Citrus Sinensis ID: 047790
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 885 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LYN8 | 1192 | Leucine-rich repeat recep | yes | no | 0.962 | 0.714 | 0.420 | 0.0 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.972 | 0.782 | 0.342 | 1e-130 | |
| C0LGV1 | 1135 | LRR receptor-like serine/ | no | no | 0.944 | 0.736 | 0.347 | 1e-122 | |
| Q9M2Z1 | 1002 | Leucine-rich repeat recep | no | no | 0.905 | 0.799 | 0.336 | 1e-119 | |
| Q8VZG8 | 1045 | Probable LRR receptor-lik | no | no | 0.955 | 0.809 | 0.316 | 1e-115 | |
| Q9SYQ8 | 980 | Receptor protein kinase C | no | no | 0.903 | 0.816 | 0.331 | 1e-114 | |
| Q9FIZ3 | 1252 | LRR receptor-like serine/ | no | no | 0.926 | 0.654 | 0.314 | 1e-113 | |
| O49545 | 1003 | Leucine-rich repeat recep | no | no | 0.927 | 0.818 | 0.334 | 1e-113 | |
| Q9LHP4 | 1141 | Receptor-like protein kin | no | no | 0.927 | 0.719 | 0.329 | 1e-112 | |
| Q9SGP2 | 996 | Receptor-like protein kin | no | no | 0.900 | 0.800 | 0.335 | 1e-110 |
| >sp|Q9LYN8|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/1112 (42%), Positives = 580/1112 (52%), Gaps = 260/1112 (23%)
Query: 27 ERRSLVHFKNSLQNPQVLSGWNKTTR--HCHWFGVKCRHSRV------------------ 66
E SL+ FK SL+NP +LS WN ++ HC W GV C RV
Sbjct: 26 ETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTCLLGRVNSLSLPSLSLRGQIPKEI 85
Query: 67 ------VSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRL------ 114
L + G + P ++NL L+ LDLS N L G L +S L +L
Sbjct: 86 SSLKNLRELCLAGNQFSGKIPPEIWNLKHLQTLDLSGNSLTGLLPRLLSELPQLLYLDLS 145
Query: 115 -------------------KMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSE 155
L V N LSG IP ++G L+ L + + NSF+G++PSE
Sbjct: 146 DNHFSGSLPPSFFISLPALSSLDVSNNSLSGEIPPEIGKLSNLSNLYMGLNSFSGQIPSE 205
Query: 156 LGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLD 215
+G+I LK+ NG +P + L L LDLS N L S+P S L +LS L+
Sbjct: 206 IGNISLLKNFAAPSCFFNGPLPKEISKLKHLAKLDLSYNPLKCSIPKSF-GELHNLSILN 264
Query: 216 VSNNLLSGNIPPEIGNLKKLSDLYLGI----GPYQLSL---------------------- 249
+ + L G IPPE+GN K L L L GP L L
Sbjct: 265 LVSAELIGLIPPELGNCKSLKSLMLSFNSLSGPLPLELSEIPLLTFSAERNQLSGSLPSW 324
Query: 250 ----------------FVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINL 293
F G I EI +C MLK++SL++N LSG IPRELC SGSL I+L
Sbjct: 325 MGKWKVLDSLLLANNRFSGEIPHEIEDCPMLKHLSLASNLLSGSIPRELCGSGSLEAIDL 384
Query: 294 DGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSL 353
GN+LSGTIE+VFD C++L EL+L NN+I+GSIPE + +LPL DL NNFTG IP SL
Sbjct: 385 SGNLLSGTIEEVFDGCSSLGELLLTNNQINGSIPEDLWKLPLMALDLDSNNFTGEIPKSL 444
Query: 354 WNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLN 413
W S NLMEF A+ N LEG L EI NA +L++L LS N LT +IP++IG LT++ +L LN
Sbjct: 445 WKSTNLMEFTASYNRLEGYLPAEIGNAASLKRLVLSDNQLTGEIPREIGKLTSLSVLNLN 504
Query: 414 SNFFD------------------------GIIPMEFGDCISLNTLDLGSNNLNG------ 443
+N F G IP + L L L NNL+G
Sbjct: 505 ANMFQGKIPVELGDCTSLTTLDLGSNNLQGQIPDKITALAQLQCLVLSYNNLSGSIPSKP 564
Query: 444 --------------------------------------CVVVVYLLLNNNMLSGKIPGSL 465
C+V+V + L+NN LSG+IP SL
Sbjct: 565 SAYFHQIEMPDLSFLQHHGIFDLSYNRLSGPIPEELGECLVLVEISLSNNHLSGEIPASL 624
Query: 466 SRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL--------S 517
SRLTNLT L+L GN LTGSIP E G+SLK+QGL L +NQL G IPES G L +
Sbjct: 625 SRLTNLTILDLSGNALTGSIPKEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLNLT 684
Query: 518 GNKLYGSVPTSFGNLNGLTHLDLSCNELDG-----------IVGLYVQSNKFYGEIPPEL 566
NKL G VP S GNL LTH+DLS N L G +VGLY++ NKF GEIP EL
Sbjct: 685 KNKLDGPVPASLGNLKELTHMDLSFNNLSGELSSELSTMEKLVGLYIEQNKFTGEIPSEL 744
Query: 567 GNLVQLE------------------------YLDFSMNMLDGHIP-EKLCSLPYLLYLNL 601
GNL QLE +L+ + N L G +P + +C P L+
Sbjct: 745 GNLTQLEYLDVSENLLSGEIPTKICGLPNLEFLNLAKNNLRGEVPSDGVCQDPSKALLSG 804
Query: 602 ----------ADNRLEGEVPRS-----GICQNLSIISLT--------------GNKDLCE 632
+D ++EG RS G+ +II +D E
Sbjct: 805 NKELCGRVVGSDCKIEGTKLRSAWGIAGLMLGFTIIVFVFVFSLRRWAMTKRVKQRDDPE 864
Query: 633 KIMGSDCQILTFGKLA-LVGIVVGSVLVIAIIVFE---------------------NVIG 670
++ S + L L G L I I +FE N+IG
Sbjct: 865 RMEESRLKGFVDQNLYFLSGSRSREPLSINIAMFEQPLLKVRLGDIVEATDHFSKKNIIG 924
Query: 671 GGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730
GGF T +K +P +KTVAVKKLS+A Q +REF AEMETL VKH NLV LLGYCS E
