Citrus Sinensis ID: 047746

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------
Protein Sequence
MLPPNSNLELENDSEVSSHVASNISAKEASPGPSKDTNSSCLTNVIKLNPDPGPLSLDLTLHFKSNDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAAMPPPPRTDSSAPDLTLKL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccccEEEccccccEEEEEEEccccccccccccccccccccccccccccccccEEEEccccccccccHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHcccccccccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccEEcc
Coil and Loop (DISEMBL)
mlppnsnlelendsevSSHVAsnisakeaspgpskdtnsscltnviklnpdpgplsldltlhfksndidrlkgtgetsgevaaaqtpaatvprvfscnycrrkfyssqalgghqnaHKRERTMAKRAMRMGIFsdrytslaslplhgsafRSLGIKAHAAmhqgvvppqrppdmrggarfeqgyfampmfmedddidlfwpgsfrqvseavrgnptldfaqgsngnfaampppprtdssapdltlkl
Flexible Loop (DISEMBL)
mlppnsnlelendsEVSSHVASNisakeaspgpskdtnSSCLTNVIKLNPDPGPLSLDLTLHFKSNDIDRLKGTGETSGEvaaaqtpaatvprVFSCNYCRRKFyssqalgghqnahKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQgvvppqrppdMRGGARFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSngnfaampppprtdssapdltlkl
Low Complexity Region (SEG)
MLPPNSNLELENDSEVSSHVASNISAKEASPGPSKDTNSSCLTNVIKLNPDPGPLSLDLTLHFKSNDIDRLKGTGETSGEvaaaqtpaatvpRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAAMPPPPRTDSSAPDLTLKL
Disordered region (IsUnstruct)
*******************************************NVIKL*******SLDLTLHFK**********************PAATVPRVFSCNYCRRKFYSSQAL******************RMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAM*****************RFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEA*************************************
Disordered Region (DISOPRED)
**********************************************************************************************FSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPL************************************QGYFAMPM*M*************************************************PDLTLKL
Disordered Region (DISEMBL)
**************************************SSCLTNVIKLNPDPGPLSLDLTLHFKSNDIDRLKGTGE***********AATVPRVFSCNYCRRKFYSSQA*************MAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAAMPP***************
Disordered Region (DISPRO)
****************************************CLTNVIKLNPDPGPLSLDLTLHFKS*************************VPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQGYFAMPMFMEDDDIDLFWPGSFRQV**********************************D*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLPPNSNLELENDSEVSSHVASNISAKEASPGPSKDTNSSCLTNVIKLNPDPGPLSLDLTLHFKSNDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAAMPPPPRTDSSAPDLTLKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	247	2.2.26 [Sep-21-2011]
Q39263	260	Zinc finger protein 4 OS=	yes	no	0.627	0.596	0.5	3e-38
Q39266	209	Zinc finger protein 7 OS=	no	no	0.684	0.808	0.450	9e-31
Q42485	228	Zinc finger protein 1 OS=	no	no	0.291	0.315	0.573	2e-20
Q39262	235	Zinc finger protein 3 OS=	no	no	0.408	0.429	0.453	9e-19
Q39261	150	Zinc finger protein 2 OS=	no	no	0.157	0.26	0.794	7e-13
Q9FFX4	161	Zinc finger protein KNUCK	no	no	0.165	0.254	0.627	1e-09
Q39265	197	Zinc finger protein 6 OS=	no	no	0.153	0.192	0.605	1e-07
Q9LHS9	226	Probable transcriptional	no	no	0.141	0.154	0.542	2e-05
Q38895	204	Transcriptional regulator	no	no	0.121	0.147	0.566	3e-05

>sp|Q39263|ZFP4_ARATH Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2

 Score =  158 bits (400), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/178 (50%), Positives = 111/178 (62%), Gaps = 23/178 (12%)

Query: 93  RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRM---GIFSDRYTS---------- 139
           RVFSCNYC+RKFYSSQALGGHQNAHKRERT+AKRAMRM   G+F  R +S          
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 140 -LASLPLHGS------AFRSLGIKAHAAMHQGVVPPQRPPDM-RGGARFEQGYF--AMPM 189
            L+ LPLHGS      +FR+LGI+AH++ H   +  Q P  + R  ARF QGYF   +P 
Sbjct: 143 ALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNCIPF 202

Query: 190 FMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAAMPPPPRTDSSAPDLTLKL 247
           ++EDD+ ++ WPGSFRQ + AV      D       +F  +      +SS PDLTLKL
Sbjct: 203 YVEDDEAEMLWPGSFRQATNAVAVEAGNDNLGERKMDFLDVKQAMDMESSLPDLTLKL 260

Arabidopsis thaliana (taxid: 3702)

>sp|Q39266|ZFP7_ARATH Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1

 Score =  134 bits (336), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 115/211 (54%), Gaps = 42/211 (19%)

Query: 50  PDPGPLSLDLTLHFKSNDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQA 109
           P+   +SLDL L+   ND  +               T     PRVFSCNYCRRKFYSSQA
Sbjct: 28  PESNHVSLDLKLNDTFNDDTK--------------STKCEANPRVFSCNYCRRKFYSSQA 73

Query: 110 LGGHQNAHKRERTMAKRAMRMG-IFSDR---YTSLASLPLHGSAFRSLGIKAHAA-MHQG 164
           LGGHQNAHKRERTMAKRAM MG +F      YT  +S         SLG++AH+  +H  
Sbjct: 74  LGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSS---------SLGMQAHSGLLHHT 124

Query: 165 VVPPQRPPDMRGGARF-EQGYFA--MPMFMEDDD--IDLFWPGSFRQVSEAVRGNPTLDF 219
           +  PQ  P +   +RF  QGYF   +P+F + DD   D FWPGSFRQV E     P +  
Sbjct: 125 LSQPQ--PLV---SRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVEEAEA-PVVVV 178

Query: 220 AQGSNG---NFAAMPPPPRTDSSAPDLTLKL 247
           A   +G   N  A       +SS PDLTL+L
Sbjct: 179 ASTESGLDLNSVAANGGVDNNSSKPDLTLRL 209

Arabidopsis thaliana (taxid: 3702)

>sp|Q42485|ZFP1_ARATH Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1

 Score = 99.4 bits (246), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 17/89 (19%)

Query: 92  PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAM--RMGIFS-------------DR 136
           PRVFSCNYC+RKFYSSQALGGHQNAHKRERT+AKR    +M + S              R
Sbjct: 65  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSR 124

Query: 137 YTSLASLPLHGSAFR--SLGIKAHAAMHQ 163
           + S+ASLPLHGS     +LGI+AH+ +H+
Sbjct: 125 FASMASLPLHGSVNNRSTLGIQAHSTIHK 153

Arabidopsis thaliana (taxid: 3702)

>sp|Q39262|ZFP3_ARATH Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 7/108 (6%)

Query: 61  LHFKSNDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAHKRE 120
           +H  S++++ +    +T+  V  + T  +T  ++FSCNYC+R FYSSQALGGHQNAHKRE
Sbjct: 29  VHNSSHELNLIDCIDDTTSIVNESTT--STEQKLFSCNYCQRTFYSSQALGGHQNAHKRE 86

Query: 121 RTMAKRAMRMGIFSDRY---TSLASLPLHG--SAFRSLGIKAHAAMHQ 163
           RT+AKR  RM   +  +      + LP HG  +  RSLGI+AH+  H+
Sbjct: 87  RTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHK 134

Arabidopsis thaliana (taxid: 3702)

>sp|Q39261|ZFP2_ARATH Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1

 Score = 74.3 bits (181), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 36/39 (92%)

Query: 92  PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRM 130
           PRVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++  +
Sbjct: 49  PRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREL 87

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 34/43 (79%), Gaps = 2/43 (4%)

Query: 93  RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSD 135
           R+F C YC RKFY+SQALGGHQNAHKRER  A+R   +G+ ++
Sbjct: 36  RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR--NLGVLAN 76

May function as a transcriptional repressor of cellular proliferation that regulates floral determinacy and relative size of basal pattern elements along the proximo-distal axis of the developing gynoecium.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39265|ZFP6_ARATH Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 29/38 (76%)

Query: 93  RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRM 130
           R + C YC R+F +SQALGGHQNAHK+ER + KRA  +
Sbjct: 39  RKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQML 76

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2

 Score = 49.7 bits (117), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 27/35 (77%)

Query: 92  PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR 126
           PR +SC++C R+F S+QALGGH N H+R+R   K+
Sbjct: 52  PRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQ 86

Probable transcriptional regulator essential for petal development. Required for the early development of the organ primordia of the second whorl. Acts downstream of AP1 and PTL.

Arabidopsis thaliana (taxid: 3702)

>sp|Q38895|SUP_ARATH Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1

 Score = 48.9 bits (115), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 26/30 (86%)

Query: 92  PRVFSCNYCRRKFYSSQALGGHQNAHKRER 121
           PR ++C++C+R+F S+QALGGH N H+R+R
Sbjct: 44  PRSYTCSFCKREFRSAQALGGHMNVHRRDR 73

Probable transcriptional regulator considered as cadastral protein that acts indirectly to prevent the B class homeotic proteins APETALA3 and perhaps PISTILLATA from acting in the gynoecial whorl. Principal function is to balance cell proliferation in the third and fourth whorls of developing flowers thereby maintaining the boundary between stamens and carpels. May fulfill this role by repressing genes implicated in cell division. Plays equally a role in the determinacy of the floral meristem. Is also required for normal ovule development.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	247
224111408	247	predicted protein [Populus trichocarpa]	0.991	0.991	0.722	4e-97
224099591	247	predicted protein [Populus trichocarpa]	0.991	0.991	0.726	5e-97
255573226	249	zinc finger protein, putative [Ricinus c	0.995	0.987	0.688	4e-91
225424442	246	PREDICTED: zinc finger protein 4-like [V	0.987	0.991	0.686	2e-88
302398679	255	C2H2L domain class transcription factor	0.898	0.870	0.649	4e-74
359806312	257	uncharacterized protein LOC100794851 [Gl	0.991	0.953	0.550	1e-71
359806011	251	uncharacterized protein LOC100791723 [Gl	0.987	0.972	0.598	1e-71
356501009	257	PREDICTED: zinc finger protein 4-like is	0.991	0.953	0.554	8e-71
356521175	248	PREDICTED: zinc finger protein 7-like [G	0.975	0.971	0.578	1e-70
255585705	256	zinc finger protein, putative [Ricinus c	0.987	0.953	0.565	8e-70

>gi|224111408|ref|XP_002315844.1| predicted protein [Populus trichocarpa] gi|222864884|gb|EEF02015.1| predicted protein [Populus trichocarpa]

 Score =  360 bits (923), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 180/249 (72%), Positives = 202/249 (81%), Gaps = 4/249 (1%)

Query: 1   MLPPNSNLELENDSEVSSHVASNISAKEASPGPSKD--TNSSCLTNVIKLNPDPGPLSLD 58
           M+PP SNL+ ENDSEVSS VASN+     SP PSK+  T SS LT++IK+  +P P+SLD
Sbjct: 1   MIPPKSNLDFENDSEVSSQVASNLPMHAPSPDPSKESTTPSSSLTDLIKIQENPVPVSLD 60

Query: 59  LTLHFKSNDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAHK 118
           L+LHF S++I+ LKGTGETS EVAA   P  T+PRVFSCNYCRRKFYSSQALGGHQNAHK
Sbjct: 61  LSLHFNSSEIE-LKGTGETSSEVAA-HAPNTTIPRVFSCNYCRRKFYSSQALGGHQNAHK 118

Query: 119 RERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRPPDMRGGA 178
           RERTMAKRAMRMGI SDRYTSLASLPLHGSAFRSLGIKAHAAMHQ ++  Q P + RGGA
Sbjct: 119 RERTMAKRAMRMGILSDRYTSLASLPLHGSAFRSLGIKAHAAMHQSLIQSQTPANTRGGA 178

Query: 179 RFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAAMPPPPRTDS 238
           RF QGY+ MPMFME+DD+  +WPGSFRQV E V GN  L+FAQ  N NF A  PP RTDS
Sbjct: 179 RFGQGYYGMPMFMEEDDVGSYWPGSFRQVDEDVGGNSGLEFAQSPNMNFEARAPPSRTDS 238

Query: 239 SAPDLTLKL 247
           SAPDLTLKL
Sbjct: 239 SAPDLTLKL 247

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099591|ref|XP_002311543.1| predicted protein [Populus trichocarpa] gi|222851363|gb|EEE88910.1| predicted protein [Populus trichocarpa]

 Score =  359 bits (922), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 181/249 (72%), Positives = 203/249 (81%), Gaps = 4/249 (1%)

Query: 1   MLPPNSNLELENDSEVSSHVASNISAKEASPGPSKD--TNSSCLTNVIKLNPDPGPLSLD 58
           M+ P S  + END EVSS VASNIS  E SP PSKD  T SS LT+++K   +  P+SLD
Sbjct: 1   MISPKSKSDFENDLEVSSQVASNISVHELSPDPSKDSTTPSSYLTDLVKHQENSVPVSLD 60

Query: 59  LTLHFKSNDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAHK 118
           L+LHF S++I+ LKGTGETS EVAA  TPA T+PRVFSCNYCRRKFYSSQALGGHQNAHK
Sbjct: 61  LSLHFNSSEIE-LKGTGETSIEVAA-HTPATTIPRVFSCNYCRRKFYSSQALGGHQNAHK 118

Query: 119 RERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRPPDMRGGA 178
           RERTMAKRAMRMG+FSDRYT+LASLPL+GSAFRSLGIKAHAAMHQ ++  Q PP  RGGA
Sbjct: 119 RERTMAKRAMRMGMFSDRYTNLASLPLNGSAFRSLGIKAHAAMHQSIIQSQTPPVTRGGA 178

Query: 179 RFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAAMPPPPRTDS 238
           RFEQGY+ MPMFMEDDD+  +WPGSFR+V EAV GN  L+ AQ  N NF A  PPPRTDS
Sbjct: 179 RFEQGYYGMPMFMEDDDVGPYWPGSFRRVGEAVGGNSGLELAQSPNMNFEARAPPPRTDS 238

Query: 239 SAPDLTLKL 247
           SAPDLTLKL
Sbjct: 239 SAPDLTLKL 247

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255573226|ref|XP_002527542.1| zinc finger protein, putative [Ricinus communis] gi|223533092|gb|EEF34851.1| zinc finger protein, putative [Ricinus communis]

 Score =  340 bits (871), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 172/250 (68%), Positives = 201/250 (80%), Gaps = 4/250 (1%)

Query: 1   MLPPNSNLELENDSEVSSHVASNISAKEASPGPSKDTNSSC--LTNVIKLNPDPGPLSLD 58
           M PPNS LE EN+SE+S  VASN+S +E S  PSKD N+ C  LT++ +L   P P+SL+
Sbjct: 1   MTPPNSILESENESEISGQVASNVSLQEPSSDPSKDGNTPCSSLTDLNRLQQSPMPVSLN 60

Query: 59  LTLHFKSNDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAHK 118
           L+L F ++DI+ LKGTGETS E AA    A T+PRVFSCNYCRRKFYSSQALGGHQNAHK
Sbjct: 61  LSLTFNASDIE-LKGTGETSSEAAAPSPAAPTMPRVFSCNYCRRKFYSSQALGGHQNAHK 119

Query: 119 RERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRPPD-MRGG 177
           RERTMAKRAMRMGIFSDRYTSLASLPLHGSA+R+LGIKAH+AMHQ ++P Q+PPD  RGG
Sbjct: 120 RERTMAKRAMRMGIFSDRYTSLASLPLHGSAYRNLGIKAHSAMHQNIIPSQKPPDHTRGG 179

Query: 178 ARFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAAMPPPPRTD 237
           A+FEQGY+ MP+FMEDDD+ L WPGSFRQV+ +V GN  L +AQ  N N   M P  RTD
Sbjct: 180 AKFEQGYYGMPVFMEDDDVGLHWPGSFRQVAGSVGGNIDLQYAQSPNTNIVEMTPQLRTD 239

Query: 238 SSAPDLTLKL 247
           SS+PDLTLKL
Sbjct: 240 SSSPDLTLKL 249

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424442|ref|XP_002285121.1| PREDICTED: zinc finger protein 4-like [Vitis vinifera]

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 171/249 (68%), Positives = 204/249 (81%), Gaps = 5/249 (2%)

Query: 1   MLPPNSNLELENDSEVSSHVASNISAKEASPGPSKD--TNSSCLTNVIKLNPDPGPLSLD 58
           M PPN N+E E++SEVSS VASN+S +E S  PSKD  T SSCLTN+IKL PD G +SLD
Sbjct: 1   MEPPNYNVESEDESEVSSQVASNVSIQETSSDPSKDSTTTSSCLTNLIKLQPDQGSVSLD 60

Query: 59  LTLHFKSNDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAHK 118
           LTL F  ND  +LKG GE+S + A AQ P AT P+VFSCNYCRRKF+SSQALGGHQNAHK
Sbjct: 61  LTLCFNPNDT-KLKGMGESSSD-AVAQAPVATAPKVFSCNYCRRKFFSSQALGGHQNAHK 118

Query: 119 RERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRPPDMRGGA 178
           RERT+AKRAMRMG+F+DRYTSL+SLPLHGSAFRSLGI+AH+++HQ +VP +R PD RGGA
Sbjct: 119 RERTLAKRAMRMGMFADRYTSLSSLPLHGSAFRSLGIEAHSSLHQRMVPLER-PDTRGGA 177

Query: 179 RFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAAMPPPPRTDS 238
           RFEQGY+ +P+F+ED++ +LFWPGSFRQ+ E V G+   + AQG N NF  M PPP TDS
Sbjct: 178 RFEQGYYGLPVFIEDEEAELFWPGSFRQIGERVGGSAIPELAQGPNINFVPMAPPPTTDS 237

Query: 239 SAPDLTLKL 247
           S+PDLTLKL
Sbjct: 238 SSPDLTLKL 246

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398679|gb|ADL36634.1| C2H2L domain class transcription factor [Malus x domestica]

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 154/237 (64%), Positives = 172/237 (72%), Gaps = 15/237 (6%)

Query: 1   MLPPNSNLELENDSEVSSHVA-SNISAKEASPGPSKD--TNSSCLTNVIKLNPDPGPLSL 57
           ML  N NLE ENDSEV+S V  S+I  +E SP PSKD  T SSCLTN      DP P+SL
Sbjct: 1   MLTQNLNLEFENDSEVTSQVTYSSIPLQEESPDPSKDSTTTSSCLTNQKHQQQDPRPVSL 60

Query: 58  DLTLHFKSNDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAH 117
            LTL F S D + LKGTGETS EVAA  T   T+PRVFSCNYC+RKFYSSQALGGHQNAH
Sbjct: 61  HLTLQFSSGDTE-LKGTGETSSEVAAPPTSEGTIPRVFSCNYCKRKFYSSQALGGHQNAH 119

Query: 118 KRERTMAKRAMRMGIFSDRYTSLASLPLHG---SAFRSLGIKAHAAMHQGVVPP---QR- 170
           KRERTMAKRAMRMG+F DRYTSLASLPLH    SAFRSLGI+AH+A+HQ  +     QR 
Sbjct: 120 KRERTMAKRAMRMGMFPDRYTSLASLPLHRSAPSAFRSLGIQAHSAVHQNTMITSDHQRF 179

Query: 171 -PPDMRGGARFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGN 226
             PD RG ARF QGYF +PMFM++DD+ +FWPGSFRQV E   G+     AQ  N N
Sbjct: 180 LVPDTRGVARFRQGYFGVPMFMDEDDVGMFWPGSFRQVGEEAGGH---QLAQNPNMN 233

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806312|ref|NP_001241479.1| uncharacterized protein LOC100794851 [Glycine max] gi|255635712|gb|ACU18205.1| unknown [Glycine max]

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 142/258 (55%), Positives = 184/258 (71%), Gaps = 13/258 (5%)

Query: 2   LPPNSNLELE----NDSEVSSHVASNISAKEASPGPSKD--TNSSCLTNVIKLNPDPGPL 55
           + PN +LE+E     +SEVSS VASN+S +E S GP  D  TN S +TN I ++P+   +
Sbjct: 1   MKPNFDLEVEACAEYESEVSSQVASNVSIQETSIGPCSDSLTNISNITNPIGIHPNSDAI 60

Query: 56  SLDLTLHFKSND------IDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQA 109
           SLDL+L+FK+++      I     +   S    A+QT AAT+PRVFSCNYC+RKF+SSQA
Sbjct: 61  SLDLSLNFKNSEPGGRDSIGFSFSSTSESSNEPASQTTAATIPRVFSCNYCQRKFFSSQA 120

Query: 110 LGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQ 169
           LGGHQNAHKRERT+AKRAMRMG FS+RY +LASLPLHGS FRSLGIKAH+++H G +P  
Sbjct: 121 LGGHQNAHKRERTLAKRAMRMGFFSERYANLASLPLHGS-FRSLGIKAHSSLHHGFLPTM 179

Query: 170 RPPDMRGGARFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAA 229
           RPP+++  AR++QGY   P+F+EDD+ DL WPGSFRQV+EA   +        SN +F  
Sbjct: 180 RPPEIKSNARYDQGYLGHPIFLEDDESDLLWPGSFRQVAEAGDSHQNFILTGSSNMSFTE 239

Query: 230 MPPPPRTDSSAPDLTLKL 247
           + PP   ++S PDLTLKL
Sbjct: 240 VNPPVDIENSTPDLTLKL 257

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806011|ref|NP_001241172.1| uncharacterized protein LOC100791723 [Glycine max] gi|255645596|gb|ACU23292.1| unknown [Glycine max]

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 152/254 (59%), Positives = 182/254 (71%), Gaps = 10/254 (3%)

Query: 1   MLPPNSNLELENDSEVSSHVASNISAKEASPGPSK--DTNSSCLTNVIKLNPDPGPLSLD 58
           M+ PN NLE+EN SE SS VASN+S  EAS   +K   T SSCLT   K   DPG ++LD
Sbjct: 1   MMTPNLNLEIENHSEGSSQVASNVSLHEASHDLTKGSTTTSSCLT---KDETDPGFITLD 57

Query: 59  LTLHFKSNDIDRLKGTGETSGEVAA-AQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAH 117
           LTL+F ++    LK + + S EV A A   A+  PRVFSCNYCRRKFYSSQALGGHQNAH
Sbjct: 58  LTLNFNNSGDGELKVSSDASSEVGAEAPASASATPRVFSCNYCRRKFYSSQALGGHQNAH 117

Query: 118 KRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQ----RPPD 173
           KRERTMAKRAMRMG+F++R+TSLASLPLHGS FRSLG++AH+AMH+  VP      R PD
Sbjct: 118 KRERTMAKRAMRMGMFTERFTSLASLPLHGSPFRSLGLEAHSAMHRRHVPSSVTALRAPD 177

Query: 174 MRGGARFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAAMPPP 233
           MR  A+FE+  F   +FMEDDD+  FWPGSFRQV +   G+  +  AQ SN + A M PP
Sbjct: 178 MRAAAKFERNQFGSLVFMEDDDVGFFWPGSFRQVDQQGAGDVNVGHAQSSNASLAPMVPP 237

Query: 234 PRTDSSAPDLTLKL 247
           P   S++PDLTLKL
Sbjct: 238 PPQASASPDLTLKL 251

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501009|ref|XP_003519322.1| PREDICTED: zinc finger protein 4-like isoform 1 [Glycine max] gi|356501011|ref|XP_003519323.1| PREDICTED: zinc finger protein 4-like isoform 2 [Glycine max]

 Score =  272 bits (696), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 143/258 (55%), Positives = 181/258 (70%), Gaps = 13/258 (5%)

Query: 2   LPPNSNLELE----NDSEVSSHVASNISAKEASPGPSKD--TNSSCLTNVIKLNPDPGPL 55
           + PN +LE+E     +SEVSS VASN+S +E S GP  D  TN S +TN I ++P+   +
Sbjct: 1   MKPNFDLEVEACAAYESEVSSQVASNVSIQETSIGPCSDSLTNISNITNPIGIHPNSDAI 60

Query: 56  SLDLTLHFKS------NDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQA 109
           SLDL+L+FK+      + I     +   S    A+QT AAT+PRVFSCNYC+RKF+SSQA
Sbjct: 61  SLDLSLNFKNSAPGGRDSIGFSFSSTSESSNEPASQTTAATIPRVFSCNYCQRKFFSSQA 120

Query: 110 LGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQ 169
           LGGHQNAHKRERT+AKRAMRMG FS+RY +LASLPLHGS FRSLGIKAH+++H G  P  
Sbjct: 121 LGGHQNAHKRERTLAKRAMRMGFFSERYANLASLPLHGS-FRSLGIKAHSSLHHGFSPTM 179

Query: 170 RPPDMRGGARFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAA 229
           R P+++  ARF+QGY   P+F+EDD+ DL WPGSFRQV+EA   +        SN +F  
Sbjct: 180 RRPEIKNNARFDQGYVGHPIFLEDDESDLLWPGSFRQVAEAGDSHQNFILTGSSNLSFTE 239

Query: 230 MPPPPRTDSSAPDLTLKL 247
           + PP   D+S PDLTLKL
Sbjct: 240 VNPPVDIDNSTPDLTLKL 257

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521175|ref|XP_003529233.1| PREDICTED: zinc finger protein 7-like [Glycine max]

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 147/254 (57%), Positives = 179/254 (70%), Gaps = 13/254 (5%)

Query: 1   MLPPNSNLELENDSEVSSHVASNISAKEASPGPSKDTN--SSCLTNVIKLNPDPGPLSLD 58
           M+ PN NLE E   +V S V  + S +E S   +KD+   SSCLT   K +PDPG +SLD
Sbjct: 1   MMTPNLNLEPEGGLKVLSQVGFDKSIQETSHDLTKDSTATSSCLT---KADPDPGSVSLD 57

Query: 59  LTLHFKSNDIDRLKGTGETSGEVA-AAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAH 117
           L+L+F  ND + LKGT +T+ EV       A+ +PRVFSCNYC+RKF+SSQALGGHQNAH
Sbjct: 58  LSLNFNPND-EELKGTSDTNCEVGPETHASASAIPRVFSCNYCQRKFFSSQALGGHQNAH 116

Query: 118 KRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQG-VVPPQRPPDMRG 176
           KRERTMAKRAMRMG+F++RYTSLASLPLHGSAFRSLG++AHAAMHQG V    R PDM  
Sbjct: 117 KRERTMAKRAMRMGMFAERYTSLASLPLHGSAFRSLGLEAHAAMHQGHVHHSMRAPDMSA 176

Query: 177 GARFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTL---DFAQGSNGNFAAMPPP 233
            A+F + YF  P+F+EDDD+ LFWPGSFRQ+ E  RG   L   + A  SN +F     P
Sbjct: 177 AAKFGKDYFRTPIFVEDDDVGLFWPGSFRQIDE--RGYVNLRHGEHAHNSNTSFVVATAP 234

Query: 234 PRTDSSAPDLTLKL 247
               S +PDLTL+L
Sbjct: 235 QAQTSVSPDLTLRL 248

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585705|ref|XP_002533536.1| zinc finger protein, putative [Ricinus communis] gi|223526603|gb|EEF28853.1| zinc finger protein, putative [Ricinus communis]

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 146/258 (56%), Positives = 178/258 (68%), Gaps = 14/258 (5%)

Query: 2   LPPNSNLELE----NDSEVSSHVASNISAKEASPGPSKDTNSSCLTNVIKLNPDPG-PLS 56
           + PN +LE+E    NDSEVSS VASN+   E S   S  TNSS LTN    +     P+S
Sbjct: 1   MKPNIDLEVEASSENDSEVSSQVASNLCTHEISANDSL-TNSSNLTNAASADQSGSEPVS 59

Query: 57  LDLTLHFKSNDIDRLKGTG-------ETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQA 109
           LDLTL F  ++  R    G       E+S E  +  TPAA +PRVFSCNYC+RKF+SSQA
Sbjct: 60  LDLTLCFNKDESGRRDSVGFSLSSTSESSNEPPSLTTPAA-IPRVFSCNYCQRKFFSSQA 118

Query: 110 LGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQ 169
           LGGHQNAHKRERT+AKRAMRMGIFS+RY SL+SLPLHGS+FR+LGIKAH++ HQ   PP 
Sbjct: 119 LGGHQNAHKRERTLAKRAMRMGIFSERYVSLSSLPLHGSSFRNLGIKAHSSGHQNFAPPL 178

Query: 170 RPPDMRGGARFEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAA 229
           RP ++R  A+F+QGY ++P+F+EDD+ +L WPGSFRQVSEA   NP       SN NF  
Sbjct: 179 RPQEIRNSAKFDQGYLSLPIFVEDDEAELLWPGSFRQVSEADDTNPRFVLTGNSNENFLE 238

Query: 230 MPPPPRTDSSAPDLTLKL 247
             P    ++S PDLTLKL
Sbjct: 239 AAPSADLNNSMPDLTLKL 256

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	247
TAIR|locus:2013820	260	ZFP4 "AT1G66140" [Arabidopsis	0.477	0.453	0.458	3.2e-41
TAIR|locus:2825107	209	ZFP7 "AT1G24625" [Arabidopsis	0.578	0.684	0.503	1.2e-28
TAIR|locus:2183780	272	AT5G10970 "AT5G10970" [Arabido	0.283	0.257	0.586	4.6e-18
TAIR|locus:2146960	235	ZFP3 "AT5G25160" [Arabidopsis	0.408	0.429	0.425	4.6e-18
TAIR|locus:2025777	228	ZFP1 "AT1G80730" [Arabidopsis	0.331	0.359	0.510	2.9e-16
TAIR|locus:2174547	150	ZFP2 "AT5G57520" [Arabidopsis	0.222	0.366	0.618	2.7e-13
TAIR|locus:2156529	173	LATE "LATE FLOWERING" [Arabido	0.214	0.306	0.584	8.2e-12
TAIR|locus:2159088	161	KNU "AT5G14010" [Arabidopsis t	0.165	0.254	0.627	9.4e-11
TAIR|locus:2181007	215	AT5G01860 "AT5G01860" [Arabido	0.242	0.279	0.466	1.5e-09
TAIR|locus:2095883	253	GIS "AT3G58070" [Arabidopsis t	0.145	0.142	0.694	2.9e-07

TAIR|locus:2013820 ZFP4 "AT1G66140" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
 Identities = 67/146 (45%), Positives = 83/146 (56%)

Query:    28 EASPGPSKDTNSSCLTNVIKLNPDPGPLSLDLTLHFKSN-----DIDR------LKGTGE 76
             EAS G S   +S   +N+  +  D  P+SL+L+L F +N     D++       L  T E
Sbjct:    10 EASSGSS---SSQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSE 66

Query:    77 TSGEXXXXXXXXXXXXRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMG---IF 133
             +S              RVFSCNYC+RKFYSSQALGGHQNAHKRERT+AKRAMRMG   +F
Sbjct:    67 SSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVF 126

Query:   134 SDRYTS-----------LASLPLHGS 148
               R +S           L+ LPLHGS
Sbjct:   127 PGRGSSSNYAAAATAAALSCLPLHGS 152

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2825107 ZFP7 "AT1G24625" [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 83/165 (50%), Positives = 101/165 (61%)

Query:    93 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMG-IFSDRYTSLASLPLHGSAFR 151
             RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAM MG +F   +        + S+  
Sbjct:    57 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYT----YTSS-- 110

Query:   152 SLGIKAHAAM-HQGVVPPQRPPDMRGGARFE-QGYFA--MPMFMEDDD--IDLFWPGSFR 205
             SLG++AH+ + H  +  PQ  P +   +RF  QGYF   +P+F + DD   D FWPGSFR
Sbjct:   111 SLGMQAHSGLLHHTLSQPQ--PLV---SRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFR 165

Query:   206 QVSEAVRGNPTLDFAQGSNG---NFAAMPPPPRTDSSAPDLTLKL 247
             QV E     P +  A   +G   N  A       +SS PDLTL+L
Sbjct:   166 QVVEEAEA-PVVVVASTESGLDLNSVAANGGVDNNSSKPDLTLRL 209

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0046982 "protein heterodimerization activity" evidence=IPI

TAIR|locus:2183780 AT5G10970 "AT5G10970" [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 44/75 (58%), Positives = 54/75 (72%)

Query:    93 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMG---IFSDRYTSLASLPLHGS- 148
             ++FSCNYC+R FYSSQALGGHQNAHKRERT+AKR  RM     F   Y   A +P HG  
Sbjct:   102 KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPY-GFAPVPFHGQY 160

Query:   149 AFRSLGIKAHAAMHQ 163
             + R+LGI+AH+  H+
Sbjct:   161 SNRTLGIQAHSMSHK 175

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2146960 ZFP3 "AT5G25160" [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 46/108 (42%), Positives = 65/108 (60%)

Query:    61 LHFKSNDIDRLKGTGETSGEXXXXXXXXXXXXRVFSCNYCRRKFYSSQALGGHQNAHKRE 120
             +H  S++++ +    +T+              ++FSCNYC+R FYSSQALGGHQNAHKRE
Sbjct:    29 VHNSSHELNLIDCIDDTTS--IVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRE 86

Query:   121 RTMAKRAMRMGIFSDRYT---SLASLPLHG--SAFRSLGIKAHAAMHQ 163
             RT+AKR  RM   +  +      + LP HG  +  RSLGI+AH+  H+
Sbjct:    87 RTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHK 134

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2025777 ZFP1 "AT1G80730" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 50/98 (51%), Positives = 57/98 (58%)

Query:    66 NDIDRLKGTGETSGEXXXXXXXXXXXXRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK 125
             N ID  K T  +S              RVFSCNYC+RKFYSSQALGGHQNAHKRERT+AK
Sbjct:    40 NLIDSFK-TSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 98

Query:   126 RAM--RMGIFS-------------DRYTSLASLPLHGS 148
             R    +M + S              R+ S+ASLPLHGS
Sbjct:    99 RGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGS 136

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009640 "photomorphogenesis" evidence=IEP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2174547 ZFP2 "AT5G57520" [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 34/55 (61%), Positives = 40/55 (72%)

Query:    93 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHG 147
             RVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++  +   S+   S    P  G
Sbjct:    50 RVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTVDSDQPYPFSG 104

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2156529 LATE "LATE FLOWERING" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 31/53 (58%), Positives = 39/53 (73%)

Query:    93 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPL 145
             R+F C +C RKF+SSQALGGHQNAHK+ERT A+RA R   F +    L +LP+
Sbjct:    33 RIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNNDFLHTLPV 85

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0042752 "regulation of circadian rhythm" evidence=IMP

GO:0048579 "negative regulation of long-day photoperiodism, flowering" evidence=IMP

TAIR|locus:2159088 KNU "AT5G14010" [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query:    93 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSD 135
             R+F C YC RKFY+SQALGGHQNAHKRER  A+R   +G+ ++
Sbjct:    36 RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR--NLGVLAN 76

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009909 "regulation of flower development" evidence=IMP

GO:0010582 "floral meristem determinacy" evidence=IMP

TAIR|locus:2181007 AT5G01860 "AT5G01860" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 28/60 (46%), Positives = 41/60 (68%)

Query:    93 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRS 152
             RVF+C +C+++F +SQALGGHQNAHK+ER++AKR   + I     +  +  P  G +F S
Sbjct:    65 RVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEIEINYPELSIYSQYPPSGLSFSS 124

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2095883 GIS "AT3G58070" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 25/36 (69%), Positives = 29/36 (80%)

Query:    93 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAM 128
             R F C+YC R F +SQALGGHQNAHKRER +AKR +
Sbjct:    89 RRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGV 124

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009739 "response to gibberellin stimulus" evidence=IMP

GO:0010026 "trichome differentiation" evidence=IMP

GO:0010091 "trichome branching" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00100965 hypothetical protein (247 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	247
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.76
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.7
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.47
KOG3576	267	consensus Ovo and related transcription factors [T	99.43
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.27
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.09
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.86
KOG3576	267	consensus Ovo and related transcription factors [T	98.78
PHA02768	55	hypothetical protein; Provisional	98.6
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.34
PLN03086	567	PRLI-interacting factor K; Provisional	98.26
PHA00733	128	hypothetical protein	98.22
PHA02768	55	hypothetical protein; Provisional	98.17
PHA00733	128	hypothetical protein	98.13
PHA00616	44	hypothetical protein	98.01
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.81
KOG3608	467	consensus Zn finger proteins [General function pre	97.68
PLN03086	567	PRLI-interacting factor K; Provisional	97.68
KOG3608	467	consensus Zn finger proteins [General function pre	97.64
PHA00732	79	hypothetical protein	97.49
PHA00616	44	hypothetical protein	97.38
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.17
KOG3993	500	consensus Transcription factor (contains Zn finger	97.01
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.83
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.29
KOG3993	500	consensus Transcription factor (contains Zn finger	96.27
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.14
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.09
PHA00732	79	hypothetical protein	96.06
smart00355	26	ZnF_C2H2 zinc finger.	95.86
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	95.58
COG5189	423	SFP1 Putative transcriptional repressor regulating	95.48
PRK04860	160	hypothetical protein; Provisional	95.32
COG5048	467	FOG: Zn-finger [General function prediction only]	95.09
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	94.38
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	93.63
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.45
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	93.33
PRK04860	160	hypothetical protein; Provisional	93.2
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	92.64
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	92.54
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	92.28
smart00355	26	ZnF_C2H2 zinc finger.	90.4
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	87.99
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	87.22
COG5048	467	FOG: Zn-finger [General function prediction only]	85.61
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	84.98

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.76  E-value=2.4e-19  Score=157.38  Aligned_cols=113  Identities=19%  Similarity=0.320  Sum_probs=98.8

Q ss_pred             CcccccCcCCcccCCCccccccccccCC---CccccccccccCcccccccCCCC-------------CCCCCCCc-Cchh
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKR---ERTMAKRAMRMGIFSDRYTSLAS-------------LPLHGSAF-RSLG  154 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htg---ekp~~C~~~~Cg~~~k~F~~~s~-------------L~~hgk~F-~~~~  154 (247)
                      ...|+|..|||.+...++|.+|+.+|..   .+.+.|.  .|+   |.|.+...             +.+|||.| |++-
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~--~C~---K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWL  202 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCK--YCG---KVYVSMPALKMHIRTHTLPCECGICGKAFSRPWL  202 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCC--CCC---ceeeehHHHhhHhhccCCCcccccccccccchHH
Confidence            4569999999999999999999999975   5778899  999   88865443             35679999 9999


Q ss_pred             HHHHhhhcCCCCCCCCCCCCcccccccCC-CC--------C-CCccccCCCCccccCCCceecCCCCC
Q 047746          155 IKAHAAMHQGVVPPQRPPDMRGGARFEQG-YF--------A-MPMFMEDDDIDLFWPGSFRQVSEAVR  212 (247)
Q Consensus       155 L~~H~riHtgekPy~~~~~~~cg~~f~~~-~l--------~-~P~~~~~c~~~f~~~~s~~~~~~~~~  212 (247)
                      |+.|+|+|||||||.|   ..|+|.|.+. +|        + ++|.|..|+|.|...+.|.+|.+.+=
T Consensus       203 LQGHiRTHTGEKPF~C---~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~C  267 (279)
T KOG2462|consen  203 LQGHIRTHTGEKPFSC---PHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESAC  267 (279)
T ss_pred             hhcccccccCCCCccC---CcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhcc
Confidence            9999999999999998   6999999985 44        2 89999999999999999999988654

