pred             EEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          218 SVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       218 Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      |+... .+..++...++|+++ |.++....
T Consensus       151 v~~~~-~~~~~~e~~rvLkpg-G~l~~~~p  178 (268)
T d1p91a_         151 IIRIY-APCKAEELARVVKPG-GWVITATP  178 (268)
T ss_dssp             EEEES-CCCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             EeecC-CHHHHHHHHHHhCCC-cEEEEEee
Confidence            99665 456788899999998 99888754

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=92.47  E-value=0.018  Score=43.03  Aligned_cols=90  Identities=12%  Similarity=0.124  Sum_probs=52.3

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce--eeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE--FVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +|+|+|+|.+|.+....+...|. .|..+++++++.+..+..+...  .......+  ....+     +.+|++|-++-.
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~D~iii~vka   73 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTAN--DPDFL-----ATSDLLLVTLKA   73 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEES--CHHHH-----HTCSEEEECSCG
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccc--hhhhh-----cccceEEEeecc
Confidence            58899999999999888888898 8999988776443322222211  00000000  11111     258999999865


Q ss_pred             HHHHHHHHH----hhccCCeEEEEec
Q 047713          225 VQAMISAFE----CVHDGWGVAVLVG  246 (329)
Q Consensus       225 ~~~~~~~~~----~l~~~~G~vv~~g  246 (329)
                      . ..+.+++    .+.++ ..++.+.
T Consensus        74 ~-~~~~~~~~l~~~~~~~-~~Iv~~q   97 (167)
T d1ks9a2          74 W-QVSDAVKSLASTLPVT-TPILLIH   97 (167)
T ss_dssp             G-GHHHHHHHHHTTSCTT-SCEEEEC
T ss_pred             c-chHHHHHhhccccCcc-cEEeecc
Confidence            4 3333333    34444 5566654

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=92.47  E-value=0.79  Score=37.12  Aligned_cols=109  Identities=16%  Similarity=0.119  Sum_probs=67.0

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHhcCCceeeCCCCC----------------
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL--NPSRFNEAKKFGVTEFVNPKDY----------------  199 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~--~~~~~~~~~~lg~~~~~~~~~~----------------  199 (329)
                      +...+.++.+|+...+|+.|++++..++.+|.+-++.+..  ++.+.+.++.+|++.++...+.                
T Consensus        53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             HhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc
Confidence            4445566666655567999999999999999853333322  6678888999998654322211                


Q ss_pred             ----------Cch-------HHHHHHhhhcCCccEEEEecCCHHHHHHH---HHhhccCCeEEEEecc
Q 047713          200 ----------DKP-------VQQVIADMTNGGVDRSVECTGSVQAMISA---FECVHDGWGVAVLVGV  247 (329)
Q Consensus       200 ----------~~~-------~~~~~~~~~~~~~d~Vid~~g~~~~~~~~---~~~l~~~~G~vv~~g~  247 (329)
                                +..       ...++.+-.++.+|.++-++|+...+.-.   ++...+. .+++.+..
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~-~~i~~Vep  199 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKP-VTIVGLQP  199 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSC-CEEEEEEE
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCc-ceEEEecc
Confidence                      000       11222222334689999999876655433   3444555 67766654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.42  E-value=0.16  Score=41.52  Aligned_cols=77  Identities=21%  Similarity=0.199  Sum_probs=44.4

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCE--EEEEcCChhhH----HHHHhcCC---c---eeeCCCCCCchHHHHHHhhhcC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASR--IIGVDLNPSRF----NEAKKFGV---T---EFVNPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~--vv~~~~~~~~~----~~~~~lg~---~---~~~~~~~~~~~~~~~~~~~~~~  213 (329)
                      .|||+|+ +++|.+++..+...|++.  |..+.++.++.    +.++++..   .   ...|..+. ++..+.+.+...+
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~g   82 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS-KSVAAARERVTEG   82 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH-HHHHHHHHTCTTS
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccch-Hhhhhhhhhcccc
Confidence            4567786 999999999888888842  33333443332    23344322   1   12233332 2344444454445


Q ss_pred             CccEEEEecCC
Q 047713          214 GVDRSVECTGS  224 (329)
Q Consensus       214 ~~d~Vid~~g~  224 (329)
                      .+|+++++.|.
T Consensus        83 ~idilvnnag~   93 (285)
T d1jtva_          83 RVDVLVCNAGL   93 (285)
T ss_dssp             CCSEEEECCCC
T ss_pred             chhhhhhcccc
Confidence            89999998873

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.35  E-value=1  Score=31.89  Aligned_cols=76  Identities=20%  Similarity=0.392  Sum_probs=46.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHH-cCCCEEEE-EcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          147 SVAIFGL-GAVGLAAAEGARV-SGASRIIG-VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~-~G~~~vv~-~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +|.|.|+ |-+|.++++.... .+. .+++ ++..                   +.   .    ......++|+|||++ 
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~~d~~-------------------~~---~----~~~~~~~~DvvIDFS-   52 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAELDAG-------------------DP---L----SLLTDGNTEVVIDFT-   52 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEEEECTT-------------------CC---T----HHHHTTTCSEEEECC-
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecC-------------------Cc---h----hhhccccCCEEEEcc-
Confidence            5789996 9999999887664 455 4443 3211                   11   1    111123578999988 


Q ss_pred             CHHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          224 SVQAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       224 ~~~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      .++.....++.+... |.-+.+|+++..
T Consensus        53 ~p~~~~~~~~~~~~~-~~~~ViGTTG~~   79 (135)
T d1yl7a1          53 HPDVVMGNLEFLIDN-GIHAVVGTTGFT   79 (135)
T ss_dssp             CTTTHHHHHHHHHHT-TCEEEECCCCCC
T ss_pred             cHHHHHHHHHHHHhc-CCCEEEeccccc
Confidence            455666666655555 666677765543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.12  E-value=0.13  Score=35.87  Aligned_cols=38  Identities=13%  Similarity=0.139  Sum_probs=31.9

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .++..++|+|.|+|.+|.-+++.++.+|. +|..+.+.+
T Consensus        18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            34456899999999999999999999999 888887543

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.95  E-value=0.3  Score=39.74  Aligned_cols=103  Identities=13%  Similarity=0.121  Sum_probs=64.0

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc--eeeCCCCC---CchHHHHHHhhhcCCcc
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT--EFVNPKDY---DKPVQQVIADMTNGGVD  216 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~--~~~~~~~~---~~~~~~~~~~~~~~~~d  216 (329)
                      ....++|||.|+|. |..+-.+++..+..++++++.+++-.+.++++-..  ...+...-   ..+....+++ +.+.+|
T Consensus        76 ~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~-~~~~yD  153 (285)
T d2o07a1          76 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ-NQDAFD  153 (285)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT-CSSCEE
T ss_pred             CcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhc-CCCCCC
Confidence            34568999997654 55566777777777999999999998888774210  00110000   0124455554 334899


Q ss_pred             EEE-EecC---------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          217 RSV-ECTG---------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       217 ~Vi-d~~g---------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|| |...         +.+.++.+-+.|+++ |.++.-..
T Consensus       154 vIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~  193 (285)
T d2o07a1         154 VIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQGE  193 (285)
T ss_dssp             EEEEECC-----------CHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEecc
Confidence            986 4331         123467778899998 98877643

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=91.86  E-value=0.069  Score=44.86  Aligned_cols=75  Identities=13%  Similarity=0.093  Sum_probs=47.5

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHhcC----Ccee-eCCCCCCchHHHHHHhhhcC-Cc
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFN-EAKKFG----VTEF-VNPKDYDKPVQQVIADMTNG-GV  215 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~-~~~~lg----~~~~-~~~~~~~~~~~~~~~~~~~~-~~  215 (329)
                      .|++|||+|+ |-+|..++..+...|. .|+++++.+.+.. ..+...    ...+ .|..+    . ..+.+.... .+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d----~-~~l~~~~~~~~~   80 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD----Q-NKLLESIREFQP   80 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC----H-HHHHHHHHHHCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhcccCCeEEEeeccC----h-Hhhhhhhhhchh
Confidence            4799999987 9999999999999999 7999987654322 222221    2111 12222    1 223333334 68


Q ss_pred             cEEEEecCC
Q 047713          216 DRSVECTGS  224 (329)
Q Consensus       216 d~Vid~~g~  224 (329)
                      |+|+.+++.
T Consensus        81 ~~v~~~aa~   89 (356)
T d1rkxa_          81 EIVFHMAAQ   89 (356)
T ss_dssp             SEEEECCSC
T ss_pred             hhhhhhhcc
Confidence            899888763

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=91.78  E-value=0.68  Score=34.31  Aligned_cols=101  Identities=22%  Similarity=0.270  Sum_probs=59.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEE-cC--ChhhHHHHHhcCCceeeCC-----CCCC----c---hH--HHHHHh
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGV-DL--NPSRFNEAKKFGVTEFVNP-----KDYD----K---PV--QQVIAD  209 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~-~~--~~~~~~~~~~lg~~~~~~~-----~~~~----~---~~--~~~~~~  209 (329)
                      +|.|.|-|-+|+++...+...+. .++++ +.  +.+...++-++-..+-...     .+..    .   .+  .+...+
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            57899999999999998887788 45555 32  3355555555432211000     0000    0   00  001112


Q ss_pred             hhc-C-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          210 MTN-G-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       210 ~~~-~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      +.. . ++|+|+||+|.-...+.+...+..+ .+-|.+..+.
T Consensus        81 i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP~  121 (169)
T d1dssg1          81 IPWSKAGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAPS  121 (169)
T ss_dssp             CCHHHHTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSCC
T ss_pred             CCccccCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCCc
Confidence            211 2 7999999999766777788888876 6555555543

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=91.64  E-value=0.56  Score=38.50  Aligned_cols=99  Identities=18%  Similarity=0.130  Sum_probs=63.6

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHhcCCceeeCCCC-----------------
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL--NPSRFNEAKKFGVTEFVNPKD-----------------  198 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~--~~~~~~~~~~lg~~~~~~~~~-----------------  198 (329)
                      +...+.++++|+...+|+.|++++..++..|.+.++.+..  ++.+.+.++.+|+..+.....                 
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~  133 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASD  133 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhh
Confidence            3445567777666567999999999999999864444433  556778888899865542111                 


Q ss_pred             -----------CCc-------hHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhc
Q 047713          199 -----------YDK-------PVQQVIADMTNGGVDRSVECTGSVQAMISAFECVH  236 (329)
Q Consensus       199 -----------~~~-------~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~  236 (329)
                                 ...       ....++.+..++.+|.|+-++|+...+.-....++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         134 PSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             TTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             cCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                       000       01223344444479999999998766665555553

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=91.63  E-value=0.36  Score=36.67  Aligned_cols=82  Identities=16%  Similarity=0.125  Sum_probs=53.2

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceee----CCCCC---CchHHHHHHhhhcCCccEEE
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFV----NPKDY---DKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~----~~~~~---~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      +|.|+|+|..|.+.+.++...|. .|....++++..+.+.+-+....+    ...+.   ..++.+.++     +.|+||
T Consensus         9 KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~-----~ad~ii   82 (189)
T d1n1ea2           9 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN-----GAEIIL   82 (189)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT-----TCSCEE
T ss_pred             eEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccC-----CCCEEE
Confidence            68999999999999998888887 788888898888877654421111    00000   011333322     479999


Q ss_pred             EecCCHHHHHHHHHhh
Q 047713          220 ECTGSVQAMISAFECV  235 (329)
Q Consensus       220 d~~g~~~~~~~~~~~l  235 (329)
                      -++.+ ..+...++.+
T Consensus        83 iavPs-~~~~~~~~~~   97 (189)
T d1n1ea2          83 FVIPT-QFLRGFFEKS   97 (189)
T ss_dssp             ECSCH-HHHHHHHHHH
T ss_pred             EcCcH-HHHHHHHHHH
Confidence            99954 5555555543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.55  E-value=0.15  Score=35.36  Aligned_cols=34  Identities=15%  Similarity=0.249  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .++++|.|+|.+|+-+++.+..+|. +|..+.+.+
T Consensus        22 p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAG   55 (117)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             CCeEEEECCCccceeeeeeeccccc-EEEEEEecc
Confidence            4789999999999999999999999 788886554

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.54  E-value=0.082  Score=33.95  Aligned_cols=34  Identities=21%  Similarity=0.381  Sum_probs=29.8

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS  180 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~  180 (329)
                      ++|.|.|+|..|.+.++-++.+|. ++.+.+.++.
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSC
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCC
Confidence            478999999999999999999999 7888876544

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.54  E-value=0.086  Score=42.48  Aligned_cols=31  Identities=19%  Similarity=0.355  Sum_probs=27.3

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      +|||+|+ |-+|...+..++..|. .|+++++.
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeech
Confidence            4899987 9999999999999998 89998764

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=91.49  E-value=0.12  Score=39.30  Aligned_cols=39  Identities=23%  Similarity=0.377  Sum_probs=33.9

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA  185 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~  185 (329)
                      ++|.|.|+|.+|...+.++...|. .|+..+.+++..+..
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence            578999999999999988888999 899999998876544

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=91.38  E-value=0.082  Score=38.70  Aligned_cols=83  Identities=8%  Similarity=-0.134  Sum_probs=49.0

Q ss_pred             EEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCHHHHH
Q 047713          150 IFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMI  229 (329)
Q Consensus       150 I~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~~~~~  229 (329)
                      ++|+|.+|.+.+..++..+. ...+..++.++.+.+.+.+.....+..+..            ...|+||-++. ++.+.
T Consensus         4 fIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~------------~~~DiVil~v~-d~~i~   69 (153)
T d2i76a2           4 FVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEKHP------------ELNGVVFVIVP-DRYIK   69 (153)
T ss_dssp             EESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCC------------C---CEEECSC-TTTHH
T ss_pred             EEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhhhh------------ccCcEEEEecc-chhhh
Confidence            56999999998876654333 344677888888877666554333332211            24799999995 46777


Q ss_pred             HHHHhhccCCeEEEEec
Q 047713          230 SAFECVHDGWGVAVLVG  246 (329)
Q Consensus       230 ~~~~~l~~~~G~vv~~g  246 (329)
                      .....++.....++.+.
T Consensus        70 ~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          70 TVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             HHHTTTCCSSCCEEECC
T ss_pred             HHHhhhcccceeeeecc
Confidence            77777764414445554

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.37  E-value=0.52  Score=35.79  Aligned_cols=36  Identities=25%  Similarity=0.386  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS  180 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~  180 (329)
                      .|.++.|+|.|.+|...+++++.+|. +++..+....
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~   81 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRA   81 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCC
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-cccccccccc
Confidence            48999999999999999999999999 8888876544

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.36  E-value=0.42  Score=31.82  Aligned_cols=71  Identities=20%  Similarity=0.307  Sum_probs=48.5

Q ss_pred             CCCCCeEEEEcCCHHHHHH-HHHHHHcCCCEEEEEcCCh-hhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEE
Q 047713          142 PKKGQSVAIFGLGAVGLAA-AEGARVSGASRIIGVDLNP-SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSV  219 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aa-i~la~~~G~~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vi  219 (329)
                      ....+++.+.|.|++|..+ +++++..|. .|.+.+... ...+.+++.|......+....      +     .+.|+|+
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~------i-----~~~d~vV   72 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAEEH------I-----EGASVVV   72 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCGGG------G-----TTCSEEE
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcccc------C-----CCCCEEE
Confidence            4556789999998889777 788899999 899998753 344566778886544332211      1     2478877