Sbjct: 925 DGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSE 984
Query: 731 EKLLVYEYMVNGSLDDWLRNRAASL---DWGKRCKIAYGAARGISFLHHGFKPYIIHMDI 787
EKLLVYEYMVNGSLD WLRN+ L DW KR KIA GAARG++FLHHGF P+IIH DI
Sbjct: 985 EKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDI 1044
Query: 788 KTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYS 847
K SNILL+ FE KV+DFGLARLIS CESHVST A T GY+P EYGQ+ RA +GD+YS
Sbjct: 1045 KASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYS 1104
Query: 848 FGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
FGVILLELVTGK+PTGP+F++ +GGNLV W +
Sbjct: 1105 FGVILLELVTGKEPTGPDFKESEGGNLVGWAI 1136
|
Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 351/1025 (34%), Positives = 485/1025 (47%), Gaps = 164/1025 (16%)
Query: 1 MAKLLLCLMVFSLSFGTFTAIDEPKQERRSLVHFKNSLQNPQ-VLSGWNK-TTRHCHWFG 58
+A ++LC S SF +++E E R L+ FK L + L+ WN+ + C+W G
Sbjct: 8 LAIVILC----SFSFILVRSLNE---EGRVLLEFKAFLNDSNGYLASWNQLDSNPCNWTG 60
Query: 59 VKCRHSRVVSLV-IQTQSLKGPVSPFLFNLSSLR------------------------IL 93
+ C H R V+ V + +L G +SP + L LR +L
Sbjct: 61 IACTHLRTVTSVDLNGMNLSGTLSPLICKLHGLRKLNVSTNFISGPIPQDLSLCRSLEVL 120
Query: 94 DLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMP 153
DL N G + Q++ + LK L + EN L GSIP Q+G L+ L+ + + SN+ TG +P
Sbjct: 121 DLCTNRFHGVIPIQLTMIITLKKLYLCENYLFGSIPRQIGNLSSLQELVIYSNNLTGVIP 180
Query: 154 SELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSY 213
+ ++QL+ + NG +G IPS + L+ L L++NLL GSLP L K LQ+L+
Sbjct: 181 PSMAKLRQLRIIRAGRNGFSGVIPSEISGCESLKVLGLAENLLEGSLPKQLEK-LQNLTD 239
Query: 214 LDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNK 273
L + N LSG IPP +GN+ +L L L + F G I EIG + +K + L N+
Sbjct: 240 LILWQNRLSGEIPPSVGNISRLEVLAL-----HENYFTGSIPREIGKLTKMKRLYLYTNQ 294
Query: 274 LSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL 333
L+G IPRE+ N EI+ N L+G I F NL L L N + G IP + EL
Sbjct: 295 LTGEIPREIGNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHLFENILLGPIPRELGEL 354
Query: 334 P-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNM 392
L+ DL N G IP L L++ N LEG + I LD+S+N
Sbjct: 355 TLLEKLDLSINRLNGTIPQELQFLPYLVDLQLFDNQLEGKIPPLIGFYSNFSVLDMSANS 414
Query: 393 LTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVV----- 447
L+ IP + +L L SN G IP + C SL L LG N L G + +
Sbjct: 415 LSGPIPAHFCRFQTLILLSLGSNKLSGNIPRDLKTCKSLTKLMLGDNQLTGSLPIELFNL 474
Query: 448 ---VYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQ 504
L L+ N LSG I L +L NL L L N TG IPPE G+ K+ G + NQ
Sbjct: 475 QNLTALELHQNWLSGNISADLGKLKNLERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQ 534
Query: 505 LTGSIPESLG--------------------------------YLSGNKLYGSVPTSFGNL 532
LTG IP+ LG LS N+L G +P SFG+L
Sbjct: 535 LTGHIPKELGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRLTGEIPHSFGDL 594
Query: 533 NGLTHLDLSCN--------ELDGI----VGLYVQSNKFYGEIPPELGNLVQLEYLDFSMN 580
L L L N EL + + L + N G IP LGNL LE L + N
Sbjct: 595 TRLMELQLGGNLLSENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDN 654
Query: 581 MLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMGSDCQ 640
L G IP + +L LL N+++N L G VP + + Q + + GN LC S CQ
Sbjct: 655 KLSGEIPASIGNLMSLLICNISNNNLVGTVPDTAVFQRMDSSNFAGNHGLCNS-QRSHCQ 713
Query: 641 ILTFGK----------------LALVGIVVGSVLVI--------------AIIVFEN--- 667
L L + IV+GSV +I A + E+
Sbjct: 714 PLVPHSDSKLNWLINGSQRQKILTITCIVIGSVFLITFLGLCWTIKRREPAFVALEDQTK 773
Query: 668 ------------------------------VIGGGGFRTAFKGTMPDQKTVAVKKL-SQA 696
V+G G T +K M + +AVKKL S+
Sbjct: 774 PDVMDSYYFPKKGFTYQGLVDATRNFSEDVVLGRGACGTVYKAEMSGGEVIAVKKLNSRG 833
Query: 697 TG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRN--RAA 753
G D F AE+ TL ++H+N+V+L G+C LL+YEYM GSL + L+ +
Sbjct: 834 EGASSDNSFRAEISTLGKIRHRNIVKLYGFCYHQNSNLLLYEYMSKGSLGEQLQRGEKNC 893
Query: 754 SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813
LDW R +IA GAA G+ +LHH +P I+H DIK++NILL++ F+A V DFGLA+LI
Sbjct: 894 LLDWNARYRIALGAAEGLCYLHHDCRPQIVHRDIKSNNILLDERFQAHVGDFGLAKLIDL 953
Query: 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGN 873
S + A + GY+ EY + E+ DIYSFGV+LLEL+TGK P P + GG+
Sbjct: 954 SYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKPPVQPL---EQGGD 1010
Query: 874 LVDWV 878
LV+WV
Sbjct: 1011 LVNWV 1015
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGV1|RCH1_ARATH LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust.