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.70  E-value=2.9e-18  Score=150.56  Aligned_cols=75  Identities=27%  Similarity=0.422  Sum_probs=67.9

Q ss_pred             CcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .-+++|.+|||.|.+.+-|.+|+|+|||||||.|.                  .|+|+| .+++|+.||.+|.+.|+|+|
T Consensus       185 ~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~------------------hC~kAFADRSNLRAHmQTHS~~K~~qC  246 (279)
T KOG2462|consen  185 TLPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCP------------------HCGKAFADRSNLRAHMQTHSDVKKHQC  246 (279)
T ss_pred             CCCcccccccccccchHHhhcccccccCCCCccCC------------------cccchhcchHHHHHHHHhhcCCccccC
Confidence            34788999999999999999999999999999998                  677999 89999999999999999998


Q ss_pred             CCCCcccccccCC-CCCC
Q 047746          171 PPDMRGGARFEQG-YFAM  187 (247)
Q Consensus       171 ~~~~~cg~~f~~~-~l~~  187 (247)
                         .+|+|.|.+. ||++
T Consensus       247 ---~~C~KsFsl~SyLnK  261 (279)
T KOG2462|consen  247 ---PRCGKSFALKSYLNK  261 (279)
T ss_pred             ---cchhhHHHHHHHHHH
Confidence               9999999985 5653

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.47  E-value=9.5e-15  Score=141.58  Aligned_cols=74  Identities=23%  Similarity=0.416  Sum_probs=68.9

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      .+.+..|.|+.|.|.|...+.|.+|.--|+|.|||+|.                  +|.|+| .+.+|..|+|.|.||||
T Consensus       889 kte~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~------------------iCkKAFKHKHHLtEHkRLHSGEKP  950 (1007)
T KOG3623|consen  889 KTEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCI------------------ICKKAFKHKHHLTEHKRLHSGEKP  950 (1007)
T ss_pred             cCccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccc------------------hhhHhhhhhhhhhhhhhhccCCCc
Confidence            45567899999999999999999999999999999998                  777999 89999999999999999


Q ss_pred             CCCCCCCcccccccCC
Q 047746          168 PQRPPDMRGGARFEQG  183 (247)
Q Consensus       168 y~~~~~~~cg~~f~~~  183 (247)
                      |+|   ..|+|||++.
T Consensus       951 fQC---dKClKRFSHS  963 (1007)
T KOG3623|consen  951 FQC---DKCLKRFSHS  963 (1007)
T ss_pred             chh---hhhhhhcccc
Confidence            998   9999999983

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.43  E-value=4.7e-14  Score=119.42  Aligned_cols=96  Identities=23%  Similarity=0.318  Sum_probs=82.7

Q ss_pred             CCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCC
Q 047746           91 VPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQ  169 (247)
Q Consensus        91 gekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~  169 (247)
                      +...|.|.+|+|+|....-|.+|++.|...|.|.|.                  .|||.| ....|++|+|+|||.+||.
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct------------------~cgkgfndtfdlkrh~rthtgvrpyk  175 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCT------------------FCGKGFNDTFDLKRHTRTHTGVRPYK  175 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHh------------------hccCcccchhhhhhhhccccCccccc
Confidence            356799999999999999999999999999999998                  788999 7889999999999999999


Q ss_pred             CCCCCcccccccCC-CC--------------------CCCccccCCCCccccCCCceec
Q 047746          170 RPPDMRGGARFEQG-YF--------------------AMPMFMEDDDIDLFWPGSFRQV  207 (247)
Q Consensus       170 ~~~~~~cg~~f~~~-~l--------------------~~P~~~~~c~~~f~~~~s~~~~  207 (247)
                      |   ..|+|.|.+. .|                    .+-|.|+|||.....+..+-.|
T Consensus       176 c---~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h  231 (267)
T KOG3576|consen  176 C---SLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLH  231 (267)
T ss_pred             h---hhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHH
Confidence            8   8999999984 21                    1578999999877666555444

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.27  E-value=2.3e-12  Score=126.94  Aligned_cols=48  Identities=29%  Similarity=0.565  Sum_probs=43.8

Q ss_pred             ccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLH  146 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~h  146 (247)
                      +++|.+|.|.|.+.++|..|.|.|||||||+|.  .||   .+|..+..|..|
T Consensus       353 khkCr~CakvfgS~SaLqiHlRSHTGERPfqCn--vCG---~~FSTkGNLKvH  400 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQIHLRSHTGERPFQCN--VCG---NRFSTKGNLKVH  400 (958)
T ss_pred             cchhhhhHhhcCchhhhhhhhhccCCCCCeeec--ccc---cccccccceeee
Confidence            478999999999999999999999999999999  999   888888777554

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.09  E-value=1.9e-11  Score=118.99  Aligned_cols=82  Identities=24%  Similarity=0.293  Sum_probs=52.4

Q ss_pred             ccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPP  172 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~  172 (247)
                      .|.|..|..+|.++..|.+|+.+|.-..+-.-...+     -...++..+..|||+| .+.+|+.|.|||.|||||+|  
T Consensus       240 nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltq-----sa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeC--  312 (1007)
T KOG3623|consen  240 NFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQ-----SALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFEC--  312 (1007)
T ss_pred             CCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccc-----hhhhccccccccchhhhhHHHHHhhheeecCCCCcCC--
Confidence            456666666666666666666665432211000000     0001122234678999 89999999999999999998  


Q ss_pred             CCcccccccCC
Q 047746          173 DMRGGARFEQG  183 (247)
Q Consensus       173 ~~~cg~~f~~~  183 (247)
                       ..|+|||++.
T Consensus       313 -pnCkKRFSHS  322 (1007)
T KOG3623|consen  313 -PNCKKRFSHS  322 (1007)
T ss_pred             -cccccccccC
Confidence             8899999983

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.86  E-value=1.1e-09  Score=108.31  Aligned_cols=74  Identities=26%  Similarity=0.399  Sum_probs=63.2

Q ss_pred             CcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC---
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP---  167 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP---  167 (247)
                      ..|-.|-+|.|.....++|+-|.|+|+|||||+|+                  +||++| ++.+|+.||-+|....|   
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCK------------------iCgRAFtTkGNLkaH~~vHka~p~~R~  664 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCK------------------ICGRAFTTKGNLKAHMSVHKAKPPARV  664 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhhcccCcCccccc------------------cccchhccccchhhcccccccCccccc
Confidence            34679999999999999999999999999999999                  788999 89999999999986544   


Q ss_pred             -CCCCCCCcccccccCC
Q 047746          168 -PQRPPDMRGGARFEQG  183 (247)
Q Consensus       168 -y~~~~~~~cg~~f~~~  183 (247)
                       +.||+...|-+.|..+
T Consensus       665 q~ScP~~~ic~~kftn~  681 (958)
T KOG1074|consen  665 QFSCPSTFICQKKFTNA  681 (958)
T ss_pred             cccCCchhhhccccccc
Confidence             3465555788888875

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.78  E-value=8.3e-10  Score=93.80  Aligned_cols=70  Identities=19%  Similarity=0.255  Sum_probs=57.5

Q ss_pred             CCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhh-hcCC---
Q 047746           90 TVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAA-MHQG---  164 (247)
Q Consensus        90 tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~r-iHtg---  164 (247)
                      ..-|.|-|..|||.|..-..|++|.|+|||.|||+|.                  .|+|+| +...|..|.+ +|.-   
T Consensus       141 ~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~------------------~c~kaftqrcsleshl~kvhgv~~~  202 (267)
T KOG3576|consen  141 SDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCS------------------LCEKAFTQRCSLESHLKKVHGVQHQ  202 (267)
T ss_pred             cHHHHHHHhhccCcccchhhhhhhhccccCccccchh------------------hhhHHHHhhccHHHHHHHHcCchHH
Confidence            3457899999999999999999999999999999999                  667889 7889999976 6643   


Q ss_pred             -------CCCCCCCCCCcccccc
Q 047746          165 -------VVPPQRPPDMRGGARF  180 (247)
Q Consensus       165 -------ekPy~~~~~~~cg~~f  180 (247)
                             +|-|.|   .+||..-
T Consensus       203 yaykerr~kl~vc---edcg~t~  222 (267)
T KOG3576|consen  203 YAYKERRAKLYVC---EDCGYTS  222 (267)
T ss_pred             HHHHHhhhheeee---cccCCCC
Confidence                   456666   6777543

>PHA02768 hypothetical protein; Provisional

Probab=98.60  E-value=7.4e-09  Score=70.61  Aligned_cols=34  Identities=12%  Similarity=0.340  Sum_probs=30.7

Q ss_pred             ccccCcCCcccCCCccccccccccCCCccccccccccC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMG  131 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg  131 (247)
                      -|+|++|||.|...++|..|+++|+  ++|+|.  .|+
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~--~C~   38 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLS--NCK   38 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCC--ccc
Confidence            3899999999999999999999999  688887  555

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.34  E-value=1.5e-07  Score=54.70  Aligned_cols=25  Identities=24%  Similarity=0.390  Sum_probs=22.7

Q ss_pred             hHHHHhhhcCCCCCCCCCCCCccccccc
Q 047746          154 GIKAHAAMHQGVVPPQRPPDMRGGARFE  181 (247)
Q Consensus       154 ~L~~H~riHtgekPy~~~~~~~cg~~f~  181 (247)
                      +|.+|+++|+|+|||.|   ..|+++|.
T Consensus         1 ~l~~H~~~H~~~k~~~C---~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKC---PYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEE---SSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCC---CCCcCeeC
Confidence            58999999999999987   88999986

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.26  E-value=4.5e-07  Score=88.28  Aligned_cols=84  Identities=11%  Similarity=0.115  Sum_probs=65.0

Q ss_pred             CcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCcCchhHHHHhhhcCCCCCCCCC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRP  171 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F~~~~L~~H~riHtgekPy~~~  171 (247)
                      ++.+.|.+|++.|. ...|..|+++|+  +++.|.   |                |+.|.+..|..|+++|.++||+.| 
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp---C----------------g~~~~R~~L~~H~~thCp~Kpi~C-  507 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP---C----------------GVVLEKEQMVQHQASTCPLRLITC-  507 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC---C----------------CCCcchhHHHhhhhccCCCCceeC-
Confidence            45678899999885 567899988875  788885   4                444566899999999999999987 


Q ss_pred             CCCcccccccCC-----------CC--------CCCccccCCCCcccc
Q 047746          172 PDMRGGARFEQG-----------YF--------AMPMFMEDDDIDLFW  200 (247)
Q Consensus       172 ~~~~cg~~f~~~-----------~l--------~~P~~~~~c~~~f~~  200 (247)
                        ..|++.|..+           .|        .+|+.|..|++.+..
T Consensus       508 --~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrl  553 (567)
T PLN03086        508 --RFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVML  553 (567)
T ss_pred             --CCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeee
Confidence              6799888532           11        379999999987653

>PHA00733 hypothetical protein

Probab=98.22  E-value=6.5e-07  Score=71.73  Aligned_cols=55  Identities=20%  Similarity=0.295  Sum_probs=46.4

Q ss_pred             CCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746           90 TVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus        90 tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      .+.++|.|+.|++.|.....|..|++.|  +++|.|.                  .|++.| ....|..|++...+
T Consensus        69 ~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~------------------~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         69 KAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCP------------------VCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCC------------------CCCCccCCHHHHHHHHHHhcC
Confidence            3478999999999999999999999987  4578887                  677899 78899999886543

>PHA02768 hypothetical protein; Provisional

Probab=98.17  E-value=1.1e-06  Score=59.94  Aligned_cols=34  Identities=9%  Similarity=0.077  Sum_probs=29.7

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQG  183 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~~  183 (247)
                      .|||.| +..+|+.|||+|+  +||.|   ..|++.|.+.
T Consensus        10 ~CGK~Fs~~~~L~~H~r~H~--k~~kc---~~C~k~f~~~   44 (55)
T PHA02768         10 ICGEIYIKRKSMITHLRKHN--TNLKL---SNCKRISLRT   44 (55)
T ss_pred             hhCCeeccHHHHHHHHHhcC--CcccC---Ccccceeccc
Confidence            778999 8999999999999  78876   8888888864

>PHA00733 hypothetical protein

Probab=98.13  E-value=1.2e-06  Score=70.22  Aligned_cols=68  Identities=16%  Similarity=0.118  Sum_probs=50.7

Q ss_pred             CcccccCcCCcccCCCcccccc--c---cccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGH--Q---NAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H--~---r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      .+++.|.+|.+.|.....|..|  .   ..+.+++||.|.                  .||+.| ....|..|+++|  +
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~------------------~Cgk~Fss~s~L~~H~r~h--~   97 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCP------------------LCLMPFSSSVSLKQHIRYT--E   97 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCC------------------CCCCcCCCHHHHHHHHhcC--C
Confidence            6789999999999988887765  1   133458899998                  567889 788999999987  3


Q ss_pred             CCCCCCCCCcccccccC
Q 047746          166 VPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       166 kPy~~~~~~~cg~~f~~  182 (247)
                      ++|.|   ..|++.|..
T Consensus        98 ~~~~C---~~CgK~F~~  111 (128)
T PHA00733         98 HSKVC---PVCGKEFRN  111 (128)
T ss_pred             cCccC---CCCCCccCC
Confidence            46654   555555543

>PHA00616 hypothetical protein

Probab=98.01  E-value=5e-07  Score=58.85  Aligned_cols=33  Identities=12%  Similarity=0.325  Sum_probs=31.8

Q ss_pred             ccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ||+|..||+.|...+.|..|++.|+|++++.|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            699999999999999999999999999999887

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.81  E-value=3e-06  Score=49.20  Aligned_cols=25  Identities=20%  Similarity=0.343  Sum_probs=20.5

Q ss_pred             cccccccccCCCccccccccccCccccccc
Q 047746          109 ALGGHQNAHKRERTMAKRAMRMGIFSDRYT  138 (247)
Q Consensus       109 ~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~  138 (247)
                      +|..|+++|+++|||.|.  .|+   +.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~--~C~---k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCP--YCG---KSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEES--SSS---EEES
T ss_pred             CHHHHhhhcCCCCCCCCC--CCc---CeeC
Confidence            477899999999999999  776   5553

...

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=97.68  E-value=1.1e-05  Score=73.81  Aligned_cols=82  Identities=16%  Similarity=0.227  Sum_probs=51.8

Q ss_pred             cccCcCCcccCCCccccccccc-cCCCccccccccccCcccccccCCCCCCC----------------CCCCc-CchhHH
Q 047746           95 FSCNYCRRKFYSSQALGGHQNA-HKRERTMAKRAMRMGIFSDRYTSLASLPL----------------HGSAF-RSLGIK  156 (247)
Q Consensus        95 f~C~~Cgk~F~~~~~L~~H~r~-Htgekp~~C~~~~Cg~~~k~F~~~s~L~~----------------hgk~F-~~~~L~  156 (247)
                      |+|+.|.-+....+.|..|+|. |.+.|||+|.  .|.   +.|...+.|..                |...| ....|+
T Consensus       264 ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd--~Cd---~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~  338 (467)
T KOG3608|consen  264 YKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCD--ECD---TRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMR  338 (467)
T ss_pred             ccccccccCCCChHHHHHHHHhhhccCCCcccc--chh---hhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHH
Confidence            5566666666666666667663 6777888887  777   55554444322                23445 456788


Q ss_pred             HHhhh-cCCC--CCCCCCCCCcccccccCCC
Q 047746          157 AHAAM-HQGV--VPPQRPPDMRGGARFEQGY  184 (247)
Q Consensus       157 ~H~ri-Htge--kPy~~~~~~~cg~~f~~~~  184 (247)
                      +|++- |-|.  .+|.|   --|.+-|..|.
T Consensus       339 ~H~~evhEg~np~~Y~C---H~Cdr~ft~G~  366 (467)
T KOG3608|consen  339 RHFLEVHEGNNPILYAC---HCCDRFFTSGK  366 (467)
T ss_pred             HHHHHhccCCCCCceee---ecchhhhccch
Confidence            88874 4454  45766   77888888763

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.68  E-value=2.2e-05  Score=76.72  Aligned_cols=67  Identities=16%  Similarity=0.220  Sum_probs=55.2

Q ss_pred             cccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-C----------chhHHHHhhh
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-R----------SLGIKAHAAM  161 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~----------~~~L~~H~ri  161 (247)
                      ++|.|. |++.| .+..|..|+++|..+|++.|.  .                |++.| .          ...|+.|.++
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~--f----------------C~~~v~~g~~~~d~~d~~s~Lt~HE~~  536 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCR--F----------------CGDMVQAGGSAMDVRDRLRGMSEHESI  536 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCC--C----------------CCCccccCccccchhhhhhhHHHHHHh
Confidence            678999 99765 668999999999999999999  4                44444 1          3489999999


Q ss_pred             cCCCCCCCCCCCCcccccccCC
Q 047746          162 HQGVVPPQRPPDMRGGARFEQG  183 (247)
Q Consensus       162 HtgekPy~~~~~~~cg~~f~~~  183 (247)
                      + |.+++.|   ..||+.|...
T Consensus       537 C-G~rt~~C---~~Cgk~Vrlr  554 (567)
T PLN03086        537 C-GSRTAPC---DSCGRSVMLK  554 (567)
T ss_pred             c-CCcceEc---cccCCeeeeh
Confidence            7 9999987   8999988754

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=97.64  E-value=1.7e-06  Score=79.03  Aligned_cols=36  Identities=28%  Similarity=0.525  Sum_probs=28.3

Q ss_pred             ccccCc--CCcccCCCccccccccccCCCccccccccccC
Q 047746           94 VFSCNY--CRRKFYSSQALGGHQNAHKRERTMAKRAMRMG  131 (247)
Q Consensus        94 pf~C~~--Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg  131 (247)
                      .+.|+.  |-+.|..+..|..|.|.|++||-.+|.  .||
T Consensus       177 v~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp--~Cg  214 (467)
T KOG3608|consen  177 VTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACP--HCG  214 (467)
T ss_pred             eeeccchhhhhhhccHHHHHHHHHhcCCCeEEecc--hHH
Confidence            466765  778888888888888888888888887  776

>PHA00732 hypothetical protein

Probab=97.49  E-value=3.6e-05  Score=56.65  Aligned_cols=33  Identities=21%  Similarity=0.264  Sum_probs=27.6

Q ss_pred             ccccCcCCcccCCCccccccccc-cCCCccccccccccC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNA-HKRERTMAKRAMRMG  131 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~-Htgekp~~C~~~~Cg  131 (247)
                      ||.|.+|++.|.....|..|++. |++   +.|.  .|+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~--~Cg   34 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCP--VCN   34 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccC--CCC
Confidence            58999999999999999999984 764   5687  554

>PHA00616 hypothetical protein

Probab=97.38  E-value=6.1e-05  Score=49.11  Aligned_cols=26  Identities=12%  Similarity=0.029  Sum_probs=23.5

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .||+.| .++.|..|++.|+|++|+.|
T Consensus         6 ~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          6 RCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             hhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            677899 89999999999999999865

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.17  E-value=3.2e-05  Score=43.04  Aligned_cols=23  Identities=30%  Similarity=0.700  Sum_probs=21.4

Q ss_pred             cccCcCCcccCCCcccccccccc
Q 047746           95 FSCNYCRRKFYSSQALGGHQNAH  117 (247)
Q Consensus        95 f~C~~Cgk~F~~~~~L~~H~r~H  117 (247)
                      |.|.+|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999865

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.01  E-value=0.00022  Score=66.74  Aligned_cols=71  Identities=24%  Similarity=0.358  Sum_probs=45.1

Q ss_pred             ccccCcCCcccCCCccccccccccCCCcccccc-------ccccCc----ccc----cccCCCCCCCCCCCc-CchhHHH
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR-------AMRMGI----FSD----RYTSLASLPLHGSAF-RSLGIKA  157 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~-------~~~Cg~----~~k----~F~~~s~L~~hgk~F-~~~~L~~  157 (247)
                      -|+|.+|+|.|....+|..|+|-|+-..--.-.       ..+-+.    -.+    .-.....+..|+|.| +...|++
T Consensus       295 EYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrK  374 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRK  374 (500)
T ss_pred             eecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHH
Confidence            489999999999999999999988643211100       000000    000    011123456789999 8889999


Q ss_pred             HhhhcCC
Q 047746          158 HAAMHQG  164 (247)
Q Consensus       158 H~riHtg  164 (247)
                      |+.+|..
T Consensus       375 Hqlthq~  381 (500)
T KOG3993|consen  375 HQLTHQR  381 (500)
T ss_pred             hHHhhhc
Confidence            9988864

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.83  E-value=0.00017  Score=41.63  Aligned_cols=26  Identities=35%  Similarity=0.662  Sum_probs=23.8

Q ss_pred             ccccCcCCcccCCCccccccccccCC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKR  119 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htg  119 (247)
                      +|.|..|++.|....+|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999998753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.29  E-value=0.00043  Score=38.16  Aligned_cols=23  Identities=35%  Similarity=0.753  Sum_probs=19.4

Q ss_pred             cccCcCCcccCCCcccccccccc
Q 047746           95 FSCNYCRRKFYSSQALGGHQNAH  117 (247)
Q Consensus        95 f~C~~Cgk~F~~~~~L~~H~r~H  117 (247)
                      |.|++|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            78999999999999999999875

...

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=96.27  E-value=0.00041  Score=65.03  Aligned_cols=96  Identities=15%  Similarity=0.163  Sum_probs=61.6

Q ss_pred             ccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCC--C
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQ--R  170 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~--~  170 (247)
                      -|.|..|...|.....|.+|+-...-.--|+|.                  .|+|.| -..+|..|.|.|.-.+-..  -
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCP------------------EC~KVFsCPANLASHRRWHKPR~eaa~a~  328 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCP------------------ECDKVFSCPANLASHRRWHKPRPEAAKAG  328 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCC------------------cccccccCchhhhhhhcccCCchhhhhcC
Confidence            499999999999999999996433333457787                  556889 7999999999996322111  0


Q ss_pred             -CCCC-c-----ccccccC-C--CCCCCccccCCCCccccCCCceec
Q 047746          171 -PPDM-R-----GGARFEQ-G--YFAMPMFMEDDDIDLFWPGSFRQV  207 (247)
Q Consensus       171 -~~~~-~-----cg~~f~~-~--~l~~P~~~~~c~~~f~~~~s~~~~  207 (247)
                       +|.. .     .++.-.+ |  .-.-=|.|.+|+|.|.+..+||.|
T Consensus       329 ~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKH  375 (500)
T KOG3993|consen  329 SPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKH  375 (500)
T ss_pred             CCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHh
Confidence             0100 0     0000000 0  001146888888888888888887

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.14  E-value=0.0026  Score=57.85  Aligned_cols=51  Identities=22%  Similarity=0.455  Sum_probs=37.6

Q ss_pred             CCcccccCc--CCcccCCCccccccccc-c------------------CCCccccccccccCcccccccCCCCCCCC
Q 047746           91 VPRVFSCNY--CRRKFYSSQALGGHQNA-H------------------KRERTMAKRAMRMGIFSDRYTSLASLPLH  146 (247)
Q Consensus        91 gekpf~C~~--Cgk~F~~~~~L~~H~r~-H------------------tgekp~~C~~~~Cg~~~k~F~~~s~L~~h  146 (247)
                      ++|||+|++  |.|+|...-.|+-|+.- |                  ...|||+|.  .|+   |+|.....|.+|
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCe--vC~---KRYKNlNGLKYH  417 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCE--VCD---KRYKNLNGLKYH  417 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceecc--ccc---hhhccCccceec
Confidence            469999987  99999998888877542 2                  124899999  677   666666666655

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.09  E-value=0.0024  Score=43.28  Aligned_cols=50  Identities=22%  Similarity=0.440  Sum_probs=35.8

Q ss_pred             ccccCcCCcccCCCcccccccc-ccCCC-ccccccccccCcccccccCCCCCCCCCCCcCchhHHHHhhhcC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQN-AHKRE-RTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQ  163 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r-~Htge-kp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F~~~~L~~H~riHt  163 (247)
                      .|.|++|++ ..+...|..|.. .|..+ +.+.|.                  +|...+. .+|..|++++.
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CP------------------iC~~~~~-~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCP------------------ICSSRVT-DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCC------------------Cchhhhh-hHHHHHHHHhc
Confidence            489999999 455678999965 46665 567787                  4444442 38899998764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=96.06  E-value=0.0048  Score=45.33  Aligned_cols=32  Identities=16%  Similarity=0.181  Sum_probs=25.9

Q ss_pred             CCCCCc-CchhHHHHhhh-cCCCCCCCCCCCCcccccccC
Q 047746          145 LHGSAF-RSLGIKAHAAM-HQGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~ri-HtgekPy~~~~~~~cg~~f~~  182 (247)
                      .||+.| +...|+.|++. |++   +.|   ..|++.|.+
T Consensus         6 ~Cgk~F~s~s~Lk~H~r~~H~~---~~C---~~CgKsF~~   39 (79)
T PHA00732          6 ICGFTTVTLFALKQHARRNHTL---TKC---PVCNKSYRR   39 (79)
T ss_pred             CCCCccCCHHHHHHHhhcccCC---Ccc---CCCCCEeCC
Confidence            677899 88999999984 764   455   889999975

>smart00355 ZnF_C2H2 zinc finger

Probab=95.86  E-value=0.0015  Score=36.29  Aligned_cols=25  Identities=32%  Similarity=0.628  Sum_probs=22.4

Q ss_pred             cccCcCCcccCCCccccccccccCC
Q 047746           95 FSCNYCRRKFYSSQALGGHQNAHKR  119 (247)
Q Consensus        95 f~C~~Cgk~F~~~~~L~~H~r~Htg  119 (247)
                      |.|..|++.|.....|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            6899999999999999999987753

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.58  E-value=0.0047  Score=34.05  Aligned_cols=18  Identities=28%  Similarity=0.536  Sum_probs=16.1

Q ss_pred             CCCCCc-CchhHHHHhhhc
Q 047746          145 LHGSAF-RSLGIKAHAAMH  162 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riH  162 (247)
                      .|++.| +...|..|+++|
T Consensus         5 ~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    5 ICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             TTTEEESSHHHHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHhHC
Confidence            788999 899999999986

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=95.48  E-value=0.016  Score=52.83  Aligned_cols=72  Identities=15%  Similarity=0.054  Sum_probs=44.1

Q ss_pred             CCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhh-cCCCCCCCCCCCCcccccccCCCCCCCccccCCC
Q 047746          118 KRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAM-HQGVVPPQRPPDMRGGARFEQGYFAMPMFMEDDD  195 (247)
Q Consensus       118 tgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~ri-HtgekPy~~~~~~~cg~~f~~~~l~~P~~~~~c~  195 (247)
                      .++|||+|....                |.|.+ ..-+|+-|+.- |...|-..- |..+-...|.  .-.+||.|+-|+
T Consensus       345 ~d~KpykCpV~g----------------C~K~YknqnGLKYH~lhGH~~~~~~~~-p~p~~~~~F~--~~~KPYrCevC~  405 (423)
T COG5189         345 KDGKPYKCPVEG----------------CNKKYKNQNGLKYHMLHGHQNQKLHEN-PSPEKMNIFS--AKDKPYRCEVCD  405 (423)
T ss_pred             ecCceecCCCCC----------------chhhhccccchhhhhhccccCcccCCC-CCcccccccc--ccCCceeccccc
Confidence            346999999444                55666 55577777652 544443332 2222223342  135899999999


Q ss_pred             CccccCCCceecC
Q 047746          196 IDLFWPGSFRQVS  208 (247)
Q Consensus       196 ~~f~~~~s~~~~~  208 (247)
                      |.+.--..|+-|-
T Consensus       406 KRYKNlNGLKYHr  418 (423)
T COG5189         406 KRYKNLNGLKYHR  418 (423)
T ss_pred             hhhccCccceecc
Confidence            9988777777653

>PRK04860 hypothetical protein; Provisional

Probab=95.32  E-value=0.0049  Score=51.22  Aligned_cols=33  Identities=21%  Similarity=0.463  Sum_probs=29.4

Q ss_pred             cccccCcCCcccCCCccccccccccCCCccccccccccC
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMG  131 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg  131 (247)
                      -+|.|. |++   ....+.+|.++|+++++|.|.  .|+
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~--~C~  150 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCR--RCG  150 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECC--CCC
Confidence            479998 998   677789999999999999999  676

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.09  E-value=0.017  Score=52.58  Aligned_cols=62  Identities=24%  Similarity=0.401  Sum_probs=54.1

Q ss_pred             cccccCcCCcccCCCcccccccc--ccCCC--ccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQN--AHKRE--RTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r--~Htge--kp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      .++.|..|.+.|.....|..|.+  .|+++  +|+.|...                .|++.| +...|..|..+|++-++
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~----------------~~~~~~~~~~~~~~~~~~~~~~~~  351 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYS----------------LCGKLFSRNDALKRHILLHTSISP  351 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeecc----------------CCCccccccccccCCcccccCCCc
Confidence            47999999999999999999999  89999  99999721                577888 88889999999998887


Q ss_pred             CCC
Q 047746          168 PQR  170 (247)
Q Consensus       168 y~~  170 (247)
                      +.+
T Consensus       352 ~~~  354 (467)
T COG5048         352 AKE  354 (467)
T ss_pred             ccc
Confidence            765

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.38  E-value=0.0075  Score=40.51  Aligned_cols=32  Identities=16%  Similarity=0.281  Sum_probs=23.6

Q ss_pred             CCcccccCcCCcccCCCccccccccccCCCcc
Q 047746           91 VPRVFSCNYCRRKFYSSQALGGHQNAHKRERT  122 (247)
Q Consensus        91 gekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp  122 (247)
                      .+.|..|++|+..+.+..+|.+|+.++.+.||
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            36789999999999999999999998888776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=93.63  E-value=0.007  Score=34.06  Aligned_cols=23  Identities=30%  Similarity=0.730  Sum_probs=20.9

Q ss_pred             cccCcCCcccCCCcccccccccc
Q 047746           95 FSCNYCRRKFYSSQALGGHQNAH  117 (247)
Q Consensus        95 f~C~~Cgk~F~~~~~L~~H~r~H  117 (247)
                      |.|..|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999998764

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.45  E-value=0.024  Score=32.66  Aligned_cols=22  Identities=32%  Similarity=0.685  Sum_probs=20.5

Q ss_pred             cccCcCCcccCCCccccccccc
Q 047746           95 FSCNYCRRKFYSSQALGGHQNA  116 (247)
Q Consensus        95 f~C~~Cgk~F~~~~~L~~H~r~  116 (247)
                      |.|..|+|.|.....|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=93.33  E-value=0.041  Score=40.60  Aligned_cols=68  Identities=15%  Similarity=0.268  Sum_probs=18.2

Q ss_pred             ccCcCCcccCCCccccccccccCC-Ccc---ccccccccCcc-cccccCCCCCCCCCCCc-CchhHHHHhhhcC
Q 047746           96 SCNYCRRKFYSSQALGGHQNAHKR-ERT---MAKRAMRMGIF-SDRYTSLASLPLHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus        96 ~C~~Cgk~F~~~~~L~~H~r~Htg-ekp---~~C~~~~Cg~~-~k~F~~~s~L~~hgk~F-~~~~L~~H~riHt  163 (247)
                      +|.+|+..|.....|..|+....+ ..+   +.........+ .........+..|++.| ....|..|++.+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            599999999999999999865433 222   00000000000 01111224467889999 7889999999753

>PRK04860 hypothetical protein; Provisional

Probab=93.20  E-value=0.051  Score=45.17  Aligned_cols=28  Identities=18%  Similarity=0.261  Sum_probs=24.4

Q ss_pred             CchhHHHHhhhcCCCCCCCCCCCCccccccc
Q 047746          151 RSLGIKAHAAMHQGVVPPQRPPDMRGGARFE  181 (247)
Q Consensus       151 ~~~~L~~H~riHtgekPy~~~~~~~cg~~f~  181 (247)
                      ....+.+|.|+|+|+++|.|   ..|+..|.
T Consensus       127 ~~~~~rrH~ri~~g~~~YrC---~~C~~~l~  154 (160)
T PRK04860        127 HQLTVRRHNRVVRGEAVYRC---RRCGETLV  154 (160)
T ss_pred             eeCHHHHHHHHhcCCccEEC---CCCCceeE
Confidence            46788999999999999988   88888875

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=92.64  E-value=0.098  Score=35.20  Aligned_cols=33  Identities=15%  Similarity=0.281  Sum_probs=21.9

Q ss_pred             cCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746          117 HKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus       117 Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      +..+.|..|.                  .|+..+ +..+|++|+.++++.||
T Consensus        19 ~~S~~PatCP------------------~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCP------------------ICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-T------------------TT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCC------------------cchhhccchhhHHHHHHHHhcccC
Confidence            4456788887                  566777 67899999999998887

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=92.54  E-value=0.052  Score=30.95  Aligned_cols=20  Identities=20%  Similarity=0.325  Sum_probs=16.7

Q ss_pred             CCCCCc-CchhHHHHhhhcCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtg  164 (247)
                      .|++.| ....|..|++.|.+
T Consensus         6 ~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    6 ECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             TTTEEESSHHHHHHHHCTTTT
T ss_pred             ccCCccCChhHHHHHhHHhcC
Confidence            677889 78899999998853

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=92.28  E-value=0.073  Score=28.82  Aligned_cols=19  Identities=21%  Similarity=0.525  Sum_probs=15.5

Q ss_pred             CCCCCc-CchhHHHHhhhcC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHt  163 (247)
                      +|++.| ....|..|+++|.
T Consensus         5 ~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    5 ICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             STS-EESSHHHHHHHHHHHS
T ss_pred             CCCCcCCcHHHHHHHHHhhC
Confidence            788999 8899999999873

...