Q ss_pred             EecCC
Q 047713          220 ECTGS  224 (329)
Q Consensus       220 d~~g~  224 (329)
                      -+.+-
T Consensus        73 ~S~AI   77 (96)
T d1p3da1          73 VSSAI   77 (96)
T ss_dssp             ECTTS
T ss_pred             ECCCc
Confidence            66553

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=91.35  E-value=0.25  Score=39.19  Aligned_cols=35  Identities=29%  Similarity=0.467  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      ..+|+|.|+|++|..+++.+...|.+++..++.+.
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            56999999999999999999999999999988644

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=91.29  E-value=0.96  Score=29.50  Aligned_cols=66  Identities=20%  Similarity=0.345  Sum_probs=45.4

Q ss_pred             eEEEEcCCHHHHHH-HHHHHHcCCCEEEEEcCCh-hhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          147 SVAIFGLGAVGLAA-AEGARVSGASRIIGVDLNP-SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       147 ~VlI~Gag~iG~aa-i~la~~~G~~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +|-+.|.|++|..+ +++++..|+ .|.+.+..+ +..+.++++|+.........+  +         .+.|+|+-+.+-
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~--i---------~~~d~vV~SsAI   70 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSADN--W---------YDPDLVIKTPAV   70 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCTTS--C---------CCCSEEEECTTC
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecccc--c---------CCCCEEEEecCc
Confidence            46667988899855 578889999 999999866 455678899986544332221  1         247888766553

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.19  E-value=0.92  Score=32.87  Aligned_cols=92  Identities=17%  Similarity=0.324  Sum_probs=56.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCC-EEEEEcCCh--hh-HHHHHhcCCceeeCCCCCC-chHH----------------
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGAS-RIIGVDLNP--SR-FNEAKKFGVTEFVNPKDYD-KPVQ----------------  204 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~-~vv~~~~~~--~~-~~~~~~lg~~~~~~~~~~~-~~~~----------------  204 (329)
                      +|.|.|+ |.+|.-++.+.+...-+ +|++.+...  +. .+++++|....++..++.. ..+.                
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g~   82 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQ   82 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEESH
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccCh
Confidence            6889998 99999999999876322 566655433  22 2456778877766443221 0011                


Q ss_pred             HHHHhhhcC-CccEEEEecCCHHHHHHHHHhhccC
Q 047713          205 QVIADMTNG-GVDRSVECTGSVQAMISAFECVHDG  238 (329)
Q Consensus       205 ~~~~~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~  238 (329)
                      +.+.++... .+|+|+.+.-+-..+.-.+..++.+
T Consensus        83 ~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g  117 (151)
T d1q0qa2          83 QAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG  117 (151)
T ss_dssp             HHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT
T ss_pred             HHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC
Confidence            122222222 6788887776667777777777763

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.17  E-value=0.1  Score=41.24  Aligned_cols=36  Identities=28%  Similarity=0.366  Sum_probs=30.4

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR  181 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~  181 (329)
                      ++++||+|+ +++|.++++.+...|+ +|+.++++++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence            367899986 9999999999999999 89888876653

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.14  E-value=0.2  Score=37.69  Aligned_cols=38  Identities=21%  Similarity=0.249  Sum_probs=32.2

Q ss_pred             eEEEE-cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 047713          147 SVAIF-GLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA  185 (329)
Q Consensus       147 ~VlI~-Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~  185 (329)
                      +|.|+ |+|.+|.+.++.+...|+ +|+..++++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            47788 569999999999999999 788888998876654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.01  E-value=0.13  Score=42.19  Aligned_cols=38  Identities=24%  Similarity=0.317  Sum_probs=32.0

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .....++|+|+|+|..|+.++..+...|. +|+.++..+
T Consensus        26 ~~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            33456799999999999999999888898 899998653

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.96  E-value=0.56  Score=35.12  Aligned_cols=89  Identities=12%  Similarity=0.159  Sum_probs=58.6

Q ss_pred             eEEEEcCCHHHHHHHHHHHHc-CCCEEEEE-cCChhhHH-HHHhcCCce---eeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          147 SVAIFGLGAVGLAAAEGARVS-GASRIIGV-DLNPSRFN-EAKKFGVTE---FVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~-G~~~vv~~-~~~~~~~~-~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      ++.|+|.|.+|..-+..++.. +. .++++ +.++++.+ ..++++...   +++  +    +.+.+.   ...+|+|+-
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~--~----~~~ll~---~~~iD~v~I   72 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIHG--S----YESLLE---DPEIDALYV   72 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEES--S----HHHHHH---CTTCCEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeecC--c----HHHhhh---ccccceeee
Confidence            578889999998877777765 55 56654 55666544 355666421   221  1    333332   237999999


Q ss_pred             ecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          221 CTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       221 ~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ++......+.+..++..  |.-+.+..
T Consensus        73 ~tp~~~h~~~~~~~l~~--g~~v~~EK   97 (184)
T d1ydwa1          73 PLPTSLHVEWAIKAAEK--GKHILLEK   97 (184)
T ss_dssp             CCCGGGHHHHHHHHHTT--TCEEEECS
T ss_pred             cccchhhcchhhhhhhc--cceeeccc
Confidence            99887888888888886  56666654

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=90.92  E-value=0.77  Score=34.16  Aligned_cols=101  Identities=21%  Similarity=0.288  Sum_probs=56.0

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcC----CCEEEEEcC--ChhhHHHHHhcCCceeeCCC-----CCC-------c--hHHHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSG----ASRIIGVDL--NPSRFNEAKKFGVTEFVNPK-----DYD-------K--PVQQV  206 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G----~~~vv~~~~--~~~~~~~~~~lg~~~~~~~~-----~~~-------~--~~~~~  206 (329)
                      +|.|.|-|-+|.++...+...+    . .|+++..  +.+...++-++...+.-...     +..       -  .-.+.
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~-~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDI-EIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSE-EEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCe-EEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            4788899999999998765432    3 5666652  33444455443321110000     000       0  00001


Q ss_pred             HHhhhc-C-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          207 IADMTN-G-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       207 ~~~~~~-~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      ..++.. . ++|+|+||+|.-...+.+...|..+ .+-|.+..+.
T Consensus        82 p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~G-akkViiSAP~  125 (173)
T d1obfo1          82 PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGG-AKKVIISAPG  125 (173)
T ss_dssp             GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHT-CSEEEESSCC
T ss_pred             HHHCcccccccceEEEecccccCHHHHHHHhccC-CcceEEecCC
Confidence            122222 3 8999999999756667777788776 6656665543

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.91  E-value=0.24  Score=40.56  Aligned_cols=102  Identities=13%  Similarity=0.117  Sum_probs=63.7

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc--eeeCCCCC---CchHHHHHHhhhcCCccE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVT--EFVNPKDY---DKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~--~~~~~~~~---~~~~~~~~~~~~~~~~d~  217 (329)
                      ...++|||.|+|. |..+-.++++.+.++|.+++.+++-.+.++++-..  ..++...-   ..+..+.+++ ..+.+|+
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~-~~~~yDv  165 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK-FKNEFDV  165 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG-CSSCEEE
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhc-CCCCCCE
Confidence            3457999997653 45566777777777999999999988888774210  01111000   0124445544 2347999


Q ss_pred             EE-EecC----------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          218 SV-ECTG----------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       218 Vi-d~~g----------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      || |+..          +.+.++.+.+.|+++ |.++.-..
T Consensus       166 Ii~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~~  205 (295)
T d1inla_         166 IIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAETE  205 (295)
T ss_dssp             EEEEC----------CCSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             EEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEecC
Confidence            86 4321          234577888899998 98877543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=90.87  E-value=0.35  Score=40.06  Aligned_cols=98  Identities=16%  Similarity=0.174  Sum_probs=58.8

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh-cC-Ccc
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT-NG-GVD  216 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~-~~-~~d  216 (329)
                      .+|++||=.++|. |..++++|+  |+++|++++.+++..+.+++    .|.+.+- ....+  ..+.++.+. .+ .||
T Consensus       144 ~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~-~i~~d--~~~~~~~~~~~~~~fD  217 (318)
T d1wxxa2         144 FRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVR-VLEAN--AFDLLRRLEKEGERFD  217 (318)
T ss_dssp             CCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEE-EEESC--HHHHHHHHHHTTCCEE
T ss_pred             hCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcc-eeecc--HHHHhhhhHhhhcCCC
Confidence            4689998886532 333445554  33489999999998887764    4443211 11122  444444432 23 799


Q ss_pred             EEEE-e--cC--C----------HHHHHHHHHhhccCCeEEEEecc
Q 047713          217 RSVE-C--TG--S----------VQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       217 ~Vid-~--~g--~----------~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|+- .  .+  .          ...+..++++|+++ |.++.+..
T Consensus       218 ~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~sc  262 (318)
T d1wxxa2         218 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASC  262 (318)
T ss_dssp             EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             EEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            9873 2  11  0          13456778899998 99988765

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.81  E-value=0.072  Score=41.77  Aligned_cols=99  Identities=14%  Similarity=0.003  Sum_probs=62.7

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce---eeCCCCCCchHHHHHHhhh--cCC
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTE---FVNPKDYDKPVQQVIADMT--NGG  214 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~--~~~  214 (329)
                      ....++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++.....   .+.....+      +.++.  .+.
T Consensus        56 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d------~~~~~~~~~~  127 (222)
T d2ex4a1          56 PNKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCG------LQDFTPEPDS  127 (222)
T ss_dssp             --CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECC------GGGCCCCSSC
T ss_pred             cCCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccccccccc------cccccccccc
Confidence            3456778999998864 7777777766665 8999999999988887643211   11111111      22222  237


Q ss_pred             ccEEEEecC-----CH---HHHHHHHHhhccCCeEEEEecc
Q 047713          215 VDRSVECTG-----SV---QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       215 ~d~Vid~~g-----~~---~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +|+|+....     .+   ..+..+.+.|+++ |.++....
T Consensus       128 fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~~  167 (222)
T d2ex4a1         128 YDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKDN  167 (222)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEEc
Confidence            999985322     11   3567778889998 98887743

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=90.78  E-value=0.31  Score=40.42  Aligned_cols=71  Identities=15%  Similarity=0.228  Sum_probs=43.6

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC----ChhhHHHHHhc---CCcee-eCCCCCCchHHHHHHhhhcC-Ccc
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDL----NPSRFNEAKKF---GVTEF-VNPKDYDKPVQQVIADMTNG-GVD  216 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~----~~~~~~~~~~l---g~~~~-~~~~~~~~~~~~~~~~~~~~-~~d  216 (329)
                      +|||+|+ |-+|...+..+...|. .|+++++    ........+.+   +...+ .|..+    . +.+.+.... ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~-~~l~~~~~~~~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN----E-ALMTEILHDHAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC----H-HHHHHHHHHTTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCC----H-HHHHHHHhccCCC
Confidence            4899987 9999999999998998 7888864    22222322222   23222 23222    2 233333333 799


Q ss_pred             EEEEecC
Q 047713          217 RSVECTG  223 (329)
Q Consensus       217 ~Vid~~g  223 (329)
                      +||.+++
T Consensus        76 ~ViHlAa   82 (338)
T d1udca_          76 TVIHFAG   82 (338)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            9999875

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.74  E-value=0.16  Score=39.90  Aligned_cols=37  Identities=32%  Similarity=0.279  Sum_probs=32.3

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      -..+++|+|+|+|+.|+.++..++..|. .|..++.++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeecc
Confidence            3568899999999999999999999999 888887655

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=90.71  E-value=0.37  Score=38.41  Aligned_cols=101  Identities=11%  Similarity=-0.071  Sum_probs=65.6

Q ss_pred             hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-ceeeCCCCCCchHHHHHHhhh--cC
Q 047713          137 VNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV-TEFVNPKDYDKPVQQVIADMT--NG  213 (329)
Q Consensus       137 ~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~--~~  213 (329)
                      .......++.+||=.|+|. |..+..+|...+. .|.+++.+++-.+.+++.-. ...+.....+      +.++.  .+
T Consensus        86 l~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d------~~~~~~~~~  157 (254)
T d1xtpa_          86 IASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFILAS------METATLPPN  157 (254)
T ss_dssp             HHTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEESC------GGGCCCCSS
T ss_pred             HhhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEEcc------ccccccCCC
Confidence            3445566778899888874 8888888876665 89999999999888876422 1222111111      22222  23


Q ss_pred             CccEEEEecC----C-H---HHHHHHHHhhccCCeEEEEec
Q 047713          214 GVDRSVECTG----S-V---QAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       214 ~~d~Vid~~g----~-~---~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .+|+|+-.--    . +   ..+..+.+.|+++ |.++...
T Consensus       158 ~fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e  197 (254)
T d1xtpa_         158 TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKE  197 (254)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEe
Confidence            7999974332    1 1   3467788889998 9888754

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=90.69  E-value=0.25  Score=39.85  Aligned_cols=36  Identities=19%  Similarity=0.216  Sum_probs=26.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHH
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGV-DLNPSRFN  183 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~-~~~~~~~~  183 (329)
                      .+||+|+ +++|.++++.+...|+ +|+.+ .+++++.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~   41 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEAN   41 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHH
Confidence            4577776 9999999999999999 66654 44555443

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.67  E-value=0.21  Score=37.44  Aligned_cols=41  Identities=20%  Similarity=0.227  Sum_probs=32.1

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA  185 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~  185 (329)
                      -+|++|||.|+|+++.+++..+...|  ++..+.++.++.+.+
T Consensus        16 ~~~k~vlIlGaGG~arai~~aL~~~~--~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          16 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSHHHHHHH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHcccc--ceeeehhhhhHHHHH
Confidence            46899999999999998887665443  788888888776543

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.67  E-value=0.15  Score=40.60  Aligned_cols=34  Identities=38%  Similarity=0.466  Sum_probs=30.6

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL  177 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~  177 (329)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++++-
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD   62 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSD   62 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeec
Confidence            469999999999999999999999999 8887764

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=90.62  E-value=0.48  Score=35.85  Aligned_cols=45  Identities=16%  Similarity=0.123  Sum_probs=35.9

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG  189 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg  189 (329)
                      .+.+|.|.|.|.+|...++.++.+|. +|+..+.........+..+
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~   87 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELN   87 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHT
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccc
Confidence            58899999999999999999999999 8999987544444433333

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=90.59  E-value=0.36  Score=38.04  Aligned_cols=90  Identities=19%  Similarity=0.197  Sum_probs=57.2

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhh-cCCccE
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMT-NGGVDR  217 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~-~~~~d~  217 (329)
                      .++.+||=.|+| .|..+..+++. |. +|++++.+++..+.+++    .+...-+..  .+      +.++. .+.+|+
T Consensus        36 ~~~~~vLDiGCG-~G~~~~~l~~~-g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~--~d------~~~~~~~~~fD~  104 (246)
T d1y8ca_          36 LVFDDYLDLACG-TGNLTENLCPK-FK-NTWAVDLSQEMLSEAENKFRSQGLKPRLAC--QD------ISNLNINRKFDL  104 (246)
T ss_dssp             CCTTEEEEETCT-TSTTHHHHGGG-SS-EEEEECSCHHHHHHHHHHHHHTTCCCEEEC--CC------GGGCCCSCCEEE
T ss_pred             CCCCeEEEEeCc-CCHHHHHHHHh-CC-ccEeeccchhhhhhccccccccCccceeec--cc------hhhhcccccccc
Confidence            346789999887 47777777764 66 89999999998777654    232211111  11      22232 337999


