Citrus Sinensis ID: 047725

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
PDSCAMLEDLSVTFYVILILMSWLHLTILGIIQRLQGFIYHGFNESKLHLEGFSNIQPNGLLQMSNSSQLTKGHAFYPYPLNFNTSSPQSLSFSTNFVFAMVPVNTGGHGMAFLFSPSLDLSQALASAHLGLLNSTNNGQSTNHIIAVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDEGSYISLDLQSGNPMQIWIDYNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGILKSNQYILGWSFSRSAEAQNLDISKLPILPLMNSELETQVLQVV
cccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccEEEEcEEEcccccEEccccccccEEEEEccccEEEccccccEEEEEEEEEEEEEEccccccEEEEEEEccccccccccccccccccccccccccccEEEEEEccccccccccccccEEEEEEccccccccccccccccccccEEEEccccccEEEEEEEEccccEEEEEEEEccccccccEEEEEEEccccccccEEEEEEEEEccccccEEEEEEEEEEEcccccccccccccccccccccccccEEEEc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccEEEccEEEEccccEEEEccccccccccEccccccEEccccccEEEEEEEEEEEEEcccccccEEEEEEEcccccccccHHHHHEEEEcccccccccEEEEEEEEccccccHcccccccEEEEEccccEcccccccEEccccccEEEEEEccccEEEEEEcccccEEEEEEEcccccccccccEEEEEEccHHHccccEEEEEEcccccEccEEEEEEEEEccccccccccHHHccccccccccccccEEEEc
pdscamleDLSVTFYVILILMSWLHLTILGIIQRLQGFiyhgfnesklhlegfsniqpngllqmsnssqltkghafypyplnfntsspqslsfsTNFVFAmvpvntgghgmaflfspSLDLSQALASAHLGLlnstnngqstNHIIAVELDTvqsvefkdlngthvgidvnslisndsapaayfsdegsyisldlqsgnpmqiwidyngeerllnvtlapirvskpnrpllstpldLSQILLDTMYvgfsastgilksnqyilgwsfsrsaeaqnldisklpilplmnselETQVLQVV
PDSCAMLEDLSVTFYVILILMSWLHLTILGIIQRLQGFIYHGFNESKLHLEGFSNIQPNGLLQMSNSSQLTKGHAFYPYPLNFNTSSPQSLSFSTNFVFAMVPVNTGGHGMAFLFSPSLDLSQALASAHLGLLNSTNNGQSTNHIIAVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDEGSYISLDLQSGNPMQIWIDYNGEERLLNVTLAPirvskpnrpllstpLDLSQILLDTMYVGFSASTGILKSNQYILGWSFSRSAEAQNLDISklpilplmnseletqvlqvv
PDSCAMLEDLSVTFYVILILMSWLHLTILGIIQRLQGFIYHGFNESKLHLEGFSNIQPNGLLQMSNSSQLTKGHAFYPYPLNFNTSSPQSLSFSTNFVFAMVPVNTGGHGMAFLFSPSLDLSQALASAHLGLLNSTNNGQSTNHIIAVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDEGSYISLDLQSGNPMQIWIDYNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGILKSNQYILGWSFSRSAEAQNLDISKLPILPLMNSELETQVLQVV
****AMLEDLSVTFYVILILMSWLHLTILGIIQRLQGFIYHGFNESKLHLEGFSNIQPNGLL*******LTKGHAFYPYPLNFNTSSPQSLSFSTNFVFAMVPVNTGGHGMAFLFSPSLDLSQALASAHLGLLNSTNNGQSTNHIIAVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDEGSYISLDLQSGNPMQIWIDYNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGILKSNQYILGWSFSRSAEAQNLDISKLPILPL*************
*********LSVTFYVILILMSWLHLTILGIIQRLQGFIYHGFNESKLHLEGFSNIQPNGLLQMSNSSQLTKGHAFYPYPLNFNTSSPQSLSFSTNFVFAMVPVNTGGHGMAFLFSPSLD*****ASA*LGLLNSTNNGQSTNHIIAVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDEGSYISLDLQSGNPMQIWIDYNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGILKSNQYILGWSFSRSAEAQ*L*I**************TQVLQVV
PDSCAMLEDLSVTFYVILILMSWLHLTILGIIQRLQGFIYHGFNESKLHLEGFSNIQPNGLLQMSNSSQLTKGHAFYPYPLNFNTSSPQSLSFSTNFVFAMVPVNTGGHGMAFLFSPSLDLSQALASAHLGLLNSTNNGQSTNHIIAVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDEGSYISLDLQSGNPMQIWIDYNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGILKSNQYILGWSFSRSAEAQNLDISKLPILPLMNSELETQVLQVV
PDSCAMLEDLSVTFYVILILMSWLHLTILGIIQRLQGFIYHGFNESKLHLEGFSNIQPNGLLQMSNSSQLTKGHAFYPYPLNFNTSSPQSLSFSTNFVFAMVPVNTGGHGMAFLFSPSLDLSQALASAHLGLLNSTNNGQSTNHIIAVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDEGSYISLDLQSGNPMQIWIDYNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGILKSNQYILGWSFSRSAEAQNLDISKLPILPLMNSELETQVLQV*
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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PDSCAMLEDLSVTFYVILILMSWLHLTILGIIQRLQGFIYHGFNESKLHLEGFSNIQPNGLLQMSNSSQLTKGHAFYPYPLNFNTSSPQSLSFSTNFVFAMVPVNTGGHGMAFLFSPSLDLSQALASAHLGLLNSTNNGQSTNHIIAVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDEGSYISLDLQSGNPMQIWIDYNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGILKSNQYILGWSFSRSAEAQNLDISKLPILPLMNSELETQVLQVV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query299 2.2.26 [Sep-21-2011]
Q9LSR9 657 L-type lectin-domain cont yes no 0.866 0.394 0.520 7e-71
Q9M3D8 664 L-type lectin-domain cont no no 0.919 0.414 0.496 9e-71
Q9M3D7 667 Putative L-type lectin-do no no 0.849 0.380 0.543 5e-70
Q9M1G3 669 Probable L-type lectin-do no no 0.876 0.391 0.488 2e-65
Q9FJI4 675 Putative L-type lectin-do no no 0.913 0.404 0.492 1e-64
Q7FK82 669 Probable L-type lectin-do no no 0.852 0.381 0.498 4e-63
Q9M3E5 682 Putative L-type lectin-do no no 0.822 0.360 0.537 2e-62
Q9ZW09 627 Probable inactive L-type no no 0.839 0.400 0.496 6e-62
Q9ZW11 623 Putative inactive L-type no no 0.829 0.398 0.501 6e-62
Q9M1G4 674 Probable L-type lectin-do no no 0.903 0.400 0.440 2e-61
>sp|Q9LSR9|LRK18_ARATH L-type lectin-domain containing receptor kinase I.8 OS=Arabidopsis thaliana GN=LECRK18 PE=2 SV=1 Back     alignment and function desciption
 Score =  267 bits (682), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 141/271 (52%), Positives = 200/271 (73%), Gaps = 12/271 (4%)

Query: 23  WLHLTILGII----QRLQGFIYHGFNESKLHLEGFSNIQPNGLLQMSNSSQLTKGHAFYP 78
           W+ ++ L +I    Q+  GF ++GF +  LH++G + I P GLL+++++S+  KGHAF+ 
Sbjct: 9   WMVISFLLLIHLSSQQETGFSFNGFRQGDLHVDGVAQILPGGLLRLTDTSEQKKGHAFFR 68

Query: 79  YPLNFNTSSPQSLSFSTNFVFAMV--PVNTGGHGMAFLFSPSLDLSQALASAHLGLLNST 136
            PL FN+S P  LSFST+FV AMV  P  TGG+G+AF  SPS+DL+ A A+ +LGL N+T
Sbjct: 69  QPLVFNSSEP--LSFSTHFVCAMVRKPGVTGGNGIAFFLSPSMDLTNADATQYLGLFNTT 126

Query: 137 NNGQSTNHIIAVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSD-EGSYISLDL 195
            N   ++HI A+ELDTVQS EF D++  HVGIDVNSL S +SAPA+YFSD +G   S+ L
Sbjct: 127 TNRSPSSHIFAIELDTVQSAEFDDIDNNHVGIDVNSLTSVESAPASYFSDKKGLNKSISL 186

Query: 196 QSGNPMQIWIDYNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGI 255
            SG+ +Q+W+D++G   +LNV+LAP+ + KP++ L+S  ++LS+++ D M+VGFSA+TG 
Sbjct: 187 LSGDSIQVWVDFDGT--VLNVSLAPLGIRKPSQSLISRSMNLSEVIQDRMFVGFSAATGQ 244