>smart00355 ZnF_C2H2 zinc finger

Probab=90.40  E-value=0.2  Score=27.28  Aligned_cols=20  Identities=25%  Similarity=0.390  Sum_probs=16.9

Q ss_pred             CCCCCc-CchhHHHHhhhcCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtg  164 (247)
                      .|++.| ....|..|+++|..
T Consensus         5 ~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        5 ECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCcchhCCHHHHHHHHHHhcc
Confidence            678899 78899999998853

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=87.99  E-value=0.096  Score=29.88  Aligned_cols=20  Identities=35%  Similarity=0.800  Sum_probs=16.3

Q ss_pred             cccCcCCcccCCCcccccccc
Q 047746           95 FSCNYCRRKFYSSQALGGHQN  115 (247)
Q Consensus        95 f~C~~Cgk~F~~~~~L~~H~r  115 (247)
                      ..|..||+.| ....|..|++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            4799999999 6667888865

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=87.22  E-value=0.061  Score=29.91  Aligned_cols=23  Identities=22%  Similarity=0.467  Sum_probs=17.5

Q ss_pred             cccCcCCcccCCCccccccccccC
Q 047746           95 FSCNYCRRKFYSSQALGGHQNAHK  118 (247)
Q Consensus        95 f~C~~Cgk~F~~~~~L~~H~r~Ht  118 (247)
                      |+|..|..... ...|..|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999998887 888999988753

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=85.61  E-value=1.1  Score=40.68  Aligned_cols=44  Identities=20%  Similarity=0.351  Sum_probs=38.3

Q ss_pred             CCCCC--cccccC--cCCcccCCCccccccccccCCCccccccccccC
Q 047746           88 AATVP--RVFSCN--YCRRKFYSSQALGGHQNAHKRERTMAKRAMRMG  131 (247)
Q Consensus        88 ~~tge--kpf~C~--~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg  131 (247)
                      .++++  ++|.|.  .|++.|.+...+.+|..+|++-+++.|....|.
T Consensus       313 ~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (467)
T COG5048         313 NHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSS  360 (467)
T ss_pred             ccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCc
Confidence            47788  999999  799999999999999999999998888744444

>smart00451 ZnF_U1 U1-like zinc finger

Probab=84.98  E-value=0.2  Score=30.10  Aligned_cols=23  Identities=22%  Similarity=0.525  Sum_probs=19.9

Q ss_pred             ccccCcCCcccCCCccccccccc
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNA  116 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~  116 (247)
                      +|.|.+|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999888888753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	247
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	2e-19

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 77.9 bits (192), Expect = 2e-19
 Identities = 17/34 (50%), Positives = 27/34 (79%)

Query: 92  PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK 125
           PR ++C++C+R+F S+QALGGH N H+R+R   +
Sbjct: 4   PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	247
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.74
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.72
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.66
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.63
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.63
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.62
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.62
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.62
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.6
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.59
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.58
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.57
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.55
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.55
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.54
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.54
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.53
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.53
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.53
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.5
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.49
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.49
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.48
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.48
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.47
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.47
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.46
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.46
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.45
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.45
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.44
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.43
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.41
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.41
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.4
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.39
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.39
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.39
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.38
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.34
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.34
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.33
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.32
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.32
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.31
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.3
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.28
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.28
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.26
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.26
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.24
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.23
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.23
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.22
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.21
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.19
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.18
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.16
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.16
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.16
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.15
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.15
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.15
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.14
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.14
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.14
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.13
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.13
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.11
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.1
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.09
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.08
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.03
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.02
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.02
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.01
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.0
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.0
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.98
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.97
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.96
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.96
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.96
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.96
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.95
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.95
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.95
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.95
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.94
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.94
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.94
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.94
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.94
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.93
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.93
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.92
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.92
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.91
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.91
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.91
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.9
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.89
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.89
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.89
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.88
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.88
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.88
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.87
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.86
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.86
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.86
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.85
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.84
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.83
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.83
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.82
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.81
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.8
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.79
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.78
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.74
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.73
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.73
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.71
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.7
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.69
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.68
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.68
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.68
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.66
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.66
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.63
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.62
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.61
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.6
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.59
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.59
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.59
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.56
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.53
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.53
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.51
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.51
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.5
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.49
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.48
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.4
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.74
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.36
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.71
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.35
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.35
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.33
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.33
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.33
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.33
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.32
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.31
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.29
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.24
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.24
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.24
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.24
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.23
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.23
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.22
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.22
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.21
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.2
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.16
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.15
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.12
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.11
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.1
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.37
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.03
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.01
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.97
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.95
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.9
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.89
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.87
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.87
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.09
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.82
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.01
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.75
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.73
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.71
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.71
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.66
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.63
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.62
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.45
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.13
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.13
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.76
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	93.68
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	89.7
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	89.22
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	84.0
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	83.77
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	80.95

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.74  E-value=5.8e-20  Score=146.35  Aligned_cols=92  Identities=17%  Similarity=0.181  Sum_probs=81.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      ++|+++|.|++|++.|.....|..|+++|++++||.|.                  .|++.| +...|..|+++|+|++|
T Consensus        17 h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~   78 (133)
T 2lt7_A           17 VDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCR------------------YCEKVFPLAEYRTKHEIHHTGERR   78 (133)
T ss_dssp             ETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECS------------------SSSCEESSHHHHHHHHHHHHTCCC
T ss_pred             cCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCC------------------ccCeecccccchhhhccccCCCcc
Confidence            57899999999999999999999999999999999998                  677899 89999999999999999


Q ss_pred             CCCCCCCcccccccCC-CC---------------CCCccccCCCCccccC
Q 047746          168 PQRPPDMRGGARFEQG-YF---------------AMPMFMEDDDIDLFWP  201 (247)
Q Consensus       168 y~~~~~~~cg~~f~~~-~l---------------~~P~~~~~c~~~f~~~  201 (247)
                      |.|   ..|++.|... .|               .++|.|..|++.|...
T Consensus        79 ~~C---~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           79 YQC---LACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             EEE---SSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             ccC---CCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            987   8899999874 22               1578999999887643

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.72  E-value=4e-19  Score=123.10  Aligned_cols=57  Identities=26%  Similarity=0.482  Sum_probs=53.8

Q ss_pred             CcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      ||||+|++|+|.|.....|..|+++|+|+|||.|.                  .|||.| +...|..|+|+|+||+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~------------------~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCP------------------ECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECT------------------TTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECC------------------CCCCCcCCHHHHHHHhCccCCCC
Confidence            89999999999999999999999999999999998                  677999 8999999999999985

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=4.7e-17  Score=115.89  Aligned_cols=64  Identities=25%  Similarity=0.460  Sum_probs=60.2

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      ..++++|.|.+|++.|.....|..|+++|++++||.|.                  .|++.| +...|..|+++|++++|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~L~~H~~~H~~~~p   74 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCD------------------ECGKAFIQRSHLIGHHRVHTGSGP   74 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECS------------------SSCCEESSHHHHHHHGGGSCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCC------------------CCCCccCCHHHHHHHHHHhCCCCC
Confidence            56789999999999999999999999999999999998                  677899 89999999999999999


Q ss_pred             CCC
Q 047746          168 PQR  170 (247)
Q Consensus       168 y~~  170 (247)
                      |.|
T Consensus        75 ~~C   77 (77)
T 2cot_A           75 SSG   77 (77)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            986

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.63  E-value=8.6e-18  Score=128.15  Aligned_cols=99  Identities=21%  Similarity=0.326  Sum_probs=87.2

Q ss_pred             CCCcccccCc--CCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746           90 TVPRVFSCNY--CRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus        90 tgekpf~C~~--Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      +++++|.|.+  |++.|.....|..|+++|.++++|.|..                ..|++.| ....|..|+++|++++
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------------~~C~~~f~~~~~l~~H~~~h~~~~   65 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDF----------------KDCERRFSRSDQLKRHQRRHTGVK   65 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCS----------------TTCCCEESSHHHHHHHHHHHHCCC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCC----------------CCCcCccCCHHHHHHHHHHcCCCC
Confidence            4689999997  9999999999999999999999999971                2477899 8899999999999999


Q ss_pred             CCCCCCCCcccccccCC-CC---------CCCccc--cCCCCccccCCCceec
Q 047746          167 PPQRPPDMRGGARFEQG-YF---------AMPMFM--EDDDIDLFWPGSFRQV  207 (247)
Q Consensus       167 Py~~~~~~~cg~~f~~~-~l---------~~P~~~--~~c~~~f~~~~s~~~~  207 (247)
                      ||.|   ..|++.|... .|         .+||.|  +.|++.|.....|++|
T Consensus        66 ~~~C---~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H  115 (119)
T 2jp9_A           66 PFQC---KTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH  115 (119)
T ss_dssp             CEEC---TTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHH
T ss_pred             CccC---CccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHH
Confidence            9988   7899999874 22         379999  8999999998888765

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.1e-17  Score=126.63  Aligned_cols=100  Identities=16%  Similarity=0.203  Sum_probs=87.9

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhh---cCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAM---HQG  164 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~ri---Htg  164 (247)
                      .+++++|.|.+|++.|.....|..|+++|.++++|.|.                  .|++.| +...|..|++.   |.+
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~~~~~~~   63 (124)
T 2dlq_A            2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECP------------------KCGKCYFRKENLLEHEARNCMNRS   63 (124)
T ss_dssp             CCCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCT------------------TTCCBCSSHHHHHHHHHHCCCCSC
T ss_pred             CCCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECC------------------CCCchhcCHHHHHHHHhhhhcCCC
Confidence            35688999999999999999999999999999999998                  677889 88899999985   688


Q ss_pred             CCCCCCCCCCcccccccCCC-C--------C-CCccccCCCCccccCCCceecCC
Q 047746          165 VVPPQRPPDMRGGARFEQGY-F--------A-MPMFMEDDDIDLFWPGSFRQVSE  209 (247)
Q Consensus       165 ekPy~~~~~~~cg~~f~~~~-l--------~-~P~~~~~c~~~f~~~~s~~~~~~  209 (247)
                      +++|.|   ..|++.|.... |        + +||.|..|++.|.+...|++|-.
T Consensus        64 ~~~~~C---~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           64 EQVFTC---SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             CCCEEC---SSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCeEC---CCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHH
Confidence            999987   78999998742 2        3 79999999999999999988753

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.62  E-value=3.3e-18  Score=141.49  Aligned_cols=113  Identities=19%  Similarity=0.330  Sum_probs=83.1

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCC---------------CCCCCCCCc-Cc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLA---------------SLPLHGSAF-RS  152 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s---------------~L~~hgk~F-~~  152 (247)
                      +.++++|.|.+|++.|.....|..|+++|.++++|.|.  .|+   +.|....               .+..|++.| ..
T Consensus        44 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~---~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  118 (190)
T 2i13_A           44 HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP--ECG---KSFSQRANLRAHQRTHTGEKPYACPECGKSFSQL  118 (190)
T ss_dssp             C---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECT--TTC---CEESCHHHHHHHHHHHHTCCCEECTTTCCEESSH
T ss_pred             cCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCc--ccC---CccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCH
Confidence            44567788888888888888888888888888888887  777   6664433               235568888 77


Q ss_pred             hhHHHHhhhcCCCCCCCCCCCCcccccccCC-CC---------CCCccccCCCCccccCCCceecCC
Q 047746          153 LGIKAHAAMHQGVVPPQRPPDMRGGARFEQG-YF---------AMPMFMEDDDIDLFWPGSFRQVSE  209 (247)
Q Consensus       153 ~~L~~H~riHtgekPy~~~~~~~cg~~f~~~-~l---------~~P~~~~~c~~~f~~~~s~~~~~~  209 (247)
                      ..|..|+++|++++||.|   ..|++.|... .|         .+||.|..|++.|.+...|+.|-.
T Consensus       119 ~~l~~H~~~h~~~~~~~C---~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~  182 (190)
T 2i13_A          119 AHLRAHQRTHTGEKPYKC---PECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR  182 (190)
T ss_dssp             HHHHHHHHHHHCCCCEEC---TTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCeEC---CCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            788888888888888877   6788888763 22         278888888888888888887754

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.62  E-value=8.4e-17  Score=113.73  Aligned_cols=63  Identities=24%  Similarity=0.534  Sum_probs=58.9

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      ...++++|+|.+|++.|.....|..|+++|+++++|.|.                  .|++.| +...|..|+++|+++|
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCN------------------ICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECT------------------TTCCEESCHHHHHHHHHHHCCSC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECC------------------CCCchhCCHHHHHHHHHhcCCCC
Confidence            367789999999999999999999999999999999998                  677899 8999999999999999


Q ss_pred             CC
Q 047746          167 PP  168 (247)
Q Consensus       167 Py  168 (247)
                      ||
T Consensus        73 p~   74 (74)
T 2lce_A           73 PY   74 (74)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=1e-16  Score=114.00  Aligned_cols=74  Identities=20%  Similarity=0.357  Sum_probs=65.7

Q ss_pred             CCCCcccccCc--CCcccCCCcccccccc-ccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746           89 ATVPRVFSCNY--CRRKFYSSQALGGHQN-AHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus        89 ~tgekpf~C~~--Cgk~F~~~~~L~~H~r-~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      .+++++|.|..  |++.|.....|..|++ +|+++++|.|.  .              +.|++.| +...|..|+++|++
T Consensus         2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~--~--------------~~C~k~f~~~~~L~~H~~~H~~   65 (79)
T 2dlk_A            2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCP--E--------------PACGKSFNFKKHLKEHMKLHSD   65 (79)
T ss_dssp             CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECS--C--------------TTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECC--C--------------CCCcCccCCHHHHHHHHHHhCC
Confidence            35688999997  9999999999999999 79999999998  1              1277899 89999999999999


Q ss_pred             CCCCCCCCCCccccccc
Q 047746          165 VVPPQRPPDMRGGARFE  181 (247)
Q Consensus       165 ekPy~~~~~~~cg~~f~  181 (247)
                      ++||.|   ..|++.|.
T Consensus        66 ~~~~~C---~~C~k~F~   79 (79)
T 2dlk_A           66 TRDYIC---EFSGPSSG   79 (79)
T ss_dssp             SCCCSC---CSSSCCCC
T ss_pred             CCCeeC---CCCCCCCC
Confidence            999987   78999884

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.60  E-value=1.3e-17  Score=137.89  Aligned_cols=113  Identities=19%  Similarity=0.326  Sum_probs=81.5

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCC---------------CCCCCCCCc-Cc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLA---------------SLPLHGSAF-RS  152 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s---------------~L~~hgk~F-~~  152 (247)
                      +.++++|.|.+|++.|.....|..|+++|.++++|.|.  .|+   +.|....               .+..|++.| ..
T Consensus        16 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~---~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   90 (190)
T 2i13_A           16 EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCP--ECG---KSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQR   90 (190)
T ss_dssp             ---------------CCSSHHHHHGGGCC---CCEECT--TTC---CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCH
T ss_pred             cCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCC--CcC---chhCCHHHHHHHHHhcCCCCCccCcccCCccCCH
Confidence            56789999999999999999999999999999999999  899   7776533               245679999 88


Q ss_pred             hhHHHHhhhcCCCCCCCCCCCCcccccccCCC-C---------CCCccccCCCCccccCCCceecCC
Q 047746          153 LGIKAHAAMHQGVVPPQRPPDMRGGARFEQGY-F---------AMPMFMEDDDIDLFWPGSFRQVSE  209 (247)
Q Consensus       153 ~~L~~H~riHtgekPy~~~~~~~cg~~f~~~~-l---------~~P~~~~~c~~~f~~~~s~~~~~~  209 (247)
                      ..|..|+++|.+++||.|   ..|++.|.... |         .+||.|..|++.|.+...|+.|-.
T Consensus        91 ~~l~~H~~~h~~~~~~~C---~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  154 (190)
T 2i13_A           91 ANLRAHQRTHTGEKPYAC---PECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR  154 (190)
T ss_dssp             HHHHHHHHHHHTCCCEEC---TTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCcC---CCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            999999999999999987   78999998742 2         379999999999999998888743

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.59  E-value=1.8e-16  Score=121.91  Aligned_cols=98  Identities=23%  Similarity=0.337  Sum_probs=83.9

Q ss_pred             CcccccC--cCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCC
Q 047746           92 PRVFSCN--YCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPP  168 (247)
Q Consensus        92 ekpf~C~--~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy  168 (247)
                      +++|.|.  .|++.|.....|..|+++| ++++|.|.                  .|++.| ....|..|+++|++++||
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~------------------~C~~~f~~~~~l~~H~~~h~~~~~~   63 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCA------------------ECGKAFVESSKLKRHQLVHTGEKPF   63 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECT------------------TTCCEESSHHHHHHHGGGTSCCCCE
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECC------------------CCCchhCCHHHHHHHHHHcCCCCCe
Confidence            5789999  8999999999999999999 89999998                  677889 888999999999999999


Q ss_pred             CCCCCCcccccccCC-CC---------CCCccc--cCCCCccccCCCceecCC
Q 047746          169 QRPPDMRGGARFEQG-YF---------AMPMFM--EDDDIDLFWPGSFRQVSE  209 (247)
Q Consensus       169 ~~~~~~~cg~~f~~~-~l---------~~P~~~--~~c~~~f~~~~s~~~~~~  209 (247)
                      .| +...|++.|... .|         .+||.|  +.|++.|.+...|+.|-.
T Consensus        64 ~C-~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  115 (124)
T 1ubd_C           64 QC-TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL  115 (124)
T ss_dssp             EC-CSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHH
T ss_pred             eC-CCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHH
Confidence            98 223599999874 22         379999  579999999999998743

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.58  E-value=1.2e-15  Score=114.28  Aligned_cols=73  Identities=27%  Similarity=0.432  Sum_probs=65.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      ...+++|.|.+|++.|.....|..|+++|+++++|.|.                  .|++.| ....|..|+++|++++|
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~h~~~~~   73 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCD------------------ICHKAFRRQDHLRDHRYIHSKEKP   73 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCS------------------SSCCBCSCHHHHHHHGGGSCCCCT
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC------------------CccchhCCHHHHHHHHHHhCCCCC
Confidence            45688999999999999999999999999999999998                  677889 78899999999999999


Q ss_pred             CCCCCCCcccccccC
Q 047746          168 PQRPPDMRGGARFEQ  182 (247)
Q Consensus       168 y~~~~~~~cg~~f~~  182 (247)
                      |.|   ..|++.|..
T Consensus        74 ~~C---~~C~~~f~~   85 (106)
T 2ee8_A           74 FKC---QECGKGFCQ   85 (106)
T ss_dssp             TSC---SSSCCCCSS
T ss_pred             eEC---CCcCCcccC
Confidence            987   677887765

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=7.5e-16  Score=122.70  Aligned_cols=40  Identities=18%  Similarity=0.171  Sum_probs=31.6

Q ss_pred             CcccccCcCCcccCCCcccccccc---ccCCCccccccccccC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQN---AHKRERTMAKRAMRMG  131 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r---~Htgekp~~C~~~~Cg  131 (247)
                      |.+|.|..|++.|.+...|..|++   +|.++++|.|..+.|+
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~   43 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCS   43 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCT
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCcc
Confidence            456888888888888888888887   7888888888754454

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.55  E-value=1.9e-16  Score=130.83  Aligned_cols=113  Identities=19%  Similarity=0.166  Sum_probs=69.1

Q ss_pred             CCCccccc--CcCCcccCCCccccccccccCCCccccccccccCcccccccCC----------C-------CC--CCCCC
Q 047746           90 TVPRVFSC--NYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSL----------A-------SL--PLHGS  148 (247)
Q Consensus        90 tgekpf~C--~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~----------s-------~L--~~hgk  148 (247)
                      +++++|.|  .+|++.|.....|..|+++|.++++|.|....|+   +.|...          +       .+  ..|++
T Consensus        38 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~---~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k  114 (190)
T 1tf6_A           38 TGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCD---LRFTTKANMKKHFNRFHNIKICVYVCHFENCGK  114 (190)
T ss_dssp             HCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCC---CEESCHHHHHHHHHTTSSTTTSCCEECSSSSCE
T ss_pred             CCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCC---CccCCHHHHHHHHHHhcCCCcceeeCCCCCCcc
Confidence            34566777  6677777777777777777777777777633465   444311          1       11  44677


Q ss_pred             Cc-CchhHHHHhhhcCCCCCCCCCCCCc--ccccccCC-CC----C--CCccccC---CCCccccCCCceecC
Q 047746          149 AF-RSLGIKAHAAMHQGVVPPQRPPDMR--GGARFEQG-YF----A--MPMFMED---DDIDLFWPGSFRQVS  208 (247)
Q Consensus       149 ~F-~~~~L~~H~riHtgekPy~~~~~~~--cg~~f~~~-~l----~--~P~~~~~---c~~~f~~~~s~~~~~  208 (247)
                      .| ....|..|+++|++++||.|   ..  |++.|... .|    .  ..|.|..   |++.|.....|+.|-
T Consensus       115 ~f~~~~~L~~H~~~H~~~~~~~C---~~~~C~k~F~~~~~L~~H~~~H~~~~C~~~~~C~~~f~~~~~l~~H~  184 (190)
T 1tf6_A          115 AFKKHNQLKVHQFSHTQQLPYEC---PHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHV  184 (190)
T ss_dssp             ECSSHHHHHHHHGGGSSSCSSBC---CSSSCCCBCSSHHHHHHHHTSSCSCCCCSTTTCCCCCSCHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhCCCCCccC---CCCCCCchhcCHHHHHHHHHHhCCCcCCCCCcCCCccccHHHHHHHH
Confidence            77 66677777777777777766   33  77777653 11    0  1266666   777777666666553

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.9e-15  Score=110.95  Aligned_cols=73  Identities=22%  Similarity=0.356  Sum_probs=62.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC--
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV--  165 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge--  165 (247)
                      .+++++|.|.+|++.|.....|..|+++|+++++|.|.                  .|++.| +...|..|+++|+++  
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~h~~~~~   63 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCP------------------VCGLRFKRKDRMSYHVRSHDGSVG   63 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECS------------------SSCCEESCHHHHHHHHHHHCCCCC
T ss_pred             CCCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCC------------------CCCCccCCHHHHHHHHHHhcCCCC
Confidence            35689999999999999999999999999999999998                  677889 889999999999987  


Q ss_pred             CCCCCCCCCcccccccC
Q 047746          166 VPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       166 kPy~~~~~~~cg~~f~~  182 (247)
                      +||.|   ..|++.|..
T Consensus        64 ~~~~C---~~C~~~f~~   77 (95)
T 2yt9_A           64 KPYIC---QSCGKGFSR   77 (95)
T ss_dssp             SSBCC---SSSCCCBSS
T ss_pred             CceEC---CCccchhCC
Confidence            77765   455555543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.7e-15  Score=111.35  Aligned_cols=73  Identities=15%  Similarity=0.169  Sum_probs=64.9

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      ..++++|.|.+|++.|.....|..|+++|.++++|.|.                  .|++.| ....|..|+++|++++|
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~h~~~~~   64 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCK------------------TCDYAAADSSSLNKHLRIHSDERP   64 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECS------------------SSCCEESSHHHHHHHHHHSCCCCC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCC------------------CCCCccCCHHHHHHHHHHhCCCCC
Confidence            35588999999999999999999999999999999998                  677889 88899999999999999


Q ss_pred             CCCCCCCcccccccC
Q 047746          168 PQRPPDMRGGARFEQ  182 (247)
Q Consensus       168 y~~~~~~~cg~~f~~  182 (247)
                      |.|   ..|++.|..
T Consensus        65 ~~C---~~C~~~f~~   76 (96)
T 2dmd_A           65 FKC---QICPYASRN   76 (96)
T ss_dssp             EEC---SSSSCEESS
T ss_pred             ccC---CCCCCccCC
Confidence            876   567777765

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.2e-15  Score=115.20  Aligned_cols=73  Identities=19%  Similarity=0.353  Sum_probs=66.3

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .++++++|.| +|++.|.....|..|+++|.++++|.|.                  .|++.| +...|..|+++|++++
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~h~~~~   64 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCG------------------VCGKKFKMKHHLVGHMKIHTGIK   64 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECT------------------TTSCEESSSHHHHHHHTTTCCCC
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCC------------------CCCcccCCHHHHHHHHHHcCCCC
Confidence            4788999999 9999999999999999999999999998                  677889 8899999999999999


Q ss_pred             CCCCCCCCcccccccC
Q 047746          167 PPQRPPDMRGGARFEQ  182 (247)
Q Consensus       167 Py~~~~~~~cg~~f~~  182 (247)
                      ||.|   ..|++.|..
T Consensus        65 ~~~C---~~C~~~f~~   77 (110)
T 2csh_A           65 PYEC---NICAKRFMW   77 (110)
T ss_dssp             CEEC---SSSCCEESC
T ss_pred             CeeC---CCCcchhcC
Confidence            9977   667777765

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.7e-15  Score=105.81  Aligned_cols=62  Identities=16%  Similarity=0.193  Sum_probs=58.4

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      ++++++|.|.+|++.|.....|..|+++|+++++|.|.                  .|++.| +...|..|+++|++++|
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~------------------~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCN------------------YCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECS------------------SSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCC------------------CCCCccCCHHHHHHHHHHHhCCCC
Confidence            67789999999999999999999999999999999998                  677899 89999999999999998


Q ss_pred             C
Q 047746          168 P  168 (247)
Q Consensus       168 y  168 (247)
                      .
T Consensus        66 ~   66 (70)
T 1x5w_A           66 G   66 (70)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.53  E-value=8.9e-16  Score=122.27  Aligned_cols=103  Identities=18%  Similarity=0.159  Sum_probs=85.3

Q ss_pred             CCCCcccccCc-----CCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhc
Q 047746           89 ATVPRVFSCNY-----CRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMH  162 (247)
Q Consensus        89 ~tgekpf~C~~-----Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riH  162 (247)
                      +.++++|.|.+     |++.|.....|..|+++|++++||.|..                ..|++.| ....|..|+++|
T Consensus        29 h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~----------------~~C~~~f~~~~~l~~H~~~h   92 (155)
T 2gli_A           29 HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTF----------------EGCRKSYSRLENLKTHLRSH   92 (155)
T ss_dssp             SSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCS----------------TTCCCCCSSHHHHHHHHHHT
T ss_pred             CCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCC----------------CCCCCcccCHHHHHHHHHHc
Confidence            45678898875     3499999999999999999999999971                1377999 889999999999


Q ss_pred             CCCCCCCCCCCCcccccccCC-CC---------C-CCccccC--CCCccccCCCceecC
Q 047746          163 QGVVPPQRPPDMRGGARFEQG-YF---------A-MPMFMED--DDIDLFWPGSFRQVS  208 (247)
Q Consensus       163 tgekPy~~~~~~~cg~~f~~~-~l---------~-~P~~~~~--c~~~f~~~~s~~~~~  208 (247)
                      ++++||.| +...|++.|... .|         + +||.|..  |++.|.....|+.|-
T Consensus        93 ~~~~~~~C-~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~  150 (155)
T 2gli_A           93 TGEKPYMC-EHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV  150 (155)
T ss_dssp             TTCCCEEC-CSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHH
T ss_pred             CCCCCeeC-CCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHH
Confidence            99999998 212399999874 22         2 7999988  999999999888764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=6.8e-16  Score=117.75  Aligned_cols=64  Identities=16%  Similarity=0.147  Sum_probs=58.9

Q ss_pred             CCCCcccccCcCCcccCCCcccccccc-cc---CCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHH-hhhc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQN-AH---KRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAH-AAMH  162 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r-~H---tgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H-~riH  162 (247)
                      .+|++||.|.+|++.|.....|..|++ +|   ++++||.|.                  .|||.| +...|..| +++|
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~------------------~Cgk~F~~~~~L~~H~~r~H   74 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCV------------------ECNFLTKRYDALSEHNLKYH   74 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEET------------------TTTEEESSTHHHHTHHHHTS
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCC------------------CCCcccCCHHHHHHHHHHhc
Confidence            578999999999999999999999998 59   679999998                  677899 89999999 8999


Q ss_pred             CCCCCCCC
Q 047746          163 QGVVPPQR  170 (247)
Q Consensus       163 tgekPy~~  170 (247)
                      +|||||.|
T Consensus        75 tgekpy~C   82 (102)
T 2ghf_A           75 PGEENFKL   82 (102)
T ss_dssp             TTCCCEEE
T ss_pred             CCCCCeeC
Confidence            99999988

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.50  E-value=7.8e-15  Score=117.12  Aligned_cols=109  Identities=17%  Similarity=0.123  Sum_probs=86.1

Q ss_pred             CCCcccccCcCCcccCCCccccccccc-cCCCccc---cccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746           90 TVPRVFSCNYCRRKFYSSQALGGHQNA-HKRERTM---AKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus        90 tgekpf~C~~Cgk~F~~~~~L~~H~r~-Htgekp~---~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      ..+++|.|.+|++.|.....|..|+++ |.++++.   .|....|.             .|++.| ....|..|+++|++
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~-------------~C~~~f~~~~~l~~H~~~h~~   87 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP-------------REGKSFKAKYKLVNHIRVHTG   87 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCT-------------TSSCCCSSHHHHHHHTHHHHC
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCC-------------CcccccCCHHHHHHHHHhcCC
Confidence            456789999999999999999999997 8887652   12111222             788999 88899999999999


Q ss_pred             CCCCCCCCCCcccccccCC-CC--------C-CCccccC--CCCccccCCCceecCCCCC
Q 047746          165 VVPPQRPPDMRGGARFEQG-YF--------A-MPMFMED--DDIDLFWPGSFRQVSEAVR  212 (247)
Q Consensus       165 ekPy~~~~~~~cg~~f~~~-~l--------~-~P~~~~~--c~~~f~~~~s~~~~~~~~~  212 (247)
                      ++||.| ....|++.|... .|        + +||.|..  |++.|.+...|++|-....
T Consensus        88 ~~~~~C-~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~  146 (155)
T 2rpc_A           88 EKPFPC-PFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT  146 (155)
T ss_dssp             CCSEEC-SCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTT
T ss_pred             CCcccC-CcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhc
Confidence            999998 222399999873 21        3 7999995  9999999999998865443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=6.2e-15  Score=103.59  Aligned_cols=62  Identities=24%  Similarity=0.387  Sum_probs=57.4

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .++++++|.|.+|++.|.....|..|+++|++++||.|.                  .|++.| +...|..|+++|+++.
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCL------------------ECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECS------------------SSCCEESSHHHHHHHHHHHHSSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECC------------------CCCcccCCHHHHHHHHHhcCCCC
Confidence            378899999999999999999999999999999999998                  677899 8999999999999875


Q ss_pred             C
Q 047746          167 P  167 (247)
Q Consensus       167 P  167 (247)
                      +
T Consensus        70 ~   70 (72)
T 1x6e_A           70 S   70 (72)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.49  E-value=1.2e-15  Score=125.94  Aligned_cols=119  Identities=16%  Similarity=0.203  Sum_probs=92.4

Q ss_pred             CCCccccc--CcCCcccCCCccccccccccCCCccccccccccCcccccccCCCC---------------CC--CCCCCc
Q 047746           90 TVPRVFSC--NYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLAS---------------LP--LHGSAF  150 (247)
Q Consensus        90 tgekpf~C--~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~---------------L~--~hgk~F  150 (247)
                      ..+++|.|  ..|++.|.....|..|+++|+++++|.|....|+   +.|.....               +.  .|++.|
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~---~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f   84 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCE---KGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRF   84 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCC---CCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEE
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCC---hhhCCHHHHHHHHHHccCCCceeCCCCCCCCcc
Confidence            45789999  6899999999999999999999999999322788   66654322               23  688889


Q ss_pred             -CchhHHHHh-hhc-CCCCCCCCCCCCcccccccCC-CC--------C-CCccccC--CCCccccCCCceecCCCCC
Q 047746          151 -RSLGIKAHA-AMH-QGVVPPQRPPDMRGGARFEQG-YF--------A-MPMFMED--DDIDLFWPGSFRQVSEAVR  212 (247)
Q Consensus       151 -~~~~L~~H~-riH-tgekPy~~~~~~~cg~~f~~~-~l--------~-~P~~~~~--c~~~f~~~~s~~~~~~~~~  212 (247)
                       ....|..|+ ++| .++++|.| +...|++.|... .|        + +||.|..  |++.|.+...|+.|-....
T Consensus        85 ~~~~~l~~H~~~~h~~~~~~~~C-~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~  160 (190)
T 1tf6_A           85 TTKANMKKHFNRFHNIKICVYVC-HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA  160 (190)
T ss_dssp             SCHHHHHHHHHTTSSTTTSCCEE-CSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSC
T ss_pred             CCHHHHHHHHHHhcCCCcceeeC-CCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhC
Confidence             788999998 677 57888876 446789999873 22        2 7899977  9999999999988865433

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.48  E-value=1.3e-14  Score=107.21  Aligned_cols=75  Identities=24%  Similarity=0.325  Sum_probs=65.5

Q ss_pred             CCCCcccccCc--CCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746           89 ATVPRVFSCNY--CRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus        89 ~tgekpf~C~~--Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      ...+++|.|.+  |++.|.....|..|+++|.++++|.|..                ..|++.| ....|..|+++|+++
T Consensus        10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------------~~C~~~f~~~~~l~~H~~~h~~~   73 (100)
T 2ebt_A           10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTW----------------EGCDWRFARSDELTRHYRKHTGA   73 (100)
T ss_dssp             CCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCS----------------SSCCCEESSHHHHHHHHHHHTSC
T ss_pred             cccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCC----------------CCCCCccCCHHHHHHHHHHhCCC
Confidence            34578999997  9999999999999999999999999961                1477889 889999999999999


Q ss_pred             CCCCCCCCCcccccccC
Q 047746          166 VPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       166 kPy~~~~~~~cg~~f~~  182 (247)
                      +||.|   ..|++.|..
T Consensus        74 ~~~~C---~~C~~~f~~   87 (100)
T 2ebt_A           74 KPFQC---GVCNRSFSR   87 (100)
T ss_dssp             CSCBC---SSSCCBCSS
T ss_pred             CCeEC---CCCcCccCC
Confidence            99987   678888865

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.48  E-value=3.8e-15  Score=118.35  Aligned_cols=76  Identities=16%  Similarity=0.198  Sum_probs=66.5

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      ++++++|.|++|++.|.....|..|+++|++++||.|.                  .||+.| +...|..|+++|++++|
T Consensus        45 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~hh~~~p  106 (133)
T 2lt7_A           45 HSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCL------------------ACGKSFINYQFMSSHIKSVHSQDP  106 (133)
T ss_dssp             HHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEES------------------SSCCEESSHHHHHHHHHHHTCCCT
T ss_pred             cCCCCCeeCCccCeecccccchhhhccccCCCccccCC------------------CCCCCcCCHHHHHHHhHHhcCCCC
Confidence            56789999999999999999999999999999999998                  677999 89999999999999988


Q ss_pred             CCCC---CCCcccccccC
Q 047746          168 PQRP---PDMRGGARFEQ  182 (247)
Q Consensus       168 y~~~---~~~~cg~~f~~  182 (247)
                      +.+.   .|..|++.|..
T Consensus       107 ~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A          107 SGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             TSSSCCEEECCCCSSCCC
T ss_pred             CCCCCCeecCCCCchhhh
Confidence            6542   24678887765

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.47  E-value=3.7e-15  Score=108.11  Aligned_cols=71  Identities=27%  Similarity=0.457  Sum_probs=62.7

Q ss_pred             CCcccccC--cCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           91 VPRVFSCN--YCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        91 gekpf~C~--~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      ++++|.|.  .|++.|.....|..|+++|.++++|.|.                  .|++.| ....|..|+++|++++|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~h~~~~~   62 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCR------------------ICMRNFSRSDHLTTHIRTHTGEKP   62 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECT------------------TTCCEESCHHHHHHHHHHHHCCCC
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCC------------------CCCcccCCHHHHHHHHHHcCCCCC
Confidence            47899998  5999999999999999999999999998                  677889 88999999999999999


Q ss_pred             CCCCCCCcccccccC
Q 047746          168 PQRPPDMRGGARFEQ  182 (247)
Q Consensus       168 y~~~~~~~cg~~f~~  182 (247)
                      |.|   ..|++.|..
T Consensus        63 ~~C---~~C~~~f~~   74 (90)
T 1a1h_A           63 FAC---DICGRKFAR   74 (90)
T ss_dssp             EEC---TTTCCEESS
T ss_pred             ccC---CCCCchhCC
Confidence            977   667777765

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=1.6e-14  Score=103.77  Aligned_cols=71  Identities=20%  Similarity=0.263  Sum_probs=62.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCC----ccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRE----RTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htge----kp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHt  163 (247)
                      ++++++|.|.+|++.|.....|..|+++|..+    ++|.|.                  .|++.| +...|..|+++|+
T Consensus        10 H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~------------------~C~~~f~~~~~L~~H~~~h~   71 (86)
T 1x6h_A           10 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS------------------KCGKTFTRRNTMARHADNCA   71 (86)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECS------------------SSCCEESCHHHHHHHHHHCC
T ss_pred             ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECC------------------CCCChhCCHHHHHHHHHHcc
Confidence            77899999999999999999999999877765    799998                  677899 8999999999999


Q ss_pred             CCCCCCCCCCCcccccc
Q 047746          164 GVVPPQRPPDMRGGARF  180 (247)
Q Consensus       164 gekPy~~~~~~~cg~~f  180 (247)
                      +++++.|   ..|+..|
T Consensus        72 ~~~~~~~---~~~~~~~   85 (86)
T 1x6h_A           72 GPDGVEG---ENSGPSS   85 (86)
T ss_dssp             CCCSCCC---CCCCCCC
T ss_pred             CCCCccc---CCCCCCC
Confidence            9999987   6666655

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=1.2e-14  Score=108.57  Aligned_cols=63  Identities=13%  Similarity=0.207  Sum_probs=59.2

Q ss_pred             CCCCcccccCcCCcccC-CCccccccccccCC-CccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746           89 ATVPRVFSCNYCRRKFY-SSQALGGHQNAHKR-ERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~-~~~~L~~H~r~Htg-ekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      ++++++|.|.+|++.|. ....|..|+++|++ +++|.|.                  .|+|.| +...|..|+++|+++
T Consensus        19 h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~------------------~C~k~F~~~~~L~~H~~~h~~~   80 (98)
T 2gqj_A           19 IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQ------------------HCRKQFKSKAGLNYHTMAEHSA   80 (98)
T ss_dssp             TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCS------------------SSCCCCSCHHHHHHHHHHHSCS
T ss_pred             hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECC------------------CCCCccCCHHHHHHHHHHHcCC
Confidence            67899999999999999 99999999999999 9999998                  677999 899999999999999


Q ss_pred             CCCC
Q 047746          166 VPPQ  169 (247)
Q Consensus       166 kPy~  169 (247)
                      +|+.
T Consensus        81 kp~~   84 (98)
T 2gqj_A           81 KPSD   84 (98)
T ss_dssp             CSSC
T ss_pred             CCCC
Confidence            9975

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.46  E-value=5e-15  Score=105.40  Aligned_cols=68  Identities=28%  Similarity=0.496  Sum_probs=62.1

Q ss_pred             ccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPP  172 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~  172 (247)
                      ||.|.+|++.|.....|..|+++|.++++|.|.                  .|++.| ....|..|+++|++++||.|  
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~h~~~~~~~C--   60 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQ------------------YCGKRFHQKSDMKKHTFIHTGEKPHKC--   60 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECS------------------SSCCEESSHHHHHHHHHHHHTCCCEEC--
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCC------------------cCChhhCCHHHHHHHHHHhcCCCCCcC--
Confidence            599999999999999999999999999999998                  677889 88999999999999999987  


Q ss_pred             CCcccccccC
Q 047746          173 DMRGGARFEQ  182 (247)
Q Consensus       173 ~~~cg~~f~~  182 (247)
                       ..|++.|..
T Consensus        61 -~~C~~~f~~   69 (82)
T 2kmk_A           61 -QVCGKAFSQ   69 (82)
T ss_dssp             -TTTSCEESS
T ss_pred             -CCcchhhCC
Confidence             678888765

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.45  E-value=2.3e-14  Score=110.03  Aligned_cols=76  Identities=28%  Similarity=0.423  Sum_probs=67.0

Q ss_pred             CCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCC
Q 047746           91 VPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQ  169 (247)
Q Consensus        91 gekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~  169 (247)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|..                ..|++.| +...|..|+++|++++||.
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------------~~C~~~f~~~~~l~~H~~~h~~~~~~~   94 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF----------------EGCGKRFSLDFNLRTHVRIHTGDRPYV   94 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCS----------------TTCCCEESCHHHHHHHHHHHHCCCCCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCC----------------CCCcCccCCHHHHHHHHHHhCCCCceE
Confidence            4688999999999999999999999999999999971                1377899 8899999999999999999


Q ss_pred             CCCCCcccccccCC
Q 047746          170 RPPDMRGGARFEQG  183 (247)
Q Consensus       170 ~~~~~~cg~~f~~~  183 (247)
                      | +...|++.|...
T Consensus        95 C-~~~~C~~~f~~~  107 (124)
T 1ubd_C           95 C-PFDGCNKKFAQS  107 (124)
T ss_dssp             C-CSTTCCCCCSST
T ss_pred             C-CCCCCCCccCCH
Confidence            8 324699999874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.45  E-value=2.5e-14  Score=105.49  Aligned_cols=60  Identities=18%  Similarity=0.280  Sum_probs=54.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHh-hhcCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHA-AMHQGVV  166 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~-riHtgek  166 (247)
                      +...++|.|++|+|.|.....|..|+++|+++|||.|.                  .|+|.| +...|.+|+ ++|++|.
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCK------------------YCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECT------------------TSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCC------------------CCCCEeCCHHHHHHhCcccCcCCC
Confidence            45578999999999999999999999999999999998                  677999 899999996 6899875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.6e-14  Score=108.75  Aligned_cols=71  Identities=14%  Similarity=0.176  Sum_probs=61.1

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .++++++|.|.+|++.|.....|..|+++|  +++|.|.                  .|++.| ....|..|++ |++++
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~------------------~C~~~f~~~~~l~~H~~-H~~~~   68 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCP------------------YCSLRFFSPELKQEHES-KCEYK   68 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCT------------------TTCCCBSSHHHHHHHHH-HCSTG
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCC------------------CCCCccCCHHHHHHHHH-cCCCC
Confidence            367899999999999999999999999999  5799998                  667888 7889999996 99998


Q ss_pred             CCCCCCCCcccccccC
Q 047746          167 PPQRPPDMRGGARFEQ  182 (247)
Q Consensus       167 Py~~~~~~~cg~~f~~  182 (247)
                      ||.|   ..|++.|..
T Consensus        69 ~~~C---~~C~~~f~~   81 (107)
T 1wjp_A           69 KLTC---LECMRTFKS   81 (107)
T ss_dssp             GGEE---GGGTEECSS
T ss_pred             CccC---ccccchhCC
Confidence            8876   667777765

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.43  E-value=5e-14  Score=105.41  Aligned_cols=64  Identities=23%  Similarity=0.503  Sum_probs=59.3

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      +.++++|.|.+|++.|.....|..|+++|+++++|.|.                  .|++.| +...|..|+++|++++|
T Consensus        40 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~L~~H~~~H~~~~~  101 (106)
T 2ee8_A           40 HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ------------------ECGKGFCQSRTLAVHKTLHMQTSS  101 (106)
T ss_dssp             HCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCS------------------SSCCCCSSHHHHHHHHHHTTSCCC
T ss_pred             cCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECC------------------CcCCcccCHHHHHHHHHHhCCCCC
Confidence            45678999999999999999999999999999999998                  677899 89999999999999999


Q ss_pred             CCC
Q 047746          168 PQR  170 (247)
Q Consensus       168 y~~  170 (247)
                      |.+
T Consensus       102 ~~~  104 (106)
T 2ee8_A          102 PTA  104 (106)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            964

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.41  E-value=1.3e-14  Score=110.34  Aligned_cols=75  Identities=25%  Similarity=0.383  Sum_probs=67.4

Q ss_pred             CCCCcccccC--cCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746           89 ATVPRVFSCN--YCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus        89 ~tgekpf~C~--~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      +.++++|.|.  .|++.|.....|..|+++|+++++|.|.                  .|++.| +...|..|+++|+++
T Consensus        31 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~h~~~   92 (119)
T 2jp9_A           31 HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK------------------TCQRKFSRSDHLKTHTRTHTGE   92 (119)
T ss_dssp             HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECT------------------TTCCEESCHHHHHHHHHHHHTC
T ss_pred             hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCC------------------ccCchhCCHHHHHHHHHHhcCC
Confidence            3457899999  7999999999999999999999999998                  677899 889999999999999