Q ss_pred             EEEecCC------H----HHHHHHHHhhccCCeEEEE
Q 047713          218 SVECTGS------V----QAMISAFECVHDGWGVAVL  244 (329)
Q Consensus       218 Vid~~g~------~----~~~~~~~~~l~~~~G~vv~  244 (329)
                      |+-..+.      .    ..+..+.++|+++ |.++.
T Consensus       105 i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~  140 (246)
T d1y8ca_         105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF  140 (246)
T ss_dssp             EEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred             cceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence            9843221      1    2466777789998 98774

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.57  E-value=0.15  Score=40.97  Aligned_cols=41  Identities=20%  Similarity=0.206  Sum_probs=31.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHH-HHH--cCCCEEEEEcCChhhHHHH
Q 047713          144 KGQSVAIFGL-GAVGLAAAEG-ARV--SGASRIIGVDLNPSRFNEA  185 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~l-a~~--~G~~~vv~~~~~~~~~~~~  185 (329)
                      .|+.++|+|+ +++|.++++. |+.  .|+ +|+.+++++++.+.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~   49 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQL   49 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHH
Confidence            4778888886 9999988774 443  588 899999998887654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=90.47  E-value=1.6  Score=31.32  Aligned_cols=75  Identities=7%  Similarity=0.045  Sum_probs=48.4

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHh---cCCceeeCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF-NEAKK---FGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~-~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      +.++|.|.|.+|..+++.+...|. .|++++.++++. +.+++   .|...+.-  +..  -...+++..-..+|.|+-+
T Consensus         4 nHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi~G--d~~--d~~~L~~a~i~~a~~vi~~   78 (153)
T d1id1a_           4 DHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIPG--DSN--DSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEES--CTT--SHHHHHHHTTTTCSEEEEC
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEEEc--cCc--chHHHHHhccccCCEEEEc
Confidence            468899999999999999999998 677777776542 23332   34433331  111  1234444433478999988


Q ss_pred             cCCH
Q 047713          222 TGSV  225 (329)
Q Consensus       222 ~g~~  225 (329)
                      ++..
T Consensus        79 ~~~d   82 (153)
T d1id1a_          79 SDND   82 (153)
T ss_dssp             SSCH
T ss_pred             cccH
Confidence            7654

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=90.47  E-value=0.43  Score=39.48  Aligned_cols=100  Identities=15%  Similarity=0.112  Sum_probs=61.1

Q ss_pred             cCCCCCCeEEEEcC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CC--ceeeCCCCCCchHHHHHHhhh
Q 047713          140 AKPKKGQSVAIFGL--GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GV--TEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       140 ~~~~~g~~VlI~Ga--g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~--~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      ..+.+|++||=..+  |++++++    ...|++.|++++.++...+.+++.    |.  +.+ ..-..+  ..+.++...
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl~a----a~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~-~~i~~d--~~~~l~~~~  212 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSVAA----AMGGAMATTSVDLAKRSRALSLAHFEANHLDMANH-QLVVMD--VFDYFKYAR  212 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHHHH----HHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTE-EEEESC--HHHHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHHHH----HhCCCceEEEecCCHHHHHHHHHHHHHhcccCcce-EEEEcc--HHHHHHHHH
Confidence            35678999998743  6555432    236777899999999888877642    22  111 001122  445555432


Q ss_pred             -cC-CccEEE-Eec--C------------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          212 -NG-GVDRSV-ECT--G------------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 -~~-~~d~Vi-d~~--g------------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                       .+ .||+|| |.=  +            -...+..++++|+++ |.++.+..
T Consensus       213 ~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~sc  264 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTN  264 (317)
T ss_dssp             HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             hhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeC
Confidence             23 799987 321  1            113566788899998 98887764

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=90.44  E-value=1.6  Score=33.27  Aligned_cols=97  Identities=16%  Similarity=0.094  Sum_probs=62.4

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNE----AKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~----~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      +..||-+|+|. |..++.+|+..--..+++++.++.....    +++.+.+.+..... +  .......+..+.+|.|+-
T Consensus        30 ~PlvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~-D--a~~l~~~~~~~~~d~v~i  105 (204)
T d2fcaa1          30 NPIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI-D--ADTLTDVFEPGEVKRVYL  105 (204)
T ss_dssp             CCEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC-C--GGGHHHHCCTTSCCEEEE
T ss_pred             CceEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc-c--hhhhhcccCchhhhcccc
Confidence            44566678874 8889999998754599999999887654    34566653322111 1  222222233347888764


Q ss_pred             ecCC--------------HHHHHHHHHhhccCCeEEEEec
Q 047713          221 CTGS--------------VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       221 ~~g~--------------~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ....              +..++...+.|+++ |.+....
T Consensus       106 ~fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~T  144 (204)
T d2fcaa1         106 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFKT  144 (204)
T ss_dssp             ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEEE
T ss_pred             ccccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEEE
Confidence            4332              35788888999998 9987763

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=90.44  E-value=1.7  Score=32.07  Aligned_cols=44  Identities=14%  Similarity=0.185  Sum_probs=37.3

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV  190 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~  190 (329)
                      .+|-++|.|.+|...+.-+...|. .|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            468889999999998888888898 89999999999888776554

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.39  E-value=0.23  Score=34.74  Aligned_cols=34  Identities=24%  Similarity=0.442  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .++++|+|+|.+|+-.++++..+|. +|..+...+
T Consensus        23 p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            3689999999999999999999999 888886543

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.37  E-value=0.17  Score=42.23  Aligned_cols=38  Identities=32%  Similarity=0.475  Sum_probs=28.2

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      ..+.+|++||-+|+|. |..++.+|+ .|+++|++++.++
T Consensus        34 ~~~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~   71 (328)
T d1g6q1_          34 KDLFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSS   71 (328)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESST
T ss_pred             cccCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCH
Confidence            3456789999998863 666655554 6777999999886

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=90.35  E-value=0.23  Score=34.56  Aligned_cols=33  Identities=18%  Similarity=0.277  Sum_probs=29.1

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      .++++|+|+|.+|+-.++.++.+|. +|..+...
T Consensus        22 p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~   54 (119)
T d3lada2          22 PGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAM   54 (119)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCeEEEECCChHHHHHHHHHHHcCC-ceEEEEee
Confidence            4889999999999999999999999 78777654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=90.34  E-value=0.23  Score=41.77  Aligned_cols=33  Identities=24%  Similarity=0.245  Sum_probs=27.5

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      +.|||+|+ |-+|..++..+...|. .|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            57899986 9999999998888898 899998743

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.33  E-value=0.086  Score=43.64  Aligned_cols=31  Identities=26%  Similarity=0.317  Sum_probs=27.0

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL  177 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~  177 (329)
                      ++|||+|+ |-+|...+..+...|. .|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            57999987 9999999998888898 7888864

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.26  E-value=0.27  Score=35.00  Aligned_cols=38  Identities=18%  Similarity=0.247  Sum_probs=32.7

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .++++++|+|.|+|.+|+-++..++..|. .|..++..+
T Consensus        31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~   68 (133)
T d1q1ra2          31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAA   68 (133)
T ss_dssp             TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeecc
Confidence            34567899999999999999999999999 888887654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.24  E-value=0.22  Score=34.46  Aligned_cols=34  Identities=21%  Similarity=0.255  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .++|+|.|+|.+|+-+++.++.+|. +|..+.+.+
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecc
Confidence            4689999999999999999999999 888887654

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.21  E-value=0.93  Score=33.50  Aligned_cols=100  Identities=17%  Similarity=0.196  Sum_probs=55.8

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHhcCCceee-----CCCCCC----c-----hHHHHHHhh
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDL--NPSRFNEAKKFGVTEFV-----NPKDYD----K-----PVQQVIADM  210 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~--~~~~~~~~~~lg~~~~~-----~~~~~~----~-----~~~~~~~~~  210 (329)
                      +|.|.|-|-+|.++.+.+...+. .++++.-  +.+...++-++...+--     ...+..    .     .-.+...++
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i   80 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI   80 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred             EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHHC
Confidence            57889999999999998877788 5655533  22334444444322110     000000    0     000011222


Q ss_pred             hcC--CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          211 TNG--GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       211 ~~~--~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      ...  ++|+|+||+|.-...+.+...+..+ .+=|.+..+
T Consensus        81 ~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP  119 (168)
T d2g82a1          81 PWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAP  119 (168)
T ss_dssp             CTGGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSC
T ss_pred             cccccCCceeEeccccccchHHhhhhhccc-cceeeeccc
Confidence            222  7999999999766667777778765 544444443

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.21  E-value=0.51  Score=38.12  Aligned_cols=97  Identities=19%  Similarity=0.221  Sum_probs=60.4

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-Cce------------eeCCCCCCchHHHHHHh
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFG-VTE------------FVNPKDYDKPVQQVIAD  209 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg-~~~------------~~~~~~~~~~~~~~~~~  209 (329)
                      .+.++|||.|+|. |..+-.+++. ...+|.+++.+++-.+.++++- ...            -+.....+  ....+++
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~D--a~~~l~~  146 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGD--GFEFIKN  146 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESC--HHHHHHH
T ss_pred             CCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEECh--HHHHHhc
Confidence            4567999997653 3444455554 4458999999999988888742 110            00000112  4445543


Q ss_pred             hhcCCccEEE-EecC---------CHHHHHHHHHhhccCCeEEEEec
Q 047713          210 MTNGGVDRSV-ECTG---------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       210 ~~~~~~d~Vi-d~~g---------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                        .+++|+|| |...         +.+.++.+-+.|+++ |.++.-.
T Consensus       147 --~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~  190 (276)
T d1mjfa_         147 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  190 (276)
T ss_dssp             --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             --cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEec
Confidence              34899986 4432         134578888999998 9887654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.13  E-value=0.11  Score=41.00  Aligned_cols=74  Identities=23%  Similarity=0.279  Sum_probs=43.7

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCCcee-eCCCCCCchHHHHHHhhhcCCccEEEEe
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKFGVTEF-VNPKDYDKPVQQVIADMTNGGVDRSVEC  221 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~d~Vid~  221 (329)
                      +.+|||+|+ |-+|..+++.+...|. .+|+++++++.+...-..-..... .|..+    . +.+.+.. .++|+|+.+
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~----~-~~~~~~~-~~~d~vi~~   87 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK----L-DDYASAF-QGHDVGFCC   87 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG----G-GGGGGGG-SSCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc----c-ccccccc-ccccccccc
Confidence            578999987 9999999998876663 478888876543221111111111 22211    1 1122221 268999999


Q ss_pred             cCC
Q 047713          222 TGS  224 (329)
Q Consensus       222 ~g~  224 (329)
                      +|.
T Consensus        88 ~~~   90 (232)
T d2bkaa1          88 LGT   90 (232)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.07  E-value=0.53  Score=33.16  Aligned_cols=74  Identities=18%  Similarity=0.237  Sum_probs=48.7

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      +|.|+|+ |-+|++..++++..+.+.+..++.+..           ..                  -..+|+|+|.+ .+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~-----------~~------------------~~~~DVvIDFS-~p   51 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-----------EE------------------LDSPDVVIDFS-SP   51 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-----------EE------------------CSCCSEEEECS-CG
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH-----------HH------------------hccCCEEEEec-CH
Confidence            5889997 999999999999888844444432110           00                  02479999999 55


Q ss_pred             HHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          226 QAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       226 ~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      +.....++.+... +.-+.+|++...
T Consensus        52 ~~~~~~l~~~~~~-~~p~ViGTTG~~   76 (128)
T d1vm6a3          52 EALPKTVDLCKKY-RAGLVLGTTALK   76 (128)
T ss_dssp             GGHHHHHHHHHHH-TCEEEECCCSCC
T ss_pred             HHHHHHHHHHHhc-CCCEEEEcCCCC
Confidence            6666666655554 666777776543

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.99  E-value=0.13  Score=40.58  Aligned_cols=33  Identities=21%  Similarity=0.409  Sum_probs=28.0

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .|+|+|+|..|+.++..++..|.+.|++++.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            589999999999999999889974688887653

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.90  E-value=0.59  Score=39.54  Aligned_cols=92  Identities=15%  Similarity=0.121  Sum_probs=60.4

Q ss_pred             EcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceee--------------CCCCCCchHHHHHHhhhc
Q 047713          151 FGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF----GVTEFV--------------NPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       151 ~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l----g~~~~~--------------~~~~~~~~~~~~~~~~~~  212 (329)
                      .+-+.+|.-++.+|+..|++.|++.+.+++..+.+++-    +.....              .....+  ....+.+ .+
T Consensus        51 D~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~D--a~~~~~~-~~  127 (375)
T d2dula1          51 DALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDD--ANRLMAE-RH  127 (375)
T ss_dssp             ESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESC--HHHHHHH-ST
T ss_pred             EcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhh--hhhhhHh-hc
Confidence            35566788889999988988999999999988887642    221110              000111  3222222 22


Q ss_pred             CCccEE-EEecCC-HHHHHHHHHhhccCCeEEEEec
Q 047713          213 GGVDRS-VECTGS-VQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       213 ~~~d~V-id~~g~-~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ..||+| +|+.|+ .+.++.+++.++.+ |.+....
T Consensus       128 ~~fDvIDiDPfGs~~pfldsAi~a~~~~-Gll~vTa  162 (375)
T d2dula1         128 RYFHFIDLDPFGSPMEFLDTALRSAKRR-GILGVTA  162 (375)
T ss_dssp             TCEEEEEECCSSCCHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CcCCcccCCCCCCcHHHHHHHHHHhccC-CEEEEEe
Confidence            379976 899997 45678999999986 6665553

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.88  E-value=0.64  Score=33.60  Aligned_cols=39  Identities=21%  Similarity=0.253  Sum_probs=29.7

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAK  186 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~  186 (329)
                      +|-|+|.|.+|++.+.-++..|. .+++.....++....+
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHh
Confidence            47788999999999998888898 7777766555544433

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.71  E-value=0.29  Score=40.43  Aligned_cols=32  Identities=22%  Similarity=0.160  Sum_probs=28.3

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      +++||+|+ |-+|..++..+...|. .|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            57899987 9999999999988999 89998863

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=89.69  E-value=0.18  Score=38.86  Aligned_cols=35  Identities=31%  Similarity=0.472  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .|.+|.|+|.|.+|..++++++.+|. +|++.+...
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~   78 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYP   78 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCcc
Confidence            47899999999999999999999999 899987643

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.56  E-value=0.19  Score=40.13  Aligned_cols=33  Identities=21%  Similarity=0.345  Sum_probs=28.2

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .|+|+|+|+.|++++.+++..|...|++++.++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            589999999999999999999975777777654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.33  E-value=0.24  Score=34.67  Aligned_cols=32  Identities=16%  Similarity=0.021  Sum_probs=27.8

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL  177 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~  177 (329)
                      .++++|+|+|.+|+-.+++++.+|. +|..+.+
T Consensus        20 P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~   51 (122)
T d1h6va2          20 PGKTLVVGASYVALECAGFLAGIGL-DVTVMVR   51 (122)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred             CCeEEEECCCccHHHHHHHHhhcCC-eEEEEEe
Confidence            4689999999999999999999999 6766654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.21  E-value=0.22  Score=40.89  Aligned_cols=36  Identities=33%  Similarity=0.395  Sum_probs=30.8

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      ++..+|+|+|+|..|+.|+..+...|. +|++.+.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            445679999999999999999999999 899987643