Query: 256 LKSNQYILGWSFSRS-AEAQNLDISKLPILP 285
           L +N YILGWSFSRS A  Q+LDISKLP +P
Sbjct: 245 LANNHYILGWSFSRSKASLQSLDISKLPQVP 275

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1
>sp|Q9M3D8|LRK13_ARATH L-type lectin-domain containing receptor kinase I.3 OS=Arabidopsis thaliana GN=LECRK13 PE=1 SV=1 Back     alignment and function description
>sp|Q9M3D7|LRK14_ARATH Putative L-type lectin-domain containing receptor kinase I.4 OS=Arabidopsis thaliana GN=LECRK14 PE=3 SV=1 Back     alignment and function description
>sp|Q9M1G3|LRK16_ARATH Probable L-type lectin-domain containing receptor kinase I.6 OS=Arabidopsis thaliana GN=LECRK16 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJI4|LK111_ARATH Putative L-type lectin-domain containing receptor kinase I.11 OS=Arabidopsis thaliana GN=LECRK111 PE=3 SV=1 Back     alignment and function description
>sp|Q7FK82|LRK12_ARATH Probable L-type lectin-domain containing receptor kinase I.2 OS=Arabidopsis thaliana GN=LECRK12 PE=2 SV=2 Back     alignment and function description
>sp|Q9M3E5|LRK11_ARATH Putative L-type lectin-domain containing receptor kinase I.1 OS=Arabidopsis thaliana GN=LECRK11 PE=3 SV=1 Back     alignment and function description
>sp|Q9ZW09|LRK31_ARATH Probable inactive L-type lectin-domain containing receptor kinase III.1 OS=Arabidopsis thaliana GN=LECRK31 PE=3 SV=1 Back     alignment and function description
>sp|Q9ZW11|LRK32_ARATH Putative inactive L-type lectin-domain containing receptor kinase III.2 OS=Arabidopsis thaliana GN=LECRK32 PE=3 SV=1 Back     alignment and function description
>sp|Q9M1G4|LRK15_ARATH Probable L-type lectin-domain containing receptor kinase I.5 OS=Arabidopsis thaliana GN=LECRK15 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query299
255559006 667 kinase, putative [Ricinus communis] gi|2 0.923 0.413 0.561 1e-78
255558978 662 kinase, putative [Ricinus communis] gi|2 0.896 0.404 0.556 2e-78
255559000 670 kinase, putative [Ricinus communis] gi|2 0.916 0.408 0.55 8e-78
224106419 607 predicted protein [Populus trichocarpa] 0.899 0.443 0.545 2e-77
225434861 675 PREDICTED: L-type lectin-domain containi 0.953 0.422 0.523 2e-77
224106407 675 predicted protein [Populus trichocarpa] 0.879 0.389 0.561 6e-77
255559002 667 BRASSINOSTEROID INSENSITIVE 1-associated 0.866 0.388 0.531 3e-73
297819040 667 lectin protein kinase family protein [Ar 0.899 0.403 0.519 1e-71
297819038 664 lectin protein kinase family protein [Ar 0.919 0.414 0.506 2e-70
15239261 657 concanavalin A-like lectin kinase-like p 0.866 0.394 0.520 4e-69
>gi|255559006|ref|XP_002520526.1| kinase, putative [Ricinus communis] gi|223540368|gb|EEF41939.1| kinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 160/285 (56%), Positives = 208/285 (72%), Gaps = 9/285 (3%)

Query: 10  LSVTFYVILILMS-WLHLTILGIIQRLQGFIYHGFNESKLHLEGFSNIQPNGLLQMSNSS 68
           ++  F  + IL + ++H   L   Q    FIY+GFN + L L G +NI PNGLL+++N+S
Sbjct: 1   MAALFISLSILFTLFVHSKPLAFAQEADQFIYNGFNGANLSLNGAANIHPNGLLELTNTS 60

Query: 69  QLTKGHAFYPYPLNFNTS----SPQSL-SFSTNFVFAMVPVNTG--GHGMAFLFSPSLDL 121
               GHAF+P+PL+FN+S    S  SL SFSTNFVFAMVP + G  GHG+AF  SPSL+ 
Sbjct: 61  HQQIGHAFFPFPLHFNSSLSNNSRTSLVSFSTNFVFAMVPESPGLDGHGLAFAISPSLEF 120

Query: 122 SQALASAHLGLLNSTNNGQSTNHIIAVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPA 181
             A+A+ +LGL NST  G S+NH++A+ELDTV++ EF D++G HVG+DVN+L S  S  A
Sbjct: 121 KGAIATQYLGLFNSTTIGLSSNHLLAIELDTVKNPEFGDIDGNHVGVDVNNLTSIQSVSA 180

Query: 182 AYFSD-EGSYISLDLQSGNPMQIWIDYNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQI 240
           +YFS+ E    SL+L SG PMQ+WIDY+  E+LLNVTLAPI   KP +PLLST +DLS +
Sbjct: 181 SYFSETEEKNKSLELTSGRPMQMWIDYDEMEKLLNVTLAPIERMKPEKPLLSTNIDLSAL 240

Query: 241 LLDTMYVGFSASTGILKSNQYILGWSFSRSAEAQNLDISKLPILP 285
           LL++MYVGFSASTG + SN YILGWSF+RS +AQ+LD SKLP LP
Sbjct: 241 LLESMYVGFSASTGSVSSNHYILGWSFNRSGQAQSLDPSKLPSLP 285

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255558978|ref|XP_002520512.1| kinase, putative [Ricinus communis] gi|223540354|gb|EEF41925.1| kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255559000|ref|XP_002520523.1| kinase, putative [Ricinus communis] gi|223540365|gb|EEF41936.1| kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224106419|ref|XP_002314159.1| predicted protein [Populus trichocarpa] gi|222850567|gb|EEE88114.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225434861|ref|XP_002280641.1| PREDICTED: L-type lectin-domain containing receptor kinase IV.2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224106407|ref|XP_002314156.1| predicted protein [Populus trichocarpa] gi|222850564|gb|EEE88111.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255559002|ref|XP_002520524.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] gi|223540366|gb|EEF41937.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297819040|ref|XP_002877403.1| lectin protein kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297323241|gb|EFH53662.1| lectin protein kinase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297819038|ref|XP_002877402.1| lectin protein kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297323240|gb|EFH53661.1| lectin protein kinase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15239261|ref|NP_200836.1| concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana] gi|75335417|sp|Q9LSR9.1|LRK18_ARATH RecName: Full=L-type lectin-domain containing receptor kinase I.8; Short=LecRK-I.8; Flags: Precursor gi|8885578|dbj|BAA97508.1| receptor-like protein kinase [Arabidopsis thaliana] gi|34365777|gb|AAQ65200.1| At5g60280 [Arabidopsis thaliana] gi|62320942|dbj|BAD93956.1| receptor like protein kinase [Arabidopsis thaliana] gi|332009919|gb|AED97302.1| concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query299
TAIR|locus:2078342 667 AT3G45420 [Arabidopsis thalian 0.849 0.380 0.543 1.1e-69
TAIR|locus:2144025 657 AT5G60280 [Arabidopsis thalian 0.926 0.421 0.503 1.7e-68
TAIR|locus:2078337 664 AT3G45410 [Arabidopsis thalian 0.919 0.414 0.496 9.2e-68
TAIR|locus:2078332 682 AT3G45330 [Arabidopsis thalian 0.939 0.412 0.498 5.2e-65
TAIR|locus:2158309 675 AT5G60320 [Arabidopsis thalian 0.936 0.414 0.489 2.6e-63
TAIR|locus:2085587 669 AT3G45440 [Arabidopsis thalian 0.859 0.384 0.498 8.8e-63
TAIR|locus:2043127 623 AT2G29250 [Arabidopsis thalian 0.846 0.406 0.507 1e-61
TAIR|locus:2043162 627 AT2G29220 [Arabidopsis thalian 0.913 0.435 0.473 4.3e-61
TAIR|locus:2168509 674 AT5G59260 [Arabidopsis thalian 0.889 0.394 0.468 9e-61
TAIR|locus:2144045 766 LecRK-I.9 "lectin receptor kin 0.879 0.343 0.469 1.2e-60
TAIR|locus:2078342 AT3G45420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
 Identities = 143/263 (54%), Positives = 192/263 (73%)