Identities = 341/980 (34%), Positives = 487/980 (49%), Gaps = 144/980 (14%)
Query: 30 SLVHFKNSLQNPQVLSGWNKT-TRHCHWFGVKCRHS--------RVVS------------ 68
S +H NS P V SGWN + + C W + C S VVS
Sbjct: 45 SWLHSSNS-PPPSVFSGWNPSDSDPCQWPYITCSSSDNKLVTEINVVSVQLALPFPPNIS 103
Query: 69 -------LVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGE 121
LVI +L G +S + + S L ++DLS N L G++ + LK L+ L +
Sbjct: 104 SFTSLQKLVISNTNLTGAISSEIGDCSELIVIDLSSNSLVGEIPSSLGKLKNLQELCLNS 163
Query: 122 NQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNG-LNGTIPSRL 180
N L+G IP +LG L+ + + N + +P ELG I L+S+ GN L+G IP +
Sbjct: 164 NGLTGKIPPELGDCVSLKNLEIFDNYLSENLPLELGKISTLESIRAGGNSELSGKIPEEI 223
Query: 181 GDLTQLQDLDLSDNLLSGSLPVSL--LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDL 238
G+ L+ L L+ +SGSLPVSL L LQSLS V + +LSG IP E+GN +L +L
Sbjct: 224 GNCRNLKVLGLAATKISGSLPVSLGQLSKLQSLS---VYSTMLSGEIPKELGNCSELINL 280
Query: 239 YLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNML 298
+L Y L G + E+G L+ + L N L GPIP E+ SL I+L N
Sbjct: 281 FL----YDNDL-SGTLPKELGKLQNLEKMLLWQNNLHGPIPEEIGFMKSLNAIDLSMNYF 335
Query: 299 SGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSE 357
SGTI F +NL EL+L +N I+GSIP +S L F + N +G+IP + +
Sbjct: 336 SGTIPKSFGNLSNLQELMLSSNNITGSIPSILSNCTKLVQFQIDANQISGLIPPEIGLLK 395
Query: 358 NLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFF 417
L F N LEG++ E++ L+ LDLS N LT +P + L N+ L L SN
Sbjct: 396 ELNIFLGWQNKLEGNIPDELAGCQNLQALDLSQNYLTGSLPAGLFQLRNLTKLLLISNAI 455
Query: 418 DGIIPMEFGDCISLNTLDLGSNNLNGCVV--------VVYLLLNNNMLSGKIPGSLSRLT 469
G+IP+E G+C SL L L +N + G + + +L L+ N LSG +P +S
Sbjct: 456 SGVIPLEIGNCTSLVRLRLVNNRITGEIPKGIGFLQNLSFLDLSENNLSGPVPLEISNCR 515
Query: 470 NLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL--------SGNKL 521
L LNL N L G +P K+Q L + N LTG IP+SLG+L S N
Sbjct: 516 QLQMLNLSNNTLQGYLPLSLSSLTKLQVLDVSSNDLTGKIPDSLGHLISLNRLILSKNSF 575
Query: 522 YGSVPTSFGNLNGLTHLDLSCNELDGIV------------GLYVQSNKFYGEIPPELGNL 569
G +P+S G+ L LDLS N + G + L + N G IP + L
Sbjct: 576 NGEIPSSLGHCTNLQLLDLSSNNISGTIPEELFDIQDLDIALNLSWNSLDGFIPERISAL 635
Query: 570 VQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKD 629
+L LD S NML G + L L L+ LN++ NR G +P S + + L + GN
Sbjct: 636 NRLSVLDISHNMLSGDL-SALSGLENLVSLNISHNRFSGYLPDSKVFRQLIGAEMEGNNG 694
Query: 630 LCEK-----IMGSDCQILT------------FGKLALVGIVVGSVLVIAII--------- 663
LC K + + Q+ T G L V V+ + V+A+I
Sbjct: 695 LCSKGFRSCFVSNSSQLTTQRGVHSHRLRIAIGLLISVTAVLAVLGVLAVIRAKQMIRDD 754
Query: 664 -------------------------------VFENVIGGGGFRTAFKGTMPDQKTVAVKK 692
V NVIG G +K MP+++ +AVKK
Sbjct: 755 NDSETGENLWTWQFTPFQKLNFTVEHVLKCLVEGNVIGKGCSGIVYKAEMPNREVIAVKK 814
Query: 693 L-----------SQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741
L ++++G D F+AE++TL ++H+N+V+ LG C +LL+Y+YM N
Sbjct: 815 LWPVTVPNLNEKTKSSGVRD-SFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSN 873
Query: 742 GSLDDWLRNRA--ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE 799
GSL L R+ SL W R KI GAA+G+++LHH P I+H DIK +NIL+ FE
Sbjct: 874 GSLGSLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFE 933
Query: 800 AKVSDFGLARLISDCESHVSTDT-ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTG 858
+ DFGLA+L+ D + S++T A + GY+ EYG + + E+ D+YS+GV++LE++TG
Sbjct: 934 PYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTG 993
Query: 859 KQPTGPEFEDKDGGNLVDWV 878
KQP P DG ++VDWV
Sbjct: 994 KQPIDPTI--PDGLHIVDWV 1011
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M2Z1|BAME2_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS=Arabidopsis thaliana GN=BAM2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 322/956 (33%), Positives = 468/956 (48%), Gaps = 155/956 (16%)
Query: 17 TFTAIDEPKQERRSLVHFKNSL---QNPQVLSGWNKTTRHCHWFGVKC----RHSRVV-- 67
+FT + +P E +L+ K+S ++ +L+ WN +T C W GV C RH +
Sbjct: 18 SFT-VAKPITELHALLSLKSSFTIDEHSPLLTSWNLSTTFCSWTGVTCDVSLRHVTSLDL 76
Query: 68 --------------------SLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQ 107
+L + + GP+ P + NL LR L+LS N+ G +
Sbjct: 77 SGLNLSGTLSSDVAHLPLLQNLSLAANQISGPIPPQISNLYELRHLNLSNNVFNGSFPDE 136
Query: 108 VSN-LKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLD 166
+S+ L L++L + N L+G +P L LT+L + L N F+G++P+ G L+ L
Sbjct: 137 LSSGLVNLRVLDLYNNNLTGDLPVSLTNLTQLRHLHLGGNYFSGKIPATYGTWPVLEYLA 196
Query: 167 FSGNGLNGTIPSRLGDLTQLQDLDLS-DNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNI 225
SGN L G IP +G+LT L++L + N LP + NL L D +N L+G I
Sbjct: 197 VSGNELTGKIPPEIGNLTTLRELYIGYYNAFENGLPPE-IGNLSELVRFDAANCGLTGEI 255
Query: 226 PPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNS 285
PPEIG L+KL L+L Q++ F G IT E+G S LK + LSNN +G IP
Sbjct: 256 PPEIGKLQKLDTLFL-----QVNAFTGTITQELGLISSLKSMDLSNNMFTGEIPTS---- 306
Query: 286 GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNN 344
F + NL+ L L N++ G+IPE+I E+P L+V L NN
Sbjct: 307 --------------------FSQLKNLTLLNLFRNKLYGAIPEFIGEMPELEVLQLWENN 346
Query: 345 FTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNL 404
FTG IP L + L+ + +SN L G+L + + L L N L IP +G
Sbjct: 347 FTGSIPQKLGENGRLVILDLSSNKLTGTLPPNMCSGNRLMTLITLGNFLFGSIPDSLGKC 406
Query: 405 TNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVV---------YLLLNNN 455
++ +++ NF +G IP E L+ ++L N L G + + + L+NN