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=89.17  E-value=1.6  Score=32.17  Aligned_cols=95  Identities=20%  Similarity=0.152  Sum_probs=51.8

Q ss_pred             CCCCCCeEEEEcC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eeeCCCCCCchHHHHHHhhhcC
Q 047713          141 KPKKGQSVAIFGL--GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVT-EFVNPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       141 ~~~~g~~VlI~Ga--g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~  213 (329)
                      .+.+|.+||=.++  |.+|+   . |...|+ .++.++.+++..+.+++    ++.. .+... +.+ .+... .....+
T Consensus        38 ~~~~g~~vLDl~~G~G~~~i---~-a~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~-~~d-~~~~~-~~~~~~  109 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVGL---E-AASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVAL-PVE-VFLPE-AKAQGE  109 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHH---H-HHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECS-CHH-HHHHH-HHHTTC
T ss_pred             cccCCCeEEEeccccchhhh---h-hhhccc-hhhhcccCHHHHhhhhHHHHhhccccceeee-ehh-ccccc-ccccCC
Confidence            4567889887744  65554   3 233588 78899999998876643    4543 23222 111 11111 122223


Q ss_pred             CccEEE-Ee---cCCHHHHHHHHH--hhccCCeEEEE
Q 047713          214 GVDRSV-EC---TGSVQAMISAFE--CVHDGWGVAVL  244 (329)
Q Consensus       214 ~~d~Vi-d~---~g~~~~~~~~~~--~l~~~~G~vv~  244 (329)
                      .||+|| |.   .+....+...+.  +++++ |.++.
T Consensus       110 ~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi  145 (171)
T d1ws6a1         110 RFTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL  145 (171)
T ss_dssp             CEEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred             ccceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence            799997 42   222334444433  47776 76554

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.12  E-value=1.5  Score=32.57  Aligned_cols=83  Identities=11%  Similarity=0.091  Sum_probs=47.2

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC--hhhHHHHHhcCCceeeCCCCC------CchHHHHHHhhhcCCccEE
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLN--PSRFNEAKKFGVTEFVNPKDY------DKPVQQVIADMTNGGVDRS  218 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~--~~~~~~~~~lg~~~~~~~~~~------~~~~~~~~~~~~~~~~d~V  218 (329)
                      .|.|+|+|..|.+.+..+...|. .|....++  ++..+.+.+-.....+.....      ..+....+     .+.|+|
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~ad~I   75 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL-----ENAEVV   75 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH-----TTCSEE
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH-----hccchh
Confidence            47889999999999998888887 78777653  233333333221111100000      01122222     248999


Q ss_pred             EEecCCHHHHHHHHHhhc
Q 047713          219 VECTGSVQAMISAFECVH  236 (329)
Q Consensus       219 id~~g~~~~~~~~~~~l~  236 (329)
                      +.++.+ ..+...++.+.
T Consensus        76 i~avps-~~~~~~~~~l~   92 (180)
T d1txga2          76 LLGVST-DGVLPVMSRIL   92 (180)
T ss_dssp             EECSCG-GGHHHHHHHHT
T ss_pred             hcccch-hhhHHHHHhhc
Confidence            999965 45555555444

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.05  E-value=0.27  Score=40.09  Aligned_cols=32  Identities=28%  Similarity=0.441  Sum_probs=29.6

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEc
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVD  176 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~  176 (329)
                      .|.+|+|.|.|.+|..+++.+...|+ +|++++
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            58899999999999999999999999 888876

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=89.02  E-value=0.066  Score=39.91  Aligned_cols=99  Identities=17%  Similarity=0.193  Sum_probs=51.3

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVS-GASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~-G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +|.|+|+ |-+|+++++.+... +.+.+-++++.... ..-+.+|.-.........  ....+.+ .....|+++|.+ .
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~-~~g~d~~~~~~~~~~~~~--~~~~~~~-~~~~~DViIDFs-~   80 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSS-LLGSDAGELAGAGKTGVT--VQSSLDA-VKDDFDVFIDFT-R   80 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCT-TCSCCTTCSSSSSCCSCC--EESCSTT-TTTSCSEEEECS-C
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccch-hccchhhhhhccccCCce--eeccHHH-HhcccceEEEec-c
Confidence            5778897 99999999988764 55223333322211 100111100000000000  0000001 112589999999 6


Q ss_pred             HHHHHHHHHhhccCCeEEEEeccCCCC
Q 047713          225 VQAMISAFECVHDGWGVAVLVGVPNKD  251 (329)
Q Consensus       225 ~~~~~~~~~~l~~~~G~vv~~g~~~~~  251 (329)
                      ++.....++..... +.-+.+|.++..
T Consensus        81 p~~~~~~~~~a~~~-~~~~ViGTTG~~  106 (162)
T d1diha1          81 PEGTLNHLAFCRQH-GKGMVIGTTGFD  106 (162)
T ss_dssp             HHHHHHHHHHHHHT-TCEEEECCCCCC
T ss_pred             HHHHHHHHHHHHhc-cceeEEecCCCc
Confidence            67766666766665 777888876653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=88.97  E-value=0.3  Score=34.31  Aligned_cols=33  Identities=24%  Similarity=0.320  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      .++++|.|+|.+|+-.++.++.+|. +|..+...
T Consensus        26 p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~   58 (125)
T d1ojta2          26 PGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMM   58 (125)
T ss_dssp             CSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred             CCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEee
Confidence            5899999999999999999999999 78888654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.92  E-value=0.23  Score=40.74  Aligned_cols=45  Identities=20%  Similarity=0.256  Sum_probs=34.1

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHHhcCCc
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP--SRFNEAKKFGVT  191 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~--~~~~~~~~lg~~  191 (329)
                      ++|||+|+ |-+|..++..+...|. +|+++++..  ...+.++.++..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~~   48 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIE   48 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCG
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhccc
Confidence            48999987 9999999998888898 888887643  234555556543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=88.92  E-value=0.26  Score=37.68  Aligned_cols=36  Identities=33%  Similarity=0.456  Sum_probs=32.1

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      -.|.+|.|+|.|.+|...+++++.+|. +|++.+...
T Consensus        47 L~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~   82 (193)
T d1mx3a1          47 IRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYL   82 (193)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTS
T ss_pred             eeCceEEEeccccccccceeeeecccc-ceeeccCcc
Confidence            358899999999999999999999999 898887643

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=88.92  E-value=0.22  Score=39.62  Aligned_cols=33  Identities=24%  Similarity=0.483  Sum_probs=27.9

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      +.|||+|+ +++|.+++..+...|+ +|+.+++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~   35 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRD   35 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCh
Confidence            35788986 9999999999999999 788887754

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=88.89  E-value=0.35  Score=37.92  Aligned_cols=34  Identities=21%  Similarity=0.292  Sum_probs=29.6

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      +-.+|+|+|+|..|++++..+...|. +|..++..
T Consensus         5 ~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            34579999999999999999999999 89998753

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=88.88  E-value=0.66  Score=36.00  Aligned_cols=91  Identities=18%  Similarity=0.166  Sum_probs=57.6

Q ss_pred             eEEEEcCCHHHH-HHHHHHH-HcCCCEEEEEcCChhhHH-HHHhcCCce--eeCCCCCCchHHHHHHhhhcC-CccEEEE
Q 047713          147 SVAIFGLGAVGL-AAAEGAR-VSGASRIIGVDLNPSRFN-EAKKFGVTE--FVNPKDYDKPVQQVIADMTNG-GVDRSVE  220 (329)
Q Consensus       147 ~VlI~Gag~iG~-aai~la~-~~G~~~vv~~~~~~~~~~-~~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~-~~d~Vid  220 (329)
                      +|.|+|+|.+|. ..+...+ .-+.+.+-++++++++.+ ..++++...  +..+.+        ++++... .+|+|+-
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d--------~~ell~~~~iD~V~I  106 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN--------FDKIAKDPKIDAVYI  106 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS--------GGGGGGCTTCCEEEE
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc--------hhhhcccccceeeee
Confidence            678889999986 3344333 336633445566666654 466777532  222322        2343334 7999999


Q ss_pred             ecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          221 CTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       221 ~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ++....+.+.+.+++..  |+-+.+..
T Consensus       107 ~tp~~~H~~~~~~al~~--gk~v~~EK  131 (221)
T d1h6da1         107 ILPNSLHAEFAIRAFKA--GKHVMCEK  131 (221)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECS
T ss_pred             ccchhhhhhHHHHhhhc--chhhhcCC
Confidence            99877778888888875  66666754

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.86  E-value=0.76  Score=38.03  Aligned_cols=31  Identities=19%  Similarity=0.155  Sum_probs=26.4

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL  177 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~  177 (329)
                      +.|||+|+ |-+|...+..+...|. .|++++.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEEC
Confidence            57899987 9999999998888898 7888754

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.82  E-value=0.31  Score=33.54  Aligned_cols=34  Identities=26%  Similarity=0.347  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .++++|.|+|.+|+-+++.++.+|. +|..+...+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            3789999999999999999999999 788886543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=88.81  E-value=0.23  Score=41.11  Aligned_cols=34  Identities=18%  Similarity=0.268  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .++|+|+|||..|+.++..+...|. +|..++.++
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCC
Confidence            5789999999999999999988898 899998654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.72  E-value=0.17  Score=40.91  Aligned_cols=32  Identities=25%  Similarity=0.330  Sum_probs=28.8

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .|+|.|+|+.|++++..++..|. +|+.++..+
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQT   35 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            58999999999999999999999 799998764

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=88.68  E-value=0.31  Score=36.79  Aligned_cols=35  Identities=31%  Similarity=0.606  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .|.+|.|+|.|.+|...+++++.+|. +|++.++++
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~   75 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTP   75 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccc
Confidence            58899999999999999999999999 899997654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.67  E-value=0.22  Score=36.27  Aligned_cols=33  Identities=24%  Similarity=0.346  Sum_probs=28.8

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL  177 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~  177 (329)
                      .|++|||.|+|.+|..-+..+...|+ +|.+++.
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence            48999999999999999999999999 7777743

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.59  E-value=0.23  Score=34.77  Aligned_cols=35  Identities=17%  Similarity=0.321  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS  180 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~  180 (329)
                      .++++|.|+|.+|+-.++.++.+|. +|..+.+++.
T Consensus        25 p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             CCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence            5789999999999999999999999 8988876543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.54  E-value=0.32  Score=34.07  Aligned_cols=34  Identities=15%  Similarity=0.084  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .++++|.|+|.+|+-.++.++.+|. +|..+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            3689999999999999999999999 888887653

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=88.24  E-value=0.28  Score=39.89  Aligned_cols=36  Identities=28%  Similarity=0.429  Sum_probs=30.0

Q ss_pred             CCCeEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChh
Q 047713          144 KGQSVAIFGL-G--AVGLAAAEGARVSGASRIIGVDLNPS  180 (329)
Q Consensus       144 ~g~~VlI~Ga-g--~iG~aai~la~~~G~~~vv~~~~~~~  180 (329)
                      +|+++||+|+ |  ++|.++++.+...|+ +|+.+.+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchh
Confidence            5899999986 4  799999999999999 7877766543

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=88.23  E-value=2.4  Score=31.32  Aligned_cols=91  Identities=18%  Similarity=0.162  Sum_probs=57.8

Q ss_pred             eEEEEcCCHHHHH-HHHHHHHcCCC-EEE-EEcCChhhHHH-HHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEec
Q 047713          147 SVAIFGLGAVGLA-AAEGARVSGAS-RII-GVDLNPSRFNE-AKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECT  222 (329)
Q Consensus       147 ~VlI~Gag~iG~a-ai~la~~~G~~-~vv-~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~  222 (329)
                      +|.|.|.|.+|.- -+...+..... .++ .+++++++.+. .++++...+++.      +.+.+.   ...+|+|+-++
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~------~~ell~---~~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDS------YEELLE---SGLVDAVDLTL   75 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESC------HHHHHH---SSCCSEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeee------eecccc---ccccceeeccc
Confidence            5788899999964 45555544322 455 44566666554 566776555421      433332   23699999998


Q ss_pred             CCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          223 GSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       223 g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      ....+.+.+..++..  |.-+.+..+
T Consensus        76 p~~~h~~~~~~al~~--gk~V~~EKP   99 (181)
T d1zh8a1          76 PVELNLPFIEKALRK--GVHVICEKP   99 (181)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESS
T ss_pred             ccccccccccccccc--chhhhcCCC
Confidence            776777888888875  666666543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.21  E-value=1.9  Score=36.13  Aligned_cols=32  Identities=28%  Similarity=0.265  Sum_probs=28.0

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDL  177 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~  177 (329)
                      |.+|||+|+ |-+|..++..+...|. .|+++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iDn   33 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDN   33 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEec
Confidence            678999987 9999999999999998 8999874

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.08  E-value=0.36  Score=35.56  Aligned_cols=36  Identities=25%  Similarity=0.389  Sum_probs=29.2

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCCh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGAS-RIIGVDLNP  179 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~-~vv~~~~~~  179 (329)
                      .|++|+|.|+|.+|+.+++.++..+.+ +|+.++.++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            488999999999999999988877743 677776554

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=88.07  E-value=0.63  Score=34.49  Aligned_cols=101  Identities=18%  Similarity=0.202  Sum_probs=57.4

Q ss_pred             eEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcC---ChhhHHHHHhcCCceeeCC-----CCCC----c-----hHHHHHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVS-GASRIIGVDL---NPSRFNEAKKFGVTEFVNP-----KDYD----K-----PVQQVIA  208 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~---~~~~~~~~~~lg~~~~~~~-----~~~~----~-----~~~~~~~  208 (329)
                      +|.|.|-|-+|+++...+... .. .++++--   +.+...++-++...+--..     .+..    .     .-.+...
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~-~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~   81 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKV-DIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS   81 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSS-EEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCc-EEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCChh
Confidence            578999999999999877644 45 6666632   3455555555432211000     0000    0     0000122


Q ss_pred             hhhc-C-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCC
Q 047713          209 DMTN-G-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPN  249 (329)
Q Consensus       209 ~~~~-~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~  249 (329)
                      ++.- . ++|+|+||+|.-...+.+...+..+ .+=+.+..+.
T Consensus        82 ~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~g-akkViiSaP~  123 (169)
T d1u8fo1          82 KIKWGDAGAEYVVESTGVFTTMEKAGAHLQGG-AKRVIISAPS  123 (169)
T ss_dssp             GCCTTTTTCCEEEECSSSCCSHHHHGGGGGGT-CSEEEESSCC
T ss_pred             hCCccccCCCEEEEecceeccHHHHHHHHhcC-CceEeecccc
Confidence            2222 3 7999999999766666777778776 6555555543

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=88.05  E-value=0.87  Score=36.67  Aligned_cols=97  Identities=16%  Similarity=0.172  Sum_probs=63.8

Q ss_pred             cCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhc----CCceeeCCCCCCchHHHHHHhhh-cC
Q 047713          140 AKPKKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAKKF----GVTEFVNPKDYDKPVQQVIADMT-NG  213 (329)
Q Consensus       140 ~~~~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~-~~  213 (329)
                      .++.++.+||=+|+| .|..+..+++..+. .+|++++.++...+.+++.    +...-+...+        +.++. .+
T Consensus        23 ~~~~~~~~ILDiGcG-~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d--------~~~~~~~~   93 (281)
T d2gh1a1          23 WKITKPVHIVDYGCG-YGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGD--------ATEIELND   93 (281)
T ss_dssp             SCCCSCCEEEEETCT-TTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESC--------TTTCCCSS
T ss_pred             hccCCcCEEEEecCc-CCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccc--------cccccccC
Confidence            356778899988987 48888888887542 3899999999888776643    3321111111        11111 23