Query:    33 QRLQGFIYHGFNESKLHLEGFSNIQPNGLLQMSNSSQLTKGHAFYPYPLNFNTSSPQSLS 92
             Q+  GF+Y+GF++  L ++G + I P GLLQ++N+SQL  GHAF+  P  F+ SS  SLS
Sbjct:    22 QQETGFVYNGFHQEDLFIDGIAMILPGGLLQLTNASQLKIGHAFFKQPFGFDPSS--SLS 79

Query:    93 FSTNFVFAMVPVNTG---GHGMAFLFSPSLDLSQALASAHLGLLNSTNNGQSTNHIIAVE 149
             F T+FV A+VP   G   GHGMAF+ SPS++ S A  + +LG+ NS+ N  S++H++A+E
Sbjct:    80 FYTHFVCALVPPKFGAEVGHGMAFVVSPSMNFSHAFPTQYLGVFNSSTNVTSSSHLLAIE 139

Query:   150 LDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDE-GSYISLDLQSGNPMQIWIDYN 208
             LDTV++V+F DL   HVGIDVN+ IS +SA  +YFSD  G  IS++L SG P+Q+WIDY+
Sbjct:   140 LDTVETVDFHDLEKAHVGIDVNNPISIESALPSYFSDALGKNISINLVSGEPVQVWIDYD 199

Query:   209 GEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGILKSNQYILGWSFS 268
             G   LLNVTLAPI + KPNRPL+S  ++LS+I  D MY+GFS S G L SNQYILGWSFS
Sbjct:   200 GS--LLNVTLAPIEIQKPNRPLISRDINLSEIFQDKMYIGFSGSNGRLTSNQYILGWSFS 257

Query:   269 RSAE-AQNLDISKLPILPLMNSE 290
             +S E  Q+LD+SKLP  P+  +E
Sbjct:   258 KSKEFMQSLDLSKLPQAPIPRNE 280
GO:0004672 "protein kinase activity" evidence=IEA
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0005739 "mitochondrion" evidence=IDA
TAIR|locus:2144025 AT5G60280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078337 AT3G45410 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078332 AT3G45330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2158309 AT5G60320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085587 AT3G45440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043127 AT2G29250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043162 AT2G29220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168509 AT5G59260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144045 LecRK-I.9 "lectin receptor kinase I.9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00024271001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (675 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query299
pfam00139231 pfam00139, Lectin_legB, Legume lectin domain 6e-92
cd06899236 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume 2e-88
cd01951223 cd01951, lectin_L-type, legume lectins 1e-27
>gnl|CDD|215744 pfam00139, Lectin_legB, Legume lectin domain Back     alignment and domain information 
 Score =  272 bits (697), Expect = 6e-92
 Identities = 114/236 (48%), Positives = 152/236 (64%), Gaps = 14/236 (5%)

Query: 38  FIYHGF-NESKLHLEGFSNIQPNGLLQMSNSSQLTKGHAFYPYPLNFNTSSPQSL-SFST 95
           F Y+GF N S L L+G + + PNGLLQ++N +  + G A Y  P+    SS   + SFST
Sbjct: 5   FNYNGFSNVSNLTLQGDATVLPNGLLQLTNVTNNSAGRALYSKPIRLWDSSTGKVASFST 64

Query: 96  NFVFAMVPVN---TGGHGMAFLFSPSLDLSQALASAHLGLLNSTNNGQSTNHIIAVELDT 152
           +FVFA+  +     GG G+AF  +PS     A +  +LGL NS+NNG S+NHI+AVE DT
Sbjct: 65  SFVFAIKNIPKSTNGGDGLAFFLAPSGTQPGASSGGYLGLFNSSNNGNSSNHIVAVEFDT 124

Query: 153 VQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDEGSYISLDLQSGNPMQIWIDYNGEER 212
             + EF D++  HVGIDVNS+IS  S  A       S++ LDL SG P+Q+WIDY+G  +
Sbjct: 125 FLNPEFNDIDDNHVGIDVNSIISVASESA-------SFVPLDLNSGKPIQVWIDYDGSSK 177

Query: 213 LLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGILKSNQYILGWSFS 268
            L+VTLA    +KP RPLLS  +DLS +L + +YVGFSASTG    + Y+L WSFS
Sbjct: 178 RLSVTLAY--PNKPKRPLLSASVDLSTVLPEWVYVGFSASTGGATESHYVLSWSFS 231

Length = 231
>gnl|CDD|173887 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor Back     alignment and domain information
>gnl|CDD|173886 cd01951, lectin_L-type, legume lectins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 299
cd06899236 lectin_legume_LecRK_Arcelin_ConA legume lectins, l 100.0
PF00139236 Lectin_legB: Legume lectin domain; InterPro: IPR00 100.0
cd01951223 lectin_L-type legume lectins. The L-type (legume-t 100.0
cd07308218 lectin_leg-like legume-like lectins: ERGIC-53, ERG 99.95
cd06902225 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran 99.93
cd06901248 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr 99.91
cd06903215 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem 99.88
PF03388229 Lectin_leg-like: Legume-like lectin family; InterP 99.86
KOG3838 497 consensus Mannose lectin ERGIC-53, involved in gly 99.77
KOG3839351 consensus Lectin VIP36, involved in the transport 99.68
cd06900255 lectin_VcfQ VcfQ bacterial pilus biogenesis protei 99.44
>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor Back     alignment and domain information 
Probab=100.00  E-value=1.2e-56  Score=405.73  Aligned_cols=228  Identities=47%  Similarity=0.772  Sum_probs=204.6

Q ss_pred             eeEEeCCCCC--CCcEEecceEEcCCCeEEecCCC--CCeEEEEEeCCCeeecC-CCCCccceEEEEEEEEeec--CCCC
Q 047725           36 QGFIYHGFNE--SKLHLEGFSNIQPNGLLQMSNSS--QLTKGHAFYPYPLNFNT-SSPQSLSFSTNFVFAMVPV--NTGG  108 (299)
Q Consensus        36 ~~F~f~~F~~--~~l~l~GdA~v~~~g~l~LT~~~--~~~~G~v~y~~Pi~l~d-~s~~~~sF~t~F~F~I~~~--~~~g  108 (299)
                      ++|+|++|..  ++|.++|+|.+..++.||||++.  ++|+|||||++||+||+ .++.++||+|+|+|+|.+.  ..+|
T Consensus         1 ~~f~f~~f~~~~~~l~l~G~A~~~~~~~i~LT~~~~~~~~~G~v~y~~pi~l~~~~~~~~~sFst~F~F~i~~~~~~~~g   80 (236)
T cd06899           1 LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTGKVASFSTSFSFSITPPNPSLGG   80 (236)
T ss_pred             CceecCCCCCCCCCEEEecceEcCCCCeEEecCCCCCCcceEEEEeCCCEEeecCCCCCceeEEEEEEEEEEcCCCCCCC
Confidence            4799999985  89999999998658999999999  89999999999999999 7889999999999999976  5789


Q ss_pred             cceEEEEccCCCCCccCCCccccCCCCCCCCCCCCcEEEEEEecccccccCCCCCCeEEEecCCCcccCCccCccccCCC
Q 047725          109 HGMAFLFSPSLDLSQALASAHLGLLNSTNNGQSTNHIIAVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDEG  188 (299)
Q Consensus       109 DGlAF~l~~~~~~~~~~~G~~lGl~~~~~~g~~~~~~vAVEFDT~~n~~~~Dp~~~HVgIdvn~~~s~~t~~~~~~~~~G  188 (299)
                      |||||||+|++..+.+..|++|||.+.++.+...++.||||||||+|.+++||+.+||||++|++.|..+..+..     
T Consensus        81 dGlAF~i~~~~~~~~~~~G~~lG~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~nHigIdvn~~~S~~~~~~~~-----  155 (236)
T cd06899          81 DGLAFFLAPTDSLPPASSGGYLGLFNSSNNGNSSNHIVAVEFDTFQNPEFGDPDDNHVGIDVNSLVSVKAGYWDD-----  155 (236)
T ss_pred             CeEEEEEecCCCCCCCCCcceeeeecCCCCCCcccceEEEEeecccCcccCCCCCCeEEEEcCCcccceeecccc-----
Confidence            999999999876555678999999988766556789999999999999888999999999999987766544431     