Q ss_pred             CCCCCCCCCcccccccC
Q 047746          166 VPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       166 kPy~~~~~~~cg~~f~~  182 (247)
                      +||.| .+..|++.|..
T Consensus        93 ~~~~C-~~~~C~~~f~~  108 (119)
T 2jp9_A           93 KPFSC-RWPSCQKKFAR  108 (119)
T ss_dssp             CCEEC-CSTTCCCEESS
T ss_pred             CCeeC-CCCCCccccCC
Confidence            99987 43679999976

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.41  E-value=3.3e-14  Score=102.82  Aligned_cols=72  Identities=25%  Similarity=0.385  Sum_probs=63.8

Q ss_pred             CcccccCc--CCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCC
Q 047746           92 PRVFSCNY--CRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPP  168 (247)
Q Consensus        92 ekpf~C~~--Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy  168 (247)
                      .++|.|.+  |++.|.....|..|+++|.++++|.|..                ..|++.| ....|..|+++|++++||
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------------~~C~~~f~~~~~l~~H~~~h~~~~~~   66 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDW----------------DGCGWKFARSDELTRHYRKHTGHRPF   66 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCS----------------TTTCCEESSHHHHHHHHHHHHCCCCE
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCC----------------CCCCCccCCHHHHHHHHHHcCCCCCc
Confidence            56799999  9999999999999999999999999961                1477899 889999999999999999


Q ss_pred             CCCCCCcccccccC
Q 047746          169 QRPPDMRGGARFEQ  182 (247)
Q Consensus       169 ~~~~~~~cg~~f~~  182 (247)
                      .|   ..|++.|..
T Consensus        67 ~C---~~C~~~f~~   77 (89)
T 2wbs_A           67 QC---QKCDRAFSR   77 (89)
T ss_dssp             EC---SSSSCEESS
T ss_pred             cC---CCCCcccCC
Confidence            87   678888865

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=3.4e-14  Score=108.04  Aligned_cols=73  Identities=19%  Similarity=0.246  Sum_probs=39.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccc--cCCCcccc-ccccccCcccccccCCCCCCCCCCCc---CchhHHHHhhhc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNA--HKRERTMA-KRAMRMGIFSDRYTSLASLPLHGSAF---RSLGIKAHAAMH  162 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~--Htgekp~~-C~~~~Cg~~~k~F~~~s~L~~hgk~F---~~~~L~~H~riH  162 (247)
                      ++++++|.|.+|++.|.....|..|+++  |.+++++. |.                  .|++.|   +...|..|+++|
T Consensus        14 H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~------------------~C~~~f~f~~~~~l~~H~~~H   75 (115)
T 2dmi_A           14 FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDN------------------NNPKRWSKPRKRSLLEMEGKE   75 (115)
T ss_dssp             CCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCC------------------CCCSCCSSCCCCCCCCCCCSC
T ss_pred             eCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCC------------------CCCcccccccHHHHHHHhhcc
Confidence            4455666666666666666666666665  55555443 44                  233333   344555666666


Q ss_pred             CCCCCCCCCCCCcccccccC
Q 047746          163 QGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       163 tgekPy~~~~~~~cg~~f~~  182 (247)
                      ++++||.|   ..|++.|..
T Consensus        76 ~~~~~~~C---~~C~k~f~~   92 (115)
T 2dmi_A           76 DAQKVLKC---MYCGHSFES   92 (115)
T ss_dssp             CCCSSCBC---SSSCCBCSS
T ss_pred             CCCcceEC---CCCCCccCC
Confidence            66666554   444444443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=4.6e-14  Score=100.32  Aligned_cols=64  Identities=17%  Similarity=0.311  Sum_probs=58.1

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCC---CccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHh-hhcC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKR---ERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHA-AMHQ  163 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htg---ekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~-riHt  163 (247)
                      ++++++|.|.+|++.|.....|..|+++|++   +++|.|.                  .|++.| +...|..|+ +.|.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCE------------------FCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECT------------------TTCCEESSHHHHHHHHHHTST
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCC------------------CCCchhCCHHHHHHHHHHhCC
Confidence            6789999999999999999999999999996   8999998                  677899 899999999 5799


Q ss_pred             CCCCCCC
Q 047746          164 GVVPPQR  170 (247)
Q Consensus       164 gekPy~~  170 (247)
                      +++|+..
T Consensus        64 ~~~~~~~   70 (78)
T 2d9h_A           64 ALLLAPQ   70 (78)
T ss_dssp             TTSSCCS
T ss_pred             CCCCCcc
Confidence            9988753

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.39  E-value=3.4e-14  Score=94.77  Aligned_cols=56  Identities=21%  Similarity=0.313  Sum_probs=48.5

Q ss_pred             CCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746           91 VPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus        91 gekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      |+++|.|.+|++.|.....|..|+++|++++||.|.                  .|++.| +...|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCE------------------FCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECS------------------SSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCC------------------CCcchhCCHHHHHHHHHHhcC
Confidence            468999999999999999999999999999999998                  677899 89999999999874

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.39  E-value=6.4e-14  Score=107.01  Aligned_cols=74  Identities=20%  Similarity=0.420  Sum_probs=66.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccc---cCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNA---HKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~---Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      +.++++|.|.+|++.|.....|..|++.   |.++++|.|.                  .|++.| ....|..|+++|++
T Consensus        30 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~h~~   91 (124)
T 2dlq_A           30 HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCS------------------VCQETFRRRMELRLHMVSHTG   91 (124)
T ss_dssp             HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECS------------------SSCCEESSHHHHHHHHHHHSS
T ss_pred             CCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECC------------------CCCCccCCHHHHHHHHHHcCC
Confidence            4567899999999999999999999984   6889999998                  677899 88999999999999


Q ss_pred             CCCCCCCCCCcccccccCC
Q 047746          165 VVPPQRPPDMRGGARFEQG  183 (247)
Q Consensus       165 ekPy~~~~~~~cg~~f~~~  183 (247)
                      ++||.|   ..|++.|...
T Consensus        92 ~~~~~C---~~C~~~f~~~  107 (124)
T 2dlq_A           92 EMPYKC---SSCSQQFMQK  107 (124)
T ss_dssp             SCSEEC---SSSCCEESSH
T ss_pred             CCCccC---CCccchhCCH
Confidence            999988   7899999873

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.38  E-value=7e-14  Score=93.20  Aligned_cols=55  Identities=15%  Similarity=0.210  Sum_probs=51.8

Q ss_pred             ccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      ||.|.+|++.|.....|..|+++|++++||.|.                  .|++.| +...|..|+++|+++|
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCT------------------YCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECS------------------SSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCC------------------CCCchhcCHHHHHHHHHHhcccC
Confidence            699999999999999999999999999999998                  677899 8999999999999986

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.34  E-value=2.3e-13  Score=108.45  Aligned_cols=74  Identities=24%  Similarity=0.267  Sum_probs=63.6

Q ss_pred             cccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCC
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRP  171 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~  171 (247)
                      +.|.|.+|++.|.....|..|+++|+++++|.|.  .              +.|++.| +...|..|+++|++++||.| 
T Consensus        61 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~--------------~~C~~~f~~~~~L~~H~~~h~~~~~~~C-  123 (155)
T 2rpc_A           61 YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCP--F--------------PGCGKIFARSENLKIHKRTHTGEKPFKC-  123 (155)
T ss_dssp             CBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECS--C--------------TTTCCEESCHHHHHHHHTTTCSSCSBCC-
T ss_pred             cccCCCCcccccCCHHHHHHHHHhcCCCCcccCC--c--------------CCCCCccCCHHHHHHHHHhhCCCCCccC-
Confidence            3589999999999999999999999999999998  1              1277889 78899999999999999988 


Q ss_pred             CCCcccccccCC
Q 047746          172 PDMRGGARFEQG  183 (247)
Q Consensus       172 ~~~~cg~~f~~~  183 (247)
                      +...|++.|...
T Consensus       124 ~~~~C~k~f~~~  135 (155)
T 2rpc_A          124 EFEGCDRRFANS  135 (155)
T ss_dssp             SSTTCCCCBSSH
T ss_pred             CCCCCCCccCCH
Confidence            112499999873

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.7e-13  Score=102.69  Aligned_cols=59  Identities=20%  Similarity=0.314  Sum_probs=53.3

Q ss_pred             CCCcccccCcCCccc-CCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHH-hhhcCCCC
Q 047746           90 TVPRVFSCNYCRRKF-YSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAH-AAMHQGVV  166 (247)
Q Consensus        90 tgekpf~C~~Cgk~F-~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H-~riHtgek  166 (247)
                      .++++|.|++|++.| .....|..|+++| +++||.|.                  .|||.| +...|+.| +++|+++ 
T Consensus        30 ~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~------------------~Cgk~F~~~~~L~~H~~~~H~~~-   89 (96)
T 2ctd_A           30 VDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCH------------------HCGKQLRSLAGMKYHVMANHNSL-   89 (96)
T ss_dssp             HHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCS------------------SSCCCCSSHHHHHHHHHHHTCCC-
T ss_pred             cCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECC------------------CCCCeeCCHHHHHHHhHHhcCCC-
Confidence            357899999999999 9999999999999 99999998                  677999 89999999 9999865 


Q ss_pred             CC
Q 047746          167 PP  168 (247)
Q Consensus       167 Py  168 (247)
                      ||
T Consensus        90 p~   91 (96)
T 2ctd_A           90 PS   91 (96)
T ss_dssp             SS
T ss_pred             CC
Confidence            54

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.33  E-value=3.2e-13  Score=98.99  Aligned_cols=60  Identities=18%  Similarity=0.213  Sum_probs=54.4

Q ss_pred             cccccCcCCcccCCCccccccccc-cCCCcc--------ccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhc
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNA-HKRERT--------MAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMH  162 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~-Htgekp--------~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riH  162 (247)
                      ..|.|.+|++.|.....|..|+++ |+++++        |.|.                  .|++.| +...|..|+++|
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~------------------~C~k~f~~~~~L~~H~~~H   85 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP------------------REGKSFKAKYKLVNHIRVH   85 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCS------------------STTCCCSSHHHHHHHHHHH
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCC------------------CCCcccCCHHHHHHHHHhc
Confidence            357899999999999999999998 999887        5555                  788999 899999999999


Q ss_pred             CCCCCCCC
Q 047746          163 QGVVPPQR  170 (247)
Q Consensus       163 tgekPy~~  170 (247)
                      ++++||.|
T Consensus        86 ~~~k~~~C   93 (95)
T 2ej4_A           86 TGEKSGPS   93 (95)
T ss_dssp             HTCCCCSS
T ss_pred             CCCCCCCC
Confidence            99999988

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.32  E-value=1.5e-14  Score=105.32  Aligned_cols=69  Identities=26%  Similarity=0.404  Sum_probs=60.1

Q ss_pred             CcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +++|.|.+|++.|.....|..|+++|++++||.|.                  .|++.| ....|..|+++|++ ++|.|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~h~~-~~~~c   61 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD------------------ICGRKFARSDERKRHRDIQHI-LPILE   61 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT------------------TTCCEESSHHHHHHHHHHHTH-HHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCC------------------CCCCccCCHHHHHHHHHHhCC-CcchH
Confidence            58999999999999999999999999999999998                  677899 88999999999985 66655


Q ss_pred             CCCCcccccccC
Q 047746          171 PPDMRGGARFEQ  182 (247)
Q Consensus       171 ~~~~~cg~~f~~  182 (247)
                         ..|++.|..
T Consensus        62 ---~~C~~~f~~   70 (88)
T 1llm_C           62 ---DKVEELLSK   70 (88)
T ss_dssp             ---HHHHHHHHH
T ss_pred             ---HHHHHHHHH
Confidence               667766654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=3e-13  Score=91.13  Aligned_cols=56  Identities=32%  Similarity=0.539  Sum_probs=51.1

Q ss_pred             cccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHh-hhcCCCC
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHA-AMHQGVV  166 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~-riHtgek  166 (247)
                      |+|.|.+|++.|.....|..|+++|++++||.|.                  .|++.| +...|..|+ ++|+++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCG------------------LCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECT------------------TTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCC------------------CCCCccCCHHHHHHHHHHHcCCcC
Confidence            5899999999999999999999999999999998                  677899 899999996 7898763

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=9.4e-13  Score=99.95  Aligned_cols=85  Identities=7%  Similarity=-0.086  Sum_probs=71.1

Q ss_pred             CCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhh--cCCCCCCCCCCCCcccccc--
Q 047746          106 SSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAM--HQGVVPPQRPPDMRGGARF--  180 (247)
Q Consensus       106 ~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~ri--HtgekPy~~~~~~~cg~~f--  180 (247)
                      +...|..|+++|++++||.|.                  .|++.| ....|..|+++  |.+++++.  .|..|++.|  
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~~~h~~~~~~~--~C~~C~~~f~f   62 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCK------------------DCSAAYDTLVELTVHMNETGHYRDDNHE--TDNNNPKRWSK   62 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBS------------------SSSCEESSHHHHHHHHHHTCCCBCSCCC--CCCCCCSCCSS
T ss_pred             cchhhhhheeeeCCCCCEECC------------------ccCchhcCHHHHHHHHHHhCccccCCCc--cCCCCCccccc
Confidence            456799999999999999998                  677899 88999999999  88888875  148899988  


Q ss_pred             cCC-CC---------CCCccccCCCCccccCCCceecCCC
Q 047746          181 EQG-YF---------AMPMFMEDDDIDLFWPGSFRQVSEA  210 (247)
Q Consensus       181 ~~~-~l---------~~P~~~~~c~~~f~~~~s~~~~~~~  210 (247)
                      ... .|         .+||.|+.|++.|.+...|+.|-..
T Consensus        63 ~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~  102 (115)
T 2dmi_A           63 PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIK  102 (115)
T ss_dssp             CCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred             ccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHH
Confidence            542 22         2799999999999999999988543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=2e-13  Score=93.74  Aligned_cols=58  Identities=16%  Similarity=0.292  Sum_probs=53.1

Q ss_pred             CCCCcccccCcCCcccCCCccccccccc-c-CCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNA-H-KRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~-H-tgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      ++++++|.|.+|++.|.....|..|+++ | ++++||.|.                  .|++.| +...|..|+++|++
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCP------------------FCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECT------------------TTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECC------------------CCCCccCCHHHHHHHHHHHcC
Confidence            5678999999999999999999999998 8 699999998                  677899 89999999999876

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.28  E-value=2.1e-13  Score=98.67  Aligned_cols=61  Identities=31%  Similarity=0.461  Sum_probs=53.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      +.++++|.|.+|++.|.....|..|+++|+++++|.|.                  .|++.| +...|..|+++|+++|+
T Consensus        29 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           29 HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD------------------ICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             HHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT------------------TTCCEESSHHHHHHHHGGGGC---
T ss_pred             hCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCC------------------CCCchhCCHHHHHHHHHHhcccCC
Confidence            34578999999999999999999999999999999998                  677899 89999999999999874

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.28  E-value=8.6e-13  Score=96.70  Aligned_cols=62  Identities=24%  Similarity=0.326  Sum_probs=57.3

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      +.++++|.|.+|++.|.....|..|+++|+++++|.|.                  .|++.| +...|..|+++|+++++
T Consensus        31 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           31 HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ------------------ICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECS------------------SSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             cCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCC------------------CCCCccCCHHHHHHHHHHhcCCCC
Confidence            55678999999999999999999999999999999998                  677899 88999999999999987


Q ss_pred             C
Q 047746          168 P  168 (247)
Q Consensus       168 y  168 (247)
                      .
T Consensus        93 p   93 (96)
T 2dmd_A           93 P   93 (96)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.26  E-value=4.9e-13  Score=95.41  Aligned_cols=70  Identities=19%  Similarity=0.242  Sum_probs=58.5

Q ss_pred             cccc--CcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746           94 VFSC--NYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus        94 pf~C--~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ||.|  ..|++.|.....|..|+++|++++||.|.  .              +.|++.| +...|..|+++|++   |.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~--------------~~C~~~f~~~~~l~~H~~~h~~---~~C   61 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP--H--------------EGCDKRFSLPSRLKRHEKVHAG---YPC   61 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECC--S--------------TTCCCEESSHHHHHHHHHHHHS---EEC
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCC--C--------------CCCcCccCCHHHHHHHHHHhCC---CCC
Confidence            6899  99999999999999999999999999998  1              1277899 88999999999998   776


Q ss_pred             CCCCcccccccC
Q 047746          171 PPDMRGGARFEQ  182 (247)
Q Consensus       171 ~~~~~cg~~f~~  182 (247)
                      ..+..|++.|..
T Consensus        62 ~~~~~C~~~f~~   73 (85)
T 2j7j_A           62 KKDDSCSFVGKT   73 (85)
T ss_dssp             CSCSSCCCEESS
T ss_pred             CCCCCCCCccCC
Confidence            322237777764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.26  E-value=1.4e-12  Score=98.09  Aligned_cols=60  Identities=18%  Similarity=0.298  Sum_probs=55.3

Q ss_pred             CcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhh-hcCCCCCCC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAA-MHQGVVPPQ  169 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~r-iHtgekPy~  169 (247)
                      +++|.|.+|++.|.....|..|++ |++++||.|.                  .|++.| +...|..|++ +|++++||.
T Consensus        40 ~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~------------------~C~~~f~~~~~L~~H~~~~H~~~~~~~  100 (107)
T 1wjp_A           40 RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCL------------------ECMRTFKSSFSIWRHQVEVHNQNNMAP  100 (107)
T ss_dssp             HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEG------------------GGTEECSSHHHHHHHHHHTSCCCCCCC
T ss_pred             CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCc------------------cccchhCCHHHHHHHHHHHcCCCCCCC
Confidence            368999999999999999999996 9999999998                  567889 8999999997 999999998


Q ss_pred             C
Q 047746          170 R  170 (247)
Q Consensus       170 ~  170 (247)
                      +
T Consensus       101 ~  101 (107)
T 1wjp_A          101 T  101 (107)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=1.8e-12  Score=91.88  Aligned_cols=63  Identities=14%  Similarity=0.241  Sum_probs=54.5

Q ss_pred             CCCCCcccccCcCCcccCCCcccccccc-ccCCC-ccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhc-C
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQN-AHKRE-RTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMH-Q  163 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r-~Htge-kp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riH-t  163 (247)
                      .++++++|.|.+|++.|.....|..|++ .|.++ ++|.|.                  .|++.| +...|..|+++| .
T Consensus         9 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~------------------~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            9 THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCP------------------HCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECS------------------SSSCEESSHHHHHHHHHHTSC
T ss_pred             ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCC------------------CCCCccCCHHHHHHHHHHhCC
Confidence            3788999999999999999999999997 78875 899998                  677899 899999999974 4


Q ss_pred             CCCCC
Q 047746          164 GVVPP  168 (247)
Q Consensus       164 gekPy  168 (247)
                      .++|.
T Consensus        71 ~~~p~   75 (77)
T 2ct1_A           71 YSGPS   75 (77)
T ss_dssp             CSCCC
T ss_pred             CCCCC
Confidence            55553

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=9.2e-13  Score=92.17  Aligned_cols=57  Identities=26%  Similarity=0.459  Sum_probs=52.6

Q ss_pred             CCCCcccccC--cCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcC
Q 047746           89 ATVPRVFSCN--YCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus        89 ~tgekpf~C~--~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHt  163 (247)
                      ++++++|.|.  .|++.|.....|..|+++|+++++|.|.                  .|++.| +...|..|+++|+
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCR------------------ICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECT------------------TTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECC------------------CCCchhCCHHHHHHHHHhcC
Confidence            5678999997  5999999999999999999999999998                  677899 8999999999996

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.23  E-value=2.3e-12  Score=89.99  Aligned_cols=58  Identities=22%  Similarity=0.385  Sum_probs=51.6

Q ss_pred             CCCCcccccCc--CCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhc
Q 047746           89 ATVPRVFSCNY--CRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMH  162 (247)
Q Consensus        89 ~tgekpf~C~~--Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riH  162 (247)
                      ....++|.|.+  |++.|.....|..|+++|++++||.|..                ..|++.| +...|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~----------------~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSW----------------KGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCC----------------TTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCC----------------CCCCcccCCHHHHHhHhhcC
Confidence            45689999999  9999999999999999999999999961                1377899 899999999987

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=1e-12  Score=91.23  Aligned_cols=57  Identities=12%  Similarity=0.116  Sum_probs=51.1

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      ++++++|.|.+|++.|.....|..       +++|.|.                  .|++.| +...|..|+++|++++|
T Consensus        13 h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~------------------~C~~~f~~~~~l~~H~~~H~~~~~   67 (73)
T 2ctu_A           13 HLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCE------------------KCRKDSCQEAALNKDEGNESGKKT   67 (73)
T ss_dssp             CCCCSEEECSSSCCEEECCCCCCC-------SSSCCCH------------------HHHHTCSCCCSSCCCSSCCCCCCC
T ss_pred             hCCCCCeeCCcccchhCCHHHhCc-------CCCCCCC------------------CCChhhcCHHHHHHHHHhhcCCCC
Confidence            677899999999999999999887       7899998                  556788 78899999999999999


Q ss_pred             CCC
Q 047746          168 PQR  170 (247)
Q Consensus       168 y~~  170 (247)
                      |.|
T Consensus        68 ~~C   70 (73)
T 2ctu_A           68 SGP   70 (73)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            988

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.21  E-value=4.7e-12  Score=84.04  Aligned_cols=51  Identities=8%  Similarity=0.097  Sum_probs=47.1

Q ss_pred             CcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCC
Q 047746          101 RRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQ  169 (247)
Q Consensus       101 gk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~  169 (247)
                      +|.|.....|..|+++|++++||.|.                  .||+.| +...|..|+++|+|++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCP------------------ICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECT------------------TTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCC------------------CCCcccCCHHHHHHHHHHhccCCCCC
Confidence            57899999999999999999999998                  677899 8999999999999999984

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=78.48  Aligned_cols=42  Identities=17%  Similarity=0.321  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytn_A            1 GSSGSSGTGKKPYKCN------------------ECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSCCSSCBCT------------------TTCCBCSSHHHHHHHGGGTSCCCCCSC
T ss_pred             CCCCcCCCCCcCeECC------------------CCCCeeCCHHHHHHHhhhcCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999998

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=4.9e-12  Score=87.30  Aligned_cols=60  Identities=17%  Similarity=0.231  Sum_probs=53.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      ..++++|.|.+|++.|. ...|..|+++ ++++||.|.                 ..||+.| +...|..|+++|..++|
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~-----------------~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACP-----------------NQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECT-----------------TCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCC-----------------cccCcccccHHHHHHHHHhhcccCc
Confidence            45689999999999999 9999999999 999999996                 1478999 88999999999988776

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.19  E-value=1.5e-11  Score=78.45  Aligned_cols=42  Identities=21%  Similarity=0.329  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .+|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em0_A            1 GSSGSSGMGEKTWKCR------------------ECDMCFSQASSLRLHQNVHVGEKPSGP   43 (46)
T ss_dssp             CCCCCCSCCCCCCCCS------------------SSCCCCSSHHHHHHHGGGGSSSSCSCS
T ss_pred             CCCcCccCCCcCeECC------------------CCCcccCCHHHHHHHHHHcCCCCCcCC
Confidence            3699999999999998                  677999 89999999999999999988

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.18  E-value=2.2e-12  Score=91.47  Aligned_cols=57  Identities=26%  Similarity=0.567  Sum_probs=52.2

Q ss_pred             CCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746           90 TVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus        90 tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|.                  .|++.| +...|..|+++|+|
T Consensus        25 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           25 SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ------------------VCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECT------------------TTSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCC------------------CcchhhCChHHHHHHHHhhCC
Confidence            4578999999999999999999999999999999998                  677899 89999999999986

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.6e-11  Score=78.43  Aligned_cols=42  Identities=12%  Similarity=0.187  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 g~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            1 GSSGSSGSGKKPYECK------------------ECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCCCCSCCCSCSCCCS------------------SSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCCCCcCCCCCcCCC------------------CcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4699999999999998                  677999 89999999999999999998

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.5e-11  Score=78.54  Aligned_cols=41  Identities=20%  Similarity=0.310  Sum_probs=38.3

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emf_A            2 SSGSSGTGGKHFECT------------------ECGKAFTRKSTLSMHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSSSSCCEECS------------------SSCCEESCHHHHHHHGGGTSCSSCSCC
T ss_pred             ccccccCCCCCeECC------------------CCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999998

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.17  E-value=1.4e-11  Score=78.54  Aligned_cols=42  Identities=21%  Similarity=0.370  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .+|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ema_A            1 GSSGSSGTGEKRYKCN------------------ECGKVFSRNSQLSQHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCSCSSCTTSCCEECS------------------SSCCEESSHHHHHHHHTGGGCCCCCSS
T ss_pred             CCCccCCCCCcCcCCC------------------CCcchhCCHHHHHHHHHhcCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999998

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.9e-11  Score=77.84  Aligned_cols=42  Identities=21%  Similarity=0.326  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .+|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eop_A            1 GSSGSSGTGEKPHECR------------------ECGKSFSFNSQLIVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCCSCCCCCSCBCT------------------TTCCBCSSHHHHHHHHTTTTTSCCSCC
T ss_pred             CCCccccCCCCCeeCC------------------CCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.17  E-value=2.1e-11  Score=77.87  Aligned_cols=41  Identities=20%  Similarity=0.324  Sum_probs=38.4

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emk_A            2 SSGSSGTGEKPYECK------------------ECGKAFSQTTHLIQHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSSCSCBCS------------------SSCCBCSCHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCccCCCCceECC------------------CCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.2e-11  Score=77.68  Aligned_cols=42  Identities=17%  Similarity=0.335  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoq_A            1 GSSGSSGTGEKPFKCD------------------ICGKSFCGRSRLNRHSMVHTAEKPSGP   43 (46)
T ss_dssp             CCCCCCSSSSCSCCCS------------------SSCCCCSSHHHHHHHHHHTTCCCSSSC
T ss_pred             CCCCCCCCCCCCcCCC------------------cCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.5e-11  Score=78.44  Aligned_cols=43  Identities=19%  Similarity=0.310  Sum_probs=39.1

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRP  171 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~  171 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|.
T Consensus         1 ~~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytk_A            1 GSSGSSGSGEKPYKCN------------------ECGKVFTQNSHLTNHWRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSSCSEECS------------------SSCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred             CCCcccCCCCCCEeCC------------------cCCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence            3699999999999998                  677999 899999999999999999983

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.1e-11  Score=77.66  Aligned_cols=42  Identities=21%  Similarity=0.366  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eq4_A            1 GSSGSSGTGEKLYNCK------------------ECGKSFSRAPCLLKHERLHSGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCCCCCBT------------------TTTBCCSCHHHHHHHHHHCCSSSCCCC
T ss_pred             CCCcccCCCCCCeECC------------------CCCCccCchHHHHHHHHhcCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.7e-11  Score=78.20  Aligned_cols=42  Identities=19%  Similarity=0.249  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .+|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytj_A            1 GSSGSSGTGEKPYICA------------------ECGKAFTIRSNLIKHQKIHTKQKPSGP   43 (46)
T ss_dssp             CCSSCTTSSCCSEECS------------------SSCCEESSHHHHHHHHHHTSCCCCSSC
T ss_pred             CCcccCCCCCcCeECC------------------CCChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999998

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.8e-11  Score=77.98  Aligned_cols=41  Identities=20%  Similarity=0.335  Sum_probs=38.3

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCN------------------ECGKVFTQNSHLANHQRIHTGVKPSGP   43 (46)
T ss_dssp             CCSSCCCCCCSSEET------------------TTTEECSSHHHHHHHHGGGSCCCSCSS
T ss_pred             CCCCCCCCCCCeECC------------------CcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            699999999999998                  677899 89999999999999999988

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.16  E-value=1.9e-11  Score=77.86  Aligned_cols=41  Identities=15%  Similarity=0.182  Sum_probs=38.4

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2el4_A            2 SSGSSGTGVKPYGCS------------------QCAKTFSLKSQLIVHQRSHTGVKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCSEECS------------------SSSCEESSHHHHHHHGGGSSSCCCSCC
T ss_pred             ccccCCCCCCceECC------------------CCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.16  E-value=2.5e-11  Score=77.55  Aligned_cols=42  Identities=21%  Similarity=0.380  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|+|.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ely_A            1 GSSGSSGTGEKPFKCV------------------ECGKGFSRRSALNVHHKLHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCCSBCCS------------------SSCCCBSSTTHHHHHHHHHSCCSSCSC
T ss_pred             CCCCCCCCCCCCcccC------------------ccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999998

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.2e-11  Score=77.69  Aligned_cols=42  Identities=24%  Similarity=0.426  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 g~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epz_A            1 GSSGSSGTGEKPFDCI------------------DCGKAFSDHIGLNQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCCSBCCT------------------TTCCCBSSHHHHHHHHTTTTTCCCCSS
T ss_pred             CCCCCCcCCCCCeECC------------------CCCceeCCHHHHHHHHHHhCCCCCCCC
Confidence            4699999999999998                  677999 89999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.7e-11  Score=77.38  Aligned_cols=42  Identities=19%  Similarity=0.317  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~h~~~h~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2elz_A            1 GSSGSSGSVEKPYKCE------------------DCGKGYNRRLNLDMHQRVHMGEKTSGP   43 (46)
T ss_dssp             CCCCSCCCCCSSCBCS------------------SSCCBCSSHHHHHHHGGGGGSCCCCCS
T ss_pred             CCCCCCCCCCCCeeCc------------------ccCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            3689999999999998                  677999 89999999999999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.8e-11  Score=78.09  Aligned_cols=42  Identities=24%  Similarity=0.387  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytd_A            1 GSSGSSGSGEKPYKCS------------------ECGKAFHRHTHLNEHRRIHTGYRPSGP   43 (46)
T ss_dssp             CCCCCCSCCCCSEECS------------------SSCCEESSHHHHHHHHHHHTCCCSSCS
T ss_pred             CCCccccCCCcCeECC------------------CCCCeeCChHHHHHHHHHcCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999998

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.9e-11  Score=77.19  Aligned_cols=42  Identities=14%  Similarity=0.152  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ++|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 g~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            1 GSSGSSGAGENPFKCS------------------KCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCCSCCCSCCCSEECS------------------SSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCCccccCCCCCeECC------------------CCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            4799999999999998                  677899 89999999999999999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.9e-11  Score=76.23  Aligned_cols=41  Identities=22%  Similarity=0.340  Sum_probs=37.8

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCD------------------QCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCT------------------TTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCC------------------CccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            589999999999998                  677999 89999999999999999976

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2e-11  Score=77.83  Aligned_cols=42  Identities=21%  Similarity=0.324  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .+|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ep3_A            1 GSSGSSGTGEKPYRCA------------------ECGKAFTDRSNLFTHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSSCCCSEECS------------------SSCCEESSHHHHHHHHTTTTTSCCCCT
T ss_pred             CCCCCCCCCCCCeECC------------------CCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999998

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.1e-11  Score=77.68  Aligned_cols=42  Identities=24%  Similarity=0.357  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emm_A            1 GSSGSSGTGERPHKCN------------------ECGKSFIQSAHLIQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCSSCCCSEECS------------------SSCCEESSHHHHHHHHHHHSCCCTTSS
T ss_pred             CCCcCCcCCCCCeeCC------------------CCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999988

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.9e-11  Score=77.07  Aligned_cols=41  Identities=17%  Similarity=0.274  Sum_probs=38.5

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCN------------------ECGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSSSCSSSCC------------------SSCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             CcccccCCCCCeECC------------------CCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999998

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.15  E-value=2.1e-11  Score=76.17  Aligned_cols=40  Identities=23%  Similarity=0.282  Sum_probs=37.3

Q ss_pred             cccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          113 HQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       113 H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      |+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECS------------------ECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECS------------------SSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCC------------------CcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            78999999999998                  677899 89999999999999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.2e-11  Score=77.63  Aligned_cols=42  Identities=19%  Similarity=0.409  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep2_A            1 GSSGSSGTGEKPYECS------------------ICGKSFTKKSQLHVHQQIHTGEKPSGP   43 (46)
T ss_dssp             CCSSSCSSCCCSEECS------------------SSCCEESSHHHHHHHHHTTSSCCSCCS
T ss_pred             CCCCCCCCCCcCcCCC------------------CCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999998

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.7e-11  Score=77.12  Aligned_cols=42  Identities=21%  Similarity=0.360  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytr_A            1 GSSGSSGTGEKPYKCN------------------ECGKAFSQTSKLARHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCCSSCCTTCCT------------------TTCCCCSSHHHHHHHHTTTTTCSCCCS
T ss_pred             CCCCcCCCCCcCcCCC------------------CCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999988

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.5e-11  Score=77.42  Aligned_cols=42  Identities=19%  Similarity=0.330  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            1 GSSGSSGTGEKPYKCN------------------ECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCCSCBCS------------------SSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CCCCcCCCCCcCeECC------------------CCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.9e-11  Score=77.99  Aligned_cols=42  Identities=19%  Similarity=0.313  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2yu8_A            1 GSSGSSGTGEKPYKCN------------------ECGKVFTQNSHLARHRRVHTGGKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSSEECS------------------SSCCEESSSHHHHHHTHHHHSCCCSCS
T ss_pred             CCcCcCCCCCCCeECC------------------cCCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.5e-11  Score=77.41  Aligned_cols=42  Identities=19%  Similarity=0.295  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|+|.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em7_A            1 GSSGSSGTGEKPYKCE------------------ECGKGFICRRDLYTHHMVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSSCCCSEECS------------------SSCCEESCHHHHHHHGGGGTTCCCSST
T ss_pred             CCCCCCCCCCcCccCC------------------CccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.2e-11  Score=77.70  Aligned_cols=41  Identities=22%  Similarity=0.307  Sum_probs=38.4

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emy_A            2 SSGSSGTGENPYECH------------------ECGKAFSRKYQLISHQRTHAGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSCCEECS------------------SSCCEESSHHHHHHHHHHHTTSCCSCS
T ss_pred             CCCCCCCCCcCcCCC------------------CCCcccCcHHHHHHHHHHcCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.3e-11  Score=77.62  Aligned_cols=42  Identities=19%  Similarity=0.311  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ene_A            1 GSSGSSGTGEKPYKCN------------------ECGKVFRHNSYLSRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCSSSEECS------------------SSCCEESSHHHHHHHHTTTCCCCCCSC
T ss_pred             CCcccCCCCCCCeECC------------------CCCchhCChHHHHHHHhhcCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.7e-11  Score=78.19  Aligned_cols=42  Identities=24%  Similarity=0.379  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .+|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emh_A            1 GSSGSSGTGERPYICT------------------VCGKAFTDRSNLIKHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSCSCCCSEECT------------------TTCCEESSHHHHHHHHHHHHCSSCSSS
T ss_pred             CCCCCCCCCCCCcCCC------------------CCCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999998

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3e-11  Score=77.17  Aligned_cols=42  Identities=21%  Similarity=0.270  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytq_A            1 GSSGSSGAGEKPYGCS------------------ECGKAFSSKSYLIIHMRTHSGEKPSGP   43 (46)
T ss_dssp             CCCSSCSSCCCSCBCS------------------SSCCBCSCHHHHHHHHTTTCCSCSSCC
T ss_pred             CCCCcCcCCCCCcCCC------------------ccChhhCChHHHHHHHHHhCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999998

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.4e-11  Score=75.96  Aligned_cols=41  Identities=22%  Similarity=0.416  Sum_probs=37.8

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            1 GSSGSSGGEKPYPCE------------------ICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSSSCCBCCS------------------SSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCcccCCCCCEECC------------------CCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            589999999999998                  677999 89999999999999999976

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.5e-11  Score=77.37  Aligned_cols=41  Identities=20%  Similarity=0.360  Sum_probs=38.3

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eml_A            2 SSGSSGTGEKPYECS------------------VCGKAFSHRQSLSVHQRIHSGKKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECS------------------SSCCEESSHHHHHHHHGGGSSCCCSCS
T ss_pred             CccCCcCCCCCeeCC------------------CcCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            699999999999998                  677899 89999999999999999988

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.1e-11  Score=77.08  Aligned_cols=42  Identities=19%  Similarity=0.360  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .+|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            1 GSSGSSGSGEKPFQCE------------------ECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCCCCSSSBCCS------------------SSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             CCcccCCCCCcCCCCC------------------CCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.14  E-value=2.7e-11  Score=77.13  Aligned_cols=42  Identities=19%  Similarity=0.317  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em9_A            1 GSSGSSGTGEKPYNCK------------------ECGKSFRWASCLLKHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCSCCSCCCCCSEECS------------------SSCCEESSHHHHHHHGGGGTSCCCCST
T ss_pred             CCCCCCCCCCcCeECC------------------ccccccCChHHHHHHHHHhCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.3e-11  Score=77.56  Aligned_cols=42  Identities=21%  Similarity=0.358  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq0_A            1 GSSGSSGTGEKPYKCH------------------ECGKVFRRNSHLARHQLIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCTTCCCCEECT------------------TTCCEESSHHHHHHHHTTTCCCCCSCC
T ss_pred             CCCCcCCCCCCCeECC------------------CCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999988

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.9e-11  Score=77.01  Aligned_cols=41  Identities=15%  Similarity=0.087  Sum_probs=38.3

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .||+.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epw_A            2 SSGSSGTGEKPCKCT------------------ECGKAFCWKSQLIMHQRTHVDDKHSGP   43 (46)
T ss_dssp             CCCCCCCCCCSEECS------------------SSCCEESSSHHHHHHHHHCCSCCCSCC
T ss_pred             cCcccCCCCCCeeCC------------------CCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.8e-11  Score=77.40  Aligned_cols=42  Identities=21%  Similarity=0.317  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 g~h~~~h~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytm_A            1 GSSGSSGTGEKPYKCM------------------ECGKAFGDNSSCTQHQRLHTGQRPSGP   43 (46)
T ss_dssp             CCSCCCCSSCCSSSBT------------------TTTBCCSSHHHHHHHHHHHHSCCCCCC
T ss_pred             CCCCcCCCCCCCcCCC------------------CCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            3689999999999998                  677999 89999999999999999988

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.14  E-value=9.4e-12  Score=85.72  Aligned_cols=42  Identities=24%  Similarity=0.405  Sum_probs=37.0

Q ss_pred             CccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccC
Q 047746          120 ERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       120 ekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~  182 (247)
                      ||||.|.                  .|||.| +...|..|+++|+|+|||.|   ..||+.|.+
T Consensus         2 EKpy~C~------------------~C~k~F~~~~~L~~H~~~Ht~ekp~~C---~~C~k~F~~   44 (60)
T 4gzn_C            2 ERPFFCN------------------FCGKTYRDASGLSRHRRAHLGYRPRSC---PECGKCFRD   44 (60)
T ss_dssp             CCCEECT------------------TTCCEESSHHHHHHHHHHHHTCCCEEC---TTTCCEESS
T ss_pred             CCCccCC------------------CCCCEeCCHHHHHHHHHHhCCCcCeEC---CCCCCCcCC
Confidence            8999998                  677999 89999999999999999987   677777765