Q ss_pred             CccEEEEecC------CHHHHHHHHHhhccCCeEEEEec
Q 047713          214 GVDRSVECTG------SVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       214 ~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      .+|+|+-...      ....++...+.|+++ |.++...
T Consensus        94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~  131 (281)
T d2gh1a1          94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE  131 (281)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             CceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence            7999985432      234578888999998 9988765

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=87.97  E-value=0.99  Score=35.64  Aligned_cols=103  Identities=17%  Similarity=0.095  Sum_probs=61.4

Q ss_pred             hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceeeCCCCCCchHHHHHHhhh
Q 047713          136 TVNVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTEFVNPKDYDKPVQQVIADMT  211 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~  211 (329)
                      +.....+.+..+||=+|+| .|..++.+++...-.++++++.+ +..+.+    .+.+....+.....+  +    .+..
T Consensus        72 ~~~~~d~~~~~~VLDvGcG-~G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~D--~----~~~~  143 (253)
T d1tw3a2          72 PAAAYDWTNVRHVLDVGGG-KGGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEGD--F----FEPL  143 (253)
T ss_dssp             HHHHSCCTTCSEEEEETCT-TSHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEECC--T----TSCC
T ss_pred             HHhhcCCccCCEEEEeCCC-CCHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhcccc--c----hhhc
Confidence            4455667778899988876 48888899987743388888864 333333    333432111111111  1    1112


Q ss_pred             cCCccEEEEecC-----CH---HHHHHHHHhhccCCeEEEEecc
Q 047713          212 NGGVDRSVECTG-----SV---QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       212 ~~~~d~Vid~~g-----~~---~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +.++|+|+-..-     ..   ..+..+.+.|+++ |+++....
T Consensus       144 ~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~  186 (253)
T d1tw3a2         144 PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHER  186 (253)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             ccchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEec
Confidence            236899874321     11   3467788899998 99988754

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.93  E-value=2.5  Score=34.00  Aligned_cols=99  Identities=17%  Similarity=0.124  Sum_probs=61.7

Q ss_pred             hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHhcCCceeeCCC------------------
Q 047713          138 NVAKPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL--NPSRFNEAKKFGVTEFVNPK------------------  197 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~--~~~~~~~~~~lg~~~~~~~~------------------  197 (329)
                      +...++++.+|+...+|+.|.+++..++.+|.+..+.+..  ++.+.+.++.+|+..+....                  
T Consensus        54 ~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~  133 (302)
T d1fcja_          54 KRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASD  133 (302)
T ss_dssp             HHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHTS
T ss_pred             HcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHhhh
Confidence            4445667777665567999999999999999864433333  55677788888875442110                  


Q ss_pred             ----------CCCc-------hHHHHHHhhhcCCccEEEEecCCHHHHHHHHHhhc
Q 047713          198 ----------DYDK-------PVQQVIADMTNGGVDRSVECTGSVQAMISAFECVH  236 (329)
Q Consensus       198 ----------~~~~-------~~~~~~~~~~~~~~d~Vid~~g~~~~~~~~~~~l~  236 (329)
                                +...       ....++.+..++.+|.|+-++|+...+.-....++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk  189 (302)
T d1fcja_         134 PQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK  189 (302)
T ss_dssp             TTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred             ccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeee
Confidence                      0000       12233444444478999999997666554444443

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.89  E-value=0.45  Score=34.73  Aligned_cols=35  Identities=26%  Similarity=0.295  Sum_probs=29.7

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      -+++|+|+|+|.+|.-++..|...|++.|..+.+.
T Consensus        44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence            36789999999999999999999999878777553

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.80  E-value=1.9  Score=35.33  Aligned_cols=109  Identities=21%  Similarity=0.124  Sum_probs=66.5

Q ss_pred             hccCCCCCCeEEEE-cCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHhcCCceeeCCC-----------------
Q 047713          138 NVAKPKKGQSVAIF-GLGAVGLAAAEGARVSGASRIIGVDL--NPSRFNEAKKFGVTEFVNPK-----------------  197 (329)
Q Consensus       138 ~~~~~~~g~~VlI~-Gag~iG~aai~la~~~G~~~vv~~~~--~~~~~~~~~~lg~~~~~~~~-----------------  197 (329)
                      +...++++...+|. .+|+.|++.+..++.+|.+.++.+..  ++.+.+.++.+|++.+....                 
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~  136 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAK  136 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHh
Confidence            44555666666666 45999999999999999853333322  56788889999986443111                 


Q ss_pred             ----------CCCc-------hHHHHHHhhhcCCccEEEEecCCHHHHHH---HHHhhccCCeEEEEecc
Q 047713          198 ----------DYDK-------PVQQVIADMTNGGVDRSVECTGSVQAMIS---AFECVHDGWGVAVLVGV  247 (329)
Q Consensus       198 ----------~~~~-------~~~~~~~~~~~~~~d~Vid~~g~~~~~~~---~~~~l~~~~G~vv~~g~  247 (329)
                                +++.       ....++.+-..+.+|.|+-++|+...+.-   .++...+. -+++.+..
T Consensus       137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~-~~~igve~  205 (320)
T d1z7wa1         137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNAN-VKLYGVEP  205 (320)
T ss_dssp             CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred             CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcc-eeeecccc
Confidence                      1110       02223333333468999999997666543   33444555 66666643

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=87.65  E-value=2.7  Score=31.31  Aligned_cols=105  Identities=20%  Similarity=0.271  Sum_probs=62.2

Q ss_pred             hccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCcc
Q 047713          138 NVAKPKKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVD  216 (329)
Q Consensus       138 ~~~~~~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d  216 (329)
                      +...+++|.++ |-+. |.=|+ +..+++. +. +|++++.+++....++++-...+-.....-.++...+.....+.+|
T Consensus        12 ~~l~~~~g~~~-vD~T~G~GGh-s~~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vd   87 (182)
T d1wg8a2          12 DLLAVRPGGVY-VDATLGGAGH-ARGILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVD   87 (182)
T ss_dssp             HHHTCCTTCEE-EETTCTTSHH-HHHHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEE
T ss_pred             HhcCCCCCCEE-EEeCCCCcHH-HHHHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccC
Confidence            34567788764 4443 44344 3444554 44 8999999999988888753322211111112255555554444799


Q ss_pred             EEEEecCCHH---------------HHHHHHHhhccCCeEEEEecc
Q 047713          217 RSVECTGSVQ---------------AMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       217 ~Vid~~g~~~---------------~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .|+=-.|..+               .++...+.++++ |+++.+..
T Consensus        88 gIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~g-g~~~ii~f  132 (182)
T d1wg8a2          88 GILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPG-GRLVVIAF  132 (182)
T ss_dssp             EEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             EEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCC-CeEEEEec
Confidence            8764445322               366777788887 88877754

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=87.62  E-value=3.5  Score=29.27  Aligned_cols=77  Identities=17%  Similarity=0.073  Sum_probs=49.6

Q ss_pred             CeEEEEc-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC--CccEEEEec
Q 047713          146 QSVAIFG-LGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG--GVDRSVECT  222 (329)
Q Consensus       146 ~~VlI~G-ag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~d~Vid~~  222 (329)
                      ++|.|+| .|.+|...+..++..|. .|.+.+.+++........+++.++..... ......+.+..+.  .=.+++|+.
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~v~~~~~~~~~~~~iiiD~~   87 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVPI-NLTLETIERLKPYLTENMLLADLT   87 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSCG-GGHHHHHHHHGGGCCTTSEEEECC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccch-hhheeeeecccccccCCceEEEec
Confidence            5899999 69999999999999999 78888887766555444455554433221 1233444444332  224677776


Q ss_pred             CC
Q 047713          223 GS  224 (329)
Q Consensus       223 g~  224 (329)
                      ..
T Consensus        88 Sv   89 (152)
T d2pv7a2          88 SV   89 (152)
T ss_dssp             SC
T ss_pred             cc
Confidence            53

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.37  E-value=0.58  Score=35.25  Aligned_cols=37  Identities=30%  Similarity=0.445  Sum_probs=32.7

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSR  181 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~  181 (329)
                      .|.++.|.|.|.+|..++++++.+|. +|++.++...+
T Consensus        43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~   79 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSP   79 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCH
T ss_pred             cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCCh
Confidence            58899999999999999999999999 89999865443

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.36  E-value=0.27  Score=38.13  Aligned_cols=31  Identities=19%  Similarity=0.345  Sum_probs=27.7

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      |+|+|+|..|+.++..+...|. +|.+++..+
T Consensus         8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            7888999999999999988998 899998864

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=87.22  E-value=1.4  Score=32.56  Aligned_cols=42  Identities=24%  Similarity=0.275  Sum_probs=36.0

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGV  190 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~  190 (329)
                      |-|+|.|.+|...+.-+...|. .|.+.++++++.+.+.+.+.
T Consensus         4 IGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           4 VGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            6788999999999998888898 79999999999987766554

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=87.21  E-value=0.78  Score=36.20  Aligned_cols=97  Identities=22%  Similarity=0.178  Sum_probs=57.8

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhh-hcCCcc
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADM-TNGGVD  216 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~-~~~~~d  216 (329)
                      ++++++||=.|+|. |..+..+++. |.+.|++++.+++..+.+++    ++...-+.....+  ..  .... ..+.+|
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D--~~--~~~~~~~~~fD   95 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQD--SY--GRHMDLGKEFD   95 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESC--TT--TSCCCCSSCEE
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcc--hh--hhcccccccce
Confidence            46899999998864 6666777775 44489999999998887754    3322111000000  00  0011 123799


Q ss_pred             EEEEecCC------H----HHHHHHHHhhccCCeEEEEe
Q 047713          217 RSVECTGS------V----QAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       217 ~Vid~~g~------~----~~~~~~~~~l~~~~G~vv~~  245 (329)
                      +|+-....      .    ..+..+.+.|+++ |.++..
T Consensus        96 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g-G~~i~~  133 (252)
T d1ri5a_          96 VISSQFSFHYAFSTSESLDIAQRNIARHLRPG-GYFIMT  133 (252)
T ss_dssp             EEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             EEEEcceeeecCCCHHHHHHHHHHHhceeCCC-CEEEEE
Confidence            99754322      1    2445566789998 988764

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=87.21  E-value=1.1  Score=33.09  Aligned_cols=102  Identities=25%  Similarity=0.270  Sum_probs=55.8

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCC--hhhHHHHHhcCCcee-----eCCCCCC-----c----hHHHHHHh
Q 047713          147 SVAIFGLGAVGLAAAEGARVSG-ASRIIGVDLN--PSRFNEAKKFGVTEF-----VNPKDYD-----K----PVQQVIAD  209 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G-~~~vv~~~~~--~~~~~~~~~lg~~~~-----~~~~~~~-----~----~~~~~~~~  209 (329)
                      +|.|.|-|-+|.++...+.... . .++++.-.  .+...++-++...+.     +...+..     .    .-.+...+
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i-~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~   81 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDI-EIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN   81 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCe-EEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence            4778899999999999877553 4 56666432  233334433322110     0000000     0    00001112


Q ss_pred             hhc-C-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccCCC
Q 047713          210 MTN-G-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNK  250 (329)
Q Consensus       210 ~~~-~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~~~  250 (329)
                      +.. . ++|+|+||+|.-...+.+...+..+ .+=|.+..+..
T Consensus        82 i~W~~~gvDiViEcTG~f~t~~~~~~hl~~g-akkViiSaP~~  123 (166)
T d1gado1          82 LKWDEVGVDVVAEATGLFLTDETARKHITAG-AKKVVMTGPSK  123 (166)
T ss_dssp             GCHHHHTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCCS
T ss_pred             CCccccCCCEEEEccccccCHHHHHHHhcCC-CceEEeecccc
Confidence            211 2 7999999999766667777788776 65555554433

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=87.10  E-value=2.3  Score=31.27  Aligned_cols=100  Identities=17%  Similarity=0.203  Sum_probs=55.0

Q ss_pred             eEEEEcCCHHHHHHHHHHHHc---CCCEEEEEcC--ChhhHHHHHhcCCceee-----CCCCCC----c-----hHHHHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVS---GASRIIGVDL--NPSRFNEAKKFGVTEFV-----NPKDYD----K-----PVQQVI  207 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~---G~~~vv~~~~--~~~~~~~~~~lg~~~~~-----~~~~~~----~-----~~~~~~  207 (329)
                      +|.|.|-|-+|..+...+...   .. .|+++--  +.+...++-++-..+-.     ...+..    .     .-.+..
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            688999999999999877642   35 6666633  33444555444321110     000000    0     000011


Q ss_pred             Hhhhc-C-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          208 ADMTN-G-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       208 ~~~~~-~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      .++.. . ++|+|+||+|.-...+.+...+..+ .+=|.+..+
T Consensus        81 ~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP  122 (169)
T d1hdgo1          81 SKLPWKDLGVDFVIESTGVFRNREKAELHLQAG-AKKVIITAP  122 (169)
T ss_dssp             GGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSC
T ss_pred             hhCCccccCCCEEEEecceeccccchhhhccCC-CceEEEecc
Confidence            12111 2 7999999999766667777788775 544445443

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=86.98  E-value=0.31  Score=38.97  Aligned_cols=33  Identities=30%  Similarity=0.456  Sum_probs=29.7

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEc
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVD  176 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~  176 (329)
                      -.|.+|+|.|.|.+|..+++.+...|+ +|++++
T Consensus        34 l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs   66 (255)
T d1bgva1          34 LVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS   66 (255)
T ss_dssp             STTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence            368999999999999999999999999 787774

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=86.70  E-value=1.3  Score=35.40  Aligned_cols=33  Identities=18%  Similarity=0.105  Sum_probs=27.6

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .+|||+|+ |-+|..++..+...|. .|+++++++
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~   37 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPE   37 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC
Confidence            56999987 9999999998888898 787777643

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=86.70  E-value=0.48  Score=35.01  Aligned_cols=82  Identities=12%  Similarity=0.219  Sum_probs=56.5

Q ss_pred             hhccCC-CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCC
Q 047713          137 VNVAKP-KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGG  214 (329)
Q Consensus       137 ~~~~~~-~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  214 (329)
                      +++.++ -.|++|+|.|- ..+|.-+..++...|+ .|..+.+....                     ....+++     
T Consensus        28 L~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t~~---------------------l~~~~~~-----   80 (166)
T d1b0aa1          28 LERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFTKN---------------------LRHHVEN-----   80 (166)
T ss_dssp             HHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSCSC---------------------HHHHHHH-----
T ss_pred             HHHcCcccccceEEEEeccccccHHHHHHHHHhhc-cccccccccch---------------------hHHHHhh-----
Confidence            343333 46999999985 7899999999999999 78777533221                     2223332     


Q ss_pred             ccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          215 VDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       215 ~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +|+|+-++|.+..+..  +.++++ ..++.+|..
T Consensus        81 ADivI~a~G~p~~i~~--~~vk~g-~vvIDvGi~  111 (166)
T d1b0aa1          81 ADLLIVAVGKPGFIPG--DWIKEG-AIVIDVGIN  111 (166)
T ss_dssp             CSEEEECSCCTTCBCT--TTSCTT-CEEEECCCE
T ss_pred             hhHhhhhccCcccccc--cccCCC-cEEEecCce
Confidence            6999999997655442  346776 788888753