Q ss_pred             ceeeeecCCCCcEEEEEEeeCCCcEEEEEEeecCCCCCCcceEEEeecCCcCCCCeeEEEEEeecCCceeceEEEEEEEE
Q 047725          189 SYISLDLQSGNPMQIWIDYNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGILKSNQYILGWSFS  268 (299)
Q Consensus       189 ~~~~~~l~~G~~~~v~I~Y~~~~~~L~V~l~~~~~~~p~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~h~I~sWsF~  268 (299)
                        ..+.|.+|+.++|||+|++.+++|+|+|+..+..+|.++++++.+||+.+|+++|||||||+||+..|.|+|++|+|+
T Consensus       156 --~~~~l~~g~~~~v~I~Y~~~~~~L~V~l~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFSasTG~~~~~h~i~sWsF~  233 (236)
T cd06899         156 --DGGKLKSGKPMQAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHYILSWSFS  233 (236)
T ss_pred             --ccccccCCCeEEEEEEEcCCCCEEEEEEEeCCCCCCcCCEEEEeccHHHhCCCceEEEEEeEcCCCcceEEEEEEEEE
Confidence              124588999999999999999999999998876688999999999999999999999999999999999999999999


Q ss_pred             ec
Q 047725          269 RS  270 (299)
Q Consensus       269 s~  270 (299)
                      +.
T Consensus       234 s~  235 (236)
T cd06899         234 SN  235 (236)
T ss_pred             cC
Confidence            85

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin
>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported Back     alignment and domain information
>cd01951 lectin_L-type legume lectins Back     alignment and domain information
>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47 Back     alignment and domain information
>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain Back     alignment and domain information
>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain Back     alignment and domain information
>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain Back     alignment and domain information
>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates Back     alignment and domain information
>KOG3838 consensus Mannose lectin ERGIC-53, involved in glycoprotein traffic [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG3839 consensus Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query299
3ipv_B239 Crystal Structure Of Spatholobus Parviflorus Seed L 5e-16
3ipv_A251 Crystal Structure Of Spatholobus Parviflorus Seed L 1e-15
1gnz_A257 Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)m 2e-15
1hql_A257 The Xenograft Antigen In Complex With The B4 Isolec 2e-15
2fmd_A240 Structural Basis Of Carbohydrate Recognition By Bow 2e-15
1fat_A252 Phytohemagglutinin-L Length = 252 2e-15
1g8w_A233 Improved Structure Of Phytohemagglutinin-L From The 2e-15
3usu_A256 Crystal Structure Of Butea Monosperma Seed Lectin L 3e-15
3usu_B242 Crystal Structure Of Butea Monosperma Seed Lectin L 3e-15
1avb_A226 Arcelin-1 From Phaseolus Vulgaris L Length = 226 2e-13
3ujo_A281 Galactose-Specific Seed Lectin From Dolichos Lablab 2e-13
1qnw_A242 Lectin Ii From Ulex Europaeus Length = 242 2e-12
1lul_A253 Db58, A Legume Lectin From Dolichos Biflorus Length 6e-12
1bjq_A253 The Dolichos Biflorus Seed Lectin In Complex With A 6e-12
1wbf_A242 Winged Bean Lectin, Saccharide Free Form Length = 2 9e-12
1wbl_A241 Winged Bean Lectin Complexed With Methyl-Alpha-D-Ga 1e-11
2bqp_A234 The Structure Of The Pea Lectin-D-Glucopyranose Com 1e-11
2e7q_A237 Crystal Structure Of Basic Winged Bean Lectin In Co 1e-11
1gsl_A243 Lectin (Fourth Isolated From (Griffonia Simplicifol 2e-11
2sba_A253 Soybean Agglutinin Complexed With 2,6-Pentasacchari 3e-11
3zvx_A261 Structure Of The Lectin From Platypodium Elegans In 4e-11
1fny_A237 Legume Lectin Of The Bark Of Robinia Pseudoacacia. 4e-11
1fay_A238 Winged Bean Acidic Lectin Complexed With Methyl-Alp 3e-10
1n47_A233 Isolectin B4 From Vicia Villosa In Complex With The 8e-10
1dbn_A239 Maackia Amurensis Leukoagglutinin (Lectin) With Sia 9e-10
1q8o_A252 Pterocartpus Angolensis Lectin Pal In Complex With 1e-09
1n3o_A252 Pterocarcpus Angolensis Lectin In Complex With Alph 1e-09
2eig_A234 Lotus Tetragonolobus Seed Lectin (Isoform) Length = 2e-09
1dhk_B223 Structure Of Porcine Pancreatic Alpha-Amylase Lengt 2e-09
2je9_A239 Crystal Structure Of Recombinant Dioclea Grandiflor 2e-09
2jec_A239 Crystal Structure Of Recombinant Dioclea Grandiflor 2e-09
2gdf_A237 Crystal Structure Of Dioclea Violacea Seed Lectin L 2e-09
1viw_B205 Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Le 2e-09
3sh3_A237 Crystal Structure Of A Pro-Inflammatory Lectin From 2e-09
1wuv_A237 Crystal Structure Of Native Canavalia Gladiata Lect 4e-09
2zbj_A237 Crystal Structure Of Dioclea Rostrata Lectin Length 5e-09
2ctv_A237 High Resolution Crystallographic Studies Of Native 6e-09
2yz4_A237 The Neutron Structure Of Concanavalin A At 2.2 Angs 6e-09
1qmo_E133 Structure Of Fril, A Legume Lectin That Delays Hema 6e-09
1cn1_A237 Crystal Structure Of Demetallized Concanavalin A. T 7e-09
2cna_A237 The Covalent And Three-Dimensional Structure Of Con 7e-09
2pel_A236 Peanut Lectin Length = 236 8e-09
1dgl_A237 Lectin From Dioclea Grandiflora Complexed To Triman 9e-09
1bzw_A232 Peanut Lectin Complexed With C-Lactose Length = 232 9e-09
2ovu_A237 Crystal Strucure Of A Lectin From Canavalia Gladiat 1e-08
1azd_A237 Concanavalin From Canavalia Brasiliensis Length = 2 2e-08
3a0k_A237 Crystal Structure Of An Antiflamatory Legume Lectin 2e-08
2ow4_A237 Crystal Structure Of A Lectin From Canavalia Mariti 2e-08
2cwm_A237 Native Crystal Structure Of No Releasing Inductive 2e-08
1gz9_A239 High-Resolution Crystal Structure Of Erythrina Cris 2e-08
3u4x_A236 Crystal Structure Of A Lectin From Camptosema Pedic 2e-08
1fx5_A242 Crystal Structure Analysis Of Ulex Europaeus Lectin 2e-08
2jdz_A239 Crystal Structure Of Recombinant Dioclea Guianensis 3e-08
2je7_A239 Crystal Structure Of Recombinant Dioclea Guianensis 3e-08
1mvq_A236 Cratylia Mollis Lectin (Isoform 1) In Complex With 3e-08
1lgc_A181 Interaction Of A Legume Lectin With The N2 Fragment 4e-08
2d3p_A236 Cratylia Floribunda Seed Lectin Crystallized At Bas 5e-08
1h9p_A237 Crystal Structure Of Dioclea Guianensis Seed Lectin 5e-08
1h9w_A237 Native Dioclea Guianensis Seed Lectin Length = 237 6e-08
3rrd_A237 Native Structure Of Dioclea Virgata Lectin Length = 6e-08
1lgb_A181 Interaction Of A Legume Lectin With The N2 Fragment 7e-08
1sfy_A239 Crystal Structure Of Recombinant Erythrina Corallod 9e-08
2b7y_A182 Fava Bean Lectin-Glucose Complex Length = 182 1e-07
3n35_A242 Erythrina Corallodendron Lectin Mutant (Y106g) With 1e-07
1lof_C181 X-Ray Structure Of A Biantennary Octasaccharide-Lec 2e-07
1lte_A239 Structure Of A Legume Lectin With An Ordered N-Link 2e-07
1loa_A181 Three-Dimensional Structures Of Complexes Of Lathyr 3e-07
2lal_A181 Crystal Structure Determination And Refinement At 2 6e-07
1ax0_A239 Erythrina Corallodendron Lectin In Complex With N-A 7e-07
1fyu_A255 Crystal Structure Of Erythrina Corallodendron Lecti 9e-07
1uzy_A242 Erythrina Crystagalli Lectin Length = 242 1e-06
1rin_A180 X-Ray Crystal Structure Of A Pea Lectin-Trimannosid 2e-06
1ofs_A187 Pea Lectin-sucrose Complex Length = 187 2e-06
2ltn_A181 Design, Expression, And Crystallization Of Recombin 2e-06
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 239 Back     alignment and structure 
Iteration: 1