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.7e-11  Score=76.30  Aligned_cols=41  Identities=17%  Similarity=0.196  Sum_probs=38.3

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCN------------------ECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCT------------------TTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECC------------------CCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999988

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.9e-11  Score=77.13  Aligned_cols=42  Identities=19%  Similarity=0.340  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            1 GSSGSSGTGEKPYKCN------------------ECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSCCCTTCCS------------------SSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CCCCcCCCCCcCeECC------------------CCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999998

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.2e-11  Score=76.75  Aligned_cols=41  Identities=17%  Similarity=0.303  Sum_probs=38.5

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            2 SSGSSGTGEKPYECS------------------DCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSSCCS------------------SSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             ccccCCCCCCCcCCC------------------CCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999998

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.9e-11  Score=75.39  Aligned_cols=40  Identities=15%  Similarity=0.159  Sum_probs=37.2

Q ss_pred             cccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          113 HQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       113 H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      |+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCA------------------ECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCT------------------TTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECC------------------CCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            78999999999998                  677899 89999999999999999987

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.13  E-value=3.3e-12  Score=98.94  Aligned_cols=57  Identities=21%  Similarity=0.275  Sum_probs=52.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      ++++++|.|.+|++.|.....|..|+++|  ++||.|.                  .|++.| +...|..|+++|+|.
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~------------------~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCP------------------VCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCT------------------TTCCBCSSHHHHHHHHHHTTCC
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCC------------------CCCcccCCHHHHHHHHHHHCCc
Confidence            55689999999999999999999999999  8999998                  677999 899999999999985

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.2e-11  Score=77.64  Aligned_cols=41  Identities=17%  Similarity=0.244  Sum_probs=38.3

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emp_A            2 SSGSSGTGVKPYMCN------------------ECGKAFSVYSSLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSSCCCSEECS------------------SSCCEESCHHHHHHHHHHHHCCSCCSC
T ss_pred             CcccccCCCcCeECC------------------CCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999998

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.6e-11  Score=77.46  Aligned_cols=42  Identities=17%  Similarity=0.296  Sum_probs=38.9

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ++|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em5_A            1 GSSGSSGSSTKSHQCH------------------ECGRGFTLKSHLNQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSCSEECS------------------SSCCEESSHHHHHHHHTTTSCSCCSSC
T ss_pred             CCCcCCCCCCCCeECC------------------cCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4799999999999998                  677999 89999999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.5e-11  Score=77.31  Aligned_cols=42  Identities=17%  Similarity=0.228  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .+|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en8_A            1 GSSGSSGSGEKSHTCD------------------ECGKNFCYISALRIHQRVHMGEKCSGP   43 (46)
T ss_dssp             CCCCCCCCCCSSEECT------------------TTCCEESSHHHHHHHHTTTCCSCSSCC
T ss_pred             CCccccCCCCCCeECC------------------CcCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999988

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.13  E-value=3e-11  Score=77.14  Aligned_cols=42  Identities=17%  Similarity=0.195  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 g~h~~~h~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2el6_A            1 GSSGSSGAGVNPYKCS------------------QCEKSFSGKLRLLVHQRMHTREKPSGP   43 (46)
T ss_dssp             CCSCCSSCCCCSEECS------------------SSSCEESSHHHHHHHHGGGCCSSCCSC
T ss_pred             CCCCCCCCCCCCeECC------------------CCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            4689999999999998                  677899 89999999999999999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.1e-11  Score=77.90  Aligned_cols=42  Identities=19%  Similarity=0.185  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .||+.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoo_A            1 GSSGSSGSGERPYGCN------------------ECGKNFGRHSHLIEHLKRHFREKSSGP   43 (46)
T ss_dssp             CCCCCCCSCCCCEECS------------------SSCCEESSHHHHHHHHHHHHSTTSSCC
T ss_pred             CCCCCCCCCCCCEEcc------------------ccCcccCCHHHHHHHHHHHcCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999988

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.3e-11  Score=77.57  Aligned_cols=42  Identities=19%  Similarity=0.343  Sum_probs=38.9

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~~~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            1 GSSGSSGTGEKPYECK------------------VCSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSCCSEECS------------------SSCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCCCCCCCCCcCeECC------------------CCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4699999999999998                  677999 89999999999999999998

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.6e-11  Score=76.54  Aligned_cols=41  Identities=15%  Similarity=0.180  Sum_probs=38.4

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eov_A            2 SSGSSGTGEKPYKCS------------------DCGKSFTWKSRLRIHQKCHTGERHSGP   43 (46)
T ss_dssp             CCCCCCSSCCSCBCS------------------SSCCBCSSHHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCCCCCccCC------------------ccChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999988

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.3e-11  Score=77.68  Aligned_cols=42  Identities=26%  Similarity=0.372  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A            1 GSSGSSGTGERHYECS------------------ECGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSCCCCCEECS------------------SSCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             CCcccCcCCCCCeECC------------------cCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999998

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3e-11  Score=76.88  Aligned_cols=42  Identities=24%  Similarity=0.357  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eme_A            1 GSSGSSGSGEKPYVCD------------------YCGKAFGLSAELVRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCTTCCCCSEECS------------------SSCCEESSHHHHHHHHGGGCCCSCCSS
T ss_pred             CCCCCCCCCCCCeECC------------------CCChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            4799999999999998                  677899 89999999999999999988

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.4e-11  Score=77.56  Aligned_cols=41  Identities=20%  Similarity=0.245  Sum_probs=38.3

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            2 SSGSSGTGQRPYECI------------------ECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCCCSSSEECS------------------SSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             CCccccCCCcCcCCC------------------CCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999998

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.4e-11  Score=76.91  Aligned_cols=42  Identities=21%  Similarity=0.377  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            1 GSSGSSGMGEKCYKCD------------------VCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCCCCCCCCBCS------------------SSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CCCccccCCCCCeECC------------------CCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999998

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.3e-11  Score=77.56  Aligned_cols=42  Identities=21%  Similarity=0.318  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ++|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~h~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en6_A            1 GSSGSSGSGEKPYGCN------------------ECGKTFSQKSILSAHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCSSCCEEET------------------TTTEEESSHHHHHHHHHHHSSCCCSSS
T ss_pred             CCCCCccCCCcCeECC------------------CCCcccCchHHHHHHHHHcCCCCCCCC
Confidence            4699999999999998                  677899 89999999999999999988

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.12  E-value=2.4e-11  Score=77.58  Aligned_cols=42  Identities=21%  Similarity=0.345  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            1 GSSGSSGTGEKPFECA------------------ECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCCSEECS------------------SSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCCCCCCCEECC------------------CCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999998

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.5e-11  Score=76.73  Aligned_cols=41  Identities=17%  Similarity=0.268  Sum_probs=38.4

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            2 SSGSSGTGENPFICS------------------ECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCCCCCCSCCSCBCT------------------TTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCCCCCCCEECC------------------ccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999998

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.5e-11  Score=76.69  Aligned_cols=41  Identities=20%  Similarity=0.316  Sum_probs=38.4

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCN------------------ECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSCCCCCT------------------TTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             CcccccCCCCCeECC------------------cCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999998

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.7e-11  Score=77.13  Aligned_cols=41  Identities=22%  Similarity=0.296  Sum_probs=38.4

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            2 SSGSSGTGEKPYKCN------------------ECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCCEECT------------------TSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             CccCCCCCCCCeecc------------------ccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            699999999999998                  677899 89999999999999999998

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.1e-11  Score=76.94  Aligned_cols=41  Identities=22%  Similarity=0.332  Sum_probs=38.4

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|+++++|.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A            2 SSGSSGTGERHYECS------------------ECGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             CCCCSCSSCCCEECS------------------SSCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             CCCcccCCCCCCCCC------------------CCCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999998

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.9e-11  Score=77.10  Aligned_cols=42  Identities=17%  Similarity=0.354  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytg_A            1 GSSGSSGTGEKPFKCG------------------ECGKSYNQRVHLTQHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSCCSEECT------------------TTCCEESSSHHHHTTGGGGSSCCSSCS
T ss_pred             CCCCCCCCCCCCeECC------------------CCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999988

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.5e-11  Score=76.92  Aligned_cols=41  Identities=22%  Similarity=0.331  Sum_probs=38.3

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~h~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQ------------------VCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             CCSSSCSSCCSCBCS------------------SSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCCCCCCCcccCCC------------------CCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            589999999999998                  677999 89999999999999999998

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.7e-11  Score=76.72  Aligned_cols=42  Identities=17%  Similarity=0.292  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~h~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            1 GSSGSSGAGKKLFKCN------------------ECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCSSCCCBCT------------------TTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCCCCCCCCCEECC------------------ccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            3689999999999998                  677999 89999999999999999998

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=4e-11  Score=75.83  Aligned_cols=42  Identities=24%  Similarity=0.307  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ++|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 g~h~~~h~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            1 GSSGSSGAAKTTSECQ------------------ECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CCCSCSCSSSCCCCCT------------------TTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCCCcCeECC------------------CCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            4699999999999998                  677999 88999999999999999988

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.9e-11  Score=76.12  Aligned_cols=41  Identities=17%  Similarity=0.289  Sum_probs=38.2

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~h~~~h~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            2 SSGSSGTGEKPYECD------------------VCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSSSCBCT------------------TTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CCCCCcCCCCCcCCC------------------CcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            589999999999998                  677999 89999999999999999998

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.3e-11  Score=76.72  Aligned_cols=41  Identities=17%  Similarity=0.294  Sum_probs=38.4

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            2 SSGSSGTGEKPYICN------------------ECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSCCSEECS------------------SSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCCCCCCCcCEECC------------------CCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            699999999999998                  677999 89999999999999999998

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.5e-11  Score=76.69  Aligned_cols=42  Identities=19%  Similarity=0.362  Sum_probs=38.6

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en1_A            1 GSSGSSGSGEKPFKCE------------------ECGKRFTQNSQLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCSTTCCCCCCSEEET------------------TTTEEESSHHHHHHHGGGGSCCCCSCC
T ss_pred             CCcccCCCCCCCeeCC------------------CCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999988

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.2e-11  Score=76.04  Aligned_cols=41  Identities=22%  Similarity=0.403  Sum_probs=37.6

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            1 GSSGSSGGEKPYKCE------------------TCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSSCSEECT------------------TTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCcccCCCCCEeCC------------------CcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            489999999999998                  677899 89999999999999999976

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=3.7e-11  Score=75.86  Aligned_cols=42  Identities=12%  Similarity=0.159  Sum_probs=38.6

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            1 GSSGSSGHTRKRYECS------------------KCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCCSCCCCCSSEECT------------------TTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CCcccccCCCCCeECC------------------CCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            4699999999999998                  677899 89999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=3.8e-11  Score=76.56  Aligned_cols=42  Identities=19%  Similarity=0.283  Sum_probs=38.6

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~h~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2enc_A            1 GSSGSSGSGEKPFKCE------------------ECGKGFYTNSQCYSHQRSHSGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCCCCSEECS------------------SSCCEESSHHHHHHHHHHSCCSSCCSS
T ss_pred             CCCCCCCCCCCCcCCC------------------CCCCcCCChHHHHHHHHHhCCCCCCCC
Confidence            3689999999999998                  677899 89999999999999999988

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.1e-11  Score=76.84  Aligned_cols=42  Identities=19%  Similarity=0.268  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A            1 GSSGSSGTGEKPFECS------------------ECQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSCCCCSEECS------------------SSCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCCCCCCCCCCCcCCC------------------CCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999998

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.5e-11  Score=77.51  Aligned_cols=42  Identities=19%  Similarity=0.262  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .+|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            1 GSSGSSGTGEKPYSCN------------------VCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CCSCCCCSSCCSEEET------------------TTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CCccccCCCCCCeECc------------------ccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999998

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.9e-11  Score=76.58  Aligned_cols=42  Identities=21%  Similarity=0.430  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em2_A            1 GSSGSSGSGEKPFKCK------------------ECGKAFRQNIHLASHLRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCCSEECS------------------SSCCEESSHHHHHHHHHHHCCCCSSCS
T ss_pred             CCCCCCCCCCCCEECC------------------cCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999998

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.11  E-value=3.7e-11  Score=74.92  Aligned_cols=41  Identities=15%  Similarity=0.168  Sum_probs=37.6

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~H~~~H~~~~~~~C~------------------~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            1 GSSGSSGGETPYLCG------------------QCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCCSCCCSSCCEECS------------------SSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCccCCCCCCeECC------------------CCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            488999999999998                  677899 89999999999999999986

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.1e-11  Score=76.93  Aligned_cols=42  Identities=17%  Similarity=0.355  Sum_probs=38.6

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~h~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ysp_A            1 GSSGSSGTGEKPYKCE------------------KCGKGYNSKFNLDMHQKVHTGERPSGP   43 (46)
T ss_dssp             CCCCCCCSSCCSEEET------------------TTTEEESCHHHHHHHHTTSCSCCSSCC
T ss_pred             CCCCcCCCCCCCeECC------------------CCCCccCCHHHHHHHHHhhCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=4.3e-11  Score=76.27  Aligned_cols=41  Identities=20%  Similarity=0.318  Sum_probs=38.2

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yso_A            2 SSGSSGSREKSHQCR------------------ECGEIFFQYVSLIEHQVLHMGQKNSGP   43 (46)
T ss_dssp             CCSCCSSCCCCEECT------------------TTCCEESSHHHHHHHHHHHSCCSCCCT
T ss_pred             CcccccCCCCCEEcc------------------ccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            689999999999998                  677899 89999999999999999998

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.6e-11  Score=75.68  Aligned_cols=41  Identities=17%  Similarity=0.221  Sum_probs=38.2

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECN------------------ECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECT------------------TTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECC------------------CCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999987

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.2e-11  Score=76.98  Aligned_cols=41  Identities=22%  Similarity=0.284  Sum_probs=38.4

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            2 SSGSSGTGEKPYKCS------------------DCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCCSCCCEECS------------------SSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             CcccccCCCCCEECc------------------ccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999998

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.4e-11  Score=75.95  Aligned_cols=41  Identities=20%  Similarity=0.250  Sum_probs=38.2

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECC------------------ECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEET------------------TTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCC------------------CCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            699999999999998                  677899 89999999999999999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=3.8e-11  Score=75.79  Aligned_cols=40  Identities=15%  Similarity=0.149  Sum_probs=37.4

Q ss_pred             cccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          113 HQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       113 H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      |+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (44)
T 2emx_A            1 GSSGSSGEKPFGCS------------------CCEKAFSSKSYLLVHQQTHAEEKPSGP   41 (44)
T ss_dssp             CCCCCSSCCCEECS------------------SSSCEESSHHHHHHHHHHHTSSCSCSC
T ss_pred             CCCCcCCCcCccCC------------------CCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            78999999999998                  677999 89999999999999999988

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.9e-11  Score=75.75  Aligned_cols=42  Identities=19%  Similarity=0.275  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhh-hcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAA-MHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~r-iHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|++ +|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~~H~~~k~~~C   44 (47)
T 2epx_A            1 GSSGSSGTGKKPYECI------------------ECGKAFIQNTSLIRHWRYYHTGEKPSGP   44 (47)
T ss_dssp             CCCCCCCCCCCSBCCS------------------SSCCCBSSHHHHHHHHTTTTTTSCSSSC
T ss_pred             CccccccCCCCCEECC------------------ccCchhCChHHHHHHhHhhcCCCCCCCC
Confidence            3699999999999998                  677999 8999999999 9999999988

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.2e-11  Score=76.79  Aligned_cols=42  Identities=21%  Similarity=0.367  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            1 GSSGSSGTGEKPYNCE------------------ECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSSSSSCCCSEECT------------------TTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CCCCcCcCCCcCccCC------------------CCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999998

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.1e-11  Score=76.51  Aligned_cols=42  Identities=19%  Similarity=0.290  Sum_probs=38.6

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~h~~~h~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em8_A            1 GSSGSSGSGEKPYKCV------------------ECGKGYKRRLDLDFHQRVHTGEKLSGP   43 (46)
T ss_dssp             CCCCCCCCSCCSEECS------------------SSCCEESSHHHHHHHHHHHHCCCCCCS
T ss_pred             CCCCCCCCCCCCeECc------------------ccCchhCCHHHHHHHHHHHcCCCCCCC
Confidence            3689999999999998                  677899 88999999999999999988

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.1e-11  Score=76.25  Aligned_cols=41  Identities=20%  Similarity=0.319  Sum_probs=38.4

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCG------------------ECGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCCEECS------------------SSCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CCccCCCCCCCeECC------------------CCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            699999999999998                  677999 89999999999999999998

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.09  E-value=1.4e-11  Score=90.64  Aligned_cols=58  Identities=24%  Similarity=0.389  Sum_probs=52.8

Q ss_pred             CCCCcccccC--cCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746           89 ATVPRVFSCN--YCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus        89 ~tgekpf~C~--~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      +.++++|.|.  .|++.|.....|..|+++|+++++|.|.                  .|++.| +...|..|+++|++
T Consensus        40 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           40 HTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCG------------------VCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCS------------------SSCCBCSSHHHHHHHHHHHCC
T ss_pred             hCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECC------------------CCcCccCCHHHHHHHHHHhCC
Confidence            4567899996  6999999999999999999999999998                  677899 89999999999975

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.4e-11  Score=76.85  Aligned_cols=42  Identities=19%  Similarity=0.272  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~h~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A            1 GSSGSSGSGERPFKCN------------------ECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCCCSCSSCCCSCCCS------------------SSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCCcCCCCCCCeECC------------------CCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3699999999999998                  677999 89999999999999999998

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.09  E-value=2.2e-11  Score=88.89  Aligned_cols=60  Identities=20%  Similarity=0.407  Sum_probs=53.9

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCC--ccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhh-hcCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRE--RTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAA-MHQG  164 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htge--kp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~r-iHtg  164 (247)
                      ++++++|.|.+|++.|.....|..|+++|+++  ++|.|.                  .|++.| +...|..|++ +|++
T Consensus        30 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~------------------~C~~~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           30 HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ------------------SCGKGFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             SCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCS------------------SSCCCBSSHHHHHHHHHHTSCC
T ss_pred             cCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECC------------------CccchhCCHHHHHHHHHHhcCC
Confidence            45688999999999999999999999999997  999998                  677899 8999999986 8987


Q ss_pred             CC
Q 047746          165 VV  166 (247)
Q Consensus       165 ek  166 (247)
                      +.
T Consensus        92 ~~   93 (95)
T 2yt9_A           92 PS   93 (95)
T ss_dssp             CS
T ss_pred             CC
Confidence            63

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.2e-11  Score=76.15  Aligned_cols=42  Identities=19%  Similarity=0.332  Sum_probs=38.5

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~~~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            1 GSSGSSGTDSKSYNCN------------------ECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCCEEET------------------TTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCCcCCCCCCCeECc------------------ccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.8e-11  Score=77.20  Aligned_cols=42  Identities=19%  Similarity=0.258  Sum_probs=38.8

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            1 GSSGSSGTGEKPFQCK------------------ECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCCCSCCCCSEECS------------------SSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             CccccccCCCCCeeCc------------------ccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4699999999999998                  677899 89999999999999999998

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.8e-11  Score=75.92  Aligned_cols=41  Identities=22%  Similarity=0.338  Sum_probs=38.3

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            2 SSGSSGTGEKPYECN------------------QCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCSSEET------------------TTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             CcccCCCCCCCeECC------------------CCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            699999999999998                  677899 89999999999999999998

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.2e-11  Score=75.04  Aligned_cols=42  Identities=24%  Similarity=0.316  Sum_probs=38.2

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         1 ~~H~~~H~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            1 GSSGSSGSGEKPYECN------------------ECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCSEECS------------------SSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCCcccCCCcCeECC------------------CCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            3699999999999998                  677899 89999999999999999975

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=5.9e-11  Score=75.74  Aligned_cols=42  Identities=17%  Similarity=0.226  Sum_probs=38.7

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC-CCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG-VVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg-ekPy~~  170 (247)
                      +.|+++|++++||.|.                  .|++.| +...|..|+++|++ ++||.|
T Consensus         1 g~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            1 GSSGSSGQKEKCFKCN------------------KCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCCEECS------------------SSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CCCccccCCCCCEECc------------------CCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            4699999999999998                  677899 89999999999999 999988

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.05  E-value=6.8e-11  Score=84.54  Aligned_cols=69  Identities=13%  Similarity=0.077  Sum_probs=56.7

Q ss_pred             cccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC----CCCCCCCCCcccccccCC
Q 047746          109 ALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV----VPPQRPPDMRGGARFEQG  183 (247)
Q Consensus       109 ~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge----kPy~~~~~~~cg~~f~~~  183 (247)
                      .|..|+++|++++||.|.                  .|++.| +...|..|+++|.++    +||.|   ..|++.|...
T Consensus         2 s~~~H~~~H~~~k~~~C~------------------~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C---~~C~~~f~~~   60 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACS------------------HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVC---SKCGKTFTRR   60 (86)
T ss_dssp             TTTCCSTTCCCCCCEECS------------------SSSCEESSHHHHHHHHHHTTCSSCCCCCEEC---SSSCCEESCH
T ss_pred             CcccccceecCCCCCcCC------------------CCCCccCCHHHHHHHHHHhcCCcCCCcceEC---CCCCChhCCH
Confidence            578999999999999998                  677899 889999999987765    78887   7899999873


Q ss_pred             -CC---------CCCccccCCCCcc
Q 047746          184 -YF---------AMPMFMEDDDIDL  198 (247)
Q Consensus       184 -~l---------~~P~~~~~c~~~f  198 (247)
                       .|         ..|+.|..|+.+|
T Consensus        61 ~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           61 NTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             HHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             HHHHHHHHHccCCCCcccCCCCCCC
Confidence             22         2688888887764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.03  E-value=3.3e-11  Score=86.74  Aligned_cols=57  Identities=28%  Similarity=0.381  Sum_probs=52.1

Q ss_pred             CCCCcccccC--cCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcC
Q 047746           89 ATVPRVFSCN--YCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus        89 ~tgekpf~C~--~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHt  163 (247)
                      +.++++|.|.  .|++.|.....|..|+++|+++++|.|.                  .|++.| ....|..|+++|+
T Consensus        30 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           30 HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ------------------KCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECS------------------SSSCEESSHHHHHHHGGGGC
T ss_pred             cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCC------------------CCCcccCCHHHHHHHHHhhC
Confidence            5668899997  5999999999999999999999999998                  677899 8899999999995

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.02  E-value=4.6e-11  Score=89.76  Aligned_cols=58  Identities=19%  Similarity=0.310  Sum_probs=53.1

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      +.++++|.|.+|++.|.....|..|+++|+++++|.|.                  .|++.| +...|..|+++|..
T Consensus        32 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           32 HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN------------------ICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             HSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECS------------------SSCCEESCHHHHHHHHHHHHH
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCC------------------CCcchhcCHHHHHHHHHHccc
Confidence            45578999999999999999999999999999999998                  677899 88999999999875

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=7.3e-11  Score=78.27  Aligned_cols=41  Identities=24%  Similarity=0.463  Sum_probs=38.3

Q ss_pred             CCCCcccccCcCCcccCCCcccccccc-ccCCCccccccccccC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQN-AHKRERTMAKRAMRMG  131 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r-~Htgekp~~C~~~~Cg  131 (247)
                      ++++++|.|.+|++.|.....|..|++ +|++++||.|.  .|+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~--~C~   48 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ--VWV   48 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS--SSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCC--CCC
Confidence            678999999999999999999999997 99999999999  666

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.9e-10  Score=73.37  Aligned_cols=41  Identities=20%  Similarity=0.244  Sum_probs=37.5

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .++++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~~~~~h~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A            2 SSGSSGHGERGHRCS------------------DCGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSSCCCS------------------SSCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCCCCCCCCcCCC------------------CCCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            467899999999998                  677999 89999999999999999998

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.7e-10  Score=73.44  Aligned_cols=41  Identities=15%  Similarity=0.259  Sum_probs=37.7

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .++++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 s~~~~h~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep0_A            2 SSGSSGTGEKPYKCD------------------VCHKSFRYGSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSTTCCSEECS------------------SSCCEESSHHHHHHHHTTTSSSCCCSC
T ss_pred             CCCCCCCCCCCeeCc------------------ccCcccCChHHHHHHHHHhCCCCCCCC
Confidence            468899999999998                  677899 89999999999999999988

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=6.9e-11  Score=76.30  Aligned_cols=42  Identities=17%  Similarity=0.370  Sum_probs=39.0

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCCCccccccccccC
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMG  131 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg  131 (247)
                      .++++++|.|.+|++.|.....|..|+++|++++||.|.  .|+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C~   47 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSG--PSS   47 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSC--CCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCC--CCC
Confidence            367799999999999999999999999999999999999  665

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.3e-10  Score=73.72  Aligned_cols=41  Identities=12%  Similarity=0.212  Sum_probs=37.6

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|.++|++++||.|.                  .|+|.| +...|..|+++|++++||.|
T Consensus         2 s~~~~h~~~k~~~C~------------------~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            2 SSGSSGTGQKPFECT------------------HCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCCCCSCCSEEET------------------TTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCCCCcCccCC------------------CCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            578899999999998                  677899 88999999999999999988

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=2.9e-10  Score=75.28  Aligned_cols=48  Identities=13%  Similarity=0.093  Sum_probs=42.3

Q ss_pred             ccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhh-hcCCCCCCCCCCCCcccccccC
Q 047746          114 QNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAA-MHQGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       114 ~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~r-iHtgekPy~~~~~~~cg~~f~~  182 (247)
                      ...|++++||.|.                  .|++.| +...|..|++ +|++++||.|   ..|++.|.+
T Consensus         4 ~~~~~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~~H~~~k~~~C---~~C~k~F~~   53 (54)
T 2eps_A            4 GSSGSVGKPYICQ------------------SCGKGFSRPDHLNGHIKQVHTSERPHKC---QVWVSGPSS   53 (54)
T ss_dssp             CCCCCSSCCEECS------------------SSCCEESSHHHHHHHHHHTSCCCCCCCS---SSSCCSSCC
T ss_pred             CCCCCCCCCeECC------------------CCCcccCCHHHHHHHHHHhcCCCCCccC---CCCCCCCCC
Confidence            4568999999998                  677899 8999999997 9999999988   789999975

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2e-10  Score=73.16  Aligned_cols=41  Identities=17%  Similarity=0.206  Sum_probs=37.4

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..+++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         2 ~~~~~h~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytt_A            2 SSGSSGEGEKPYQCS------------------ECGKSFSGSYRLTQHWITHTREKPSGP   43 (46)
T ss_dssp             CCSSSCSCCCTTCCS------------------SSCCCCSSHHHHHHHHTHHHHCCCCSC
T ss_pred             CCCCCCCCCCCeeCC------------------CCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            457899999999998                  677999 89999999999999999998

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.98  E-value=1.8e-10  Score=81.33  Aligned_cols=53  Identities=15%  Similarity=0.134  Sum_probs=44.2

Q ss_pred             cccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhh-hcCCC-CCCCCCCCCcccccccC
Q 047746          109 ALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAA-MHQGV-VPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       109 ~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~r-iHtge-kPy~~~~~~~cg~~f~~  182 (247)
                      +|..|+++|++++||.|.                  .|++.| +...|..|++ +|+++ +||.|   ..|++.|..
T Consensus         2 s~~~H~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~~h~~~~~~~~C---~~C~~~f~~   57 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECY------------------ICHARFTQSGTMKMHILQKHTENVAKFHC---PHCDTVIAR   57 (77)
T ss_dssp             CCCCCCCCCSCCCSEECT------------------TTCCEESCHHHHHHHHHHHSSSSCSSEEC---SSSSCEESS
T ss_pred             CCCccccccCCCCCeECC------------------CcCchhCCHHHHHHHHHHhcCCCCCccCC---CCCCCccCC
Confidence            578999999999999998                  677899 8999999997 78875 78876   566776654

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.5e-10  Score=73.73  Aligned_cols=38  Identities=24%  Similarity=0.456  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.2e-10  Score=74.13  Aligned_cols=38  Identities=24%  Similarity=0.486  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.2e-10  Score=74.26  Aligned_cols=38  Identities=24%  Similarity=0.479  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            77899999999999999999999999999999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=7.7e-11  Score=74.83  Aligned_cols=42  Identities=17%  Similarity=0.347  Sum_probs=39.0

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCCCccccccccccC
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMG  131 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg  131 (247)
                      .++++++|.|.+|++.|.....|..|+++|+++++|.|.  .||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~--~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGP--SSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCC--CCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCc--CCC
Confidence            378899999999999999999999999999999999998  554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.96  E-value=1.4e-10  Score=73.95  Aligned_cols=39  Identities=23%  Similarity=0.426  Sum_probs=37.2

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      .++++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2el6_A            6 SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS   44 (46)
T ss_dssp             SSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            378899999999999999999999999999999999998

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.96  E-value=1.4e-10  Score=73.95  Aligned_cols=38  Identities=26%  Similarity=0.447  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ely_A            7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCC
T ss_pred             CCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            77899999999999999999999999999999999998

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.1e-10  Score=72.02  Aligned_cols=43  Identities=28%  Similarity=0.355  Sum_probs=38.1

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .|.++|++++||.|.                .+.|++.| +...|..|+++|++++||.|
T Consensus         2 ~~~~~H~~~k~~~C~----------------~~~C~k~f~~~~~L~~H~~~H~~~k~~~C   45 (48)
T 2ent_A            2 SSGSSGTGEKPFACT----------------WPGCGWRFSRSDELSRHRRSHSGVKPSGP   45 (48)
T ss_dssp             CCCCSSCCCCCEECC----------------SSSCCCEESSHHHHHHHHTTSCCCCSCSS
T ss_pred             CCCCCcCCCCCeECC----------------CCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            578999999999996                12578999 89999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.3e-10  Score=74.11  Aligned_cols=38  Identities=21%  Similarity=0.372  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            7 GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             SSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             cCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            77899999999999999999999999999999999998

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.2e-10  Score=74.18  Aligned_cols=38  Identities=21%  Similarity=0.425  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            7 GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.3e-10  Score=72.20  Aligned_cols=38  Identities=21%  Similarity=0.441  Sum_probs=36.1

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCCCccccc
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK  125 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C  125 (247)
                      .++++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            37789999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.4e-10  Score=73.91  Aligned_cols=38  Identities=24%  Similarity=0.444  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epz_A            7 GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence            77899999999999999999999999999999999998

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.2e-10  Score=74.20  Aligned_cols=38  Identities=26%  Similarity=0.468  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.1e-10  Score=73.14  Aligned_cols=38  Identities=26%  Similarity=0.552  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            77899999999999999999999999999999999996

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.95  E-value=1.3e-10  Score=73.84  Aligned_cols=38  Identities=21%  Similarity=0.373  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2el4_A            7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS   44 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred             CCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.95  E-value=1.6e-10  Score=73.58  Aligned_cols=38  Identities=24%  Similarity=0.398  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            7 GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            67899999999999999999999999999999999998

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.2e-10  Score=71.24  Aligned_cols=37  Identities=16%  Similarity=0.326  Sum_probs=35.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK  125 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C  125 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            6 SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             cCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            6789999999999999999999999999999999987

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.94  E-value=4.2e-10  Score=82.68  Aligned_cols=49  Identities=10%  Similarity=-0.025  Sum_probs=42.0

Q ss_pred             cccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccC
Q 047746          113 HQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       113 H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~  182 (247)
                      .+.++..+++|.|.                  .|||.| +...|..|+++|+++|||.|   ..|++.|.+
T Consensus        19 ~~~~~~~~~~h~C~------------------~Cgk~F~~~~~L~~H~~~H~~~k~~~C---~~C~k~F~~   68 (85)
T 2lv2_A           19 VLGLSASAECHLCP------------------VCGESFASKGAQERHLRLLHAAQVFPC---KYCPATFYS   68 (85)
T ss_dssp             CCSSCCCCTTEECT------------------TSCCEESSHHHHHHHHHTTSCSSSEEC---TTSSCEESS
T ss_pred             CCCCCCCCCCEECC------------------CCCCCcCcHHHHhhhhhhccCCCccCC---CCCCCEeCC
Confidence            35678888999998                  677999 89999999999999999987   778888765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.2e-10  Score=74.09  Aligned_cols=38  Identities=26%  Similarity=0.481  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ene_A            7 GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCC
T ss_pred             CCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.3e-10  Score=73.72  Aligned_cols=39  Identities=26%  Similarity=0.465  Sum_probs=37.1

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      .++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            378899999999999999999999999999999999996

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.8e-10  Score=73.30  Aligned_cols=39  Identities=23%  Similarity=0.484  Sum_probs=37.3

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      .++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCC
Confidence            378899999999999999999999999999999999998

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=4e-10  Score=69.90  Aligned_cols=38  Identities=18%  Similarity=0.340  Sum_probs=34.8

Q ss_pred             cccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          115 NAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       115 r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQ------------------ECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECS------------------SSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECC------------------CCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            679999999998                  677899 89999999999999999986

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.6e-10  Score=73.42  Aligned_cols=38  Identities=24%  Similarity=0.331  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eop_A            7 GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred             cCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.4e-10  Score=73.84  Aligned_cols=38  Identities=24%  Similarity=0.442  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq0_A            7 GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS   44 (46)
T ss_dssp             TTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred             CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=2.7e-11  Score=89.55  Aligned_cols=56  Identities=21%  Similarity=0.360  Sum_probs=48.9

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCcCchhHHHHhhhcCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGV  165 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F~~~~L~~H~riHtge  165 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||+|.  +|.                   +...|..|+++|.|.
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~--~~~-------------------~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAK--RQE-------------------RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCC--CCS-------------------CCCCCCCCCCCCCCS
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccc--hhh-------------------hHHHHHhhhcccccc
Confidence            77899999999999999999999999999999999998  332                   456777888999883

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.4e-10  Score=73.87  Aligned_cols=38  Identities=24%  Similarity=0.481  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eml_A            7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS   44 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred             cCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.7e-10  Score=73.33  Aligned_cols=38  Identities=26%  Similarity=0.517  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytr_A            7 GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            77899999999999999999999999999999999998

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=1.6e-10  Score=85.86  Aligned_cols=60  Identities=12%  Similarity=-0.005  Sum_probs=49.0

Q ss_pred             ccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc--CchhHHHHhhhcCC-CCCCCCCCCCccccc
Q 047746          103 KFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF--RSLGIKAHAAMHQG-VVPPQRPPDMRGGAR  179 (247)
Q Consensus       103 ~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F--~~~~L~~H~riHtg-ekPy~~~~~~~cg~~  179 (247)
                      .+.....+..|+++|+++++|.|.                  .|++.|  +...|..|+++|++ ++||.|   ..|++.
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~------------------~C~k~f~~~~~~L~~H~~~h~~~~~~~~C---~~C~k~   63 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCP------------------TCNVVTRKTLVGLKKHMEVCQKLQDALKC---QHCRKQ   63 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCT------------------TTCCCCSSCSHHHHHHHHHHHHHHHHHSC---SSSCCC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCC------------------CCCCChhhhHHHHHHHHHHHcCCCCCEEC---CCCCCc
Confidence            345556788999999999999998                  566777  36699999999999 999987   677888


Q ss_pred             ccCC
Q 047746          180 FEQG  183 (247)
Q Consensus       180 f~~~  183 (247)
                      |...
T Consensus        64 F~~~   67 (98)
T 2gqj_A           64 FKSK   67 (98)
T ss_dssp             CSCH
T ss_pred             cCCH
Confidence            7763

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.93  E-value=1.7e-10  Score=73.36  Aligned_cols=38  Identities=24%  Similarity=0.440  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em9_A            7 GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred             CCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCC
Confidence            77899999999999999999999999999999999998

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=1.8e-10  Score=73.55  Aligned_cols=39  Identities=18%  Similarity=0.340  Sum_probs=37.1

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      .++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            378899999999999999999999999999999999996

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.4e-10  Score=73.79  Aligned_cols=38  Identities=24%  Similarity=0.461  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A            7 GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             CCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.93  E-value=1.4e-10  Score=73.82  Aligned_cols=38  Identities=26%  Similarity=0.500  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ema_A            7 GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred             CCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.93  E-value=3.9e-10  Score=78.66  Aligned_cols=50  Identities=30%  Similarity=0.419  Sum_probs=43.4

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~  182 (247)
                      ++.++|++++||.|.                  .|++.| +...|..|+++|++++||.|   ..|++.|..
T Consensus         4 ~~~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~h~~~~~~~C---~~C~~~f~~   54 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCV------------------ECGKAFSRSSILVQHQRVHTGEKPYKC---LECGKAFSQ   54 (72)
T ss_dssp             CCCCTTTTCCCEECS------------------SSCCEESSHHHHHHHHHGGGCSCCEEC---SSSCCEESS
T ss_pred             CCCcccCCCCCccCC------------------CCCCccCCHHHHHHHHHhcCCCCCeEC---CCCCcccCC
Confidence            578899999999998                  677899 88999999999999999977   667777765

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.5e-10  Score=73.73  Aligned_cols=38  Identities=24%  Similarity=0.469  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep2_A            7 GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred             CCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2e-10  Score=73.35  Aligned_cols=38  Identities=26%  Similarity=0.481  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            77899999999999999999999999999999999997

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.5e-10  Score=73.65  Aligned_cols=38  Identities=21%  Similarity=0.475  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eq4_A            7 GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS   44 (46)
T ss_dssp             SSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCC
T ss_pred             CCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.6e-10  Score=73.55  Aligned_cols=38  Identities=24%  Similarity=0.505  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoq_A            7 GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS   44 (46)
T ss_dssp             SSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCC
T ss_pred             CCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.92  E-value=1.4e-10  Score=74.01  Aligned_cols=38  Identities=24%  Similarity=0.450  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emk_A            7 GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCC
T ss_pred             cCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.6e-10  Score=73.39  Aligned_cols=38  Identities=24%  Similarity=0.413  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A            7 GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             CCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.2e-10  Score=74.22  Aligned_cols=39  Identities=23%  Similarity=0.435  Sum_probs=37.3

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      .++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS   44 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            378899999999999999999999999999999999998

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.4e-10  Score=73.77  Aligned_cols=38  Identities=24%  Similarity=0.527  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A            7 GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            77899999999999999999999999999999999998

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.8e-10  Score=73.22  Aligned_cols=38  Identities=21%  Similarity=0.333  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epw_A            7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS   44 (46)
T ss_dssp             CCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred             CCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.9e-10  Score=73.35  Aligned_cols=38  Identities=24%  Similarity=0.448  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em5_A            7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCC
T ss_pred             CCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.4e-10  Score=73.83  Aligned_cols=38  Identities=21%  Similarity=0.455  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2yu8_A            7 GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS   44 (46)
T ss_dssp             CCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred             CCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            77899999999999999999999999999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.2e-10  Score=73.44  Aligned_cols=38  Identities=26%  Similarity=0.489  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (44)
T 2emx_A            5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS   42 (44)
T ss_dssp             CSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCC
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=2.5e-10  Score=71.26  Aligned_cols=37  Identities=19%  Similarity=0.395  Sum_probs=35.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK  125 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C  125 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            6789999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.4e-10  Score=73.73  Aligned_cols=38  Identities=32%  Similarity=0.459  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emm_A            7 GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSS
T ss_pred             cCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.9e-10  Score=73.25  Aligned_cols=38  Identities=24%  Similarity=0.420  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            7 GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999997