Sbjct: 407 ESLTRIRMGENFLNGSIPKELFGLPKLSQVELQDNYLTGELPISGGGVSGDLGQISLSNN 466
Query: 456 MLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSI-PESLG 514
LSG +P ++ L+ + L L GN +GSIPPE G ++ L HN +G I PE
Sbjct: 467 QLSGSLPAAIGNLSGVQKLLLDGNKFSGSIPPEIGRLQQLSKLDFSHNLFSGRIAPE--- 523
Query: 515 YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEY 574
+S KL LT +DLS NEL G +IP EL + L Y
Sbjct: 524 -ISRCKL-------------LTFVDLSRNELSG-------------DIPNELTGMKILNY 556
Query: 575 LDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKI 634
L+ S N L G IP + S+ L ++ + N L G VP +G + S GN LC
Sbjct: 557 LNLSRNHLVGSIPVTIASMQSLTSVDFSYNNLSGLVPSTGQFSYFNYTSFVGNSHLCGPY 616
Query: 635 MG--------SDCQILTFGK--------------LALVGIVVGSVL-------------- 658
+G S + L+ A+V I+ L
Sbjct: 617 LGPCGKGTHQSHVKPLSATTKLLLVLGLLFCSMVFAIVAIIKARSLRNASEAKAWRLTAF 676
Query: 659 ---------VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAE 707
V+ + +N+IG GG +KGTMP VAVK+L+ + D F AE
Sbjct: 677 QRLDFTCDDVLDSLKEDNIIGKGGAGIVYKGTMPKGDLVAVKRLATMSHGSSHDHGFNAE 736
Query: 708 METLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYG 766
++TL ++H+++V+LLG+CS E LLVYEYM NGSL + L + L W R KIA
Sbjct: 737 IQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWNTRYKIALE 796
Query: 767 AARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC-ESHVSTDTADT 825
AA+G+ +LHH P I+H D+K++NILL+ FEA V+DFGLA+ + D S + A +
Sbjct: 797 AAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGS 856
Query: 826 IGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLM 881
GY+ EY + +E+ D+YSFGV+LLEL+TGK+P G E DG ++V WV M
Sbjct: 857 YGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGKKPVG---EFGDGVDIVQWVRSM 909
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 304/961 (31%), Positives = 473/961 (49%), Gaps = 115/961 (11%)
Query: 4 LLLCLMVFSLSFGTFTAIDEPKQERRSLVHFKNSLQN---PQVLSGW---NKTTRHCHWF 57
LL+ +V S SF A+ +E +L+ +K++ N LS W N ++ W+
Sbjct: 31 LLIISIVLSCSF----AVSATVEEANALLKWKSTFTNQTSSSKLSSWVNPNTSSFCTSWY 86
Query: 58 GVKCRHSRVVSLVIQTQSLKGPVSPFLFN-LSSLRILDLSKNLLFGQLSPQVSNLKRLKM 116
GV C ++ L + ++G F F+ L +L +DLS N G +SP +L+
Sbjct: 87 GVACSLGSIIRLNLTNTGIEGTFEDFPFSSLPNLTFVDLSMNRFSGTISPLWGRFSKLEY 146
Query: 117 LSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTI 176
+ NQL G IP +LG L+ L+T+ L N G +PSE+G + ++ + N L G I
Sbjct: 147 FDLSINQLVGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPI 206
Query: 177 PSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLS 236
PS G+LT+L +L L N LSGS+P S + NL +L L + N L+G IP GNLK ++
Sbjct: 207 PSSFGNLTKLVNLYLFINSLSGSIP-SEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVT 265
Query: 237 DLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGN 296
L + QLS G I PEIGN + L +SL NKL+GPIP L N +L ++L N
Sbjct: 266 --LLNMFENQLS---GEIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLN 320
Query: 297 MLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWN 355
L+G+I ++ +L + N+++G +P+ +L L+ L+ N +G IP + N
Sbjct: 321 QLNGSIPPELGEMESMIDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIAN 380
Query: 356 SENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSN 415
S L +N G L I LE L L N +PK + + ++ ++ N
Sbjct: 381 STELTVLQLDTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVPKSLRDCKSLIRVRFKGN 440
Query: 416 FFDGIIPMEFGDCISLNTLDLGSNNLNGCVV--------VVYLLLNNNMLSGKIPGSLSR 467
F G I FG +LN +DL +NN +G + +V +L+NN ++G IP +
Sbjct: 441 SFSGDISEAFGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEIWN 500
Query: 468 LTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPE------SLGYL--SGN 519
+T L+ L+L N +TG +P + ++ L L N+L+G IP +L YL S N
Sbjct: 501 MTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSN 560
Query: 520 KLYGSVPTSFGNLNGLTHLDLSCNELDGIVG-----------LYVQSNKFYGEIPPELGN 568
+ +P + NL L +++LS N+LD + L + N+ GEI + +
Sbjct: 561 RFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRS 620
Query: 569 LVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNK 628
L LE LD S N L G IP + L +++++ N L+G +P + +N + GNK
Sbjct: 621 LQNLERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAAFRNAPPDAFEGNK 680
Query: 629 DLCEKIMGSD----CQILTFGK--------LALVGIVVGSVLVIAI-----IVFEN---- 667
DLC + + C I + K + ++ ++G+++++++ I F
Sbjct: 681 DLCGSVNTTQGLKPCSITSSKKSHKDRNLIIYILVPIIGAIIILSVCAGIFICFRKRTKQ 740
Query: 668 ---------------------------------------VIGGGGFRTAFKGTMPDQKTV 688
+IG GG +K +P+ +
Sbjct: 741 IEEHTDSESGGETLSIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHGKVYKAKLPNA-IM 799
Query: 689 AVKKLSQATG------QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNG 742
AVKKL++ T +EF E+ L ++H+N+V+L G+CS LVYEYM G
Sbjct: 800 AVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEYMERG 859
Query: 743 SLDDWLRN--RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA 800
SL L N A LDWGKR + G A +S++HH P I+H DI + NILL + +EA
Sbjct: 860 SLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEA 919
Query: 801 KVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQ 860
K+SDFG A+L+ S+ S A T GYV E A + E+ D+YSFGV+ LE++ G+
Sbjct: 920 KISDFGTAKLLKPDSSNWSA-VAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEH 978
Query: 861 P 861
P
Sbjct: 979 P 979
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SYQ8|CLV1_ARATH Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust.