 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 30/245 (12%)
Query: 38  FIYHGFN--ESKLHLEGFSNIQPNGLLQMSNSSQ------LTKGHAFYPYPLN-FNTSSP 88
           F++  F   E  L L+G + +   G+LQ++N          + G A Y  P+N +++++ 
Sbjct: 6   FVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDSNGVPEPSSLGRATYSAPINIWDSATG 65
Query: 89  QSLSFSTNFVFAMVPVN--TGGHGMAFLFSPSLDLSQALASAHLGLLNSTNNGQSTNHII 146
              SF+T+F F +   N  T   G+AF  +P      +     LGL +S   G +T   +
Sbjct: 66  LVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDS-GGGFLGLFDSAV-GDTTYQTV 123
Query: 147 AVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDEGSYISLDLQSGNPMQIWID 206
           AVE DT ++  F D   TH+G DVNS+ S  +            +   L +G   ++ I 
Sbjct: 124 AVEFDTYENTVFTDPPYTHIGFDVNSISSIKT------------VKWSLANGEAAKVLIT 171
Query: 207 YNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGILK---SNQYIL 263
           YN   +LL  +L  +  S     +L+  +DLS +L + + VGFSA+TG  K       + 
Sbjct: 172 YNSAVKLLVASL--VYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASKGYIETHDVF 229
Query: 264 GWSFS 268
            WSF+
Sbjct: 230 SWSFA 234
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 251 Back     alignment and structure
>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal Free Form Length = 257 Back     alignment and structure
>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of Griffonia Simplicifolia Lectin-1 Length = 257 Back     alignment and structure
>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia Milbraedii Seed Agglutinin Length = 240 Back     alignment and structure
>pdb|1FAT|A Chain A, Phytohemagglutinin-L Length = 252 Back     alignment and structure
>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney Bean Length = 233 Back     alignment and structure
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin Length = 256 Back     alignment and structure
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin Length = 242 Back     alignment and structure
>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L Length = 226 Back     alignment and structure
>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In Complex With Adenine And Galactose Length = 281 Back     alignment and structure
>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus Length = 242 Back     alignment and structure
>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus Length = 253 Back     alignment and structure
>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine Length = 253 Back     alignment and structure
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form Length = 242 Back     alignment and structure
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose Length = 241 Back     alignment and structure
>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex Length = 234 Back     alignment and structure
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex With B Blood Group Trisaccharide Length = 237 Back     alignment and structure
>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia)) Complex With Y Human Blood Group Determinant Length = 243 Back     alignment and structure
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide Length = 253 Back     alignment and structure
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In Complex With A Trimannoside Length = 261 Back     alignment and structure
>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia. Length = 237 Back     alignment and structure
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With Methyl-Alpha-D-Galactose (Monoclinic Form) Length = 238 Back     alignment and structure
>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn Antigen Length = 233 Back     alignment and structure
>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With Sialyllactose Length = 239 Back     alignment and structure
>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The Dimmanoside Man(Alpha1-2)man Length = 252 Back     alignment and structure
>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With Alpha-Methyl Glucose Length = 252 Back     alignment and structure
>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform) Length = 234 Back     alignment and structure
>pdb|1DHK|B Chain B, Structure Of Porcine Pancreatic Alpha-Amylase Length = 223 Back     alignment and structure
>pdb|2JE9|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora Lectin Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239 Back     alignment and structure
>pdb|2JEC|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora Lectin Mutant E123a-H131n-K132q Complexed With 5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose Length = 239 Back     alignment and structure
>pdb|2GDF|A Chain A, Crystal Structure Of Dioclea Violacea Seed Lectin Length = 237 Back     alignment and structure
>pdb|1VIW|B Chain B, Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Length = 205 Back     alignment and structure
>pdb|3SH3|A Chain A, Crystal Structure Of A Pro-Inflammatory Lectin From The Seeds Of Dioclea Wilsonii Standl Length = 237 Back     alignment and structure
>pdb|1WUV|A Chain A, Crystal Structure Of Native Canavalia Gladiata Lectin (Cgl): A Tetrameric Cona-Like Lectin Length = 237 Back     alignment and structure
>pdb|2ZBJ|A Chain A, Crystal Structure Of Dioclea Rostrata Lectin Length = 237 Back     alignment and structure
>pdb|2CTV|A Chain A, High Resolution Crystallographic Studies Of Native Concanavalin A Using Rapid Laue Data Collection Methods And The Introduction Of A Monochromatic Large-Angle Oscillation Technique (Lot) Length = 237 Back     alignment and structure
>pdb|2YZ4|A Chain A, The Neutron Structure Of Concanavalin A At 2.2 Angstroms Length = 237 Back     alignment and structure
>pdb|1QMO|E Chain E, Structure Of Fril, A Legume Lectin That Delays Hematopoietic Progenitor Maturation Length = 133 Back     alignment and structure
>pdb|1CN1|A Chain A, Crystal Structure Of Demetallized Concanavalin A. The Metal- Binding Region Length = 237 Back     alignment and structure
>pdb|2CNA|A Chain A, The Covalent And Three-Dimensional Structure Of Concanavalin A, Iv.Atomic Coordinates,Hydrogen Bonding,And Quaternary Structure Length = 237 Back     alignment and structure
>pdb|2PEL|A Chain A, Peanut Lectin Length = 236 Back     alignment and structure
>pdb|1DGL|A Chain A, Lectin From Dioclea Grandiflora Complexed To Trimannoside Length = 237 Back     alignment and structure
>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose Length = 232 Back     alignment and structure
>pdb|2OVU|A Chain A, Crystal Strucure Of A Lectin From Canavalia Gladiata (Cgl) In Complex With Man1-2man-Ome Length = 237 Back     alignment and structure
>pdb|1AZD|A Chain A, Concanavalin From Canavalia Brasiliensis Length = 237 Back     alignment and structure
>pdb|3A0K|A Chain A, Crystal Structure Of An Antiflamatory Legume Lectin From Cymbosema Roseum Seeds Length = 237 Back     alignment and structure
>pdb|2OW4|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima Seeds (Conm) In Complex With Man1-2man-Ome Length = 237 Back     alignment and structure
>pdb|2CWM|A Chain A, Native Crystal Structure Of No Releasing Inductive Lectin From Seeds Of The Canavalia Maritima (Conm) Length = 237 Back     alignment and structure
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli Lectin In Complex With 2'-Alpha-L-Fucosyllactose Length = 239 Back     alignment and structure
>pdb|3U4X|A Chain A, Crystal Structure Of A Lectin From Camptosema Pedicellatum Seeds In Complex With 5-Bromo-4-Chloro-3-Indolyl-Alpha-D-Mannose Length = 236 Back     alignment and structure
>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I Length = 242 Back     alignment and structure
>pdb|2JDZ|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239 Back     alignment and structure
>pdb|2JE7|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin S131h Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239 Back     alignment and structure
>pdb|1MVQ|A Chain A, Cratylia Mollis Lectin (Isoform 1) In Complex With Methyl-Alpha-D- Mannose Length = 236 Back     alignment and structure
>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181 Back     alignment and structure
>pdb|2D3P|A Chain A, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph Length = 236 Back     alignment and structure
>pdb|1H9P|A Chain A, Crystal Structure Of Dioclea Guianensis Seed Lectin Length = 237 Back     alignment and structure
>pdb|1H9W|A Chain A, Native Dioclea Guianensis Seed Lectin Length = 237 Back     alignment and structure
>pdb|3RRD|A Chain A, Native Structure Of Dioclea Virgata Lectin Length = 237 Back     alignment and structure
>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181 Back     alignment and structure
>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron Lectin Length = 239 Back     alignment and structure
>pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex Length = 182 Back     alignment and structure
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N- Acetylgalactosamine Length = 242 Back     alignment and structure
>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin Complex At 2.3 Angstroms Resolution Length = 181 Back     alignment and structure
>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked Carbohydrate In Complex With Lactose Length = 239 Back     alignment and structure
>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus Ochrus Isolectin I With Glucose And Mannose: Fine Specificity Of The Monosaccharide-Binding Site Length = 181 Back     alignment and structure
>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3 Angstroms Resolution Of The Lentil Lectin Length = 181 Back     alignment and structure
>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With N-Actylgalactosamine Length = 239 Back     alignment and structure
>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In Hexagonal Crystal Form Length = 255 Back     alignment and structure
>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin Length = 242 Back     alignment and structure
>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside Complex At 2.6 Angstroms Resolution Length = 180 Back     alignment and structure
>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex Length = 187 Back     alignment and structure
>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant Lectin From The Garden Pea (Pisum Sativum) Length = 181 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query299
3ipv_A251 Lectin alpha chain; galactose binding, SEED lectin 5e-55
1v6i_A232 Agglutinin, PNA, galactose-binding lectin; open qu 8e-55
2eig_A234 Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin 1e-54
1hql_A257 Lectin; xenograft antigen, sugar BI protein; HET: 3e-54
2fmd_A240 Lectin, agglutinin, BMA; legume lectin, beta sandw 7e-53
1fat_A252 Phytohemagglutinin-L; glycoprotein, plant defense 2e-52
1fny_A237 BARK lectin, BARK agglutinin I,polypeptide A; legu 1e-51
1gsl_A243 Griffonia simplicifolia lectin 4; glycoprotein, ma 4e-51
3zyr_A261 Lectin; sugar binding protein, N-glycan; HET: NAG 2e-50
1fx5_A242 UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO 7e-50
1sbf_A253 Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G 1e-49
1wbf_A242 Protein (agglutinin); lectin (agglutinin), legume 4e-49
2bqp_A234 Protein (PEA lectin); D-glucopyranose complex, sug 8e-49
1qnw_A242 Chitin binding lectin, UEA-II; carbohydrate bindin 1e-48
1g7y_A253 Stem/LEAF lectin DB58; jelly roll fold, sugar bind 1e-48
1gzc_A239 Erythrina crista-galli lectin; carbohydrate, sugar 7e-48
1n47_A233 Isolectin B4; cancer antigen, vicia villosa lectin 1e-47
1avb_A226 Arcelin-1; lectin-like glycoprotein, plant defense 1e-47
1f9k_A238 Acidic lectin; legume lectin, glycosylated protein 5e-46
1dbn_A239 MAL, protein (leukoagglutinin); plant lectin, carb 4e-45
1ioa_A240 Arcelin-5A, ARC5A; lectin-like proteins, plant def 4e-45
1dhk_B223 Bean lectin-like inhibitor, porcine pancreatic alp 1e-44
2ltn_A181 PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO 5e-38
1qmo_E133 Mannose binding lectin, FRIL; crosslink, hematopoi 9e-34
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 6e-30
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 8e-14
1qmo_A113 Mannose binding lectin, FRIL; crosslink, hematopoi 1e-16
1gv9_A260 P58/ergic-53; lectin, carbohydrate binding; 1.46A 2e-09
2ltn_B52 PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP 2e-08
2dur_A253 VIP36;, vesicular integral-membrane protein VIP36; 1e-07
>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Length = 251 Back     alignment and structure
 Score =  178 bits (451), Expect = 5e-55
 Identities = 72/258 (27%), Positives = 115/258 (44%), Gaps = 30/258 (11%)