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.55  E-value=0.29  Score=37.67  Aligned_cols=30  Identities=30%  Similarity=0.313  Sum_probs=26.4

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      |+|+|+|+.|+.++..|...|. +|+.++..
T Consensus         6 vvVIGgGpaGl~aA~~aa~~G~-kV~vie~~   35 (221)
T d1dxla1           6 VVIIGGGPGGYVAAIKAAQLGF-KTTCIEKR   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence            6788999999999999999999 78888754

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=86.45  E-value=0.2  Score=42.32  Aligned_cols=31  Identities=19%  Similarity=0.290  Sum_probs=25.8

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDL  177 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~  177 (329)
                      +|||+|+ |-+|..++..+...|.++|++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            5899986 999999999888888866777764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=86.38  E-value=0.34  Score=36.09  Aligned_cols=30  Identities=33%  Similarity=0.254  Sum_probs=26.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDL  177 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~  177 (329)
                      -|+|+|+|+.|+.|+..|...|. +|+.++.
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~   32 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGE   32 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence            37888999999999999999999 6888864

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=86.32  E-value=0.32  Score=38.58  Aligned_cols=33  Identities=27%  Similarity=0.286  Sum_probs=28.4

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPS  180 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~  180 (329)
                      -|+|+|+|+.|++++..|...|. +|+.++..++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            37888999999999998888998 8999987654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.08  E-value=0.33  Score=38.14  Aligned_cols=31  Identities=39%  Similarity=0.519  Sum_probs=27.0

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      |+|+|+|+.|+.++..+...|. +|+.++..+
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGN   35 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            7888999999998888888899 899998654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.02  E-value=0.57  Score=32.54  Aligned_cols=35  Identities=20%  Similarity=0.256  Sum_probs=30.0

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .+++++|.|+|.+|+-+++.+...|. +|..+...+
T Consensus        31 ~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          31 NSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             cCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            35789999999999999999999998 788887653

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.93  E-value=0.33  Score=37.64  Aligned_cols=98  Identities=17%  Similarity=0.203  Sum_probs=57.3

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCceeeCCCCCCchHHHHHHhhh---c-C
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGA-SRIIGVDLNPSRFNEAK----KFGVTEFVNPKDYDKPVQQVIADMT---N-G  213 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~---~-~  213 (329)
                      .+.++||-+|.+ .|..++.+|+.+.. .+|++++.+++..+.++    ..|...-+.....+  ..+.+.++.   . +
T Consensus        55 ~kpk~ILEiGt~-~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd--~~e~l~~l~~~~~~~  131 (214)
T d2cl5a1          55 YSPSLVLELGAY-CGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGA--SQDLIPQLKKKYDVD  131 (214)
T ss_dssp             HCCSEEEEECCT-TSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHGGGHHHHSCCC
T ss_pred             hCCCEEEEEccC-chhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeecc--ccccccchhhccccc
Confidence            345789998874 36777888886532 39999999998777654    45654333333333  444444432   2 2


Q ss_pred             CccEEEEecCCHH-----HHHHHHHhhccCCeEEEEe
Q 047713          214 GVDRSVECTGSVQ-----AMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       214 ~~d~Vid~~g~~~-----~~~~~~~~l~~~~G~vv~~  245 (329)
                      .+|+||--.....     .+...+++|+++ |. +.+
T Consensus       132 ~~D~ifiD~~~~~~~~~~~l~~~~~lLkpG-Gv-Iv~  166 (214)
T d2cl5a1         132 TLDMVFLDHWKDRYLPDTLLLEKCGLLRKG-TV-LLA  166 (214)
T ss_dssp             CEEEEEECSCGGGHHHHHHHHHHTTCEEEE-EE-EEE
T ss_pred             ccceeeecccccccccHHHHHHHhCccCCC-cE-EEE
Confidence            6998863322211     133445568886 64 444

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.74  E-value=0.7  Score=35.25  Aligned_cols=40  Identities=33%  Similarity=0.623  Sum_probs=35.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK  187 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~  187 (329)
                      +|.|+|.|-+|+..+..+...|. .|++.+.++++.+.+++
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcc
Confidence            47788999999999888888898 89999999998888765

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=85.61  E-value=1.1  Score=36.79  Aligned_cols=73  Identities=12%  Similarity=0.081  Sum_probs=42.8

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCceee-CCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKF-GVTEFV-NPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~l-g~~~~~-~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +|||+|+ |-+|..+++.+...|..+|++++....+...+.+. ....+. |..+.. ++.+...    .++|+||.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~-~~~~~~~----~~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHS-EWIEYHV----KKCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCS-HHHHHHH----HHCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChH-HHHHHHH----hCCCccccccc
Confidence            5899987 99999999888777743788887655443332221 111111 222221 2222221    25899999876


Q ss_pred             C
Q 047713          224 S  224 (329)
Q Consensus       224 ~  224 (329)
                      .
T Consensus        77 ~   77 (342)
T d2blla1          77 I   77 (342)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=85.55  E-value=0.28  Score=39.32  Aligned_cols=31  Identities=32%  Similarity=0.450  Sum_probs=27.5

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      +|+|+|+|..|+.++..+...|. +|+.++.+
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESS   32 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecC
Confidence            48899999999999999999999 78888764

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.37  E-value=1.8  Score=34.77  Aligned_cols=101  Identities=17%  Similarity=0.294  Sum_probs=58.8

Q ss_pred             ccCCCCCCeEEEEc-C-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceeeCCCCCCchHHHHHHhhhc
Q 047713          139 VAKPKKGQSVAIFG-L-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEA----KKFGVTEFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       139 ~~~~~~g~~VlI~G-a-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      ....++|++||=.. + |+-..   ++|..+.-..+++++.++.|...+    +.+|...+....+.. ...   .....
T Consensus        97 ~L~~~~g~~vLD~CAaPGgKt~---~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~-~~~---~~~~~  169 (284)
T d1sqga2          97 WLAPQNGEHILDLCAAPGGKTT---HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR-YPS---QWCGE  169 (284)
T ss_dssp             HHCCCTTCEEEEESCTTCHHHH---HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTT-CTH---HHHTT
T ss_pred             ccCccccceeEeccCccccchh---hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeecccc-ccc---hhccc
Confidence            34678999999873 3 54444   334333324899999999987655    557775333222111 011   11122


Q ss_pred             CCccEEE-E--ecCCH-------------------------HHHHHHHHhhccCCeEEEEecc
Q 047713          213 GGVDRSV-E--CTGSV-------------------------QAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       213 ~~~d~Vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +.||.|+ |  |+|.+                         ..+..++++++++ |++|....
T Consensus       170 ~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~g-G~lvYsTC  231 (284)
T d1sqga2         170 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYATC  231 (284)
T ss_dssp             CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEEES
T ss_pred             ccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCC-ceEEEeee
Confidence            3799886 4  55532                         2456666778886 77776654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=85.19  E-value=0.83  Score=36.40  Aligned_cols=33  Identities=15%  Similarity=0.196  Sum_probs=28.4

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .+|||+|+ |-+|..++..+...|. .|++++++.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~   37 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGH-PTFLLVRES   37 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCC
Confidence            67999987 9999999999988898 788887754

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=85.19  E-value=1.5  Score=36.09  Aligned_cols=103  Identities=13%  Similarity=0.144  Sum_probs=64.0

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHhcCCceeeCCCCCCc-------------------
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL--NPSRFNEAKKFGVTEFVNPKDYDK-------------------  201 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~--~~~~~~~~~~lg~~~~~~~~~~~~-------------------  201 (329)
                      .+..+|+...+|+.|.+++..++..|.+.++.+..  ++++.+.++.+|++.+....+.+.                   
T Consensus        73 ~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (331)
T d1tdja1          73 QKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPP  152 (331)
T ss_dssp             SCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHHHHHCCEECCS
T ss_pred             CCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhhhhcCCCccccc
Confidence            34555666567999999999999999854444433  556788899999876543222110                   


Q ss_pred             -----------hHHHHHHhhhcCCccEEEEecCCHHHHH---HHHHhhccCCeEEEEecc
Q 047713          202 -----------PVQQVIADMTNGGVDRSVECTGSVQAMI---SAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       202 -----------~~~~~~~~~~~~~~d~Vid~~g~~~~~~---~~~~~l~~~~G~vv~~g~  247 (329)
                                 ....++.+- .+.+|.||-++|+...+.   ..++.+.+. -+++.+..
T Consensus       153 ~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~-~~ii~ve~  210 (331)
T d1tdja1         153 FDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQ-IKVIAVEA  210 (331)
T ss_dssp             SCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred             cCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCC-cEEEEecc
Confidence                       011111111 136899999998765543   444445565 67777754

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.95  E-value=1.6  Score=34.77  Aligned_cols=104  Identities=11%  Similarity=-0.043  Sum_probs=56.6

Q ss_pred             CCCCCeEEEEcCCHHHHHHHHHHHH----c-CCC-EEEEEcCChhhHHHHHhcCCc------eeeCCCCCC-chHHHHHH
Q 047713          142 PKKGQSVAIFGLGAVGLAAAEGARV----S-GAS-RIIGVDLNPSRFNEAKKFGVT------EFVNPKDYD-KPVQQVIA  208 (329)
Q Consensus       142 ~~~g~~VlI~Gag~iG~aai~la~~----~-G~~-~vv~~~~~~~~~~~~~~lg~~------~~~~~~~~~-~~~~~~~~  208 (329)
                      .++.-+||=+|+|. |..+..+++.    . +.. .+++++.++...+.+++.-..      ..++....+ ..+.....
T Consensus        38 ~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (280)
T d1jqea_          38 TKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRML  116 (280)
T ss_dssp             TCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHT
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhc
Confidence            34445788888643 4444444442    2 221 678999999888777653110      011111111 01111222


Q ss_pred             hh-hcCCccEEEEecC------CHHHHHHHHHhhccCCeEEEEecc
Q 047713          209 DM-TNGGVDRSVECTG------SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       209 ~~-~~~~~d~Vid~~g------~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .. ..+.+|+|+-...      ....+....++|+++ |.++....
T Consensus       117 ~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~  161 (280)
T d1jqea_         117 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV  161 (280)
T ss_dssp             TSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             ccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence            22 2338999974322      235688888999998 98777644

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=84.89  E-value=0.21  Score=37.73  Aligned_cols=34  Identities=24%  Similarity=0.203  Sum_probs=28.7

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      ++..|+|+|+|+.|+.++..|...|. +|+.++..
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGM   37 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEee
Confidence            35679999999999999999999999 77777643

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=84.81  E-value=1.1  Score=31.40  Aligned_cols=62  Identities=19%  Similarity=0.175  Sum_probs=47.7

Q ss_pred             hhhccCCCCCCeEEEE-cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCC
Q 047713          136 TVNVAKPKKGQSVAIF-GLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPK  197 (329)
Q Consensus       136 l~~~~~~~~g~~VlI~-Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  197 (329)
                      ++..+++..-+.+++. ..-..-+.++++++.++.+++++...+++..+.++++|++.++++.
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~  119 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE  119 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence            4556677776766664 4445567788899999988888888888888999999999888653

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.76  E-value=0.73  Score=30.77  Aligned_cols=25  Identities=36%  Similarity=0.489  Sum_probs=19.8

Q ss_pred             cceEEEEEecCCCC----------cCCCCCEEeec
Q 047713           20 EAGGIVESVGEGVT----------DLQPGDHVLPV   44 (329)
Q Consensus        20 e~~G~V~~vG~~v~----------~~~~Gd~V~~~   44 (329)
                      ...|+|+++|++..          .+++||+|+..
T Consensus        37 ~~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~   71 (99)
T d1p3ha_          37 PQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYS   71 (99)
T ss_dssp             EEEEEEEEECCCEECSSSSCEECCSCCTTCEEEEE
T ss_pred             ceEEEEEEECCceEcCCCCEecCCeeecCCEEEEc
Confidence            34699999999752          37899999865

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.74  E-value=1  Score=33.67  Aligned_cols=95  Identities=16%  Similarity=0.194  Sum_probs=55.1

Q ss_pred             CCCCCeEEEE--cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhc-C-
Q 047713          142 PKKGQSVAIF--GLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTN-G-  213 (329)
Q Consensus       142 ~~~g~~VlI~--Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~-~-  213 (329)
                      ..+|.+||=.  |+|.+|+.++    ..|++.|+.++.+.+..+.+++    ++...-+.....+  ..+.++.+.. + 
T Consensus        39 ~~~~~~vLDlfaGsG~~g~ea~----srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D--~~~~l~~~~~~~~  112 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIEAV----SRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMD--ANRALEQFYEEKL  112 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHHHHHHHTTC
T ss_pred             hcCCCEEEEcccccccccceee----ecchhHHHHHHHHHHHHHHHHHHhhhhhccccccccccc--chhhhhhhcccCC
Confidence            3468888776  4577777433    3788899999999988877654    4443211111222  5566665432 3 


Q ss_pred             CccEEE-Ee---cC-CHHHHHHHHH--hhccCCeEEE
Q 047713          214 GVDRSV-EC---TG-SVQAMISAFE--CVHDGWGVAV  243 (329)
Q Consensus       214 ~~d~Vi-d~---~g-~~~~~~~~~~--~l~~~~G~vv  243 (329)
                      .+|+|| |+   .. ....++...+  +|+++ |.++
T Consensus       113 ~fDlIflDPPY~~~~~~~~l~~i~~~~~L~~~-giIi  148 (182)
T d2fhpa1         113 QFDLVLLDPPYAKQEIVSQLEKMLERQLLTNE-AVIV  148 (182)
T ss_dssp             CEEEEEECCCGGGCCHHHHHHHHHHTTCEEEE-EEEE
T ss_pred             CcceEEechhhhhhHHHHHHHHHHHCCCCCCC-EEEE
Confidence            899987 42   11 1233444433  46765 6554

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=84.58  E-value=0.41  Score=36.76  Aligned_cols=30  Identities=20%  Similarity=0.297  Sum_probs=26.5

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      |+|+|+|+.|+.++..|..+|. +|..++..
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            6788999999999999999999 78888754

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.36  E-value=0.69  Score=38.56  Aligned_cols=34  Identities=21%  Similarity=0.321  Sum_probs=28.9

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      .+-+|||+|+ |-+|..++..+...|. .|++++..
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~   48 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWK   48 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCC
Confidence            3568999986 9999999999999998 88888653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.99  E-value=1  Score=33.26  Aligned_cols=83  Identities=14%  Similarity=0.206  Sum_probs=57.1

Q ss_pred             hhhccCC-CCCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC
Q 047713          136 TVNVAKP-KKGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG  213 (329)
Q Consensus       136 l~~~~~~-~~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  213 (329)
                      ++++.++ -.|++|+|.|. ..+|.-+..++...|+ .|..+.......                     .+..+     
T Consensus        29 lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~~l---------------------~~~~~-----   81 (170)
T d1a4ia1          29 LIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTAHL---------------------DEEVN-----   81 (170)
T ss_dssp             HHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCSSH---------------------HHHHT-----
T ss_pred             HHHHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEecccccH---------------------HHHHh-----
Confidence            3444444 37999999985 8899999999999999 888876433222                     11111     