Identities = 307/925 (33%), Positives = 468/925 (50%), Gaps = 125/925 (13%)
Query: 31 LVHFKNSLQNPQV--LSGWNKTTR---HCHWFGVKCRH-SRVVSLVIQTQSLKGPVSPFL 84
L++ K+S+ P+ L W ++ HC + GV C +RV+SL + L G +SP +
Sbjct: 31 LLNLKSSMIGPKGHGLHDWIHSSSPDAHCSFSGVSCDDDARVISLNVSFTPLFGTISPEI 90
Query: 85 FNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGEN-QLSGSIPSQ-LGLLTRLETIS 142
L+ L L L+ N G+L ++ +L LK+L++ N L+G+ P + L + LE +
Sbjct: 91 GMLTHLVNLTLAANNFTGELPLEMKSLTSLKVLNISNNGNLTGTFPGEILKAMVDLEVLD 150
Query: 143 LRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP- 201
+N+F G++P E+ ++K+LK L F GN +G IP GD+ L+ L L+ LSG P
Sbjct: 151 TYNNNFNGKLPPEMSELKKLKYLSFGGNFFSGEIPESYGDIQSLEYLGLNGAGLSGKSPA 210
Query: 202 -VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGN 260
+S LKNL+ + Y+ N+ +G +PPE G L KL L + G I + N
Sbjct: 211 FLSRLKNLREM-YIGYYNSY-TGGVPPEFGGLTKLEILDMAS-----CTLTGEIPTSLSN 263
Query: 261 CSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNN 320
L + L N L+G IP EL SL ++L N L+G I F N++ + L N
Sbjct: 264 LKHLHTLFLHINNLTGHIPPELSGLVSLKSLDLSINQLTGEIPQSFINLGNITLINLFRN 323
Query: 321 RISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISN 379
+ G IPE I ELP L+VF++ NNFT +P +L + NL+
Sbjct: 324 NLYGQIPEAIGELPKLEVFEVWENNFTLQLPANLGRNGNLI------------------- 364
Query: 380 AVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439
KLD+S N LT IPK + +++L L++NFF G IP E G C SL + + N
Sbjct: 365 -----KLDVSDNHLTGLIPKDLCRGEKLEMLILSNNFFFGPIPEELGKCKSLTKIRIVKN 419
Query: 440 NLNGCV--------VVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGD 491
LNG V +V + L +N SG++P ++S L + L N +G IPP G+
Sbjct: 420 LLNGTVPAGLFNLPLVTIIELTDNFFSGELPVTMSGDV-LDQIYLSNNWFSGEIPPAIGN 478
Query: 492 SLKVQGLYLGHNQLTGSIPESLGYL--------SGNKLYGSVPTSFGNLNGLTHLDLSCN 543
+Q L+L N+ G+IP + L S N + G +P S + L +DLS N
Sbjct: 479 FPNLQTLFLDRNRFRGNIPREIFELKHLSRINTSANNITGGIPDSISRCSTLISVDLSRN 538
Query: 544 ELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLAD 603
++G EIP + N+ L L+ S N L G IP + ++ L L+L+
Sbjct: 539 RING-------------EIPKGINNVKNLGTLNISGNQLTGSIPTGIGNMTSLTTLDLSF 585
Query: 604 NRLEGEVPRSGICQNLSIISLTGNKDLC------------------EKIMGSDCQILTFG 645
N L G VP G + S GN LC + S +I+
Sbjct: 586 NDLSGRVPLGGQFLVFNETSFAGNTYLCLPHRVSCPTRPGQTSDHNHTALFSPSRIVITV 645
Query: 646 KLALVGIVVGSVL-----------------------------VIAIIVFENVIGGGGFRT 676
A+ G+++ SV V+ + EN+IG GG
Sbjct: 646 IAAITGLILISVAIRQMNKKKNQKSLAWKLTAFQKLDFKSEDVLECLKEENIIGKGGAGI 705
Query: 677 AFKGTMPDQKTVAVKKL-SQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735
++G+MP+ VA+K+L + TG+ D F AE++TL ++H+++V+LLGY + + LL+
Sbjct: 706 VYRGSMPNNVDVAIKRLVGRGTGRSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLL 765
Query: 736 YEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL 794
YEYM NGSL + L ++ L W R ++A AA+G+ +LHH P I+H D+K++NILL
Sbjct: 766 YEYMPNGSLGELLHGSKGGHLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILL 825
Query: 795 NDYFEAKVSDFGLARLISD-CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILL 853
+ FEA V+DFGLA+ + D S + A + GY+ EY + +E+ D+YSFGV+LL
Sbjct: 826 DSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLL 885
Query: 854 ELVTGKQPTGPEFEDKDGGNLVDWV 878
EL+ GK+P G E +G ++V WV
Sbjct: 886 ELIAGKKPVG---EFGEGVDIVRWV 907
|
Involved in the detection of CLV3 and CLV3-like peptides, that act as extracellular signals regulating meristem maintenance. Acts with CLV3 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FIZ3|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 314/1000 (31%), Positives = 474/1000 (47%), Gaps = 180/1000 (18%)
Query: 54 CHWFG-VKCRHSRVV---SLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVS 109
C G + R R+V +L++Q L+GP+ + N +SL + + N L G L +++
Sbjct: 178 CRLTGLIPSRFGRLVQLQTLILQDNELEGPIPAEIGNCTSLALFAAAFNRLNGSLPAELN 237
Query: 110 NLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSG 169
LK L+ L++G+N SG IPSQLG L ++ ++L N G +P L ++ L++LD S
Sbjct: 238 RLKNLQTLNLGDNSFSGEIPSQLGDLVSIQYLNLIGNQLQGLIPKRLTELANLQTLDLSS 297
Query: 170 NGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSL------------------------L 205
N L G I + QL+ L L+ N LSGSLP ++ +
Sbjct: 298 NNLTGVIHEEFWRMNQLEFLVLAKNRLSGSLPKTICSNNTSLKQLFLSETQLSGEIPAEI 357
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL------------------------- 240