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.3e-10  Score=72.82  Aligned_cols=38  Identities=24%  Similarity=0.454  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            7 GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            67899999999999999999999999999999999997

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2e-10  Score=72.99  Aligned_cols=38  Identities=26%  Similarity=0.510  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eme_A            7 GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             TCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSC
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.6e-10  Score=73.54  Aligned_cols=38  Identities=21%  Similarity=0.408  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             TSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             CCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.3e-10  Score=72.79  Aligned_cols=38  Identities=29%  Similarity=0.390  Sum_probs=36.5

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            7 GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999996

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.5e-10  Score=73.68  Aligned_cols=38  Identities=24%  Similarity=0.420  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emy_A            7 GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS   44 (46)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred             CCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.91  E-value=2.4e-10  Score=78.15  Aligned_cols=50  Identities=6%  Similarity=-0.028  Sum_probs=42.3

Q ss_pred             ccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccCC
Q 047746          110 LGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQG  183 (247)
Q Consensus       110 L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~~  183 (247)
                      |..|+++|++++||.|.                  .||+.| +...|.   ++|++++||.|   ..||+.|...
T Consensus         2 L~~h~~~H~~~k~~~C~------------------~C~k~F~~~~~l~---~~H~~~k~~~C---~~C~k~f~~~   52 (62)
T 1vd4_A            2 IETDERDSTNRASFKCP------------------VCSSTFTDLEANQ---LFDPMTGTFRC---TFCHTEVEED   52 (62)
T ss_dssp             CCCCSSSCCSSSEEECS------------------SSCCEEEHHHHHH---HEETTTTEEBC---SSSCCBCEEC
T ss_pred             hhhHHHHcCCCCCccCC------------------CCCchhccHHHhH---hhcCCCCCEEC---CCCCCccccC
Confidence            67899999999999998                  667888 666775   89999999987   7788888753

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.91  E-value=1.9e-10  Score=71.69  Aligned_cols=38  Identities=21%  Similarity=0.400  Sum_probs=36.1

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            67899999999999999999999999999999999984

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.5e-10  Score=73.67  Aligned_cols=38  Identities=26%  Similarity=0.464  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ysp_A            7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS   44 (46)
T ss_dssp             CSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.9e-10  Score=73.26  Aligned_cols=38  Identities=26%  Similarity=0.433  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|+|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            7 GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            77899999999999999999999999999999999996

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.5e-10  Score=72.65  Aligned_cols=38  Identities=26%  Similarity=0.516  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999997

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.4e-10  Score=72.68  Aligned_cols=38  Identities=24%  Similarity=0.487  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            7 GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            67899999999999999999999999999999999997

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.90  E-value=7.8e-10  Score=69.57  Aligned_cols=38  Identities=8%  Similarity=0.045  Sum_probs=35.0

Q ss_pred             cccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          115 NAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       115 r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            3 SGSSGNGAFFCN------------------ECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCSSSCCBCCS------------------SSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCcCCCCCEECC------------------CCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            579999999998                  677899 89999999999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.4e-10  Score=74.10  Aligned_cols=38  Identities=21%  Similarity=0.392  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             CSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            77899999999999999999999999999999999998

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.3e-10  Score=71.94  Aligned_cols=38  Identities=26%  Similarity=0.355  Sum_probs=36.2

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            7 GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            67899999999999999999999999999999999984

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2e-10  Score=73.02  Aligned_cols=38  Identities=26%  Similarity=0.436  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eov_A            7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS   44 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSC
T ss_pred             CCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.1e-10  Score=73.00  Aligned_cols=38  Identities=24%  Similarity=0.526  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en1_A            7 GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.7e-10  Score=73.38  Aligned_cols=38  Identities=18%  Similarity=0.409  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytd_A            7 GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS   44 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred             cCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.8e-10  Score=72.51  Aligned_cols=38  Identities=24%  Similarity=0.516  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            7 GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999997

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.1e-10  Score=72.30  Aligned_cols=38  Identities=21%  Similarity=0.372  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCcccccccc-ccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQN-AHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r-~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|++ +|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~   45 (47)
T 2epx_A            7 GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS   45 (47)
T ss_dssp             CCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred             cCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence            778999999999999999999999999 99999999998

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.3e-10  Score=73.93  Aligned_cols=38  Identities=26%  Similarity=0.451  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A            7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.7e-10  Score=73.49  Aligned_cols=38  Identities=18%  Similarity=0.352  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yso_A            7 GSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPS   44 (46)
T ss_dssp             SSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred             cCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.7e-10  Score=73.40  Aligned_cols=38  Identities=21%  Similarity=0.439  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytk_A            7 GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred             CCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.4e-10  Score=72.13  Aligned_cols=38  Identities=24%  Similarity=0.522  Sum_probs=36.5

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            7 GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            67899999999999999999999999999999999997

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.3e-10  Score=72.89  Aligned_cols=38  Identities=24%  Similarity=0.530  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            7 GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            77899999999999999999999999999999999996

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.8e-10  Score=72.42  Aligned_cols=38  Identities=26%  Similarity=0.475  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            7 GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999996

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.89  E-value=2e-10  Score=72.35  Aligned_cols=38  Identities=18%  Similarity=0.359  Sum_probs=36.5

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            77899999999999999999999999999999999996

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.4e-10  Score=71.14  Aligned_cols=38  Identities=21%  Similarity=0.414  Sum_probs=36.0

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999883

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.7e-10  Score=72.34  Aligned_cols=38  Identities=24%  Similarity=0.488  Sum_probs=36.5

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            7 GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            67899999999999999999999999999999999996

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.4e-10  Score=72.76  Aligned_cols=38  Identities=26%  Similarity=0.515  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            7 GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             cCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            67899999999999999999999999999999999996

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.5e-10  Score=73.83  Aligned_cols=38  Identities=18%  Similarity=0.353  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em8_A            7 GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS   44 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred             CCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            77899999999999999999999999999999999998

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.5e-10  Score=73.86  Aligned_cols=38  Identities=26%  Similarity=0.457  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoo_A            7 GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS   44 (46)
T ss_dssp             CSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred             CCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.6e-10  Score=73.58  Aligned_cols=38  Identities=26%  Similarity=0.428  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emp_A            7 GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCC
T ss_pred             cCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999998

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3e-10  Score=72.13  Aligned_cols=38  Identities=24%  Similarity=0.437  Sum_probs=36.5

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999996

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=2e-10  Score=73.22  Aligned_cols=38  Identities=24%  Similarity=0.444  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            7 GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             cCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            77899999999999999999999999999999999996

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.5e-10  Score=72.12  Aligned_cols=37  Identities=16%  Similarity=0.332  Sum_probs=35.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK  125 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C  125 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            6789999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.5e-10  Score=73.65  Aligned_cols=38  Identities=24%  Similarity=0.524  Sum_probs=36.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en6_A            7 GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCC
Confidence            77899999999999999999999999999999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=9.4e-10  Score=69.68  Aligned_cols=39  Identities=23%  Similarity=0.344  Sum_probs=35.1

Q ss_pred             cccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCC
Q 047746          115 NAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRP  171 (247)
Q Consensus       115 r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~  171 (247)
                      .+|++++||.|.                  .|++.| +...|..|+++|++++||.|+
T Consensus         3 ~~h~~~k~~~C~------------------~C~k~f~~~~~l~~H~~~H~~~~~~~C~   42 (45)
T 2epq_A            3 SGSSGEKPYSCP------------------VCGLRFKRKDRMSYHVRSHDGSVGKSGP   42 (45)
T ss_dssp             CCCSSCCSSEET------------------TTTEECSCHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCcCCCCCCcCC------------------CCCcccCCHHHHHHHHHHccCCCCCCCc
Confidence            479999999998                  667889 899999999999999999883

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.88  E-value=2.2e-10  Score=71.31  Aligned_cols=37  Identities=16%  Similarity=0.320  Sum_probs=35.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK  125 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C  125 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            6789999999999999999999999999999999987

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=2.5e-10  Score=72.51  Aligned_cols=38  Identities=26%  Similarity=0.483  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            7 GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999997

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=2.5e-10  Score=71.88  Aligned_cols=38  Identities=21%  Similarity=0.367  Sum_probs=36.2

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            7 GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             cCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999984

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=3.4e-10  Score=71.29  Aligned_cols=38  Identities=18%  Similarity=0.382  Sum_probs=36.2

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            7 GHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            67899999999999999999999999999999999984

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=2.6e-10  Score=72.70  Aligned_cols=38  Identities=29%  Similarity=0.569  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            77899999999999999999999999999999999996

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.87  E-value=2.3e-10  Score=72.93  Aligned_cols=38  Identities=29%  Similarity=0.492  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999996

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=3.2e-10  Score=72.01  Aligned_cols=38  Identities=24%  Similarity=0.453  Sum_probs=36.5

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            7 GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999996

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=3.6e-10  Score=71.22  Aligned_cols=38  Identities=24%  Similarity=0.416  Sum_probs=36.2

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            7 GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            67899999999999999999999999999999999884

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=2.4e-10  Score=72.63  Aligned_cols=38  Identities=26%  Similarity=0.500  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            7 GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             SCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999997

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=2.8e-10  Score=71.84  Aligned_cols=38  Identities=24%  Similarity=0.310  Sum_probs=36.2

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            7 GAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            67899999999999999999999999999999999984

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.86  E-value=5.8e-11  Score=91.85  Aligned_cols=67  Identities=15%  Similarity=0.014  Sum_probs=42.4

Q ss_pred             CcccccCcCCcccC------CCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746           92 PRVFSCNYCRRKFY------SSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus        92 ekpf~C~~Cgk~F~------~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      ++.|.|++|.+.|.      ....|..|+ .|++++||.|.                  .||+.| +...|..|+++|  
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~------------------~C~k~f~~~~~l~~H~~~H--   97 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCP------------------LCLMPFSSSVSLKQHIRYT--   97 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECT------------------TTCCEESSHHHHHHHHHHT--
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECC------------------CCCcccCCHhHHHHHHHHC--
Confidence            45667777666555      334444554 57777777776                  556777 677777777777  


Q ss_pred             CCCCCCCCCCcccccccC
Q 047746          165 VVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       165 ekPy~~~~~~~cg~~f~~  182 (247)
                      ++||.|   ..|++.|..
T Consensus        98 ~~~~~C---~~C~k~f~~  112 (129)
T 2wbt_A           98 EHTKVC---PVCKKEFTS  112 (129)
T ss_dssp             CCCCBC---TTTCCBCSS
T ss_pred             CCCCCC---CCCCcccCC
Confidence            677655   445555543

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=3.6e-10  Score=71.21  Aligned_cols=38  Identities=26%  Similarity=0.461  Sum_probs=36.1

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            77899999999999999999999999999999999883

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.86  E-value=8.6e-10  Score=77.70  Aligned_cols=64  Identities=14%  Similarity=0.033  Sum_probs=52.9

Q ss_pred             cCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhh-hcCCCCCCCCCCCCc--ccccccCC-CC------
Q 047746          117 HKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAA-MHQGVVPPQRPPDMR--GGARFEQG-YF------  185 (247)
Q Consensus       117 Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~r-iHtgekPy~~~~~~~--cg~~f~~~-~l------  185 (247)
                      .+++++|.|.                ++.|++.| +...|..|++ +|++++||.|   ..  |++.|... .|      
T Consensus         2 s~~~~~~~C~----------------~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C---~~~~C~k~f~~~~~L~~H~~~   62 (79)
T 2dlk_A            2 SSGSSGMPCD----------------FPGCGRIFSNRQYLNHHKKYQHIHQKSFSC---PEPACGKSFNFKKHLKEHMKL   62 (79)
T ss_dssp             CSCCSSEECS----------------STTTCCEESSHHHHHHHHHHGGGSCCCEEC---SCTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCccCC----------------CCCCcCccCCHHHHHHHHHHHhCCCCCeEC---CCCCCcCccCCHHHHHHHHHH
Confidence            3678999997                22478999 8999999999 7999999998   55  99999874 22      


Q ss_pred             ---CCCccccCCCCccc
Q 047746          186 ---AMPMFMEDDDIDLF  199 (247)
Q Consensus       186 ---~~P~~~~~c~~~f~  199 (247)
                         .+||.|..|++.|.
T Consensus        63 H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           63 HSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             HHTSCCCSCCSSSCCCC
T ss_pred             hCCCCCeeCCCCCCCCC
Confidence               38999999999873

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.85  E-value=3.1e-10  Score=69.77  Aligned_cols=38  Identities=45%  Similarity=0.949  Sum_probs=34.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            35689999999999999999999999999999999874

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=3e-10  Score=71.38  Aligned_cols=38  Identities=26%  Similarity=0.461  Sum_probs=36.2

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            7 GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999984

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=2.9e-10  Score=72.42  Aligned_cols=38  Identities=26%  Similarity=0.469  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            7 GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            67899999999999999999999999999999999997

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=2.7e-10  Score=72.48  Aligned_cols=38  Identities=24%  Similarity=0.510  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999996

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=3.1e-10  Score=72.31  Aligned_cols=38  Identities=21%  Similarity=0.447  Sum_probs=36.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            77899999999999999999999999999999999997

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=4.9e-10  Score=71.35  Aligned_cols=38  Identities=26%  Similarity=0.541  Sum_probs=36.4

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCC-Ccccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKR-ERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htg-ekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++ ++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             cCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6789999999999999999999999999999 9999996

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.84  E-value=6.3e-10  Score=83.02  Aligned_cols=58  Identities=7%  Similarity=-0.070  Sum_probs=49.6

Q ss_pred             ccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-C-chhHHHHhhhcCCCCCCCCCCCCcccccc
Q 047746          103 KFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-R-SLGIKAHAAMHQGVVPPQRPPDMRGGARF  180 (247)
Q Consensus       103 ~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~-~~~L~~H~riHtgekPy~~~~~~~cg~~f  180 (247)
                      .|.....|..|+++|+++++|.|.                  .|++.| . ...|+.|+++| +++||.|   ..|++.|
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~------------------~C~k~F~~~~~~L~~H~~~h-~~k~~~C---~~Cgk~F   72 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCP------------------TCQAVGRKTIEGLKKHMENC-KQEMFTC---HHCGKQL   72 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECT------------------TTCSCEESSHHHHHHHHHHH-CCCCCCC---SSSCCCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCC------------------CCCCCcccCHHHHHHHHHHH-CCCCeEC---CCCCCee
Confidence            567778889999999999999998                  567888 4 77999999999 9999977   6777777


Q ss_pred             cC
Q 047746          181 EQ  182 (247)
Q Consensus       181 ~~  182 (247)
                      ..
T Consensus        73 ~~   74 (96)
T 2ctd_A           73 RS   74 (96)
T ss_dssp             SS
T ss_pred             CC
Confidence            65

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=4.1e-10  Score=71.51  Aligned_cols=38  Identities=24%  Similarity=0.473  Sum_probs=36.5

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            7 GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             SCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999996

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.9e-10  Score=72.44  Aligned_cols=38  Identities=29%  Similarity=0.489  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            7 GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999996

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.83  E-value=1.6e-09  Score=69.66  Aligned_cols=43  Identities=16%  Similarity=0.281  Sum_probs=37.2

Q ss_pred             cccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccc
Q 047746          115 NAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGA  178 (247)
Q Consensus       115 r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~  178 (247)
                      ..|+++++|.|.                  .|++.| +...|..|+++|++++||.|   ..|+|
T Consensus         5 ~~~~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~C---~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACE------------------ICGKIFRDVYHLNRHKLSHSGEKPYSS---GPSSG   48 (48)
T ss_dssp             SCCCCCCSEEET------------------TTTEEESSHHHHHHHGGGSCSCCCCCS---CCCCC
T ss_pred             CCCCCCcCeeCC------------------CCCcccCCHHHHHHHHHhcCCCCCccC---CCCCC
Confidence            458899999998                  677899 89999999999999999988   66664

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.8e-10  Score=72.28  Aligned_cols=38  Identities=24%  Similarity=0.487  Sum_probs=36.5

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             cCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            67899999999999999999999999999999999996

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.7e-10  Score=72.57  Aligned_cols=38  Identities=32%  Similarity=0.583  Sum_probs=36.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            7 GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             SSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            77899999999999999999999999999999999996

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=6.6e-10  Score=70.16  Aligned_cols=37  Identities=19%  Similarity=0.334  Sum_probs=35.5

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK  125 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C  125 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            7 GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            7789999999999999999999999999999999987

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=2.3e-09  Score=76.05  Aligned_cols=39  Identities=18%  Similarity=0.065  Sum_probs=33.6

Q ss_pred             ccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHh-hhcCCCCCCCC
Q 047746          116 AHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHA-AMHQGVVPPQR  170 (247)
Q Consensus       116 ~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~-riHtgekPy~~  170 (247)
                      .+++||||+|..                +.|+|+| +.++|+.|+ |+|+++|||-|
T Consensus        21 ~~sGEKPYkC~~----------------~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           21 RYSPYRPYRCVH----------------QGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SSCSSCSCBCCS----------------TTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cccCCCCeECCC----------------CCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            478999999972                2477999 899999997 69999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3.4e-10  Score=72.03  Aligned_cols=38  Identities=26%  Similarity=0.375  Sum_probs=36.5

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            7 GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             SCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67899999999999999999999999999999999996

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.1e-09  Score=69.93  Aligned_cols=39  Identities=23%  Similarity=0.458  Sum_probs=37.0

Q ss_pred             CCCCCcccccC--cCCcccCCCccccccccccCCCcccccc
Q 047746           88 AATVPRVFSCN--YCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        88 ~~tgekpf~C~--~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      .++++++|.|.  +|++.|.....|..|+++|++++||+|.
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   46 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS   46 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            37889999998  8999999999999999999999999998

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.79  E-value=2.9e-11  Score=87.68  Aligned_cols=67  Identities=18%  Similarity=0.174  Sum_probs=57.5

Q ss_pred             CccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccCC-CC--------CCCc
Q 047746          120 ERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQG-YF--------AMPM  189 (247)
Q Consensus       120 ekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~~-~l--------~~P~  189 (247)
                      ||||.|.                  .|++.| ....|..|+++|++++||.|   ..|++.|... .|        +.||
T Consensus         1 ek~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C---~~C~k~f~~~~~L~~H~~~h~~~~~   59 (88)
T 1llm_C            1 MKPFQCR------------------ICMRNFSRSDHLTTHIRTHTGEKPFAC---DICGRKFARSDERKRHRDIQHILPI   59 (88)
T ss_dssp             CCCEECT------------------TTCCEESCHHHHHHHHHHHHCCCCEEC---TTTCCEESSHHHHHHHHHHHTHHHH
T ss_pred             CCCCcCC------------------CCCCccCCHHHHHHHHHHcCCCCCccC---CCCCCccCCHHHHHHHHHHhCCCcc
Confidence            5789888                  677899 88999999999999999988   7899999874 22        3689


Q ss_pred             cccCCCCccccCCCceec
Q 047746          190 FMEDDDIDLFWPGSFRQV  207 (247)
Q Consensus       190 ~~~~c~~~f~~~~s~~~~  207 (247)
                      .|..|++.|.+...|..|
T Consensus        60 ~c~~C~~~f~~~~~L~~H   77 (88)
T 1llm_C           60 LEDKVEELLSKNYHLENE   77 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhhHHH
Confidence            999999999988887765

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=8e-10  Score=78.42  Aligned_cols=38  Identities=24%  Similarity=0.245  Sum_probs=35.5

Q ss_pred             CCCCcccccCc--CCcccCCCccccccc-cccCCCcccccc
Q 047746           89 ATVPRVFSCNY--CRRKFYSSQALGGHQ-NAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~--Cgk~F~~~~~L~~H~-r~Htgekp~~C~  126 (247)
                      .+++|||+|.+  |+|.|...++|..|+ ++|+++|||.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            67899999976  999999999999997 789999999997

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.74  E-value=4.1e-09  Score=64.59  Aligned_cols=36  Identities=14%  Similarity=0.160  Sum_probs=31.9

Q ss_pred             cCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          117 HKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       117 Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      |++++||.|.                  .||+.| +...|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCS------------------FCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECT------------------TTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECC------------------CCCcccCCHHHHHHHHHHcCCCcccee
Confidence            6889999998                  677899 89999999999999999975

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3.6e-09  Score=63.78  Aligned_cols=36  Identities=17%  Similarity=0.182  Sum_probs=32.4

Q ss_pred             ccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746          114 QNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus       114 ~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      +++|++++||.|.                  .|++.| +...|..|+++|+++||
T Consensus         1 ~~~h~~~k~~~C~------------------~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCP------------------VCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEET------------------TTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCC------------------CCCCccCCHHHHHHHHHHHcCCCC
Confidence            4689999999998                  677899 89999999999999986

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.73  E-value=6.5e-09  Score=62.63  Aligned_cols=36  Identities=19%  Similarity=0.156  Sum_probs=32.6

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      +|+++|++++||.|.                  .|++.| +...|..|+++|+++
T Consensus         1 ~H~~~h~~~k~~~C~------------------~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCP------------------DCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCT------------------TTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCCccCC------------------CCCcccCcHHHHHHHHHHhccC
Confidence            489999999999998                  677899 899999999999985

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.73  E-value=2.4e-09  Score=72.96  Aligned_cols=48  Identities=13%  Similarity=0.055  Sum_probs=40.5

Q ss_pred             ccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhh-c-CCCCCCCCCCCCcccccccC
Q 047746          114 QNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAM-H-QGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       114 ~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~ri-H-tgekPy~~~~~~~cg~~f~~  182 (247)
                      +++|++++||.|.                  .|++.| +...|..|+++ | ++++||.|   ..|++.|..
T Consensus         2 ~~~h~~~k~~~C~------------------~C~k~f~~~~~l~~H~~~~H~~~~~~~~C---~~C~k~f~~   52 (66)
T 2drp_A            2 EFTKEGEHTYRCK------------------VCSRVYTHISNFCRHYVTSHKRNVKVYPC---PFCFKEFTR   52 (66)
T ss_dssp             -CEEEETTEEECT------------------TTCCEESSHHHHHHHHHHHSSSSCCCEEC---TTTCCEESC
T ss_pred             ccccCCCcceECC------------------CCcchhCCHHHHHHHHHHHcCCCCcCeEC---CCCCCccCC
Confidence            4689999999998                  677899 88999999998 8 68999987   678888765

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.71  E-value=5.2e-09  Score=72.35  Aligned_cols=46  Identities=9%  Similarity=-0.035  Sum_probs=40.2

Q ss_pred             ccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccC
Q 047746          116 AHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       116 ~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~  182 (247)
                      .|+++++|.|.                  .|++.| +...|..|+++|++++||.|   ..|++.|..
T Consensus         3 s~~~~~~~~C~------------------~C~k~f~~~~~L~~H~~~H~~~~~~~C---~~C~~~f~~   49 (70)
T 1x5w_A            3 SGSSGHPEKCS------------------ECSYSCSSKAALRIHERIHCTDRPFKC---NYCSFDTKQ   49 (70)
T ss_dssp             SCCCCCSEECS------------------SSSCEESSHHHHHHHHGGGCCSCSEEC---SSSSCEESS
T ss_pred             CCCCCCCeECC------------------CCCcccCCHHHHHHHHHHcCCCCCEeC---CCCCCccCC
Confidence            58899999998                  677899 88999999999999999987   678888765

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.70  E-value=9.9e-09  Score=72.23  Aligned_cols=53  Identities=23%  Similarity=0.283  Sum_probs=44.7

Q ss_pred             ccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccCC
Q 047746          110 LGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQG  183 (247)
Q Consensus       110 L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~~  183 (247)
                      ...+...+.++++|.|.                  .|++.| ....|..|+++|++++||.|   ..|++.|...
T Consensus         6 ~~~~~~~~~~~~~~~C~------------------~C~~~f~~~~~l~~H~~~h~~~~~~~C---~~C~~~f~~~   59 (77)
T 2cot_A            6 SGRSEWQQRERRRYKCD------------------ECGKSFSHSSDLSKHRRTHTGEKPYKC---DECGKAFIQR   59 (77)
T ss_dssp             CCCCCSCCCCSCSSBCS------------------SSCCBCSCHHHHHHHHTTTCCSCSEEC---SSSCCEESSH
T ss_pred             CCCCcCcCCCCCCEECC------------------CCCcccCCHHHHHHHHHHcCCCcCeeC---CCCCCccCCH
Confidence            34556678899999998                  677899 88999999999999999987   7788888763

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.69  E-value=1.1e-09  Score=77.70  Aligned_cols=57  Identities=16%  Similarity=0.162  Sum_probs=49.0

Q ss_pred             CCCCcccccCc--CCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcC
Q 047746           89 ATVPRVFSCNY--CRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus        89 ~tgekpf~C~~--Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHt  163 (247)
                      ++++++|.|.+  |++.|.....|..|+++|++   |.|.  .++             .|++.| ....|..|+++|+
T Consensus        26 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~--~~~-------------~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           26 HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCK--KDD-------------SCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECC--SCS-------------SCCCEESSHHHHHHHHHHCC
T ss_pred             hCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCC--CCC-------------CCCCccCCHHHHHHHHHhcC
Confidence            45678999999  99999999999999999998   8887  321             278899 8899999999985

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=3.6e-09  Score=74.62  Aligned_cols=46  Identities=15%  Similarity=0.174  Sum_probs=38.2

Q ss_pred             ccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC---CCCCCCCCCCcccccccC
Q 047746          116 AHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG---VVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       116 ~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg---ekPy~~~~~~~cg~~f~~  182 (247)
                      +|++++||.|.                  .|++.| +...|..|+++|++   ++||.|   ..|++.|..
T Consensus         1 ~h~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C---~~C~k~f~~   50 (78)
T 2d9h_A            1 GSSGSSGLQCE------------------ICGFTCRQKASLNWHQRKHAETVAALRFPC---EFCGKRFEK   50 (78)
T ss_dssp             CCCSCCCEECS------------------SSCCEESSHHHHHHHHHHHHHHTTTCCEEC---TTTCCEESS
T ss_pred             CCCCCcCeECC------------------CCCCeeCCHHHHHHHHHHhhccCCCcccCC---CCCCchhCC
Confidence            48999999998                  677899 89999999999996   788866   556666654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.68  E-value=1.8e-09  Score=64.12  Aligned_cols=33  Identities=24%  Similarity=0.459  Sum_probs=31.0

Q ss_pred             cccccCcCCcccCCCccccccccccCCCccccc
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK  125 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C  125 (247)
                      |||.|.+|++.|.....|..|+++|++++||++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            589999999999999999999999999999864

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.68  E-value=2.9e-09  Score=62.69  Aligned_cols=31  Identities=26%  Similarity=0.481  Sum_probs=29.7

Q ss_pred             cccccCcCCcccCCCccccccccccCCCccc
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRERTM  123 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~  123 (247)
                      |||.|.+|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999999987

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.66  E-value=7e-09  Score=68.45  Aligned_cols=43  Identities=16%  Similarity=0.091  Sum_probs=34.3

Q ss_pred             CCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccC
Q 047746          119 RERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       119 gekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~  182 (247)
                      |++||.|.                  .|++.| ....|..|+++|++++||.|   ..|++.|..
T Consensus         1 g~~~~~C~------------------~C~~~f~~~~~l~~H~~~h~~~~~~~C---~~C~~~f~~   44 (57)
T 3uk3_C            1 GSSSRECS------------------YCGKFFRSNYYLNIHLRTHTGEKPYKC---EFCEYAAAQ   44 (57)
T ss_dssp             ----CBCT------------------TTCCBCSCHHHHHHHHHHHHCCCCEEC---SSSSCEESS
T ss_pred             CCCCccCC------------------CCcchhCChHHHHHHHHHcCCCCCcCC---CCCcchhCC
Confidence            57899888                  677999 88999999999999999987   678888865

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.66  E-value=3.7e-09  Score=62.92  Aligned_cols=34  Identities=21%  Similarity=0.412  Sum_probs=32.1

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERT  122 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp  122 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            6789999999999999999999999999999885

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.64  E-value=3.8e-09  Score=62.65  Aligned_cols=34  Identities=24%  Similarity=0.387  Sum_probs=32.0

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERT  122 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp  122 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5678999999999999999999999999999885

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.63  E-value=1.5e-08  Score=70.72  Aligned_cols=47  Identities=17%  Similarity=0.277  Sum_probs=40.3

Q ss_pred             cccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccC
Q 047746          115 NAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       115 r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~  182 (247)
                      ..+.++++|.|.                  .|++.| +...|..|+++|++++||.|   ..|++.|..
T Consensus        10 ~~~~~~~~~~C~------------------~C~k~f~~~~~l~~H~~~H~~~~~~~C---~~C~k~f~~   57 (74)
T 2lce_A           10 HMTHSDKPYKCD------------------RCQASFRYKGNLASHKTVHTGEKPYRC---NICGAQFNR   57 (74)
T ss_dssp             -CCCCCCSBCCT------------------TSSCCBSCHHHHHHHHHHHCCCCSEEC---TTTCCEESC
T ss_pred             cccCCCCCeECC------------------CCCceeCCHHHHHHHHHHcCCCCCEEC---CCCCchhCC
Confidence            457889999998                  677899 88999999999999999987   678888875

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.62  E-value=5.8e-09  Score=71.10  Aligned_cols=45  Identities=16%  Similarity=0.094  Sum_probs=37.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLA  141 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s  141 (247)
                      ++++++|.|++|++.|.....|.   ++|++++||.|.  .|+   +.|....
T Consensus         9 H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~--~C~---k~f~~~~   53 (62)
T 1vd4_A            9 STNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCT--FCH---TEVEEDE   53 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCS--SSC---CBCEECT
T ss_pred             cCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECC--CCC---CccccCc
Confidence            77899999999999999988886   899999999999  566   4444433

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.61  E-value=1.8e-08  Score=59.82  Aligned_cols=34  Identities=21%  Similarity=0.286  Sum_probs=30.7

Q ss_pred             ccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746          116 AHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus       116 ~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      +|++++||.|.                  .|++.| +...|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~------------------~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCR------------------ICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECS------------------SSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCC------------------CCCcccCCHHHHHHHHHHcCCCCC
Confidence            58899999998                  677899 89999999999999986

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.61  E-value=1.7e-08  Score=59.72  Aligned_cols=34  Identities=15%  Similarity=0.184  Sum_probs=30.7

Q ss_pred             ccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCC
Q 047746          116 AHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus       116 ~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      +|++++||.|.                  .|++.| +...|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCA------------------LCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECS------------------SSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECC------------------CCcchhCCHHHHHHHHHHHcCCCC
Confidence            58899999998                  677899 89999999999999986

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=1.1e-08  Score=70.48  Aligned_cols=50  Identities=22%  Similarity=0.160  Sum_probs=34.9

Q ss_pred             CCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccCC
Q 047746          106 SSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQG  183 (247)
Q Consensus       106 ~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~~  183 (247)
                      ....|..|+++|++++||.|.                  .|++.| ....|..       ++||.|   ..|++.|...
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~------------------~C~k~f~~~~~l~~-------~~~~~C---~~C~~~f~~~   52 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCS------------------KCGIIFIRRSTLSR-------RKTPMC---EKCRKDSCQE   52 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECS------------------SSCCEEECCCCCCC-------SSSCCC---HHHHHTCSCC
T ss_pred             cchhHHHHHHHhCCCCCeeCC------------------cccchhCCHHHhCc-------CCCCCC---CCCChhhcCH
Confidence            356788888888888888888                  445566 5555543       677766   6777777653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=4e-09  Score=63.59  Aligned_cols=34  Identities=21%  Similarity=0.514  Sum_probs=32.3

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERT  122 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp  122 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            6789999999999999999999999999999986

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=3e-09  Score=75.86  Aligned_cols=59  Identities=17%  Similarity=0.126  Sum_probs=51.8

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCcCchhHHHHhhhcCCCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVP  167 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F~~~~L~~H~riHtgekP  167 (247)
                      +.++|+|.|.+|++.|. ...|..|+ .|.+++|+.|.                  .|++.|....|..|+++|++++.
T Consensus        12 ~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~------------------~C~~~~~~~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A           12 ECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCG------------------NCGRNVLVKDLKTHPEVCGREGS   70 (75)
T ss_dssp             CCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECS------------------SSCCEEETTGGGTHHHHBTTBSS
T ss_pred             cCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcc------------------cCCCcCcHHHHHHHHHHccCCcC
Confidence            57799999999999995 88999999 89999999998                  46677755899999999998854

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.59  E-value=1.5e-08  Score=70.37  Aligned_cols=54  Identities=20%  Similarity=0.181  Sum_probs=42.3

Q ss_pred             cccc-ccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccC
Q 047746          110 LGGH-QNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       110 L~~H-~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~  182 (247)
                      |..| ..+|.++++|.|..                ..|++.| ....|..|+++|++++||.|   ..|++.|..
T Consensus         6 ~~~~~~~~~~~~~~~~C~~----------------~~C~k~f~~~~~l~~H~~~h~~~~~~~C---~~C~~~f~~   61 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPV----------------ESCDRRFSRSDELTRHIRIHTGQKPFQC---RICMRNFSR   61 (73)
T ss_dssp             --CTTSCCCCCCCCEECSS----------------TTBCCEESSHHHHHHHHHHHHCCCCEEC---TTTCCEESC
T ss_pred             ccchhhccCCCCCccCCcC----------------CCCCCccCCHHHHHHHHHhhCCCCCeEC---CCCCchhCC
Confidence            4444 45689999999961                1477899 88999999999999999987   678888765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=1.6e-08  Score=61.28  Aligned_cols=37  Identities=16%  Similarity=0.187  Sum_probs=31.7

Q ss_pred             cCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCC
Q 047746          117 HKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQ  169 (247)
Q Consensus       117 Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~  169 (247)
                      |++++||.|..                +.|++.| +...|..|+++|++++||.
T Consensus         1 H~~~k~~~C~~----------------~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTA----------------PGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCC----------------TTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCC----------------CCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            68899999981                2377999 8999999999999999983

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.56  E-value=7.5e-09  Score=76.24  Aligned_cols=42  Identities=10%  Similarity=0.074  Sum_probs=37.1

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      ..|.++|++++||.|.                  .|++.| +...|..|+++|++++||.|
T Consensus        14 ~~~~~~H~~~kpy~C~------------------~C~k~F~~~~~L~~H~~~Ht~ekp~~C   56 (88)
T 1x6f_A           14 ILGNGPRLQNSTYQCK------------------HCDSKLQSTAELTSHLNIHNEEFQKRA   56 (88)
T ss_dssp             CCCCCSCCCCSCEECS------------------SSCCEESSHHHHHHHHHHHHHHHHHHC
T ss_pred             eccccccCCCCCCcCC------------------CCCCEeCCHHHHHHHHHHhCCCCCccc
Confidence            3456779999999998                  677899 88999999999999999988

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.53  E-value=3.3e-08  Score=63.39  Aligned_cols=42  Identities=17%  Similarity=0.120  Sum_probs=34.4

Q ss_pred             cccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746          109 ALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       109 ~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .+..|...|++++||.|..                +.|||.| +...|..|+++|+|+|
T Consensus         5 ~~~~~~~~H~~~k~~~C~~----------------~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLF----------------PGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCEEETTTEEECCC----------------TTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHHhccCCCCCeECCC----------------CCCCCccCCHHHHHHHHHHccCCC
Confidence            4456667899999999951                1477999 8999999999999986

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.53  E-value=6.4e-09  Score=68.58  Aligned_cols=36  Identities=14%  Similarity=0.206  Sum_probs=33.9

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMA  124 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~  124 (247)
                      ++++++|.|.+|++.|.....|..|+++|++++||+
T Consensus        19 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A           19 SQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             HTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            567899999999999999999999999999999984

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=1e-08  Score=63.97  Aligned_cols=33  Identities=15%  Similarity=0.239  Sum_probs=30.5

Q ss_pred             CCCCcccccCc--CCcccCCCccccccccccCCCc
Q 047746           89 ATVPRVFSCNY--CRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        89 ~tgekpf~C~~--Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++++|||+|.+  |+|.|.....|..|+++|+++.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            67899999986  9999999999999999999873

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=1.6e-08  Score=60.61  Aligned_cols=33  Identities=21%  Similarity=0.442  Sum_probs=31.0

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++++++|.|.+|++.|.....|..|+++|+++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            677899999999999999999999999999875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.51  E-value=2.5e-08  Score=75.55  Aligned_cols=61  Identities=8%  Similarity=-0.174  Sum_probs=47.5

Q ss_pred             ccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhh-hc---CCCCCCCCCCCCcccccccCCC-C--
Q 047746          114 QNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAA-MH---QGVVPPQRPPDMRGGARFEQGY-F--  185 (247)
Q Consensus       114 ~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~r-iH---tgekPy~~~~~~~cg~~f~~~~-l--  185 (247)
                      +..-+|++||.|.                  .||+.| +...|..|++ +|   ++++||.|   ..||+.|.... |  
T Consensus        10 ~~~~~gekpy~C~------------------~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C---~~Cgk~F~~~~~L~~   68 (102)
T 2ghf_A           10 QQNKKVEGGYECK------------------YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVC---VECNFLTKRYDALSE   68 (102)
T ss_dssp             TTCCCCCSSEECS------------------SCSCEESCHHHHHHHHHHHCSSCCCSCCEEE---TTTTEEESSTHHHHT
T ss_pred             cccCCCCcCcCCC------------------CCCCccCCHHHHHHHHHhhCCCCCCCCCcCC---CCCCcccCCHHHHHH
Confidence            3456899999998                  677899 8999999998 59   67899987   78999998742 2  


Q ss_pred             -------C-CCccccCCC
Q 047746          186 -------A-MPMFMEDDD  195 (247)
Q Consensus       186 -------~-~P~~~~~c~  195 (247)
                             | +||.|..+.
T Consensus        69 H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           69 HNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             HHHHTSTTCCCEEEEECC
T ss_pred             HHHHhcCCCCCeeCCccc
Confidence                   2 677777643

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=1.7e-08  Score=60.30  Aligned_cols=33  Identities=24%  Similarity=0.510  Sum_probs=31.1

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++++++|.|.+|++.|.....|..|+++|++|+
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            678999999999999999999999999999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.51  E-value=9e-09  Score=62.44  Aligned_cols=36  Identities=19%  Similarity=0.435  Sum_probs=32.9

Q ss_pred             CCCCcccccC--cCCcccCCCccccccccccCCCcccc
Q 047746           89 ATVPRVFSCN--YCRRKFYSSQALGGHQNAHKRERTMA  124 (247)
Q Consensus        89 ~tgekpf~C~--~Cgk~F~~~~~L~~H~r~Htgekp~~  124 (247)
                      ++++++|.|.  .|++.|.....|..|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            4678999999  59999999999999999999999873

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.50  E-value=6.2e-08  Score=57.26  Aligned_cols=26  Identities=23%  Similarity=0.263  Sum_probs=23.4