Q ss_pred             CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          214 GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       214 ~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      ..|+++-++|.+..+..  +.++++ -.++.+|..
T Consensus        82 ~aDivi~a~G~~~~i~~--~~vk~g-~iviDvgi~  113 (170)
T d1a4ia1          82 KGDILVVATGQPEMVKG--EWIKPG-AIVIDCGIN  113 (170)
T ss_dssp             TCSEEEECCCCTTCBCG--GGSCTT-CEEEECCCB
T ss_pred             hccchhhcccccccccc--ccccCC-CeEeccCcc
Confidence            37899999987655442  357776 788888753

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=83.89  E-value=2  Score=35.32  Aligned_cols=37  Identities=16%  Similarity=0.214  Sum_probs=30.4

Q ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 047713          144 KGQSVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSR  181 (329)
Q Consensus       144 ~g~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~  181 (329)
                      +-++|+|+|+ |.+|..++..+...|. .|+++.++..+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~   39 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKG   39 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcch
Confidence            4578999987 9999999999988999 67777775543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=83.31  E-value=3.6  Score=28.33  Aligned_cols=72  Identities=14%  Similarity=0.097  Sum_probs=48.9

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCCH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSV  225 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~~  225 (329)
                      .++|.|.|.+|+.++..++  +. .+++++.++++.+.++..|...+.-  +..  -.+.+++..-..++.++-+....
T Consensus         2 HivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~G--d~~--~~~~L~~a~i~~A~~vi~~~~~d   73 (129)
T d2fy8a1           2 HVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVHG--DPT--RVSDLEKANVRGARAVIVNLESD   73 (129)
T ss_dssp             CEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEES--CTT--SHHHHHHTTCTTCSEEEECCSSH
T ss_pred             EEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCcccccc--ccC--CHHHHHHhhhhcCcEEEEeccch
Confidence            5788899999998888764  43 4667788888888888888755432  111  22445554444788888777543

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.31  E-value=0.56  Score=35.92  Aligned_cols=30  Identities=27%  Similarity=0.318  Sum_probs=26.1

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      |+|+|+|+.|+.++..|...|. +|+.++..
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            6778999999999999999999 78888654

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.14  E-value=0.44  Score=38.87  Aligned_cols=32  Identities=16%  Similarity=0.286  Sum_probs=27.6

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      -|+|+|||..|+.++..+...|. +|..++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            37889999999999999988898 899987654

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=83.00  E-value=0.52  Score=36.27  Aligned_cols=31  Identities=29%  Similarity=0.259  Sum_probs=27.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      -|+|+|+|+.|+.++..|..+|. +|..++..
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            37788999999999999999999 78888754

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.00  E-value=0.53  Score=38.45  Aligned_cols=32  Identities=25%  Similarity=0.273  Sum_probs=28.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      .|+|+|||..|++++..++..|. .|++.+..+
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGR-SVHVIETAG   40 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCC-CEEEEEcCC
Confidence            57888999999999999999999 788887654

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.99  E-value=0.55  Score=36.24  Aligned_cols=30  Identities=33%  Similarity=0.325  Sum_probs=25.8

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      |+|+|+|+.|+.|+..|...|. +|+.++..
T Consensus         8 viVIG~GpAGl~aA~~aa~~G~-kV~lie~~   37 (233)
T d1v59a1           8 VVIIGGGPAGYVAAIKAAQLGF-NTACVEKR   37 (233)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence            6788999999999988888999 78888754

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=82.74  E-value=1.4  Score=30.07  Aligned_cols=63  Identities=10%  Similarity=0.122  Sum_probs=39.8

Q ss_pred             CCeEEEEcCCHHHHHHHHHHHHcCCC--EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEe
Q 047713          145 GQSVAIFGLGAVGLAAAEGARVSGAS--RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVEC  221 (329)
Q Consensus       145 g~~VlI~Gag~iG~aai~la~~~G~~--~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~  221 (329)
                      +++++|.|+|.+|.-++..++.++.+  .|..+.+.+.            +.  +..+.+..+.+++.... |+++.+++
T Consensus        20 p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~~------------iL--~~~d~~~~~~l~~~l~~~GV~v~~~~   85 (117)
T d1aoga2          20 PRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEM------------IL--RGFDHTLREELTKQLTANGIQILTKE   85 (117)
T ss_dssp             CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSS------------SS--TTSCHHHHHHHHHHHHHTTCEEEESC
T ss_pred             CCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccch------------hh--cccchHHHHHHHHHHHhcCcEEEcCC
Confidence            57999999999999988877766542  5777755321            11  11222355555554444 77777765

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=82.57  E-value=1.3  Score=32.19  Aligned_cols=40  Identities=15%  Similarity=0.191  Sum_probs=31.9

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRF  182 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~  182 (329)
                      ++-.+|.|+|+|.+|..++.++...+...++.++.++++.
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            4567899999999999888877777766888888776543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.37  E-value=1.4  Score=33.37  Aligned_cols=68  Identities=13%  Similarity=0.193  Sum_probs=40.4

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGAS-RIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~-~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      ++|||+|+ |-+|..++..+...|.. +|++..+++.        ....-+.....+  +.+. .+...+..|.|+.++|
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~--------~~~~~~~~~~~d--~~~~-~~~~~~~~d~vi~~~g   71 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL--------AEHPRLDNPVGP--LAEL-LPQLDGSIDTAFCCLG   71 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCC--------CCCTTEECCBSC--HHHH-GGGCCSCCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCch--------hhcccccccccc--hhhh-hhccccchheeeeeee
Confidence            68999987 99999999988777752 5665554321        111111111112  4333 2223336899999987


Q ss_pred             C
Q 047713          224 S  224 (329)
Q Consensus       224 ~  224 (329)
                      .
T Consensus        72 ~   72 (212)
T d2a35a1          72 T   72 (212)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=82.31  E-value=0.3  Score=36.30  Aligned_cols=82  Identities=18%  Similarity=0.201  Sum_probs=50.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHHc-CCCEEEEE-cCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecCC
Q 047713          147 SVAIFGLGAVGLAAAEGARVS-GASRIIGV-DLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGS  224 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~-G~~~vv~~-~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g~  224 (329)
                      +|.|+|.|.+|...+..++.. +. .++++ ++++++.      .........+        .... ...+|+|+.+++.
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~-elvav~~~~~~~~------~~~~~~~~~~--------~~~~-~~~~D~Vvi~tp~   68 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDM-DLVGIFSRRATLD------TKTPVFDVAD--------VDKH-ADDVDVLFLCMGS   68 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSE-EEEEEEESSSCCS------SSSCEEEGGG--------GGGT-TTTCSEEEECSCT
T ss_pred             eEEEECChHHHHHHHHHHHhCCCc-EEEEEEecccccc------cccccccchh--------hhhh-ccccceEEEeCCC
Confidence            578999999998877777654 55 44444 3333221      1111111111        1111 1368999999988


Q ss_pred             HHHHHHHHHhhccCCeEEEEe
Q 047713          225 VQAMISAFECVHDGWGVAVLV  245 (329)
Q Consensus       225 ~~~~~~~~~~l~~~~G~vv~~  245 (329)
                      ..+.+.+.++|..+ -+++..
T Consensus        69 ~~h~~~a~~aL~aG-~~vv~~   88 (170)
T d1f06a1          69 ATDIPEQAPKFAQF-ACTVDT   88 (170)
T ss_dssp             TTHHHHHHHHHTTT-SEEECC
T ss_pred             cccHHHHHHHHHCC-CcEEEe
Confidence            77888999999985 566543

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=82.26  E-value=5.7  Score=28.89  Aligned_cols=100  Identities=17%  Similarity=0.187  Sum_probs=56.2

Q ss_pred             eEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcC---ChhhHHHHHhcCCceeeCC-----CCC-------Cch--HHHHHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVS-GASRIIGVDL---NPSRFNEAKKFGVTEFVNP-----KDY-------DKP--VQQVIA  208 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~---~~~~~~~~~~lg~~~~~~~-----~~~-------~~~--~~~~~~  208 (329)
                      +|.|.|-|-+|.++...+... .. .++++--   +.+...++-++...+--..     .+.       .-.  -.+...
T Consensus         2 kigINGfGRIGR~v~R~~~~~~~~-~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~   80 (166)
T d2b4ro1           2 KLGINGFGRIGRLVFRAAFGRKDI-EVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS   80 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred             eEEEECCCHHHHHHHHHHhhCCCc-EEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence            578899999999999987644 45 5666632   3455566655433211000     000       000  000011


Q ss_pred             hhhc-C-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          209 DMTN-G-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       209 ~~~~-~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      ++.. . ++|+|+||+|.-...+.+...|..+ .+-|.+..+
T Consensus        81 ~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP  121 (166)
T d2b4ro1          81 QIPWGKCQVDVVCESTGVFLTKELASSHLKGG-AKKVIMSAP  121 (166)
T ss_dssp             GCCHHHHTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSC
T ss_pred             HccccccCCCEEEEecccccchhhhhhhhccC-CCEEEEecc
Confidence            1111 2 7999999999766667777778776 655555443

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=82.26  E-value=0.63  Score=36.92  Aligned_cols=32  Identities=16%  Similarity=0.104  Sum_probs=27.5

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      -|+|+|+|.+|+.++..+...|. +|++++..+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            38889999999999998888898 899998643

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=82.25  E-value=0.65  Score=35.94  Aligned_cols=31  Identities=29%  Similarity=0.328  Sum_probs=26.9

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      |+|+|+|+.|+.++..|...|. +|+.++..+
T Consensus         9 viIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            6788999999999999999999 788887543

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=82.24  E-value=3.2  Score=29.66  Aligned_cols=70  Identities=16%  Similarity=0.098  Sum_probs=42.4

Q ss_pred             CCCeEEEEcC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceeeCCCCCCchHHHHHHhhhcCCccE
Q 047713          144 KGQSVAIFGL--GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK----FGVTEFVNPKDYDKPVQQVIADMTNGGVDR  217 (329)
Q Consensus       144 ~g~~VlI~Ga--g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~  217 (329)
                      .|.+||=.++  |.+|+.|    ...|+++|+.++.+++..+.+++    ++...-+..-..+  ..+.+.. ..+.+|+
T Consensus        14 ~g~~vlDl~~GtG~~~iea----~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D--~~~~l~~-~~~~fDi   86 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAIEA----VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKME--AERAIDC-LTGRFDL   86 (152)
T ss_dssp             CSCEEEEETCTTCHHHHHH----HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSC--HHHHHHH-BCSCEEE
T ss_pred             CCCeEEEcCCccCHHHHHH----HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccc--ccccccc-cccccce
Confidence            5888887754  6665533    34688899999999887766543    4553322111222  4444433 3348999


Q ss_pred             EEE
Q 047713          218 SVE  220 (329)
Q Consensus       218 Vid  220 (329)
                      ||-
T Consensus        87 If~   89 (152)
T d2esra1          87 VFL   89 (152)
T ss_dssp             EEE
T ss_pred             eEe
Confidence            873

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=82.08  E-value=1.8  Score=36.57  Aligned_cols=55  Identities=20%  Similarity=0.123  Sum_probs=40.1

Q ss_pred             CCCCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHhcCCceeeC
Q 047713          141 KPKKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDL--NPSRFNEAKKFGVTEFVN  195 (329)
Q Consensus       141 ~~~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~--~~~~~~~~~~lg~~~~~~  195 (329)
                      +++++.+|+-..+|+.|++.+..++.+|.+.++.+..  +++|.+.++.+|++.+..
T Consensus       140 ~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         140 RVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeec
Confidence            4677776544456999999999999999953333332  557888899999876543

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.06  E-value=0.53  Score=38.63  Aligned_cols=31  Identities=29%  Similarity=0.402  Sum_probs=27.0

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLNP  179 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~  179 (329)
                      |+|+|+|..|+.++..++..|. +|++++.++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            6788999999999999999998 788887543

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.83  E-value=0.9  Score=35.61  Aligned_cols=33  Identities=33%  Similarity=0.460  Sum_probs=28.1

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHH-HHcCCCEEEEEc
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGA-RVSGASRIIGVD  176 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la-~~~G~~~vv~~~  176 (329)
                      -+|.+|+|.|.|.+|..+++.+ +..|+ ++++++
T Consensus        29 l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             TTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence            4689999999999999999877 56799 788775

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=81.63  E-value=3.2  Score=28.80  Aligned_cols=88  Identities=22%  Similarity=0.291  Sum_probs=52.5

Q ss_pred             CCCeEEEEcCCH--H---------HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhc
Q 047713          144 KGQSVAIFGLGA--V---------GLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN  212 (329)
Q Consensus       144 ~g~~VlI~Gag~--i---------G~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  212 (329)
                      .-++|||+|+|+  +         +.-++.-++..|. +++.+.++++....-..+ +++++...=    ....+.+...
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYfePl----t~e~v~~Ii~   79 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYIEPI----HWEVVRKIIE   79 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEECSCC----CHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeeeecC----CHHHHHHHHH
Confidence            357899998864  2         2344445556799 788888887754222121 334432111    2223333333


Q ss_pred             C-CccEEEEecCCHHHHHHHHHhhcc
Q 047713          213 G-GVDRSVECTGSVQAMISAFECVHD  237 (329)
Q Consensus       213 ~-~~d~Vid~~g~~~~~~~~~~~l~~  237 (329)
                      . +.|.|+-..|+.-.++.+.++...
T Consensus        80 ~E~pd~il~~~GGQtalnla~~L~~~  105 (127)
T d1a9xa3          80 KERPDAVLPTMGGQTALNCALELERQ  105 (127)
T ss_dssp             HHCCSEEECSSSHHHHHHHHHHHHHT
T ss_pred             HhCcCCeEEEeeeehHhHHHHHHHHc
Confidence            3 788999999887777777776543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=81.61  E-value=1.3  Score=33.29  Aligned_cols=39  Identities=26%  Similarity=0.351  Sum_probs=32.5

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKK  187 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~  187 (329)
                      +|.|.|.|-+|+..+.++ +.|. +|++++.++++.+.+++
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            477889999999877655 4688 89999999999888764

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=81.53  E-value=0.42  Score=38.37  Aligned_cols=60  Identities=20%  Similarity=0.351  Sum_probs=36.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhhcC-CccEEEEecC
Q 047713          147 SVAIFGL-GAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTG  223 (329)
Q Consensus       147 ~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~d~Vid~~g  223 (329)
                      +|||+|+ |-+|...+..+...|  .+++++.....      +    ..|..+    . +.+++...+ ++|+||+++|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g--~~v~~~~~~~~------~----~~Dl~~----~-~~~~~~i~~~~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVG--NLIALDVHSKE------F----CGDFSN----P-KGVAETVRKLRPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTS--EEEEECTTCSS------S----CCCTTC----H-HHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCC--CEEEEECCCcc------c----cCcCCC----H-HHHHHHHHHcCCCEEEEecc
Confidence            5899987 999999998777666  45555443221      1    112211    1 223333334 6899999886

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.53  E-value=1.7  Score=35.74  Aligned_cols=30  Identities=20%  Similarity=0.206  Sum_probs=26.3

Q ss_pred             CeEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc
Q 047713          146 QSVAIFGL-GAVGLAAAEGARVSGASRIIGVD  176 (329)
Q Consensus       146 ~~VlI~Ga-g~iG~aai~la~~~G~~~vv~~~  176 (329)
                      ++|||+|+ |-+|...+..+...|. .|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            68999987 9999999999988898 788875

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=81.45  E-value=0.91  Score=33.65  Aligned_cols=100  Identities=19%  Similarity=0.262  Sum_probs=53.7