N QSL LD+SNN L+G IP + L +L++LYL
Sbjct: 358 SNCQSLKLLDLSNNTLTGQIPDSLFQLVELTNLYLNNNSLEGTLSSSISNLTNLQEFTLY 417
Query: 241 -----GIGPYQLSL-------------FVGRITPEIGNCSMLKYISLSNNKLSGPIPREL 282
G P ++ F G + EIGNC+ L+ I N+LSG IP +
Sbjct: 418 HNNLEGKVPKEIGFLGKLEIMYLYENRFSGEMPVEIGNCTRLQEIDWYGNRLSGEIPSSI 477
Query: 283 CNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQ 341
L ++L N L G I C ++ + L +N++SGSIP L L++F +
Sbjct: 478 GRLKDLTRLHLRENELVGNIPASLGNCHQMTVIDLADNQLSGSIPSSFGFLTALELFMIY 537
Query: 342 YNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI 401
N+ G +P SL N +NL N +SN GS+S + + + D++ N IP ++
Sbjct: 538 NNSLQGNLPDSLINLKNLTRINFSSNKFNGSIS-PLCGSSSYLSFDVTENGFEGDIPLEL 596
Query: 402 GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNG--------CVVVVYLLLN 453
G TN+ L+L N F G IP FG L+ LD+ N+L+G C + ++ LN
Sbjct: 597 GKSTNLDRLRLGKNQFTGRIPRTFGKISELSLLDISRNSLSGIIPVELGLCKKLTHIDLN 656
Query: 454 NNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESL 513
NN LSG IP L +L L L L N GS+P E + L+L N L GSIP+ +
Sbjct: 657 NNYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQEI 716
Query: 514 GYLSG--------NKLYGSVPTSFGNLNGLTHLDLSCNELDGIV------------GLYV 553
G L N+L G +P++ G L+ L L LS N L G + L +
Sbjct: 717 GNLQALNALNLEENQLSGPLPSTIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQSALDL 776
Query: 554 QSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS 613
N F G IP + L +LE LD S N L G +P ++ + L YLNL+ N LEG++ +
Sbjct: 777 SYNNFTGRIPSTISTLPKLESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEGKLKKQ 836
Query: 614 GICQNLSIISLTGNKDLCEKIM------GSDCQILTFGKLALVGIVVGSVLVIAIIV--- 664
+ GN LC + GS Q K ++ + S+ IA++V
Sbjct: 837 --FSRWQADAFVGNAGLCGSPLSHCNRAGSKNQRSLSPKTVVIISAISSLAAIALMVLVI 894
Query: 665 ----------FENVIGG------------------------------------------- 671
F+ V GG
Sbjct: 895 ILFFKQNHDLFKKVRGGNSAFSSNSSSSQAPLFSNGGAKSDIKWDDIMEATHYLNEEFMI 954
Query: 672 --GGFRTAFKGTMPDQKTVAVKK-LSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV 728
GG +K + + +T+AVKK L + ++ F E++TL ++H++LV+L+GYCS
Sbjct: 955 GSGGSGKVYKAELKNGETIAVKKILWKDDLMSNKSFNREVKTLGTIRHRHLVKLMGYCSS 1014
Query: 729 GEE--KLLVYEYMVNGSLDDWLR-----NRAASLDWGKRCKIAYGAARGISFLHHGFKPY 781
+ LL+YEYM NGS+ DWL + L W R KIA G A+G+ +LH+ P
Sbjct: 1015 KADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPP 1074
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLIS---DCESHVSTDTADTIGYVPSEYGQAGR 838
I+H DIK+SN+LL+ EA + DFGLA++++ D + +T A + GY+ EY + +
Sbjct: 1075 IVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLK 1134
Query: 839 ANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWV 878
A E+ D+YS G++L+E+VTGK PT F+++ ++V WV
Sbjct: 1135 ATEKSDVYSMGIVLMEIVTGKMPTEAMFDEET--DMVRWV 1172
|
Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Involved in the nuclear division phase of megagametogenesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49545|BAME1_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 315/942 (33%), Positives = 456/942 (48%), Gaps = 121/942 (12%)
Query: 17 TFTAIDEPKQERRSLVHFKNSLQNP-----QVLSGWNKTTRHCHWFGVKCRHSR--VVSL 69
TFTA P E R+L+ K SL LS W +T C W GV C SR V SL
Sbjct: 16 TFTA-SRPISEFRALLSLKTSLTGAGDDKNSPLSSWKVSTSFCTWIGVTCDVSRRHVTSL 74
Query: 70 VIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIP 129
+ +L G +SP + +L L+ L L++NL+ G + P++S+L L+ L++ N +GS P
Sbjct: 75 DLSGLNLSGTLSPDVSHLRLLQNLSLAENLISGPIPPEISSLSGLRHLNLSNNVFNGSFP 134
Query: 130 SQL--GL-----------------------LTRLETISLRSNSFTGEMPSELGDIKQLKS 164
++ GL LT+L + L N F G++P G ++
Sbjct: 135 DEISSGLVNLRVLDVYNNNLTGDLPVSVTNLTQLRHLHLGGNYFAGKIPPSYGSWPVIEY 194
Query: 165 LDFSGNGLNGTIPSRLGDLTQLQDLDLS-DNLLSGSLPVSLLKNLQSLSYLDVSNNLLSG 223
L SGN L G IP +G+LT L++L + N LP + NL L D +N L+G
Sbjct: 195 LAVSGNELVGKIPPEIGNLTTLRELYIGYYNAFEDGLPPE-IGNLSELVRFDGANCGLTG 253
Query: 224 NIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC 283
IPPEIG L+KL L+L Q+++F G +T E+G S LK + LSNN +G IP
Sbjct: 254 EIPPEIGKLQKLDTLFL-----QVNVFSGPLTWELGTLSSLKSMDLSNNMFTGEIPASFA 308
Query: 284 NSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISE-LPLKVFDLQY 342
+L +NL N L G I + L L L N +GSIP+ + E L + DL
Sbjct: 309 ELKNLTLLNLFRNKLHGEIPEFIGDLPELEVLQLWENNFTGSIPQKLGENGKLNLVDLSS 368
Query: 343 NNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIG 402