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      .||+.| +...|..|+++|++++||.+
T Consensus         7 ~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            7 ECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             SSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            677999 89999999999999999953

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=1.6e-08  Score=60.38  Aligned_cols=33  Identities=18%  Similarity=0.336  Sum_probs=31.1

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++++++|.|.+|++.|.....|..|+++|+++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            678999999999999999999999999999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=4.6e-08  Score=60.96  Aligned_cols=35  Identities=9%  Similarity=0.013  Sum_probs=29.2

Q ss_pred             ccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746          116 AHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       116 ~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .|+++|||+|.  .              +.|+|+| ++..|+.|+|+|+|+.
T Consensus         3 ~~~gekp~~C~--~--------------~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            3 SGSSGILLKCP--T--------------DGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             CSSCCCCEECS--S--------------SSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCC--C--------------CCCCCccCCHHHHHHHHHhcCCCC
Confidence            47899999997  1              1377999 8999999999999873

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.49  E-value=6e-08  Score=67.12  Aligned_cols=55  Identities=27%  Similarity=0.317  Sum_probs=42.3

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~  182 (247)
                      .+....+..+++|.|.  .              +.|++.| +...|..|+++|++++||.| +...|++.|..
T Consensus         6 ~~~~~~~~~~~~~~C~--~--------------~~C~k~f~~~~~L~~H~~~H~~~~~~~C-~~~~C~k~f~~   61 (72)
T 2epa_A            6 SGPQIDSSRIRSHICS--H--------------PGCGKTYFKSSHLKAHTRTHTGEKPFSC-SWKGCERRFAR   61 (72)
T ss_dssp             CCCCCCCCCCCCEECS--S--------------TTTCCEESSHHHHHHHHHHHSSSCSEEC-CCTTCCCEESS
T ss_pred             CCCCCCccccCceeCC--C--------------CCCccccCCHHHHHHHHHhcCCCCCccC-CCCCCCcccCC
Confidence            3455667888999997  1              1277899 88999999999999999988 21247777765

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=1.7e-08  Score=60.42  Aligned_cols=33  Identities=27%  Similarity=0.521  Sum_probs=31.1

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++++++|+|.+|++.|.....|..|+++|+++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            678999999999999999999999999999875

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.48  E-value=5.1e-08  Score=64.96  Aligned_cols=35  Identities=23%  Similarity=0.205  Sum_probs=29.6

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~  182 (247)
                      .|++.| +...|..|+++|++++||.|   ..|++.|..
T Consensus         7 ~C~~~f~~~~~l~~H~~~h~~~~~~~C---~~C~~~f~~   42 (60)
T 2adr_A            7 VCTRAFARQEHLKRHYRSHTNEKPYPC---GLCNRAFTR   42 (60)
T ss_dssp             TTCCCBSCHHHHHHHHHTTTSSCSEEC---TTTCCEESS
T ss_pred             CCccccCCHHHHHHHHHHhCCCCCccC---CCCCCccCC
Confidence            677999 88999999999999999876   567777764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=5.5e-08  Score=58.51  Aligned_cols=34  Identities=21%  Similarity=0.278  Sum_probs=30.4

Q ss_pred             cccCCCccccccccccCcccccccCCCCCCCCCCCc-Cc-hhHHHHhhhcCCCC
Q 047746          115 NAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RS-LGIKAHAAMHQGVV  166 (247)
Q Consensus       115 r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~-~~L~~H~riHtgek  166 (247)
                      ++|++++||.|.                  .|++.| +. ..|..|+++|+++|
T Consensus         2 ~~h~~~k~~~C~------------------~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCP------------------YCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECS------------------SSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECC------------------CCChhhccCHHHHHHHHHhcCCCC
Confidence            579999999998                  677899 88 89999999999985

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=2.1e-08  Score=60.04  Aligned_cols=33  Identities=27%  Similarity=0.720  Sum_probs=30.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++++++|.|.+|++.|.....|..|+++|+++|
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            567899999999999999999999999999875

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=2.2e-08  Score=60.34  Aligned_cols=33  Identities=27%  Similarity=0.504  Sum_probs=30.9

Q ss_pred             CCCCcccccCcCCcccCCC-ccccccccccCCCc
Q 047746           89 ATVPRVFSCNYCRRKFYSS-QALGGHQNAHKRER  121 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~-~~L~~H~r~Htgek  121 (247)
                      ++++++|.|.+|++.|... ..|..|+++|+++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            6789999999999999999 99999999999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=8.8e-08  Score=57.22  Aligned_cols=34  Identities=12%  Similarity=0.092  Sum_probs=30.1

Q ss_pred             cccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746          115 NAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       115 r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      +.|++++||.|.                  .|++.| +...|..|+++|+++|
T Consensus         2 ~~h~~~k~~~C~------------------~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCH------------------ICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECS------------------SSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECC------------------CCCCccCCHHHHHHHHHHhcCCC
Confidence            468999999998                  677899 8999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1e-07  Score=56.76  Aligned_cols=34  Identities=12%  Similarity=0.059  Sum_probs=30.3

Q ss_pred             cccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746          115 NAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       115 r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .+|++++||.|.                  .|++.| +...|..|+++|+++|
T Consensus         2 ~~h~~~k~~~C~------------------~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCP------------------QCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECS------------------SSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCC------------------CCCcccCCHHHHHHHHHHccCCC
Confidence            468999999998                  677899 8899999999999985

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.1e-07  Score=56.80  Aligned_cols=34  Identities=18%  Similarity=0.123  Sum_probs=30.2

Q ss_pred             cccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746          115 NAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       115 r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      +.|++++||.|.                  .|++.| +...|..|+++|+++|
T Consensus         2 ~~h~~~k~~~C~------------------~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCS------------------LCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECS------------------SSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCC------------------CCCchhCCHHHHHHHHHHhccCC
Confidence            468999999998                  677899 8899999999999875

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.40  E-value=5.5e-08  Score=58.38  Aligned_cols=32  Identities=31%  Similarity=0.471  Sum_probs=30.2

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htge  120 (247)
                      ++++++|+|++|++.|.....|..|+++|+++
T Consensus         6 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            6 STGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            67899999999999999999999999999875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.2e-07  Score=57.39  Aligned_cols=34  Identities=9%  Similarity=-0.014  Sum_probs=30.2

Q ss_pred             ccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHH-hhhcCCC
Q 047746          114 QNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAH-AAMHQGV  165 (247)
Q Consensus       114 ~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H-~riHtge  165 (247)
                      +++|+++|||.|.                  .|++.| +...|..| +++|+++
T Consensus         1 ~~~H~~~k~~~C~------------------~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCS------------------QCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECS------------------SSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECC------------------CCCcccCCHHHHHHHHHHHccCc
Confidence            4689999999998                  677899 89999999 9999986

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=1.8e-07  Score=55.60  Aligned_cols=33  Identities=18%  Similarity=0.226  Sum_probs=29.7

Q ss_pred             ccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746          116 AHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       116 ~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .|++++||.|.                  .|++.| +...|..|+++|++||
T Consensus         3 ~h~~~~~~~C~------------------~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCD------------------MCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCT------------------TTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecC------------------cCCCCcCchHHHHHHHHHhcCCC
Confidence            58899999998                  677999 8999999999999986

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.74  E-value=4.2e-08  Score=55.74  Aligned_cols=30  Identities=30%  Similarity=0.587  Sum_probs=27.9

Q ss_pred             CcccccCcCCcccCCCccccccccccCCCc
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      +++|.|.+|++.|.....|..|+++|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            478999999999999999999999999875

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=6.3e-08  Score=68.87  Aligned_cols=57  Identities=16%  Similarity=0.061  Sum_probs=48.7

Q ss_pred             CccccccccccCCCccccccccccCcccccccCCCCCCCCCCCcCchhHHHHhhhcCCCCCCCCCCCCcccccccCCCC
Q 047746          107 SQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQGYF  185 (247)
Q Consensus       107 ~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~~~l  185 (247)
                      +..|..|+++|.++||+.|.                  .|++.|....|..|+ +|.+++||.|   ..|++.|....|
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~------------------~C~~~~~~~~L~~H~-~~c~~~~~~C---~~C~~~~~~~~l   58 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQ------------------HCDLELSILKLKEHE-DYCGARTELC---GNCGRNVLVKDL   58 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECS------------------SSCCEECHHHHHHHH-HHHHHCEEEC---SSSCCEEETTGG
T ss_pred             chHHHhhCcccCCCcccCCc------------------ccChHhhHHHHHHHH-hHcCCCceEc---ccCCCcCcHHHH
Confidence            45789999999999999998                  567888888999999 9999999988   568888876543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.71  E-value=5e-08  Score=55.27  Aligned_cols=29  Identities=24%  Similarity=0.528  Sum_probs=27.2

Q ss_pred             cccccCcCCcccCCCccccccccccCCCc
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++|.|.+|++.|.....|..|+++|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            57999999999999999999999999875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.35  E-value=5.2e-08  Score=62.86  Aligned_cols=34  Identities=18%  Similarity=0.491  Sum_probs=29.9

Q ss_pred             CCCCcccccCcCCcccCCCcccccccc-ccCCCcc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQN-AHKRERT  122 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r-~Htgekp  122 (247)
                      ++++|+|.|.+|+|.|.....|..|++ +|+++..
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            678999999999999999999999999 9999864

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.35  E-value=1.9e-07  Score=61.35  Aligned_cols=35  Identities=20%  Similarity=0.194  Sum_probs=30.2

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQ  182 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~  182 (247)
                      .|++.| ....|..|+++|++++||.|   ..|++.|..
T Consensus         6 ~C~~~f~~~~~l~~H~~~h~~~~~~~C---~~C~~~f~~   41 (57)
T 1bbo_A            6 ECGIRXKKPSMLKKHIRTHTDVRPYHC---TYCNFSFKT   41 (57)
T ss_dssp             TTCCBCSSHHHHHHHHHHTSSCCCEEC---SSSSCEESS
T ss_pred             CCcCcCCCHHHHHHHHHhcCCCCCccC---CCCCchhcC
Confidence            678999 88999999999999999977   667777765

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.33  E-value=1.4e-07  Score=56.94  Aligned_cols=35  Identities=14%  Similarity=0.279  Sum_probs=29.6

Q ss_pred             ccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746          116 AHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       116 ~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .|++++||.|.                ++.|||.| +...|..|+++|+|+|
T Consensus         2 ~~~~~k~~~C~----------------~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICH----------------IQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECC----------------STTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCC----------------CCCCCCccCCHHHHHHHHHhcCCCC
Confidence            48899999997                11378999 8999999999999985

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.33  E-value=1.5e-07  Score=60.64  Aligned_cols=35  Identities=20%  Similarity=0.309  Sum_probs=27.9

Q ss_pred             ccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhh-hcCCCCCC
Q 047746          116 AHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAA-MHQGVVPP  168 (247)
Q Consensus       116 ~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~r-iHtgekPy  168 (247)
                      +|+++|||.|.                  .|+|.| +...|..|++ +|+++.+-
T Consensus         1 ~Ht~~kp~~C~------------------~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACD------------------ICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECT------------------TTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECC------------------CcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            58999999998                  677999 8999999999 99998763

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.33  E-value=4e-08  Score=59.49  Aligned_cols=33  Identities=21%  Similarity=0.403  Sum_probs=30.4

Q ss_pred             CCCCcccccCc--CCcccCCCccccccccccCCCc
Q 047746           89 ATVPRVFSCNY--CRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        89 ~tgekpf~C~~--Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++++++|.|.+  |++.|.....|..|+++|+++|
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            57799999995  9999999999999999999975

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=5.7e-08  Score=54.95  Aligned_cols=30  Identities=23%  Similarity=0.652  Sum_probs=28.0

Q ss_pred             CcccccCcCCcccCCCccccccccccCCCc
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      +++|.|.+|++.|.....|..|+++|+++|
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=9.8e-08  Score=66.76  Aligned_cols=34  Identities=18%  Similarity=0.415  Sum_probs=31.7

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERT  122 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp  122 (247)
                      +.++|||+|.+|+|.|.....|..|+++|++++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            6779999999999999999999999999999753

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.31  E-value=8.1e-08  Score=54.16  Aligned_cols=29  Identities=28%  Similarity=0.543  Sum_probs=27.3

Q ss_pred             cccccCcCCcccCCCccccccccccCCCc
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      |+|.|.+|++.|.....|..|+++|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999875

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.29  E-value=1.5e-07  Score=54.58  Aligned_cols=30  Identities=27%  Similarity=0.629  Sum_probs=28.0

Q ss_pred             CcccccC--cCCcccCCCccccccccccCCCc
Q 047746           92 PRVFSCN--YCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        92 ekpf~C~--~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      +++|.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789999  89999999999999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=3.1e-07  Score=54.74  Aligned_cols=33  Identities=12%  Similarity=0.190  Sum_probs=29.3

Q ss_pred             ccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746          116 AHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       116 ~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .|++++||.|.                  .|++.| +...|..|+++|+++|
T Consensus         3 ~~~~~k~~~C~------------------~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCE------------------YCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECT------------------TTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECC------------------CCCceeCCHHHHHHHHHHhCCCC
Confidence            57889999998                  677899 8999999999999985

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=8.4e-08  Score=58.02  Aligned_cols=32  Identities=16%  Similarity=0.370  Sum_probs=30.0

Q ss_pred             CCCCcccccCcCCcccCCCcccccc-ccccCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGH-QNAHKRE  120 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H-~r~Htge  120 (247)
                      +++++||+|.+|++.|.....|..| +++|+++
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            6789999999999999999999999 9999875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.24  E-value=1.2e-07  Score=68.79  Aligned_cols=32  Identities=19%  Similarity=0.242  Sum_probs=31.3

Q ss_pred             cccCcCCcccCCCccccccccccCCCcccccc
Q 047746           95 FSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        95 f~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      |.|.+|++.|.....|..|+++|++++||.|.
T Consensus        63 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             TTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            99999999999999999999999999999996

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.24  E-value=1.1e-07  Score=55.74  Aligned_cols=24  Identities=25%  Similarity=0.133  Sum_probs=22.1

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVVPP  168 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgekPy  168 (247)
                      .||+.| +...|..|+++|++++||
T Consensus         7 ~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            7 ACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             SSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCcccCCHHHHHHHHHHHccCCCC
Confidence            677999 899999999999999997

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.24  E-value=1.1e-07  Score=53.22  Aligned_cols=29  Identities=24%  Similarity=0.490  Sum_probs=27.2

Q ss_pred             cccccCcCCcccCCCccccccccccCCCc
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      |+|.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.24  E-value=1.1e-07  Score=53.52  Aligned_cols=29  Identities=34%  Similarity=0.720  Sum_probs=27.1

Q ss_pred             cccccCcCCcccCCCccccccccccCCCc
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++|.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.23  E-value=1.8e-06  Score=60.23  Aligned_cols=37  Identities=16%  Similarity=0.224  Sum_probs=31.7

Q ss_pred             ccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCC
Q 047746          114 QNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPP  168 (247)
Q Consensus       114 ~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy  168 (247)
                      ...|+++|||.|.                  .|+|.| +...|..|+|+|++++..
T Consensus         5 ~~~~~~ekpy~C~------------------~CgK~F~~~s~L~~H~r~Htg~~~~   42 (66)
T 2epp_A            5 SSGLREAGILPCG------------------LCGKVFTDANRLRQHEAQHGVTSLQ   42 (66)
T ss_dssp             SCSCCCCCCCCCT------------------TTCCCCSCHHHHHHHHHHHTTTSCC
T ss_pred             CCCCCCccCcCCC------------------CCCCccCCHHHHHhhhhhhCCCccc
Confidence            3458899999998                  677999 899999999999998653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.23  E-value=1.5e-07  Score=53.18  Aligned_cols=30  Identities=20%  Similarity=0.523  Sum_probs=27.8

Q ss_pred             cccccCcCCcccCCCccccccccccCCCcc
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRERT  122 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgekp  122 (247)
                      ++|.|.+|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            579999999999999999999999998864

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.22  E-value=1.1e-07  Score=58.68  Aligned_cols=31  Identities=29%  Similarity=0.384  Sum_probs=28.6

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      ..++|||+|++|+|.|.+.++|..|+       ||.|.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~   33 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCS   33 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTST
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECc
Confidence            56899999999999999999999998       88886

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.22  E-value=1.9e-07  Score=53.78  Aligned_cols=29  Identities=38%  Similarity=0.850  Sum_probs=27.1

Q ss_pred             cccccC--cCCcccCCCccccccccccCCCc
Q 047746           93 RVFSCN--YCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        93 kpf~C~--~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      +||.|.  +|++.|.....|..|+++|+++|
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999999975

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.21  E-value=2.8e-07  Score=52.26  Aligned_cols=29  Identities=28%  Similarity=0.603  Sum_probs=27.0

Q ss_pred             cccccCcCCcccCCCcccccc-ccccCCCc
Q 047746           93 RVFSCNYCRRKFYSSQALGGH-QNAHKRER  121 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H-~r~Htgek  121 (247)
                      ++|.|.+|++.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            579999999999999999999 89999875

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=8.7e-08  Score=53.83  Aligned_cols=29  Identities=28%  Similarity=0.550  Sum_probs=27.2

Q ss_pred             cccccCcCCcccCCCccccccccccCCCc
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++|.|.+|++.|.....|..|+++|+++|
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            57999999999999999999999999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.16  E-value=2.2e-07  Score=52.04  Aligned_cols=28  Identities=25%  Similarity=0.593  Sum_probs=26.1

Q ss_pred             CcccccCcCCcccCCCccccccccccCC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKR  119 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htg  119 (247)
                      +++|.|.+|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999999975

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.15  E-value=2.1e-07  Score=59.55  Aligned_cols=33  Identities=21%  Similarity=0.478  Sum_probs=30.5

Q ss_pred             CCCCcccccC--cCCcccCCCccccccccccCCCc
Q 047746           89 ATVPRVFSCN--YCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        89 ~tgekpf~C~--~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++++++|.|.  .|++.|.....|..|+++|+++|
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            6789999996  69999999999999999999985

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.12  E-value=4e-07  Score=50.40  Aligned_cols=27  Identities=37%  Similarity=0.806  Sum_probs=24.3

Q ss_pred             ccccCcCCcccCCCccccccccccCCC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htge  120 (247)
                      +|+|.+|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999999875

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.11  E-value=2.6e-07  Score=51.46  Aligned_cols=27  Identities=26%  Similarity=0.535  Sum_probs=25.2

Q ss_pred             CcccccCcCCcccCCCccccccccccC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHK  118 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Ht  118 (247)
                      +++|.|.+|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478999999999999999999999885

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.10  E-value=2.5e-07  Score=51.82  Aligned_cols=27  Identities=22%  Similarity=0.485  Sum_probs=25.2

Q ss_pred             CcccccCcCCcccCCCccccccccccC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHK  118 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Ht  118 (247)
                      ++||+|.+|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            478999999999999999999999985

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.37  E-value=4.3e-07  Score=50.09  Aligned_cols=26  Identities=27%  Similarity=0.703  Sum_probs=24.3

Q ss_pred             cccccCcCCcccCCCccccccccccC
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHK  118 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Ht  118 (247)
                      |||.|.+|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999884

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=1.2e-06  Score=59.72  Aligned_cols=44  Identities=16%  Similarity=0.043  Sum_probs=35.3

Q ss_pred             cCCCccccccccccCcccccccCCCCCCCCCCCcCchhHHHHhhhcCCCCCCCCCCCC-cccccccC
Q 047746          117 HKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRPPDM-RGGARFEQ  182 (247)
Q Consensus       117 Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F~~~~L~~H~riHtgekPy~~~~~~-~cg~~f~~  182 (247)
                      +.++|||.|.                  .|++.|....|..|+++ ++++||.|   . .||+.|..
T Consensus         5 ~C~~~~~~C~------------------~C~k~f~~~~L~~H~~~-~~~~p~~C---~~~C~k~f~~   49 (66)
T 2eod_A            5 SSGKRTQPCT------------------YCTKEFVFDTIQSHQYQ-CPRLPVAC---PNQCGVGTVA   49 (66)
T ss_dssp             CCCCCEEECS------------------SSCCEEEHHHHHHHHHH-CSSSEEEC---TTCCSCCEEE
T ss_pred             cCCCCCeecc------------------ccCCccCHHHHHHHHHH-cCCcCccC---CcccCccccc
Confidence            4678899998                  56788886689999999 99999976   5 67776654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.01  E-value=3.9e-06  Score=48.31  Aligned_cols=22  Identities=27%  Similarity=0.273  Sum_probs=19.8

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .|++.| +...|..|+++|++++
T Consensus        10 ~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A           10 GCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             TCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCccCCHHHHHHHHHHccCCC
Confidence            578999 8999999999999985

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.97  E-value=2.8e-06  Score=47.66  Aligned_cols=22  Identities=18%  Similarity=0.209  Sum_probs=19.5

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .||+.| ....|..|+++|+++|
T Consensus         8 ~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            8 YCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             TTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CCCcccCCHHHHHHHHHHhccCC
Confidence            677899 7899999999999875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.95  E-value=4.6e-06  Score=47.72  Aligned_cols=22  Identities=32%  Similarity=0.471  Sum_probs=19.9

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .||+.| +...|..|+++|+|+|
T Consensus         9 ~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            9 YCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             TCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCCcccCCHhHHHHHHHHhcCCC
Confidence            578999 8999999999999985

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.90  E-value=4.3e-06  Score=46.73  Aligned_cols=22  Identities=23%  Similarity=0.237  Sum_probs=19.7

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .||+.| +...|..|+++|+++|
T Consensus         7 ~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            7 ECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             SSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCCchhCCHHHHHHHHHHhcCCC
Confidence            677899 8999999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.89  E-value=6e-06  Score=46.00  Aligned_cols=22  Identities=27%  Similarity=0.294  Sum_probs=19.7

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .|++.| +...|..|+++|+++|
T Consensus         7 ~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            7 VCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             TTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCCcccCCHHHHHHHHHHhcCCC
Confidence            677999 8899999999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.87  E-value=7.3e-06  Score=45.81  Aligned_cols=23  Identities=13%  Similarity=0.013  Sum_probs=20.5

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      .|++.| ....|..|+++|++++|
T Consensus         7 ~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            7 YCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             SSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCCCccCCHHHHHHHHHHHccCCC
Confidence            677999 88999999999999875

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.87  E-value=5.7e-06  Score=45.91  Aligned_cols=22  Identities=23%  Similarity=0.211  Sum_probs=19.7

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .|++.| +...|..|+++|++++
T Consensus         7 ~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            7 HCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             SCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcccCCHHHHHHHHHHhccCC
Confidence            677999 8999999999999875

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.09  E-value=1.9e-06  Score=48.55  Aligned_cols=22  Identities=18%  Similarity=0.294  Sum_probs=19.4

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .||+.| +...|..|+++|+++|
T Consensus         8 ~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            8 HCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            677899 8899999999999875

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.82  E-value=4.9e-06  Score=46.30  Aligned_cols=22  Identities=32%  Similarity=0.436  Sum_probs=19.7

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .|++.| ....|..|+++|+++|
T Consensus         7 ~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            7 ECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             TTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCCCccCChhHHHHHHHHhcCCC
Confidence            677899 7899999999999985

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.01  E-value=2.7e-06  Score=47.75  Aligned_cols=22  Identities=32%  Similarity=0.533  Sum_probs=19.5

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .||+.| +...|..|+++|+++|
T Consensus         7 ~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            7 MCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            677899 8899999999999875

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.75  E-value=5e-06  Score=51.03  Aligned_cols=29  Identities=17%  Similarity=0.076  Sum_probs=25.0

Q ss_pred             cCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          117 HKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       117 Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.+||||.|.                  .|||+| ++++|.+|+       ||.|
T Consensus         3 ~~gekp~~C~------------------~CgK~F~~~s~L~~H~-------py~C   32 (36)
T 1fv5_A            3 LLKPARFMCL------------------PCGIAFSSPSTLEAHQ-------AYYC   32 (36)
T ss_dssp             SSSCCCCEET------------------TTTEECSCHHHHHHHH-------HHTS
T ss_pred             CCCccCeECC------------------CCCCccCCHhHccCcC-------CeEC
Confidence            6789999998                  667999 899999998       6766

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.73  E-value=2.8e-06  Score=47.40  Aligned_cols=27  Identities=30%  Similarity=0.684  Sum_probs=25.1

Q ss_pred             cccccC--cCCcccCCCccccccccccCC
Q 047746           93 RVFSCN--YCRRKFYSSQALGGHQNAHKR  119 (247)
Q Consensus        93 kpf~C~--~Cgk~F~~~~~L~~H~r~Htg  119 (247)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            579999  999999999999999999975

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.71  E-value=1.7e-05  Score=44.53  Aligned_cols=22  Identities=32%  Similarity=0.437  Sum_probs=19.4

Q ss_pred             CCCCCc-CchhHHHH-hhhcCCCC
Q 047746          145 LHGSAF-RSLGIKAH-AAMHQGVV  166 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H-~riHtgek  166 (247)
                      .|++.| +...|..| +++|++++
T Consensus         7 ~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            7 LCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             TTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             ccCcccCChHHHHHHHHHHccCCC
Confidence            677899 88999999 79999985

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.71  E-value=1.1e-05  Score=44.80  Aligned_cols=20  Identities=25%  Similarity=0.506  Sum_probs=17.7

Q ss_pred             CCCCCc-CchhHHHHhhhcCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtg  164 (247)
                      .|++.| +...|..|+++|+|
T Consensus         8 ~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            8 VCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             SSCCEESCHHHHHHHHTTSCC
T ss_pred             CCCcccCCHHHHHHHHHhcCC
Confidence            677899 88999999999985

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.66  E-value=1.5e-05  Score=43.94  Aligned_cols=19  Identities=16%  Similarity=0.072  Sum_probs=16.9

Q ss_pred             CCCCCc-CchhHHHHhhhcC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHt  163 (247)
                      .||+.| +...|..|+++|+
T Consensus         8 ~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            8 LCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             SSSCEESSHHHHHHHHHHCC
T ss_pred             CcChhhCCHHHHHHHHHHcc
Confidence            677899 8999999999995

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.63  E-value=2.5e-05  Score=42.73  Aligned_cols=21  Identities=19%  Similarity=0.413  Sum_probs=18.3

Q ss_pred             CCCCCc-CchhHHHHhhhcCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtge  165 (247)
                      .|++.| +...|..|+++|+++
T Consensus         6 ~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            6 LCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             SSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CCCCcCCCHHHHHHHHHHcCCC
Confidence            678999 889999999999975

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.62  E-value=1.3e-05  Score=44.48  Aligned_cols=26  Identities=15%  Similarity=0.107  Sum_probs=22.3

Q ss_pred             CccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcC
Q 047746          120 ERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus       120 ekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHt  163 (247)
                      ++||.|.                  .||+.| +...|..|+++|+
T Consensus         1 ~k~~~C~------------------~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCP------------------LCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEET------------------TTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCC------------------CCCcccCCHHHHHHHHHhcC
Confidence            5789888                  677899 8899999999985

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.45  E-value=2.9e-05  Score=42.30  Aligned_cols=19  Identities=26%  Similarity=0.396  Sum_probs=16.5

Q ss_pred             CCCCCc-CchhHHHHhhhcC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHt  163 (247)
                      .||+.| +...|..|+++|+
T Consensus         7 ~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            7 RCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            677899 8899999999985

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.13  E-value=0.00016  Score=39.86  Aligned_cols=20  Identities=25%  Similarity=0.496  Sum_probs=17.8

Q ss_pred             CCCCCc-CchhHHHHhhhcCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtg  164 (247)
                      .|++.| +...|..|+++|++
T Consensus         9 ~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            9 NCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             TTCEEESSHHHHHHHHGGGTC
T ss_pred             cCcCccCCHHHHHHHHHHhCC
Confidence            678999 88999999999985

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.13  E-value=0.0014  Score=44.87  Aligned_cols=52  Identities=17%  Similarity=0.192  Sum_probs=40.5

Q ss_pred             cccCc--CCcccCCCccccccc-cccCCCc------cccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhc
Q 047746           95 FSCNY--CRRKFYSSQALGGHQ-NAHKRER------TMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMH  162 (247)
Q Consensus        95 f~C~~--Cgk~F~~~~~L~~H~-r~Htgek------p~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riH  162 (247)
                      |.|..  |++.|.....|..|+ +.|.+.+      +|.|.+..|+                +.+ ....|..|+|+.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~----------------~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCD----------------FLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCC----------------CEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCc----------------CCCCChHHHHhhcccc
Confidence            45654  999999999999998 5798776      7999877676                333 345799999864

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.76  E-value=0.001  Score=51.93  Aligned_cols=28  Identities=25%  Similarity=0.354  Sum_probs=25.9

Q ss_pred             CCCCcccccCcCCcccCCCccccccccc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNA  116 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~  116 (247)
                      ++|+++|.|..|+|.|.+...|..|+++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            6789999999999999999999999875

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=93.68  E-value=0.015  Score=45.20  Aligned_cols=39  Identities=18%  Similarity=0.106  Sum_probs=30.2

Q ss_pred             cccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhh--cC------CCCCCC
Q 047746          113 HQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAM--HQ------GVVPPQ  169 (247)
Q Consensus       113 H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~ri--Ht------gekPy~  169 (247)
                      +..-|+|++||.|.                  .|+|.| +...|..|+|+  |.      .++||.
T Consensus        41 ~ded~tGekpfyC~------------------~C~K~F~~~~~L~~H~rsK~HKrrvk~l~~~p~T   88 (124)
T 1zr9_A           41 FDPDLPGGGLHRCL------------------ACARYFIDSTNLKTHFRSKDHKKRLKQLSVEPYS   88 (124)
T ss_dssp             SCSSSGGGGCSEET------------------TTTEECSSHHHHHHHTTCHHHHHHHHHHTSCSSC
T ss_pred             ccccCCCCcceEcc------------------cCcchhCCHHHHHHHHhhhhhhHHHHHhccCCCc
Confidence            45679999999998                  667889 88899999875  43      356764

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.70  E-value=0.083  Score=34.03  Aligned_cols=23  Identities=30%  Similarity=0.522  Sum_probs=21.6

Q ss_pred             cccccCcCCcccCCCcccccccc
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQN  115 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r  115 (247)
                      .+|.|+.|++.|.....|++|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            56999999999999999999987

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=89.22  E-value=0.11  Score=41.67  Aligned_cols=57  Identities=12%  Similarity=0.152  Sum_probs=33.9

Q ss_pred             ccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCcCchhHHHHhhhcCCCCCCC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQ  169 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F~~~~L~~H~riHtgekPy~  169 (247)
                      +..|..|+..+ ....|..|....-..|+..|.                  +|+..|....|..|..+++|+.+|.
T Consensus       110 ~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~------------------~C~~~~~~~~l~~H~~~~~~~~~~~  166 (170)
T 3hcs_A          110 LMDCPQCQRPF-QKFHINIHILKDCPRRQVSCD------------------NCAASMAFEDKEIHDQNCPLALEHH  166 (170)
T ss_dssp             EEECTTTCCEE-EGGGHHHHHHHTCTTCEEECT------------------TTCCEEEGGGHHHHHTTCCC-----
T ss_pred             eeECCCCChHH-HHHHHHHHhhhhCCCCCeECC------------------CCCCccCHHHHHhHHHhCcChhhhh
Confidence            44566666655 344455565544444555554                  5667777788999999999998874

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=84.00  E-value=0.19  Score=36.51  Aligned_cols=32  Identities=22%  Similarity=0.321  Sum_probs=26.8

Q ss_pred             CcccccCcCCcccCCCccccccccccCCCcccccc
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      +.-..|-+|||.|.   .|.+|.+.|+|..|..++
T Consensus        19 ~d~iiClecGK~fK---~LkRHL~~~hgltpeeYR   50 (87)
T 2jsp_A           19 DDHIVCLECGGSFK---SLKRHLTTHHSMTPEEYR   50 (87)
T ss_dssp             SSCEECTBTCCEES---BHHHHHHHTTCSCHHHHH
T ss_pred             CCceEecccchhhH---HHHHHHHHccCCCHHHHH
Confidence            34468999999998   488999998899887776

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=83.77  E-value=0.26  Score=38.01  Aligned_cols=68  Identities=13%  Similarity=0.167  Sum_probs=41.2

Q ss_pred             CcccccCcCCcccCCCccccccc--cccCCC-ccccccccccCc--cccccc-----------CCCCCCCCCCCc-Cchh
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQ--NAHKRE-RTMAKRAMRMGI--FSDRYT-----------SLASLPLHGSAF-RSLG  154 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~--r~Htge-kp~~C~~~~Cg~--~~k~F~-----------~~s~L~~hgk~F-~~~~  154 (247)
                      .+++.|.+|...|.+...+..|.  +.|... +.+.+.. ....  ..+.+.           ....+..|.+.| ....
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~  108 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAIN-QGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVV  108 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHT-TCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhccc-CcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHH
Confidence            36789999999999999999997  456542 3333310 0000  011111           011245778999 7788


Q ss_pred             HHHHhh
Q 047746          155 IKAHAA  160 (247)
Q Consensus       155 L~~H~r  160 (247)
                      |..|..
T Consensus       109 ~~~H~~  114 (127)
T 1zu1_A          109 AESHYI  114 (127)
T ss_dssp             HHHHHT
T ss_pred             HHHHHC
Confidence            888864

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=80.95  E-value=1.4  Score=33.08  Aligned_cols=36  Identities=17%  Similarity=0.198  Sum_probs=27.8

Q ss_pred             CCCCCCCCCcccccccCCCCCCCccccCCCCccccCCCce
Q 047746          166 VPPQRPPDMRGGARFEQGYFAMPMFMEDDDIDLFWPGSFR  205 (247)
Q Consensus       166 kPy~~~~~~~cg~~f~~~~l~~P~~~~~c~~~f~~~~s~~  205 (247)
                      .||.|   ..||..| ...+++|-.|..|.....-+-.|.
T Consensus        66 ~p~~C---~~CG~~F-~~~~~kPsrCP~CkSe~Ie~P~F~  101 (105)
T 2gmg_A           66 KPAQC---RKCGFVF-KAEINIPSRCPKCKSEWIEEPRFK  101 (105)
T ss_dssp             CCCBB---TTTCCBC-CCCSSCCSSCSSSCCCCBCCCCEE
T ss_pred             ECcCh---hhCcCee-cccCCCCCCCcCCCCCccCCccee
Confidence            67877   9999999 445789999999988766554443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	247
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	6e-14

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 62.0 bits (151), Expect = 6e-14
 Identities = 17/34 (50%), Positives = 27/34 (79%)

Query: 92  PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK 125
           PR ++C++C+R+F S+QALGGH N H+R+R   +
Sbjct: 3   PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	247
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.57
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.31
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.22
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.15
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.11
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.11
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.07
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.04
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.03
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.03
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.02
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.01
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.99
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.99
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.91
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.9
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.88
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.87
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.83
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.82
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.79
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.77
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.77
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.76
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.76
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.75
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.74
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.71
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.69
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.64
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.64
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.6
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.6
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.43
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.43
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.4
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.4
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.37
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.35
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.3
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.29
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.11
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.11
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.97
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.89
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.74
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.58
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.56
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.48
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.42
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.34
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.31
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.27
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.16
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.06
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.97
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.88
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.81
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.77
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.57
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.54
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.53
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.36
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.29
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.25
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.25
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.13
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	95.96
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.9
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.88
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.87
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.87
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.66
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.33
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.62
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	94.22
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.73
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	93.42
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.31
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	92.99
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	92.68
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.41
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	92.13
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.7
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	89.94
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	88.52
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.51
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	87.85
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	87.53
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.37
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	84.73
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	84.66
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	83.31
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	82.5
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	81.37

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.1e-16  Score=106.45  Aligned_cols=52  Identities=19%  Similarity=0.432  Sum_probs=49.1

Q ss_pred             CcccccCcCCcccCCCccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhc
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMH  162 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riH  162 (247)
                      ||+|+|+ |||.|....+|..|+++|+|+|||.|.                  .||++| +...|..|+|+|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~------------------~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCG------------------VCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECT------------------TTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCC------------------CcCCEecCHHHHHHHHhcC
Confidence            6899994 999999999999999999999999998                  677999 899999999998

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=4e-13  Score=82.96  Aligned_cols=37  Identities=22%  Similarity=0.341  Sum_probs=34.3

Q ss_pred             cccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746          111 GGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       111 ~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      .+|+++|++||||.|.                  .|||+| +.++|..|+|+|+||
T Consensus         1 ~rH~~~Ht~ekpy~C~------------------~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           1 GRSEWQQRERRRYKCD------------------ECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCCSCCCCSCSSBCS------------------SSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CccCcccCCCCCEecC------------------CCCceeeCHHHHHHhCccCCCC
Confidence            4799999999999998                  677999 899999999999997

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=5e-13  Score=82.81  Aligned_cols=36  Identities=28%  Similarity=0.566  Sum_probs=33.6

Q ss_pred             CCcccccCcCCcccCCCcccccccc-ccCCCcccccc
Q 047746           91 VPRVFSCNYCRRKFYSSQALGGHQN-AHKRERTMAKR  126 (247)
Q Consensus        91 gekpf~C~~Cgk~F~~~~~L~~H~r-~Htgekp~~C~  126 (247)
                      .+|||+|.+|||.|....+|..|++ +|+|||||+|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            3799999999999999999999975 89999999996

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=5.3e-12  Score=75.27  Aligned_cols=32  Identities=31%  Similarity=0.386  Sum_probs=29.7

Q ss_pred             ccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746          116 AHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       116 ~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      +|+|||||+|.                  .|||+| +.+.|..|+|+|+||
T Consensus         1 IHTgekpy~C~------------------~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCV------------------ECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECS------------------SSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCC------------------CCCCEeCchHHhHhhccccCCC
Confidence            69999999998                  677999 899999999999997

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=3.2e-12  Score=76.28  Aligned_cols=32  Identities=28%  Similarity=0.487  Sum_probs=31.1

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htge  120 (247)
                      ++++|||+|.+|||.|...+.|..|+++|+||
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            78999999999999999999999999999997

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=1.5e-11  Score=75.24  Aligned_cols=35  Identities=17%  Similarity=0.128  Sum_probs=32.1

Q ss_pred             ccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746          112 GHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus       112 ~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      +|.|+|+|||||+|.                  .|+|+| ++++|..|+|+|.+
T Consensus         1 gh~R~HTgeKPy~C~------------------~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           1 GSTRGSTGIKPFQCP------------------DCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CCSSTTCCSSSBCCT------------------TTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCCccCCccCeEeC------------------CCCCEecCHHHHHHHHhcCcC
Confidence            699999999999998                  677999 89999999999975

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.4e-11  Score=75.05  Aligned_cols=34  Identities=18%  Similarity=0.266  Sum_probs=30.5

Q ss_pred             CCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhh-hcCCCCCCCC
Q 047746          119 RERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAA-MHQGVVPPQR  170 (247)
Q Consensus       119 gekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~r-iHtgekPy~~  170 (247)
                      -+|||+|.                  .|||+| ++++|+.|+| +|+|||||+|
T Consensus         2 ~~Kpy~C~------------------~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           2 VGKPYICQ------------------SCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SSCCEECS------------------SSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCCccCC------------------CCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            47999998                  677999 8999999975 8999999998