Query: 38  FIYHGF--NESKLHLEGFSNIQPNGLLQMSNSSQ------LTKGHAFYPYPLNF-NTSSP 88
           F++  F   E  L L+G + +   G+LQ++N  +       + G A Y  P+N  ++++ 
Sbjct: 6   FVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWDSATG 65

Query: 89  QSLSFSTNFVFAMVPVNT--GGHGMAFLFSPSLDLSQALASAHLGLLNSTNNGQSTNHII 146
              SF+T+F F +   N      G+AF  +P      +     LGL +S  +G ST   +
Sbjct: 66  LVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDS-GGGFLGLFDSAVSG-STYQTV 123

Query: 147 AVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDEGSYISLDLQSGNPMQIWID 206
           AVE DT ++  F D   TH+G DVNS+ S  +                L +G   ++ I 
Sbjct: 124 AVEFDTYENTVFTDPPYTHIGFDVNSISSIKTVK------------WSLANGEAAKVLIT 171

Query: 207 YNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGILK---SNQYIL 263
           YN   +LL  +L     S     +L+  +DLS +L + + VGFSA+TG          + 
Sbjct: 172 YNSAVKLLVASLVY--PSSKTSFILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVF 229

Query: 264 GWSFSRSAEAQNLDISKL 281
            WSF+          S  
Sbjct: 230 SWSFASKLAGXXTKDSSF 247
>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Length = 232 Back     alignment and structure
>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Length = 234 Back     alignment and structure
>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Length = 257 Back     alignment and structure
>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Length = 240 Back     alignment and structure
>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Length = 252 Back     alignment and structure
>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Length = 237 Back     alignment and structure
>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Length = 243 Back     alignment and structure
>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Length = 261 Back     alignment and structure
>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Length = 242 Back     alignment and structure
>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Length = 253 Back     alignment and structure
>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Length = 242 Back     alignment and structure
>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Length = 234 Back     alignment and structure
>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Length = 242 Back     alignment and structure
>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Length = 253 Back     alignment and structure
>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Length = 239 Back     alignment and structure
>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Length = 233 Back     alignment and structure
>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 226 Back     alignment and structure
>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Length = 238 Back     alignment and structure
>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Length = 239 Back     alignment and structure
>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 240 Back     alignment and structure
>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Length = 223 Back     alignment and structure
>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Length = 181 Back     alignment and structure
>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 133 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237 Back     alignment and structure
>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 113 Back     alignment and structure
>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Length = 260 Back     alignment and structure
>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Length = 52 Back     alignment and structure
>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Length = 253 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query299
3ujo_A281 Legume lectin; carbohydrate-binding, galactose, ad 100.0
1hql_A257 Lectin; xenograft antigen, sugar BI protein; HET: 100.0
3ipv_A251 Lectin alpha chain; galactose binding, SEED lectin 100.0
3zyr_A261 Lectin; sugar binding protein, N-glycan; HET: NAG 100.0
1dbn_A239 MAL, protein (leukoagglutinin); plant lectin, carb 100.0
2bqp_A234 Protein (PEA lectin); D-glucopyranose complex, sug 100.0
2fmd_A240 Lectin, agglutinin, BMA; legume lectin, beta sandw 100.0
1fny_A237 BARK lectin, BARK agglutinin I,polypeptide A; legu 100.0
1v6i_A232 Agglutinin, PNA, galactose-binding lectin; open qu 100.0
1fx5_A242 UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO 100.0
1qnw_A242 Chitin binding lectin, UEA-II; carbohydrate bindin 100.0
1g7y_A253 Stem/LEAF lectin DB58; jelly roll fold, sugar bind 100.0
2eig_A234 Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin 100.0
1gzc_A239 Erythrina crista-galli lectin; carbohydrate, sugar 100.0
1sbf_A253 Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G 100.0
1n47_A233 Isolectin B4; cancer antigen, vicia villosa lectin 100.0
1fat_A252 Phytohemagglutinin-L; glycoprotein, plant defense 100.0
1gsl_A243 Griffonia simplicifolia lectin 4; glycoprotein, ma 100.0
1f9k_A238 Acidic lectin; legume lectin, glycosylated protein 100.0
1wbf_A242 Protein (agglutinin); lectin (agglutinin), legume 100.0
1avb_A226 Arcelin-1; lectin-like glycoprotein, plant defense 100.0
1ioa_A240 Arcelin-5A, ARC5A; lectin-like proteins, plant def 100.0
1dhk_B223 Bean lectin-like inhibitor, porcine pancreatic alp 100.0
2ltn_A181 PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO 100.0
1gv9_A260 P58/ergic-53; lectin, carbohydrate binding; 1.46A 100.0
2dur_A253 VIP36;, vesicular integral-membrane protein VIP36; 100.0
1qmo_E133 Mannose binding lectin, FRIL; crosslink, hematopoi 100.0
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 99.97
2a6y_A256 EMP47P (FORM1); beta sandwich, carbohydrate bindin 99.97
2a6z_A222 EMP47P (FORM2); beta sandwich, carbohydrate bindin 99.93
1qmo_A113 Mannose binding lectin, FRIL; crosslink, hematopoi 99.93
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 99.88
2a6v_A226 EMP46P; beta sandwich, carbohydrate binding protei 99.88
2ltn_B52 PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP 99.49
>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-61  Score=444.67  Aligned_cols=233  Identities=29%  Similarity=0.475  Sum_probs=202.0