Q ss_pred             eEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcC--ChhhHHHHHhcCCceeeCC-----CCCC----c-----hHHHHHHh
Q 047713          147 SVAIFGLGAVGLAAAEGARVS-GASRIIGVDL--NPSRFNEAKKFGVTEFVNP-----KDYD----K-----PVQQVIAD  209 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~-G~~~vv~~~~--~~~~~~~~~~lg~~~~~~~-----~~~~----~-----~~~~~~~~  209 (329)
                      +|.|.|-|-+|.++...+... .. .++++-.  +.+...++-++...+--..     .+..    .     ...+...+
T Consensus         3 kIgINGfGRIGR~v~R~~l~~~~~-~ivaINd~~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~~   81 (171)
T d3cmco1           3 KVGINGFGRIGRNVFRAALKNPDI-EVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPEN   81 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHTTCTTE-EEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCc-EEEEEcCCCCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCCHHH
Confidence            578889999999998777543 34 5666643  2233334433322111000     0000    0     00001122


Q ss_pred             hhc-C-CccEEEEecCCHHHHHHHHHhhccCCeEEEEeccC
Q 047713          210 MTN-G-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP  248 (329)
Q Consensus       210 ~~~-~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~~  248 (329)
                      +.. . ++|+|+||+|.-...+.+...|..+ .+=|.+..+
T Consensus        82 i~W~~~~vDiViEcTG~f~t~~~~~~hl~~g-akkViiSap  121 (171)
T d3cmco1          82 LAWGEIGVDIVVESTGRFTKREDAAKHLEAG-AKKVIISAP  121 (171)
T ss_dssp             CCTGGGTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSC
T ss_pred             ccccccCCcEEEEecCccCCHHHHHHHHhCC-CceEEEecc
Confidence            222 2 7999999999766667777778765 544555443

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.37  E-value=6.9  Score=31.49  Aligned_cols=51  Identities=29%  Similarity=0.225  Sum_probs=36.4

Q ss_pred             CCeEEEEc-CCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHhcCCceeeC
Q 047713          145 GQSVAIFG-LGAVGLAAAEGARVSGASRIIGVDL--NPSRFNEAKKFGVTEFVN  195 (329)
Q Consensus       145 g~~VlI~G-ag~iG~aai~la~~~G~~~vv~~~~--~~~~~~~~~~lg~~~~~~  195 (329)
                      |..-+|.. +|+.|.+++..|+.+|.+-++.+..  +++|.+.++.+|+..+..
T Consensus        53 g~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~v~~~  106 (319)
T d1p5ja_          53 GCAHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVV  106 (319)
T ss_dssp             TCCEEEECCSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHhhhccccceeccccccccccccccccceeccccc
Confidence            33445666 4999999999999999864444433  446778888888865543

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=81.27  E-value=0.57  Score=34.66  Aligned_cols=32  Identities=38%  Similarity=0.456  Sum_probs=26.3

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCC-EEEEE
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGAS-RIIGV  175 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~-~vv~~  175 (329)
                      ++++|+|.|+|.+|+-++..++.+|.+ .|+-.
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEe
Confidence            478999999999999999999999874 34433

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=81.22  E-value=1.3  Score=34.03  Aligned_cols=92  Identities=14%  Similarity=0.039  Sum_probs=55.2

Q ss_pred             CCCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceeeCCCCCCchHHHHHHhhh-cCCccEEEEe
Q 047713          143 KKGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMT-NGGVDRSVEC  221 (329)
Q Consensus       143 ~~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~d~Vid~  221 (329)
                      .++.+||=.|+|. |..+..+++ .|. +|++++.+++..+.+++...+.+- ....+      +.+.. .+.+|+|+-.
T Consensus        19 ~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~-~~~~~------~~~~~~~~~fD~I~~~   88 (225)
T d2p7ia1          19 FRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGIT-YIHSR------FEDAQLPRRYDNIVLT   88 (225)
T ss_dssp             CCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEE-EEESC------GGGCCCSSCEEEEEEE
T ss_pred             CCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhcccccccc-ccccc------cccccccccccccccc
Confidence            4577899888764 766666665 466 799999999999888764322111 10111      11222 2379998732


Q ss_pred             c-----CC-HHHHHHHH-HhhccCCeEEEEe
Q 047713          222 T-----GS-VQAMISAF-ECVHDGWGVAVLV  245 (329)
Q Consensus       222 ~-----g~-~~~~~~~~-~~l~~~~G~vv~~  245 (329)
                      -     -. ...+.... ++|+++ |.++..
T Consensus        89 ~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~  118 (225)
T d2p7ia1          89 HVLEHIDDPVALLKRINDDWLAEG-GRLFLV  118 (225)
T ss_dssp             SCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             ceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence            1     11 22344454 578897 877765

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=81.18  E-value=1.1  Score=33.68  Aligned_cols=34  Identities=24%  Similarity=0.386  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          144 KGQSVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       144 ~g~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      .+.+|.|+|.|.+|...+++++.+|. +|+..+..
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~   76 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIE   76 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeecccc
Confidence            57899999999999999999999999 89998764

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=81.11  E-value=0.69  Score=35.39  Aligned_cols=29  Identities=24%  Similarity=0.304  Sum_probs=25.7

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDL  177 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~  177 (329)
                      |+|+|+|+.|+.|+..|...|. +|+.++.
T Consensus         6 viIIGgGpAGl~aA~~aar~G~-~V~viE~   34 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEK   34 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEEC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEec
Confidence            6788999999999999999998 7888875

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.10  E-value=0.72  Score=37.40  Aligned_cols=30  Identities=37%  Similarity=0.568  Sum_probs=26.5

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      |+|+|+|..|+.++.-|...|+ +|+.++..
T Consensus        19 VlVIG~G~aGl~aA~~la~~G~-~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGSGGAGFSAAISATDSGA-KVILIEKE   48 (308)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            7888999999999999999999 78888754

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.06  E-value=0.73  Score=34.63  Aligned_cols=31  Identities=19%  Similarity=0.118  Sum_probs=26.5

Q ss_pred             CeEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 047713          146 QSVAIFGLGAVGLAAAEGARVSGASRIIGVDL  177 (329)
Q Consensus       146 ~~VlI~Gag~iG~aai~la~~~G~~~vv~~~~  177 (329)
                      ..|+|+|+|+.|+.++..|...|. +++.++.
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~   36 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAEL-KPLLFEG   36 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CCEEECC
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-cEEEEEe
Confidence            578999999999999988888999 6777764

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.97  E-value=0.77  Score=35.11  Aligned_cols=30  Identities=37%  Similarity=0.402  Sum_probs=26.1

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          148 VAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       148 VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      |+|+|+|+.|+.++..|...|. +|..++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            6778999999999999999998 78888653

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=80.93  E-value=0.78  Score=37.05  Aligned_cols=32  Identities=28%  Similarity=0.386  Sum_probs=26.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGASRIIGVDLN  178 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~~vv~~~~~  178 (329)
                      .|+|+|+|.+|++++.-+...|.++|+.++.+
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            58999999999988887777786468888754

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.93  E-value=3.7  Score=32.94  Aligned_cols=46  Identities=20%  Similarity=0.172  Sum_probs=34.3

Q ss_pred             EEE-cCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHhcCCceee
Q 047713          149 AIF-GLGAVGLAAAEGARVSGASRIIGVDL--NPSRFNEAKKFGVTEFV  194 (329)
Q Consensus       149 lI~-Gag~iG~aai~la~~~G~~~vv~~~~--~~~~~~~~~~lg~~~~~  194 (329)
                      +|. .+|+.|++++..++.+|.+.++.+..  ++.|.+.++.+|++.+.
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~~  106 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVL  106 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccccCCcEEEE
Confidence            444 56999999999999999864444433  56788889999986543

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=80.59  E-value=0.6  Score=38.48  Aligned_cols=32  Identities=28%  Similarity=0.340  Sum_probs=25.1

Q ss_pred             eEEEEcCCHHHHHHHHHHH-----HcCCCEEEEEcCCh
Q 047713          147 SVAIFGLGAVGLAAAEGAR-----VSGASRIIGVDLNP  179 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~-----~~G~~~vv~~~~~~  179 (329)
                      -|+|.|+|++|++++..+.     ..|. +|+.++..+
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            3788999999998887763     4688 788887643

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=80.57  E-value=5.1  Score=28.76  Aligned_cols=87  Identities=9%  Similarity=0.088  Sum_probs=54.0

Q ss_pred             eEEEEcCCHHHHH-HHHHHHHc-CCCEEEEEcCChhhH-HHHHhcCCceeeCCCCCCchHHHHHHhhhcCCccEEEEecC
Q 047713          147 SVAIFGLGAVGLA-AAEGARVS-GASRIIGVDLNPSRF-NEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTG  223 (329)
Q Consensus       147 ~VlI~Gag~iG~a-ai~la~~~-G~~~vv~~~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~Vid~~g  223 (329)
                      +|.|.|.|.+|.- .+..++.. +.+.+.+++.++++. +..++++... ++  +    ....+     ..+|+|+.++.
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~~--~----~~~l~-----~~~D~V~I~tp   70 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-AD--S----LSSLA-----ASCDAVFVHSS   70 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-CS--S----HHHHH-----TTCSEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-cc--c----chhhh-----hhccccccccc
Confidence            5788899999964 45555544 663333444555544 4456776542 11  1    22221     24899999998


Q ss_pred             CHHHHHHHHHhhccCCeEEEEecc
Q 047713          224 SVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       224 ~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      ...+.+.+..++..  |.-+.+..
T Consensus        71 ~~~h~~~~~~al~~--gk~V~~EK   92 (164)
T d1tlta1          71 TASHFDVVSTLLNA--GVHVCVDK   92 (164)
T ss_dssp             TTHHHHHHHHHHHT--TCEEEEES
T ss_pred             chhccccccccccc--cceeeccc
Confidence            77778888888876  55566654

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=80.48  E-value=0.95  Score=32.85  Aligned_cols=91  Identities=24%  Similarity=0.130  Sum_probs=52.7

Q ss_pred             CCeEEEEcC-CHHHHHHHHHHHHcC--CCEEEEEcCChhhHHHHHhcCCce-eeCCCCCCchHHHHHHhhhcCCccEEEE
Q 047713          145 GQSVAIFGL-GAVGLAAAEGARVSG--ASRIIGVDLNPSRFNEAKKFGVTE-FVNPKDYDKPVQQVIADMTNGGVDRSVE  220 (329)
Q Consensus       145 g~~VlI~Ga-g~iG~aai~la~~~G--~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~d~Vid  220 (329)
                      |-+|.|.|+ |-+|.-.++++..+.  ...+...+++...-.......... .....+.+           ....|+++-
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~-----------~~~~d~~f~   69 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETA-----------FEGVDIALF   69 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTT-----------TTTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhh-----------hhhhhhhhh
Confidence            457999998 999999999998774  224444443221110000000000 01111111           125899999


Q ss_pred             ecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          221 CTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       221 ~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      +.+.....+...+.+..+ .+++..+.
T Consensus        70 ~~~~~~s~~~~~~~~~~~-~~VIDlSs   95 (154)
T d2gz1a1          70 SAGSSTSAKYAPYAVKAG-VVVVDNTS   95 (154)
T ss_dssp             CSCHHHHHHHHHHHHHTT-CEEEECSS
T ss_pred             ccCccchhhHHhhhcccc-ceehhcCh
Confidence            988766666776677776 88888864

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=80.29  E-value=8.4  Score=28.11  Aligned_cols=100  Identities=19%  Similarity=0.186  Sum_probs=51.7

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcCCC--EEEEEcC--ChhhHHHHHhcCCce------eeCCCCC----Cch-----HHHHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSGAS--RIIGVDL--NPSRFNEAKKFGVTE------FVNPKDY----DKP-----VQQVI  207 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G~~--~vv~~~~--~~~~~~~~~~lg~~~------~~~~~~~----~~~-----~~~~~  207 (329)
                      +|.|.|-|-+|.++...+....-.  .++++--  +.+...++-++...+      +....+.    +..     -.+..
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~p   81 (172)
T d1rm4a1           2 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNP   81 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSCG
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCCEEEEEEcCCCCHHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecCCCh
Confidence            578899999999999876543321  4555533  223334443332211      1000000    000     00001


Q ss_pred             Hhhhc-C-CccEEEEecCCHHHHHHHHHhhccCCeEEEEecc
Q 047713          208 ADMTN-G-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV  247 (329)
Q Consensus       208 ~~~~~-~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g~  247 (329)
                      .++.- . ++|+|+||+|.-...+.+...|..+ .+=|.+..
T Consensus        82 ~~i~W~~~gvDiViEcTG~f~~~~~~~~hl~~G-akkViiSA  122 (172)
T d1rm4a1          82 VNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAG-AKKVLITA  122 (172)
T ss_dssp             GGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTT-CSCEEESS
T ss_pred             HHCChhhcCCCEEEecCceEccHHHHHHHHhcC-CceEEeec
Confidence            11111 2 7999999999755666777778765 54444444

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=80.22  E-value=1.8  Score=34.44  Aligned_cols=29  Identities=24%  Similarity=0.379  Sum_probs=24.2

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCCEEEEEc
Q 047713          148 VAIFGL-GAVGLAAAEGARVSGASRIIGVD  176 (329)
Q Consensus       148 VlI~Ga-g~iG~aai~la~~~G~~~vv~~~  176 (329)
                      |||+|+ |-+|..++..+...|..+|++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d   31 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVD   31 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEE
Confidence            789986 99999999888877865688875

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.02  E-value=8.6  Score=27.79  Aligned_cols=91  Identities=16%  Similarity=0.087  Sum_probs=50.4

Q ss_pred             eEEEEcCCHHHHHHHHHHHHcC--CC-EEEEEcCChhh---------------HHHHHhcCCceeeCCCCCCchHHHHHH
Q 047713          147 SVAIFGLGAVGLAAAEGARVSG--AS-RIIGVDLNPSR---------------FNEAKKFGVTEFVNPKDYDKPVQQVIA  208 (329)
Q Consensus       147 ~VlI~Gag~iG~aai~la~~~G--~~-~vv~~~~~~~~---------------~~~~~~lg~~~~~~~~~~~~~~~~~~~  208 (329)
                      +|.+.|.|.+|...++++....  .+ +++++..+...               .+..+....      ....  ......
T Consensus         6 ~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~   77 (168)
T d1ebfa1           6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTT------KTLP--LDDLIA   77 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCC------BCCC--HHHHHH
T ss_pred             EEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhccc------cccc--HHHHHH
Confidence            5677899999999998776532  21 45555432211               111111100      0111  211222


Q ss_pred             hhhcC-CccEEEEecCCHHHHHHHHHhhccCCeEEEEec
Q 047713          209 DMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVG  246 (329)
Q Consensus       209 ~~~~~-~~d~Vid~~g~~~~~~~~~~~l~~~~G~vv~~g  246 (329)
                      ..... ..++++|+.++.+......+.|..+ =++|...
T Consensus        78 ~~~~~~~~~vivd~t~~~~~~~~~~~aL~~G-~hVVTAN  115 (168)
T d1ebfa1          78 HLKTSPKPVILVDNTSSAYIAGFYTKFVENG-ISIATPN  115 (168)
T ss_dssp             HHTTCSSCEEEEECSCCHHHHTTHHHHHHTT-CEEECCC
T ss_pred             HhccCCCceEEEEecCChHHHHHHHHHHHcC-CeEEecC
Confidence            22223 6789999999887776667778876 5666543