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.04  E-value=2.8e-11  Score=77.86  Aligned_cols=43  Identities=16%  Similarity=0.183  Sum_probs=35.9

Q ss_pred             CccccccccccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746          107 SQALGGHQNAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       107 ~~~L~~H~r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      ...|..|++ |++||||.|..                +.|+|.| ++++|+.|+|+|+|||
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~----------------~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLF----------------PGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCC----------------TTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCc----------------CCCCccccCchHHHhhcccccCCC
Confidence            345677775 99999999982                2377999 8999999999999997

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1.6e-11  Score=75.53  Aligned_cols=33  Identities=27%  Similarity=0.568  Sum_probs=31.6

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCCC
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htge  120 (247)
                      .++++|||+|++|||.|...++|..|+++|+||
T Consensus         6 ~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           6 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            378999999999999999999999999999997

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=3.9e-11  Score=72.94  Aligned_cols=33  Identities=15%  Similarity=0.136  Sum_probs=30.3

Q ss_pred             cccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746          115 NAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       115 r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      |+|+|||||+|.                  .|||+| +++.|+.|+|+|+++
T Consensus         1 R~HTgekPy~C~------------------~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACS------------------HCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECS------------------SSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECC------------------CCCCCcCCHhHHHHhCcccCCC
Confidence            689999999999                  677999 899999999999976

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.02  E-value=1.5e-11  Score=71.26  Aligned_cols=29  Identities=34%  Similarity=0.720  Sum_probs=28.1

Q ss_pred             cccccCcCCcccCCCccccccccccCCCc
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      |||.|++|+|.|...+.|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999997

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.01  E-value=2e-11  Score=73.69  Aligned_cols=33  Identities=21%  Similarity=0.409  Sum_probs=31.1

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++|||||+|.+|+|.|..+.+|..|+++|+.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            789999999999999999999999999999763

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=4.8e-11  Score=78.42  Aligned_cols=35  Identities=26%  Similarity=0.372  Sum_probs=30.3

Q ss_pred             CCCCc-CchhHHHHhhhcCCCCCCCCCCCCcccccccCC
Q 047746          146 HGSAF-RSLGIKAHAAMHQGVVPPQRPPDMRGGARFEQG  183 (247)
Q Consensus       146 hgk~F-~~~~L~~H~riHtgekPy~~~~~~~cg~~f~~~  183 (247)
                      |||.| +...|..|+++|+|+|||.|   ..||+.|.+.
T Consensus         8 Cgk~F~~~~~l~~H~~~Ht~ekpy~C---~~C~k~F~~~   43 (53)
T d2csha1           8 CGKSFTHKSQRDRHMSMHLGLRPYGC---GVCGKKFKMK   43 (53)
T ss_dssp             TSCEESSHHHHHHHHHHHSCCCSEEC---TTTSCEESSS
T ss_pred             CCCeECCHHHhHHHhhccccccCCcC---CCcCCEecCH
Confidence            56889 89999999999999999987   7788887753

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=2.4e-11  Score=70.28  Aligned_cols=29  Identities=28%  Similarity=0.717  Sum_probs=28.1

Q ss_pred             cccccCcCCcccCCCccccccccccCCCc
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      |||.|++|+|.|.+++.|.+|+|+|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999996

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.91  E-value=2e-10  Score=69.14  Aligned_cols=32  Identities=22%  Similarity=0.294  Sum_probs=29.0

Q ss_pred             cCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCCC
Q 047746          117 HKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       117 Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      |+|||||.|.                  .|+|.| ++.+|++|+|+|+.+.
T Consensus         2 ~TGekPy~C~------------------~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCR------------------ICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECS------------------SSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCC------------------CCCCcccChHHHHHHccccCCcC
Confidence            8999999998                  678999 8999999999999763

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=3.5e-11  Score=68.99  Aligned_cols=28  Identities=32%  Similarity=0.636  Sum_probs=27.1

Q ss_pred             CcccccCcCCcccCCCccccccccccCC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKR  119 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htg  119 (247)
                      ||||+|.+|+|.|..+.+|..|+|+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6999999999999999999999999987

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=1e-10  Score=71.05  Aligned_cols=33  Identities=21%  Similarity=0.388  Sum_probs=31.3

Q ss_pred             CCCCcccccCcCCcccCCCccccccccccCCCc
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++|||||+|.+|+|+|.....|..|+++|+++.
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            899999999999999999999999999998763

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.87  E-value=3.8e-10  Score=65.15  Aligned_cols=22  Identities=27%  Similarity=0.294  Sum_probs=20.6

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .|||+| +++.|++|+|+|||||
T Consensus         7 ~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           7 VCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             TTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CCCCCCCCchHcccccCcccCCC
Confidence            778999 8999999999999997

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=8.9e-11  Score=71.23  Aligned_cols=32  Identities=28%  Similarity=0.498  Sum_probs=30.8

Q ss_pred             cccCc--CCcccCCCccccccccccCCCcccccc
Q 047746           95 FSCNY--CRRKFYSSQALGGHQNAHKRERTMAKR  126 (247)
Q Consensus        95 f~C~~--Cgk~F~~~~~L~~H~r~Htgekp~~C~  126 (247)
                      |.|.+  |+|.|.....|++|+++|+|||||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            88987  999999999999999999999999996

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=8.1e-10  Score=63.67  Aligned_cols=22  Identities=27%  Similarity=0.225  Sum_probs=20.5

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      .|||+| ++++|.+|+|+|+|||
T Consensus         7 ~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           7 ECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             TTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             cCCCeecchHHhhhhcCccCCcC
Confidence            678999 8999999999999997

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=7.1e-10  Score=67.13  Aligned_cols=27  Identities=22%  Similarity=0.290  Sum_probs=25.0

Q ss_pred             CCCCCCc-CchhHHHHhhhcCCCCCCCC
Q 047746          144 PLHGSAF-RSLGIKAHAAMHQGVVPPQR  170 (247)
Q Consensus       144 ~~hgk~F-~~~~L~~H~riHtgekPy~~  170 (247)
                      +.|||+| ++..|++|+|+|+|||||+|
T Consensus         7 ~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           7 PACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             TTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             CCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            4588999 89999999999999999998

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.4e-10  Score=65.03  Aligned_cols=26  Identities=27%  Similarity=0.588  Sum_probs=25.0

Q ss_pred             cccccCcCCcccCCCccccccccccC
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHK  118 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Ht  118 (247)
                      |||+|++|||.|..++.|..|+|+||
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999996

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.5e-09  Score=63.51  Aligned_cols=23  Identities=30%  Similarity=0.456  Sum_probs=20.8

Q ss_pred             CCCCCCc-CchhHHHHhhhcCCCC
Q 047746          144 PLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       144 ~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      +.|||+| +.++|++|+|+|+|||
T Consensus         8 ~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           8 SYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             TTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCCCcCcCChhHhhhhcCcccccC
Confidence            4678999 8999999999999997

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.1e-09  Score=66.29  Aligned_cols=32  Identities=22%  Similarity=0.279  Sum_probs=27.5

Q ss_pred             cccCCCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhh-cCC
Q 047746          115 NAHKRERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAM-HQG  164 (247)
Q Consensus       115 r~Htgekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~ri-Htg  164 (247)
                      |+|+|||||.|.                  .|+|.| ++.+|+.|++. |+.
T Consensus         1 R~HTgekP~~C~------------------~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECY------------------ICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECT------------------TTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCC------------------CCcccccchHHHHHHcccccCC
Confidence            689999999998                  677999 89999999864 544

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.76  E-value=7.2e-10  Score=63.35  Aligned_cols=27  Identities=26%  Similarity=0.420  Sum_probs=24.8

Q ss_pred             CccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746          120 ERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus       120 ekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      ||||+|.                  .|+|+| ++++|..|+|+|||
T Consensus         1 EKPy~C~------------------~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCR------------------ICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECT------------------TTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCC------------------CCcCEecccccccccCCCccC
Confidence            7999998                  677999 89999999999997

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.75  E-value=6.6e-10  Score=67.73  Aligned_cols=32  Identities=31%  Similarity=0.496  Sum_probs=30.2

Q ss_pred             CCCCCcccccCcCCcccCCCccccccccccCC
Q 047746           88 AATVPRVFSCNYCRRKFYSSQALGGHQNAHKR  119 (247)
Q Consensus        88 ~~tgekpf~C~~Cgk~F~~~~~L~~H~r~Htg  119 (247)
                      .++|||||+|.+|+|.|...++|..|+++|.+
T Consensus         5 ~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             ccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            48999999999999999999999999999975

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.74  E-value=4.2e-10  Score=72.24  Aligned_cols=33  Identities=21%  Similarity=0.569  Sum_probs=31.5

Q ss_pred             CCCCcccccCc--CCcccCCCccccccccccCCCc
Q 047746           89 ATVPRVFSCNY--CRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        89 ~tgekpf~C~~--Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      ++++|||.|.+  |+|.|...++|..|+++|+|||
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            67899999988  9999999999999999999996

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=8.3e-10  Score=64.63  Aligned_cols=29  Identities=34%  Similarity=0.808  Sum_probs=27.2

Q ss_pred             cccccCc--CCcccCCCccccccccccCCCc
Q 047746           93 RVFSCNY--CRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        93 kpf~C~~--Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      |||.|++  |+|.|...++|.+|+|+|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6899965  9999999999999999999996

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=7.9e-10  Score=64.17  Aligned_cols=28  Identities=25%  Similarity=0.662  Sum_probs=27.0

Q ss_pred             cccccCc--CCcccCCCccccccccccCCC
Q 047746           93 RVFSCNY--CRRKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        93 kpf~C~~--Cgk~F~~~~~L~~H~r~Htge  120 (247)
                      |||.|.+  |+|.|...++|..|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899999  999999999999999999997

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=6e-09  Score=60.34  Aligned_cols=29  Identities=17%  Similarity=0.177  Sum_probs=25.0

Q ss_pred             ccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746          121 RTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       121 kp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      |||+|..                +.|||+| ++++|++|+|+|+||
T Consensus         1 kp~~C~~----------------~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTF----------------EGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCS----------------TTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCC----------------CCCCceECChhHhhhhcCcCcCC
Confidence            6899982                3478999 899999999999997

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=7.5e-10  Score=64.32  Aligned_cols=28  Identities=25%  Similarity=0.660  Sum_probs=26.9

Q ss_pred             cccccCc--CCcccCCCccccccccccCCC
Q 047746           93 RVFSCNY--CRRKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        93 kpf~C~~--Cgk~F~~~~~L~~H~r~Htge  120 (247)
                      |||.|++  |+|+|...++|..|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899988  999999999999999999997

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.8e-09  Score=65.34  Aligned_cols=31  Identities=19%  Similarity=0.423  Sum_probs=28.0

Q ss_pred             CCCCcccccCcCCcccCCCcccccccc-ccCC
Q 047746           89 ATVPRVFSCNYCRRKFYSSQALGGHQN-AHKR  119 (247)
Q Consensus        89 ~tgekpf~C~~Cgk~F~~~~~L~~H~r-~Htg  119 (247)
                      |+|||||+|++|+|.|....+|..|++ .|++
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            899999999999999999999999975 4554

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=4.9e-09  Score=60.78  Aligned_cols=29  Identities=17%  Similarity=0.350  Sum_probs=25.0

Q ss_pred             ccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746          121 RTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       121 kp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      |||.|..                +.|||+| ++++|++|+|+|+||
T Consensus         1 kp~~C~~----------------~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTF----------------EGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCS----------------TTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCC----------------CCCCceECcHHHcCccccccCCC
Confidence            6899972                3577999 899999999999997

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.43  E-value=2e-08  Score=58.93  Aligned_cols=29  Identities=28%  Similarity=0.678  Sum_probs=27.2

Q ss_pred             CcccccCc--CCcccCCCccccccccccCCC
Q 047746           92 PRVFSCNY--CRRKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        92 ekpf~C~~--Cgk~F~~~~~L~~H~r~Htge  120 (247)
                      ||||.|.+  |+|.|....+|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999999  999999999999999999864

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=2e-08  Score=56.01  Aligned_cols=19  Identities=32%  Similarity=0.580  Sum_probs=17.1

Q ss_pred             CCCCCc-CchhHHHHhhhcC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHt  163 (247)
                      .|||+| +++.|..|+|+||
T Consensus         7 eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           7 ECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             SSCCEESSHHHHHHHHHHHH
T ss_pred             CCcCeeccCcccccCccCCC
Confidence            567999 8999999999996

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.40  E-value=7.9e-08  Score=56.32  Aligned_cols=30  Identities=27%  Similarity=0.321  Sum_probs=25.8

Q ss_pred             CccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746          120 ERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       120 ekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      ||||.|.                .+.|+|.| +..+|++|+|+|+.+
T Consensus         1 ErP~~C~----------------~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCD----------------HPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCC----------------CTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECc----------------CCCCCCeeCCHHHHHHHhhhccCC
Confidence            7899998                24578999 899999999999864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.40  E-value=8.2e-09  Score=59.29  Aligned_cols=27  Identities=33%  Similarity=0.672  Sum_probs=25.8

Q ss_pred             cccccCc--CCcccCCCccccccccccCC
Q 047746           93 RVFSCNY--CRRKFYSSQALGGHQNAHKR  119 (247)
Q Consensus        93 kpf~C~~--Cgk~F~~~~~L~~H~r~Htg  119 (247)
                      |||+|++  |+|.|....+|..|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899998  99999999999999999987

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=2.5e-08  Score=56.70  Aligned_cols=26  Identities=35%  Similarity=0.742  Sum_probs=24.8

Q ss_pred             cccccCc--CCcccCCCccccccccccC
Q 047746           93 RVFSCNY--CRRKFYSSQALGGHQNAHK  118 (247)
Q Consensus        93 kpf~C~~--Cgk~F~~~~~L~~H~r~Ht  118 (247)
                      |||.|++  |+|.|....+|.+|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899998  9999999999999999996

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.35  E-value=4.6e-08  Score=56.05  Aligned_cols=28  Identities=29%  Similarity=0.401  Sum_probs=24.1

Q ss_pred             ccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746          121 RTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus       121 kp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      |||.|..                +.|||+| ++++|++|+|+|+|
T Consensus         1 Kp~~C~~----------------~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPV----------------ESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCS----------------TTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCC----------------CCCCcEECchhHhhhhcCccCC
Confidence            6899982                3578999 89999999999997

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.30  E-value=3.7e-08  Score=59.14  Aligned_cols=31  Identities=55%  Similarity=1.252  Sum_probs=28.4

Q ss_pred             CcccccCcCCcccCCCccccccccccCCCcc
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRERT  122 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp  122 (247)
                      .+.|+|.+|+|.|.+.++|++|++.|..+|.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            4679999999999999999999999998764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=1.2e-07  Score=53.70  Aligned_cols=27  Identities=22%  Similarity=0.230  Sum_probs=23.2

Q ss_pred             ccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcC
Q 047746          121 RTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus       121 kp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHt  163 (247)
                      |||.|..                +.|||+| +..+|++|+|+||
T Consensus         1 rPf~C~~----------------~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPF----------------DGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCS----------------TTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCC----------------CCcCCcCCCHHHHHHHHhhcc
Confidence            6899983                4578999 8999999999997

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.11  E-value=1.6e-07  Score=52.01  Aligned_cols=27  Identities=33%  Similarity=0.657  Sum_probs=25.5

Q ss_pred             CcccccCcCCcccCCCccccccccccC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHK  118 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Ht  118 (247)
                      ||||.|++||++|..+...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999985

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=1.7e-07  Score=53.85  Aligned_cols=33  Identities=21%  Similarity=0.485  Sum_probs=30.4

Q ss_pred             CcccccCcCCcccCCCccccccccccCCCcccc
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMA  124 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htgekp~~  124 (247)
                      .|...|+.|||.|.....|.+|.-.|++||||.
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            456789999999999999999999999999984

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=5e-07  Score=48.47  Aligned_cols=26  Identities=23%  Similarity=0.489  Sum_probs=24.7

Q ss_pred             ccccCcCCcccCCCccccccccccCC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKR  119 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htg  119 (247)
                      |++|+.|+|.|..+..|+.|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57999999999999999999999986

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=8.1e-07  Score=48.55  Aligned_cols=27  Identities=37%  Similarity=0.594  Sum_probs=25.4

Q ss_pred             ccccCcCCcccCCCccccccccccCCC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htge  120 (247)
                      .+.|.+|||.|..++.|++|+-+|+||
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            478999999999999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=6.7e-06  Score=43.99  Aligned_cols=20  Identities=35%  Similarity=0.624  Sum_probs=18.7

Q ss_pred             CCCCCc-CchhHHHHhhhcCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtg  164 (247)
                      .|+|.| ++..|+.|+|.|+|
T Consensus         6 ~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           6 VCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             TTTBCCCCHHHHHHHGGGCCC
T ss_pred             hhhhHhcchhHHHHHhhccCC
Confidence            788999 89999999999997

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=1.4e-05  Score=45.75  Aligned_cols=25  Identities=24%  Similarity=0.422  Sum_probs=22.4

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVVPPQ  169 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgekPy~  169 (247)
                      .|||.| ....|.+|.-.|+|||||.
T Consensus        10 ~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1          10 ICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             TTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             HHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            788999 5779999999999999983

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.56  E-value=1.2e-05  Score=44.29  Aligned_cols=26  Identities=35%  Similarity=0.478  Sum_probs=23.5

Q ss_pred             CccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcC
Q 047746          120 ERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus       120 ekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHt  163 (247)
                      ||||.|.                  +||+.| ++...++|.++|.
T Consensus         1 EkPf~C~------------------~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACD------------------ICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECT------------------TTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccc------------------hhhhhhhcchhhhhhhhhcc
Confidence            6899998                  778999 8999999999995

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=6.3e-06  Score=45.32  Aligned_cols=27  Identities=22%  Similarity=0.431  Sum_probs=25.9

Q ss_pred             cccCcCCcccCCCccccccccccCCCc
Q 047746           95 FSCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        95 f~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      |.|.+||......+-|+.|+|.|++||
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            899999999999999999999999986

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=9.7e-06  Score=44.41  Aligned_cols=29  Identities=28%  Similarity=0.473  Sum_probs=27.0

Q ss_pred             CcccccCcCCcccCCCccccccccccCCC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htge  120 (247)
                      +|||+|..|...-..++.|..|.|.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999984

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.34  E-value=9.7e-06  Score=43.60  Aligned_cols=26  Identities=35%  Similarity=0.640  Sum_probs=24.9

Q ss_pred             ccCcCCcccCCCccccccccccCCCc
Q 047746           96 SCNYCRRKFYSSQALGGHQNAHKRER  121 (247)
Q Consensus        96 ~C~~Cgk~F~~~~~L~~H~r~Htgek  121 (247)
                      .|+.|.|.|.++..|+.|-|.|+|||
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999986

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.31  E-value=2e-05  Score=41.77  Aligned_cols=24  Identities=42%  Similarity=0.893  Sum_probs=23.0

Q ss_pred             cccCcCCcccCCCccccccccccC
Q 047746           95 FSCNYCRRKFYSSQALGGHQNAHK  118 (247)
Q Consensus        95 f~C~~Cgk~F~~~~~L~~H~r~Ht  118 (247)
                      |+|..|.+.|..+++|.+|+|+|+
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999996

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=5.3e-05  Score=41.19  Aligned_cols=21  Identities=38%  Similarity=0.536  Sum_probs=19.3

Q ss_pred             CCCCCc-CchhHHHHhhhcCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtge  165 (247)
                      .|||+| .++.|++|+-+||||
T Consensus         7 ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           7 ECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             TTCCEESSHHHHHHHGGGTSCC
T ss_pred             HHhHHHHHHHHHHHHhhcccCC
Confidence            678999 899999999999997

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=1.5e-05  Score=44.64  Aligned_cols=29  Identities=21%  Similarity=0.508  Sum_probs=26.7

Q ss_pred             CcccccCcCCcccCCCccccccccccCCC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htge  120 (247)
                      ||||.|++|+..|..+..+.-|.|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999999874

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00013  Score=42.21  Aligned_cols=31  Identities=13%  Similarity=0.031  Sum_probs=25.2

Q ss_pred             cccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746          122 TMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       122 p~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      -|.|.+..|.             .-++.| ....|..|+|+||||
T Consensus         2 ~y~C~W~~C~-------------R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCS-------------RELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCT-------------TTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCC-------------CCCCcchhHHHHHHHHhhcCCC
Confidence            4677776666             557889 788999999999997

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=3.7e-05  Score=41.70  Aligned_cols=26  Identities=23%  Similarity=0.492  Sum_probs=24.8

Q ss_pred             cccccCcCCcccCCCccccccccccC
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHK  118 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Ht  118 (247)
                      |||+|..|...-..++.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999996

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00019  Score=39.13  Aligned_cols=28  Identities=25%  Similarity=0.192  Sum_probs=21.7

Q ss_pred             CccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746          120 ERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       120 ekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      ||||+|.  .|.                .+- .++.|..|.|.|+|.
T Consensus         1 erpfkcq--lcs----------------y~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQ--ICP----------------YASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECS--SSS----------------CEESSHHHHHHHHTTCCSC
T ss_pred             CCcceee--ecc----------------cccCCchheEEeeecccCc
Confidence            6899998  554                223 477999999999984

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.81  E-value=0.00036  Score=37.30  Aligned_cols=23  Identities=26%  Similarity=0.364  Sum_probs=20.9

Q ss_pred             CCCCCCc-CchhHHHHhhhcCCCC
Q 047746          144 PLHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       144 ~~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      +.|.|.| .+..|+.|-|.|+|||
T Consensus         4 p~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           4 PTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             TTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cchHHHHHHhHhhhhccccccCCC
Confidence            4788999 8899999999999996

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.00015  Score=40.73  Aligned_cols=28  Identities=25%  Similarity=0.622  Sum_probs=24.9

Q ss_pred             cccccCc--CCcccCCCccccccc-cccCCC
Q 047746           93 RVFSCNY--CRRKFYSSQALGGHQ-NAHKRE  120 (247)
Q Consensus        93 kpf~C~~--Cgk~F~~~~~L~~H~-r~Htge  120 (247)
                      |||.|.+  |.|.|...+.-..|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6899998  999999999999998 888754

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.00042  Score=38.40  Aligned_cols=28  Identities=11%  Similarity=0.254  Sum_probs=22.3

Q ss_pred             ccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCC
Q 047746          121 RTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQG  164 (247)
Q Consensus       121 kp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtg  164 (247)
                      |||.|+.                +.|+|++ .++.|++|++.+.|
T Consensus         1 KPY~Ck~----------------~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKL----------------PGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCS----------------TTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeeccc----------------CCCCcccCCHHHHHHHHHhhCC
Confidence            6899982                2477889 79999999997654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.54  E-value=0.00015  Score=43.51  Aligned_cols=26  Identities=23%  Similarity=0.559  Sum_probs=22.9

Q ss_pred             CCCcccccCcCCcccCCCcccccccc
Q 047746           90 TVPRVFSCNYCRRKFYSSQALGGHQN  115 (247)
Q Consensus        90 tgekpf~C~~Cgk~F~~~~~L~~H~r  115 (247)
                      +|-|||.|..|+|+|-+...+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46799999999999999999988853

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.53  E-value=0.00013  Score=40.18  Aligned_cols=28  Identities=32%  Similarity=0.612  Sum_probs=25.6

Q ss_pred             cccccCc--CCcccCCCccccccccccCCC
Q 047746           93 RVFSCNY--CRRKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        93 kpf~C~~--Cgk~F~~~~~L~~H~r~Htge  120 (247)
                      |||.|.+  |.|.|.+...|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5899977  999999999999999999986

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.00033  Score=38.55  Aligned_cols=28  Identities=29%  Similarity=0.675  Sum_probs=24.4

Q ss_pred             cccccCcCCcccCCCccccccccc-cCCC
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNA-HKRE  120 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~-Htge  120 (247)
                      |||.|.+|..+-..+++|+.|.++ |..|
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            689999999999999999999875 5554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0008  Score=37.63  Aligned_cols=29  Identities=14%  Similarity=0.080  Sum_probs=22.9

Q ss_pred             ccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHh-hhcCCC
Q 047746          121 RTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHA-AMHQGV  165 (247)
Q Consensus       121 kp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~-riHtge  165 (247)
                      |||.|.                ++.|.|+| ..+.-.+|+ |+|..|
T Consensus         1 kPY~C~----------------~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCE----------------HEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECC----------------STTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCcccc----------------CCChhhhhcchhhhhhhccccccCC
Confidence            688887                34577999 788888997 999764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.25  E-value=0.00022  Score=39.55  Aligned_cols=27  Identities=15%  Similarity=0.554  Sum_probs=24.0

Q ss_pred             cccccCc--CCcccCCCccccccccccCC
Q 047746           93 RVFSCNY--CRRKFYSSQALGGHQNAHKR  119 (247)
Q Consensus        93 kpf~C~~--Cgk~F~~~~~L~~H~r~Htg  119 (247)
                      |||.|.+  |+|.+...+.|..|++.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899988  99999999999999987654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.25  E-value=0.00022  Score=39.04  Aligned_cols=29  Identities=31%  Similarity=0.606  Sum_probs=27.2

Q ss_pred             CcccccCcCCcccCCCccccccccccCCC
Q 047746           92 PRVFSCNYCRRKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        92 ekpf~C~~Cgk~F~~~~~L~~H~r~Htge  120 (247)
                      +..|.|..|...|...-.|..|+-.|+||
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56899999999999999999999999986

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.13  E-value=0.00037  Score=39.03  Aligned_cols=26  Identities=27%  Similarity=0.583  Sum_probs=22.7

Q ss_pred             ccccCcCCcccCCCcccccccc-ccCC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQN-AHKR  119 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r-~Htg  119 (247)
                      ||.|.+|+|.|....-|.+|+. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            7999999999999999999964 5655

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0021  Score=35.02  Aligned_cols=22  Identities=23%  Similarity=0.190  Sum_probs=18.0

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVV  166 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgek  166 (247)
                      +||..- .++-|++|.|.||+|+
T Consensus         6 ~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           6 ECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             TTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccCcccCCHHHHHHHHHHhcCCC
Confidence            555555 6889999999999985

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.90  E-value=0.0015  Score=38.54  Aligned_cols=23  Identities=13%  Similarity=0.247  Sum_probs=19.8

Q ss_pred             CCCCCc-CchhHHHHhhhcCCCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGVVP  167 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtgekP  167 (247)
                      +|+|.| ....|..||+.|..++-
T Consensus        10 ~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_          10 FCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             TTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCCCccCCcccccchHhhhcchHH
Confidence            788999 77899999999987654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.88  E-value=0.00033  Score=38.27  Aligned_cols=25  Identities=24%  Similarity=0.611  Sum_probs=22.4

Q ss_pred             cccccCc--CCcccCCCcccccccccc
Q 047746           93 RVFSCNY--CRRKFYSSQALGGHQNAH  117 (247)
Q Consensus        93 kpf~C~~--Cgk~F~~~~~L~~H~r~H  117 (247)
                      .||+|..  |+|.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4799976  999999999999998877

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0015  Score=36.29  Aligned_cols=28  Identities=25%  Similarity=0.380  Sum_probs=23.9

Q ss_pred             CccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcCCC
Q 047746          120 ERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       120 ekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      ||||.|.                  +|+..| ++.-+.-|.|.|.|.
T Consensus         1 ekp~~cp------------------ic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCP------------------VCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEET------------------TTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccc------------------hHHHHhhccccceEeeecccCc
Confidence            6899998                  667789 899999999999874

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0016  Score=35.10  Aligned_cols=25  Identities=16%  Similarity=0.210  Sum_probs=19.8

Q ss_pred             ccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcC
Q 047746          121 RTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus       121 kp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHt  163 (247)
                      |||+|.  .|.                .+- .++.|++|+|||.
T Consensus         2 kp~kck--~cd----------------yaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCK--TCD----------------YAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECS--SSC----------------CEESSHHHHHHHHHHSC
T ss_pred             CCcccc--ccc----------------chhcchhhHhhhhhccc
Confidence            789998  444                444 6889999999996

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.66  E-value=0.0033  Score=32.98  Aligned_cols=19  Identities=21%  Similarity=0.445  Sum_probs=17.4

Q ss_pred             CCCCCc-CchhHHHHhhhcC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHt  163 (247)
                      .|.+.| .++.|.+|+|+|.
T Consensus         5 lcersfveksalsrhqrvhk   24 (26)
T d1znfa_           5 LCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             SSCCBCSSHHHHHHHGGGTC
T ss_pred             chHHHHHHHHHHHHHHHhhc
Confidence            788999 8999999999995

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.33  E-value=0.0029  Score=34.54  Aligned_cols=21  Identities=19%  Similarity=0.221  Sum_probs=17.8

Q ss_pred             CCCCCc-CchhHHHHhhhcCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtge  165 (247)
                      .|.|.| .-..|.+|..+|+||
T Consensus         9 gc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           9 GCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SCCCEESSTTHHHHHHHHHHTC
T ss_pred             cccccchhhhhhhhhhccccCC
Confidence            366889 677999999999986

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.62  E-value=0.0054  Score=33.29  Aligned_cols=27  Identities=15%  Similarity=0.113  Sum_probs=21.3

Q ss_pred             ccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcC
Q 047746          121 RTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus       121 kp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHt  163 (247)
                      .||+|....                |+|.| .++-|++|.++|.
T Consensus         2 ~py~c~heg----------------cdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEG----------------CDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTT----------------CCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccC----------------ccccccCHHHHhhhhhccC
Confidence            488888433                56888 7999999999983

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.22  E-value=0.0015  Score=39.01  Aligned_cols=22  Identities=18%  Similarity=0.270  Sum_probs=19.2

Q ss_pred             CCccccCCCCccccCCCceecC
Q 047746          187 MPMFMEDDDIDLFWPGSFRQVS  208 (247)
Q Consensus       187 ~P~~~~~c~~~f~~~~s~~~~~  208 (247)
                      +||-|..|+|.|.|..+|.+|.
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhh
Confidence            6888899999999999998874

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.73  E-value=0.0047  Score=33.08  Aligned_cols=22  Identities=23%  Similarity=0.637  Sum_probs=19.8

Q ss_pred             ccccCcCCcccCCCcccccccc
Q 047746           94 VFSCNYCRRKFYSSQALGGHQN  115 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r  115 (247)
                      ||+|..|||.|..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6999999999999999998853

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.42  E-value=0.0054  Score=33.37  Aligned_cols=23  Identities=26%  Similarity=0.660  Sum_probs=21.4

Q ss_pred             ccccCcCCcccCCCccccccccc
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNA  116 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~  116 (247)
                      ||.|.+|.-.|..+.+|..|+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            69999999999999999999864

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.31  E-value=0.018  Score=31.20  Aligned_cols=21  Identities=24%  Similarity=0.521  Sum_probs=18.8

Q ss_pred             CCCCCc-CchhHHHHhhhcCCC
Q 047746          145 LHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~riHtge  165 (247)
                      .|...| +...|+.||-.|+||
T Consensus         9 ~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           9 VCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             SSCCEESSHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHHhheeeeecccCC
Confidence            677889 899999999999996

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.99  E-value=0.019  Score=33.60  Aligned_cols=29  Identities=21%  Similarity=0.332  Sum_probs=22.8

Q ss_pred             CCccccccccccCcccccccCCCCCCCCCCCc-CchhHHHHhhhcC
Q 047746          119 RERTMAKRAMRMGIFSDRYTSLASLPLHGSAF-RSLGIKAHAAMHQ  163 (247)
Q Consensus       119 gekp~~C~~~~Cg~~~k~F~~~s~L~~hgk~F-~~~~L~~H~riHt  163 (247)
                      .+|||.|..                +.|+..| .-..|..|++.|.
T Consensus         3 ddkPF~C~~----------------pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTA----------------PGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCC----------------TTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCC----------------CCccccccchHHHHHhhhhhe
Confidence            489999984                3466778 7789999998885

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.68  E-value=0.0061  Score=35.75  Aligned_cols=28  Identities=25%  Similarity=0.592  Sum_probs=24.1

Q ss_pred             CCcccccCc--CCcccCCCccccccccccC
Q 047746           91 VPRVFSCNY--CRRKFYSSQALGGHQNAHK  118 (247)
Q Consensus        91 gekpf~C~~--Cgk~F~~~~~L~~H~r~Ht  118 (247)
                      .+|||.|..  |+.+|.....|..|+..|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            379999955  9999999999999987764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.41  E-value=0.0052  Score=33.50  Aligned_cols=24  Identities=33%  Similarity=0.647  Sum_probs=21.1

Q ss_pred             cccccCcCCcccCCCccccccccc
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNA  116 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~  116 (247)
                      |||+|.+|.---.+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            689999999888899999999764

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.056  Score=29.35  Aligned_cols=16  Identities=25%  Similarity=0.262  Sum_probs=12.3

Q ss_pred             CchhHHHHhhh-cCCCC
Q 047746          151 RSLGIKAHAAM-HQGVV  166 (247)
Q Consensus       151 ~~~~L~~H~ri-Htgek  166 (247)
                      .+++|+.|.++ |..||
T Consensus        14 dssnlkthiktkhskek   30 (30)
T d1klra_          14 DSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CSHHHHHHHHHHTSSCC
T ss_pred             cchhhhhhhhcccccCC
Confidence            57899999986 66554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.70  E-value=0.009  Score=34.16  Aligned_cols=27  Identities=33%  Similarity=0.629  Sum_probs=21.4

Q ss_pred             ccccCc--CC---cccCCCccccccccccCCC
Q 047746           94 VFSCNY--CR---RKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        94 pf~C~~--Cg---k~F~~~~~L~~H~r~Htge  120 (247)
                      .|.|..  |.   +.|.....|..|+|+||||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            356643  54   5699999999999999997

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.94  E-value=0.025  Score=30.30  Aligned_cols=26  Identities=27%  Similarity=0.312  Sum_probs=23.0

Q ss_pred             ccccCcCCcccCCCccccccccccCC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKR  119 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htg  119 (247)
                      |-+|.+|.....++.+|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            45899999999999999999999853

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=88.52  E-value=0.082  Score=29.19  Aligned_cols=20  Identities=40%  Similarity=0.531  Sum_probs=16.0

Q ss_pred             CCCCCc-CchhHHHHh-hhcCC
Q 047746          145 LHGSAF-RSLGIKAHA-AMHQG  164 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~-riHtg  164 (247)
                      +|++.| ++.-|-+|+ ++|.|
T Consensus         6 ~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           6 LCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             TTCCEESSHHHHHHHHTTTSCC
T ss_pred             cccchhhHHHHHHHHHHHHhcC
Confidence            788999 888888886 46776

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.51  E-value=0.07  Score=29.31  Aligned_cols=23  Identities=26%  Similarity=0.521  Sum_probs=19.1

Q ss_pred             CCCCCCCc-CchhHHHHhhhcCCC
Q 047746          143 LPLHGSAF-RSLGIKAHAAMHQGV  165 (247)
Q Consensus       143 L~~hgk~F-~~~~L~~H~riHtge  165 (247)
                      ++.|+-.| ..+.|..|.-.||||
T Consensus         8 f~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           8 FADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             SGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CCCcchhhccchhhhHHhhhhcCC
Confidence            45677778 678999999999997

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.85  E-value=0.029  Score=29.19  Aligned_cols=22  Identities=23%  Similarity=0.638  Sum_probs=19.7

Q ss_pred             ccccCcCCcccCCCcccccccc
Q 047746           94 VFSCNYCRRKFYSSQALGGHQN  115 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r  115 (247)
                      ||+|..|...|-.+..|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999988863

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.53  E-value=0.029  Score=34.44  Aligned_cols=26  Identities=23%  Similarity=0.626  Sum_probs=22.6

Q ss_pred             cccccCcCCcccCCCccccccccccC
Q 047746           93 RVFSCNYCRRKFYSSQALGGHQNAHK  118 (247)
Q Consensus        93 kpf~C~~Cgk~F~~~~~L~~H~r~Ht  118 (247)
                      ..|.|..|+|.|.....|+.|..-|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35899999999999999999987664

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.37  E-value=0.023  Score=30.20  Aligned_cols=24  Identities=29%  Similarity=0.728  Sum_probs=20.4

Q ss_pred             cccCc--CCcccCCCccccccccccC
Q 047746           95 FSCNY--CRRKFYSSQALGGHQNAHK  118 (247)
Q Consensus        95 f~C~~--Cgk~F~~~~~L~~H~r~Ht  118 (247)
                      |.|.+  |+|.|.....|+.|+-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            67765  9999999999999988775

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.73  E-value=0.22  Score=26.78  Aligned_cols=17  Identities=12%  Similarity=0.126  Sum_probs=13.8

Q ss_pred             CCCCCc-CchhHHHHhhh
Q 047746          145 LHGSAF-RSLGIKAHAAM  161 (247)
Q Consensus       145 ~hgk~F-~~~~L~~H~ri  161 (247)
                      .|.-+| .+.+|..||+.
T Consensus         6 ~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           6 YCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             SSSCEESSHHHHHHHHHS
T ss_pred             eeeeeEeeccchhHhhhh
Confidence            555678 89999999985

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.66  E-value=0.059  Score=30.53  Aligned_cols=26  Identities=19%  Similarity=0.552  Sum_probs=21.1

Q ss_pred             ccccCcCCcccCCCccccccccccCC
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNAHKR  119 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~Htg  119 (247)
                      .|.|..|+|.|.....+.+|-..-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            59999999999999888888654433

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.31  E-value=0.22  Score=26.85  Aligned_cols=11  Identities=9%  Similarity=0.190  Sum_probs=9.2

Q ss_pred             CchhHHHHhhh
Q 047746          151 RSLGIKAHAAM  161 (247)
Q Consensus       151 ~~~~L~~H~ri  161 (247)
                      +.++|..|++.
T Consensus        14 q~SnL~kH~kk   24 (29)
T d1x5wa2          14 QPSNLSKHMKK   24 (29)
T ss_dssp             SHHHHHHHHHH
T ss_pred             CcchHHHHHHH
Confidence            58899999875

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=82.50  E-value=0.06  Score=28.06  Aligned_cols=23  Identities=22%  Similarity=0.712  Sum_probs=20.0

Q ss_pred             ccccCcCCcccCCCccccccccc
Q 047746           94 VFSCNYCRRKFYSSQALGGHQNA  116 (247)
Q Consensus        94 pf~C~~Cgk~F~~~~~L~~H~r~  116 (247)
                      .|.|+.|-|.|.++.++..|.++
T Consensus         1 vypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           1 VYPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCCchhhHHhccccCceEEEEE
Confidence            38899999999999999888664

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=81.37  E-value=0.062  Score=29.53  Aligned_cols=28  Identities=21%  Similarity=0.592  Sum_probs=24.1

Q ss_pred             cccccCc--CCcccCCCccccccccccCCC
Q 047746           93 RVFSCNY--CRRKFYSSQALGGHQNAHKRE  120 (247)
Q Consensus        93 kpf~C~~--Cgk~F~~~~~L~~H~r~Htge  120 (247)
                      |.|.|.+  |+..|....-|..|.-.||||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            5688875  999999999999999999886