Q ss_pred             HHHHHhhhcccceeEEeCCCCCCCcEEecceEEcCCCeEEecCCCCC------eEEEEEeCCCeeecC-CCCCccceEEE
Q 047725           24 LHLTILGIIQRLQGFIYHGFNESKLHLEGFSNIQPNGLLQMSNSSQL------TKGHAFYPYPLNFNT-SSPQSLSFSTN   96 (299)
Q Consensus        24 ~~l~~~~~~~~~~~F~f~~F~~~~l~l~GdA~v~~~g~l~LT~~~~~------~~G~v~y~~Pi~l~d-~s~~~~sF~t~   96 (299)
                      |.|+..+..+..++|+|+.|+.++|+++|||.+. +|.||||+++.+      ++|||+|++||+||| .+++++||+|+
T Consensus        15 l~l~~~~~sa~~~sF~f~~F~~~nL~l~GdA~i~-~g~L~LT~~~~~~~p~~~s~Gra~Y~~Pi~l~d~~tg~vaSFsTs   93 (281)
T 3ujo_A           15 LILLTKAASANLISFTFKKFNETNLILQRDATVS-SGKLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGTVASWATS   93 (281)
T ss_dssp             ---------CEEEEEEESSCCSTTEEECSSCCCB-TTBEECSCCCSSCCCCSSCEEEEEESSCEECBCSSSCCBEEEEEE
T ss_pred             HHHHcccCcCCcceEEcCCCCccCEEEecceEEe-CCEEEeCCCCCCCcccCCceEEEEECCCEEcccCCCCCceeEEEE
Confidence            3333444456789999999999999999999986 999999998765      999999999999999 88999999999


Q ss_pred             EEEEEeec--CCCCcceEEEEccCCCCCccCCCccccCCCCCCCCCCCCcEEEEEEecccccccCCCCCCeEEEecCCCc
Q 047725           97 FVFAMVPV--NTGGHGMAFLFSPSLDLSQALASAHLGLLNSTNNGQSTNHIIAVELDTVQSVEFKDLNGTHVGIDVNSLI  174 (299)
Q Consensus        97 F~F~I~~~--~~~gDGlAF~l~~~~~~~~~~~G~~lGl~~~~~~g~~~~~~vAVEFDT~~n~~~~Dp~~~HVgIdvn~~~  174 (299)
                      |+|.|.++  ..+||||||+|+|.+..|. ..||+|||++.+++ +..++.|||||||++|.++ ||+++|||||+|++.
T Consensus        94 FsF~I~~~~~~~~gdGlAF~laP~~~~p~-~~gg~LGL~n~~~~-~~~n~~vAVEFDT~~N~e~-Dp~~nHVGIDvNSi~  170 (281)
T 3ujo_A           94 FTFNLQAPNAASPADGLAFALVPVGSQPK-DKGGFLGLFDSKNY-ASSNQTVAVEFDTFYNGGW-DPTERHIGIDVNSIK  170 (281)
T ss_dssp             EEEECCCSSTTSCCEEEEEEEEETTCCCC-CCGGGTTTCSCSSC-CTTSCCEEEEECCSCCCSS-CCSSSEEEEEESSSC
T ss_pred             EEEEEecCCCCCCCCceEEEEecCCCCCC-CCcceeeeccccCC-CccCcEEEEEEeccccccC-CCCCCeEEEEcCCCC
Confidence            99999876  6689999999999876554 67999999988655 5678999999999999887 999999999999998


Q ss_pred             ccCCccCccccCCCceeeeecCCCCcEEEEEEeeCCCcEEEEEEeecCCCCCCcceEEEeecCCcCCCCeeEEEEEeecC
Q 047725          175 SNDSAPAAYFSDEGSYISLDLQSGNPMQIWIDYNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTG  254 (299)
Q Consensus       175 s~~t~~~~~~~~~G~~~~~~l~~G~~~~v~I~Y~~~~~~L~V~l~~~~~~~p~~~~ls~~vdL~~~l~~~vyvGFSAsTG  254 (299)
                      |.++.+|            ++.+|+.++|||+||+.+++|+|++.+.+.  |++|++++.|||+++||++|||||||+||
T Consensus       171 S~~t~~~------------~l~~G~~~~vwI~Yd~~tk~L~V~l~~~~~--~~~~~lS~~vDL~~~L~e~v~VGFSAsTG  236 (281)
T 3ujo_A          171 SIKTTSW------------DFANGENAEVLITYDSSTNLLVASLVHPSQ--KTSFIVSERVDLTSVLPEWVSVGFSATTG  236 (281)
T ss_dssp             CSCEEEC------------CCCSSCCEEEEEEECTTTCEEEEEEECTTT--CCCEEEEEECCSTTTSCSEEEEEEEEEEC
T ss_pred             ccccccc------------cccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCCceEEEEechHHhccCcEEEEEEeecC
Confidence            8776554            466899999999999999999999998663  55789999999999999999999999999


Q ss_pred             C---ceeceEEEEEEEEeccccC
Q 047725          255 I---LKSNQYILGWSFSRSAEAQ  274 (299)
Q Consensus       255 ~---~~~~h~I~sWsF~s~~~~~  274 (299)
                      .   ..|.|+|++|+|+++.+..
T Consensus       237 ~~~~~~e~H~IlsWSFss~l~~~  259 (281)
T 3ujo_A          237 LSKGYVETNEVLSWSFASKLSIN  259 (281)
T ss_dssp             SSTTSCCCCEEEEEEEEEEECSS
T ss_pred             CCCcccceeEEEEEEEEEEcCCC
Confidence            6   6899999999999998643
>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Back     alignment and structure
>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Back     alignment and structure
>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Back     alignment and structure
>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Back     alignment and structure
>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Back     alignment and structure
>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Back     alignment and structure
>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Back     alignment and structure
>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Back     alignment and structure
>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Back     alignment and structure
>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Back     alignment and structure
>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Back     alignment and structure
>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Back     alignment and structure
>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Back     alignment and structure
>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Back     alignment and structure
>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Back     alignment and structure
>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Back     alignment and structure
>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Back     alignment and structure
>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Back     alignment and structure
>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Back     alignment and structure
>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Back     alignment and structure
>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Back     alignment and structure
>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Back     alignment and structure
>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Back     alignment and structure
>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Back     alignment and structure
>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Back     alignment and structure
>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Back     alignment and structure
>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13 Back     alignment and structure
>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A Back     alignment and structure
>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Back     alignment and structure
>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A Back     alignment and structure
>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 299
d1hqla_236 b.29.1.1 (A:) Legume lectin {Griffonia simplicifol 9e-56
d1qnwa_237 b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus 1e-55
d1leda_243 b.29.1.1 (A:) Legume lectin {West-central african 2e-53
d1gzca_239 b.29.1.1 (A:) Legume lectin {Cockspur coral tree ( 2e-53
d1fx5a_240 b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus 3e-52
d1g9fa_251 b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) 4e-52
d1f9ka_234 b.29.1.1 (A:) Legume lectin {Winged bean (Psophoca 7e-52
d1g8wa_233 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 1e-51
d1v6ia_232 b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog 6e-51
d1g7ya_253 b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos 2e-50
d2d3sa1237 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Pso 7e-50
d1avba_226 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 8e-50
g1qmo.1230 b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich 8e-50
d1ukga_241 b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero 6e-49
d1dbna_239 b.29.1.1 (A:) Legume lectin {Maackia amurensis, le 2e-47
d1n47a_233 b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi 5e-47
d1fnya_237 b.29.1.1 (A:) Legume lectin {Black locust (Robinia 1e-46
g2ltn.1229 b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum 3e-46
d1ioaa_228 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 8e-43
d1dhkb_204 b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar 3e-41
d1nlsa_237 b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia 2e-36
d1nlsa_237 b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia 3e-20
d1gv9a_228 b.29.1.13 (A:) Carbohydrate-recognition domain of 3e-20
d2a6za1221 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Bake 9e-05
d2a6va1218 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Bake 5e-04
>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Length = 236 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

 Score =  178 bits (452), Expect = 9e-56
 Identities = 72/246 (29%), Positives = 110/246 (44%), Gaps = 27/246 (10%)

Query: 38  FIYHGFN---ESKLHLEGFSNIQPNGLLQMSNSSQLTK------GHAFYPYPLNF-NTSS 87
           F +  F    E  +  +G +N    G LQ+  ++Q         G A Y  P+   +  +
Sbjct: 4   FTFPNFWSDVEDSIIFQGDANT-TAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKT 62

Query: 88  PQSLSFSTNFVFAMVPV-NTGGHGMAFLFSPSLDLSQALASAHLGLL-NSTNNGQSTNHI 145
               SF T F F +    N    G+AF  +P  D     A  +LGL   ST    S N +
Sbjct: 63  ESVASFYTEFTFFLKITGNGPADGLAFFLAPP-DSDVKDAGEYLGLFNKSTATQPSKNQV 121

Query: 146 IAVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAAYFSDEGSYISLDLQSGNPMQIWI 205
           +AVE DT  +  F + +  H+GI+VNS++S  +           +   D+ SG      I
Sbjct: 122 VAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKR---------WEDSDIFSGKIATARI 172