N TG +P ++ + L N L GS+ + +L ++ + N L IPK +
Sbjct: 369 NKLTGTLPPNMCSGNKLETLITLGNFLFGSIPDSLGKCESLTRIRMGENFLNGSIPKGLF 428
Query: 403 NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVV--------VVYLLLNN 454
L + ++L N+ G +P+ G ++L + L +N L+G + V LLL+
Sbjct: 429 GLPKLTQVELQDNYLSGELPVAGGVSVNLGQISLSNNQLSGPLPPAIGNFTGVQKLLLDG 488
Query: 455 NMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPES-- 512
N G IP + +L L+ ++ NL +G I PE + + L N+L+G IP
Sbjct: 489 NKFQGPIPSEVGKLQQLSKIDFSHNLFSGRIAPEISRCKLLTFVDLSRNELSGEIPNEIT 548
Query: 513 ----LGY--LSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPEL 566
L Y LS N L GS+P S ++ LT LD S N L G+V P
Sbjct: 549 AMKILNYLNLSRNHLVGSIPGSISSMQSLTSLDFSYNNLSGLV--------------PGT 594
Query: 567 GNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTG 626
G Y F N LC PYL + V + G Q+ S L+
Sbjct: 595 GQFSYFNYTSFLGN-------PDLCG-PYL-------GPCKDGVAKGG-HQSHSKGPLSA 638
Query: 627 NKDLCEKIMGSDCQILTFGKLALVGIVVGSVL-----------------------VIAII 663
+ L + C I A+V I+ L V+ +
Sbjct: 639 SMKLLLVLGLLVCSI----AFAVVAIIKARSLKKASESRAWRLTAFQRLDFTCDDVLDSL 694
Query: 664 VFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQ 721
+N+IG GG +KG MP+ VAVK+L+ + D F AE++TL ++H+++V+
Sbjct: 695 KEDNIIGKGGAGIVYKGVMPNGDLVAVKRLAAMSRGSSHDHGFNAEIQTLGRIRHRHIVR 754
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
LLG+CS E LLVYEYM NGSL + L + L W R KIA AA+G+ +LHH P
Sbjct: 755 LLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIALEAAKGLCYLHHDCSP 814
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC-ESHVSTDTADTIGYVPSEYGQAGRA 839
I+H D+K++NILL+ FEA V+DFGLA+ + D S + A + GY+ EY +
Sbjct: 815 LIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKV 874
Query: 840 NERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLM 881
+E+ D+YSFGV+LLELVTG++P G E DG ++V WV M
Sbjct: 875 DEKSDVYSFGVVLLELVTGRKPVG---EFGDGVDIVQWVRKM 913
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LHP4|RCH2_ARATH Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 317/961 (32%), Positives = 470/961 (48%), Gaps = 140/961 (14%)
Query: 47 WNK--TTRHCHWFGVKCRHSRVVSLV-IQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQ 103
WN T +W + C ++ + I++ L+ + L SL+ L +S L G
Sbjct: 61 WNSIDNTPCNNWTFITCSSQGFITDIDIESVPLQLSLPKNLPAFRSLQKLTISGANLTGT 120
Query: 104 LSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLK 163
L + + LK+L + N L G IP L L LET+ L SN TG++P ++ +LK
Sbjct: 121 LPESLGDCLGLKVLDLSSNGLVGDIPWSLSKLRNLETLILNSNQLTGKIPPDISKCSKLK 180
Query: 164 SLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNL-LSGSLPVSLLKNLQSLSYLDVSNNLLS 222
SL N L G+IP+ LG L+ L+ + + N +SG +P S + + +L+ L ++ +S
Sbjct: 181 SLILFDNLLTGSIPTELGKLSGLEVIRIGGNKEISGQIP-SEIGDCSNLTVLGLAETSVS 239
Query: 223 GNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPR-- 280
GN+P +G LKKL L + ++ G I ++GNCS L + L N LSG IPR
Sbjct: 240 GNLPSSLGKLKKLETLSI-----YTTMISGEIPSDLGNCSELVDLFLYENSLSGSIPREI 294
Query: 281 ----------------------ELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLV 318
E+ N +L I+L N+LSG+I R + L E ++
Sbjct: 295 GQLTKLEQLFLWQNSLVGGIPEEIGNCSNLKMIDLSLNLLSGSIPSSIGRLSFLEEFMIS 354
Query: 319 NNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEI 377
+N+ SGSIP IS L L N +G+IP L L F A SN LEGS+ +
Sbjct: 355 DNKFSGSIPTTISNCSSLVQLQLDKNQISGLIPSELGTLTKLTLFFAWSNQLEGSIPPGL 414
Query: 378 SNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLG 437
++ L+ LDLS N LT IP + L N+ L L SN G IP E G+C SL L LG
Sbjct: 415 ADCTDLQALDLSRNSLTGTIPSGLFMLRNLTKLLLISNSLSGFIPQEIGNCSSLVRLRLG 474
Query: 438 SNNLNGCV--------VVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEF 489
N + G + + +L ++N L GK+P + + L ++L N L GS+P
Sbjct: 475 FNRITGEIPSGIGSLKKINFLDFSSNRLHGKVPDEIGSCSELQMIDLSNNSLEGSLPNPV 534
Query: 490 GDSLKVQGLYLGHNQLTGSIPESLGY--------LSGNKLYGSVPTSFGNLNGLTHLDLS 541
+Q L + NQ +G IP SLG LS N GS+PTS G +GL LDL
Sbjct: 535 SSLSGLQVLDVSANQFSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLGMCSGLQLLDLG 594
Query: 542 CNELDG------------IVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEK 589
NEL G + L + SN+ G+IP ++ +L +L LD S NML+G +
Sbjct: 595 SNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNMLEGDL-AP 653
Query: 590 LCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMGSDCQILTFGK--- 646