Query: 206 DYNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGILKS-NQYILG 264
            Y+G   +L V L+       +  +LS  +D+ Q L +++ VG SASTG  +    YIL 
Sbjct: 173 SYDGSAEILTVVLSY---PDGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILS 229

Query: 265 WSFSRS 270
           W FS +
Sbjct: 230 WRFSSN 235
>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Length = 237 Back     information, alignment and structure
>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Length = 243 Back     information, alignment and structure
>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Length = 239 Back     information, alignment and structure
>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Length = 240 Back     information, alignment and structure
>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251 Back     information, alignment and structure
>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Length = 234 Back     information, alignment and structure
>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233 Back     information, alignment and structure
>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232 Back     information, alignment and structure
>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253 Back     information, alignment and structure
>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Length = 237 Back     information, alignment and structure
>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226 Back     information, alignment and structure
>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241 Back     information, alignment and structure
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239 Back     information, alignment and structure
>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233 Back     information, alignment and structure
>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237 Back     information, alignment and structure
>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228 Back     information, alignment and structure
>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204 Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237 Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237 Back     information, alignment and structure
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228 Back     information, alignment and structure
>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221 Back     information, alignment and structure
>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query299
d1hqla_236 Legume lectin {Griffonia simplicifolia, lectin I-b 100.0
d1leda_243 Legume lectin {West-central african legume (Griffo 100.0
d1fx5a_240 Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI 100.0
d1qnwa_237 Legume lectin {Furze (Ulex europaeus), UEA-II [Tax 100.0
d1gzca_239 Legume lectin {Cockspur coral tree (Erythrina cris 100.0
d1g9fa_251 Legume lectin {Soybean (Glycine max) [TaxId: 3847] 100.0
d2d3sa1237 Legume lectin {Winged bean (Psophocarpus tetragono 100.0
d1g8wa_233 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1g7ya_253 Legume lectin {Horse gram (Dolichos biflorus), dif 100.0
g1qmo.1230 Legume lectin {Field bean (Dolichos lablab), Fril 100.0
d1dbna_239 Legume lectin {Maackia amurensis, leukoagglutinin 100.0
d1v6ia_232 Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3 100.0
d1fnya_237 Legume lectin {Black locust (Robinia pseudoacacia) 100.0
d1f9ka_234 Legume lectin {Winged bean (Psophocarpus tetragono 100.0
d1n47a_233 Legume lectin {Hairy vetch (Vicia villosa), isolec 100.0
g2ltn.1229 Legume lectin {Garden pea (Pisum sativum) [TaxId: 100.0
d1ukga_241 Legume lectin {Bloodwood tree (Pterocarpus angolen 100.0
d1avba_226 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1ioaa_228 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1dhkb_204 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1gv9a_228 Carbohydrate-recognition domain of P58/ERGIC-53 {R 100.0
d1nlsa_237 Concanavalin A {Jack bean (Canavalia ensiformis) [ 99.97
d2a6za1221 Emp47p N-terminal domain {Baker's yeast (Saccharom 99.95
d2a6va1218 Emp46p N-terminal domain {Baker's yeast (Saccharom 99.95
d1nlsa_237 Concanavalin A {Jack bean (Canavalia ensiformis) [ 99.88
>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

Probab=100.00  E-value=6.3e-56  Score=397.60  Aligned_cols=223  Identities=31%  Similarity=0.476  Sum_probs=194.8

Q ss_pred             ceeEEeCCCCC---CCcEEecceEEcCCCeEEecCCC------CCeEEEEEeCCCeeecC-CCCCccceEEEEEEEEeec
Q 047725           35 LQGFIYHGFNE---SKLHLEGFSNIQPNGLLQMSNSS------QLTKGHAFYPYPLNFNT-SSPQSLSFSTNFVFAMVPV  104 (299)
Q Consensus        35 ~~~F~f~~F~~---~~l~l~GdA~v~~~g~l~LT~~~------~~~~G~v~y~~Pi~l~d-~s~~~~sF~t~F~F~I~~~  104 (299)
                      +++|+|++|..   ++|+|+|||.+. +|.|+||++.      +.++|||+|++||+||+ .+++++||+|+|+|+|...
T Consensus         1 ~~sF~f~~F~~~~~~~l~l~G~A~~~-~~~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~~t~~~asFsT~F~F~i~~~   79 (236)
T d1hqla_           1 SVSFTFPNFWSDVEDSIIFQGDANTT-AGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFLKIT   79 (236)
T ss_dssp             CCEEEESCSCSCGGGTEEEEETCEEE-TTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTCCCCEEEEEEEEEEEEC
T ss_pred             CEEEEeCCCCCCCcCCEEEeccEEec-CCEEEEecCCCCCcccccceEEEEECCCEEeecCCCCceeEEEEEEEEEEeCC
Confidence            46899999973   679999999984 8999999864      45799999999999999 8899999999999999877


Q ss_pred             -CCCCcceEEEEccCCCCCccCCCccccCCCCCCCCC-CCCcEEEEEEecccccccCCCCCCeEEEecCCCcccCCccCc
Q 047725          105 -NTGGHGMAFLFSPSLDLSQALASAHLGLLNSTNNGQ-STNHIIAVELDTVQSVEFKDLNGTHVGIDVNSLISNDSAPAA  182 (299)
Q Consensus       105 -~~~gDGlAF~l~~~~~~~~~~~G~~lGl~~~~~~g~-~~~~~vAVEFDT~~n~~~~Dp~~~HVgIdvn~~~s~~t~~~~  182 (299)
                       ..+||||||+|+|... +.+..|++||+++..+.+. ..++.||||||||+|.+++||+++|||||+|++.+..+.++.
T Consensus        80 ~~~~gDGlAFvl~p~~~-~~~~~G~~lGl~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~nHIgIdvns~~s~~~~~~~  158 (236)
T d1hqla_          80 GNGPADGLAFFLAPPDS-DVKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRWE  158 (236)
T ss_dssp             SSCCCCEEEEEEECTTC-CCCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCSSSCCCSSCEEEEEESSSSCSEEEECC
T ss_pred             CCCCCceEEEEEeCCCC-CCCCCccccccccccccCCcccCceEEEEeeCccCCCCCCCCCCEEEEEcCCcccccccccc
Confidence             7789999999999754 3456899999998755433 457899999999999988999999999999998876654432


Q ss_pred             cccCCCceeeeecCCCCcEEEEEEeeCCCcEEEEEEeecCCCCCCcceEEEeecCCcCCCCeeEEEEEeecCCc-eeceE
Q 047725          183 YFSDEGSYISLDLQSGNPMQIWIDYNGEERLLNVTLAPIRVSKPNRPLLSTPLDLSQILLDTMYVGFSASTGIL-KSNQY  261 (299)
Q Consensus       183 ~~~~~G~~~~~~l~~G~~~~v~I~Y~~~~~~L~V~l~~~~~~~p~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~-~~~h~  261 (299)
                               ..++++|+.++|||+||+.+|+|+|+|++.   ++.+|++++.|||+++|+++|||||||+||+. .+.|+
T Consensus       159 ---------~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~---~~~~~~ls~~vdL~~~l~~~v~vGFSasTG~~~~~~h~  226 (236)
T d1hqla_         159 ---------DSDIFSGKIATARISYDGSAEILTVVLSYP---DGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVY  226 (236)
T ss_dssp             ---------HHHHTSCSCEEEEEEEETTTTEEEEEEEET---TTEEEEEEEECCGGGTSCSEEEEEEEEECCSCCCEEEE
T ss_pred             ---------cccccCCCEEEEEEEEeCCCcEEEEEEecC---CCCCeeEEEEeCHHHhCCCcEEEEEEeECCCCCceEEE
Confidence                     357899999999999999999999999874   46788999999999999999999999999975 67899


Q ss_pred             EEEEEEEecc
Q 047725          262 ILGWSFSRSA  271 (299)
Q Consensus       262 I~sWsF~s~~  271 (299)
                      |++|+|++++
T Consensus       227 I~sWsF~s~l  236 (236)
T d1hqla_         227 ILSWRFSSNL  236 (236)
T ss_dssp             EEEEEEEEEC
T ss_pred             EEEeEeEecC
Confidence            9999999863
>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Back     information, alignment and structure
>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Back     information, alignment and structure
>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Back     information, alignment and structure
>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Back     information, alignment and structure
>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Back     information, alignment and structure
>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Back     information, alignment and structure
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Back     information, alignment and structure
>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Back     information, alignment and structure
>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Back     information, alignment and structure
>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Back     information, alignment and structure
>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Back     information, alignment and structure
>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Back     information, alignment and structure
>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Back     information, alignment and structure
>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Back     information, alignment and structure