L ++ L+ LN++ N G +P + + + LS L GNK LC D LT+ K
Sbjct: 654 LANIENLVSLNISYNSFSGYLPDNKLFRQLSPQDLEGNKKLCSSTQ--DSCFLTYRKGNG 711
Query: 647 ----------------------LALVGIVVGSVLV------------------------- 659
L +V +++G+V V
Sbjct: 712 LGDDGDASRTRKLRLTLALLITLTVVLMILGAVAVIRARRNIDNERDSELGETYKWQFTP 771
Query: 660 -----------IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKL---------SQATGQ 699
I +V NVIG G ++ + + + +AVKKL + T
Sbjct: 772 FQKLNFSVDQIIRCLVEPNVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKN 831
Query: 700 CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWG 758
F+AE++TL ++H+N+V+ LG C +LL+Y+YM NGSL L R +SLDW
Sbjct: 832 VRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSLDWD 891
Query: 759 KRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-SH 817
R +I GAA+G+++LHH P I+H DIK +NIL+ FE ++DFGLA+L+ + +
Sbjct: 892 LRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGR 951
Query: 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDW 877
S A + GY+ EYG + + E+ D+YS+GV++LE++TGKQP P +G +LVDW
Sbjct: 952 CSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTV--PEGIHLVDW 1009
Query: 878 V 878
V
Sbjct: 1010 V 1010
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 314/935 (33%), Positives = 448/935 (47%), Gaps = 138/935 (14%)
Query: 31 LVHFKNSLQNPQ-VLSGWNKT-TRHCHWFGVKCR--HSRVVSLVIQTQSLKGPVSPFLFN 86
L K SL +P LS WN C W GV C S V S+ + + +L GP +
Sbjct: 23 LQQVKLSLDDPDSYLSSWNSNDASPCRWSGVSCAGDFSSVTSVDLSSANLAGPFPSVICR 82
Query: 87 LSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSN 146
LS+L L L N + L ++ K L+ L + +N L+G +P L + L + L N
Sbjct: 83 LSNLAHLSLYNNSINSTLPLNIAACKSLQTLDLSQNLLTGELPQTLADIPTLVHLDLTGN 142
Query: 147 SFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLK 206
+F+G++P+ G + L+ L N L+GTIP LG+++ L+ L+LS N S S
Sbjct: 143 NFSGDIPASFGKFENLEVLSLVYNLLDGTIPPFLGNISTLKMLNLSYNPFSPSRIPPEFG 202
Query: 207 NLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKY 266
NL +L + ++ L G IP +G L KL DL L L+ VG I P +G + +
Sbjct: 203 NLTNLEVMWLTECHLVGQIPDSLGQLSKLVDLDLA-----LNDLVGHIPPSLGGLTNVVQ 257
Query: 267 ISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSI 326
I L NN L+G IP EL N SL LD +M N+++G I
Sbjct: 258 IELYNNSLTGEIPPELGNLKSLRL--LDASM----------------------NQLTGKI 293
Query: 327 PEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKL 386
P+ + +PL+ +L NN G +P S+ S NL E N L G L ++ L L
Sbjct: 294 PDELCRVPLESLNLYENNLEGELPASIALSPNLYEIRIFGNRLTGGLPKDLGLNSPLRWL 353
Query: 387 DLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVV 446
D+S N + +P + ++ L + N F G+IP DC SL + L N
Sbjct: 354 DVSENEFSGDLPADLCAKGELEELLIIHNSFSGVIPESLADCRSLTRIRLAYNR------ 407
Query: 447 VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLT 506
SG +P L ++ L L N +G I G + + L L +N+ T
Sbjct: 408 ----------FSGSVPTGFWGLPHVNLLELVNNSFSGEISKSIGGASNLSLLILSNNEFT 457
Query: 507 GSIPESLGYL--------SGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQS--- 555
GS+PE +G L SGNK GS+P S +L L LDL N+ G + ++S
Sbjct: 458 GSLPEEIGSLDNLNQLSASGNKFSGSLPDSLMSLGELGTLDLHGNQFSGELTSGIKSWKK 517
Query: 556 --------NKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLE 607
N+F G+IP E+G+L L YLD S NM G IP L SL L LNL+ NRL
Sbjct: 518 LNELNLADNEFTGKIPDEIGSLSVLNYLDLSGNMFSGKIPVSLQSLK-LNQLNLSYNRLS 576
Query: 608 GEVPRSGICQNLSIISLTGNKDLCEKI---MGSDCQILTFGKLAL---VGIVVGSVLVIA 661
G++P S + +++ S GN LC I GS+ + G + L + ++ VL+
Sbjct: 577 GDLPPS-LAKDMYKNSFIGNPGLCGDIKGLCGSENEAKKRGYVWLLRSIFVLAAMVLLAG 635
Query: 662 IIVF---------------------------------------ENVIGGGGFRTAFKGTM 682
+ F +NVIG G +K +
Sbjct: 636 VAWFYFKYRTFKKARAMERSKWTLMSFHKLGFSEHEILESLDEDNVIGAGASGKVYKVVL 695
Query: 683 PDQKTVAVKKL----SQATGQCDRE-----------FAAEMETLDMVKHQNLVQLLGYCS 727
+ +TVAVK+L + TG CD E F AE+ETL ++H+N+V+L CS
Sbjct: 696 TNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCS 755
Query: 728 VGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMD 786
+ KLLVYEYM NGSL D L ++ L W R KI AA G+S+LHH P I+H D
Sbjct: 756 TRDCKLLVYEYMPNGSLGDLLHSSKGGMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRD 815
Query: 787 IKTSNILLNDYFEAKVSDFGLAR---LISDCESHVSTDTADTIGYVPSEYGQAGRANERG 843
IK++NIL++ + A+V+DFG+A+ L +S A + GY+ EY R NE+
Sbjct: 816 IKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSV-IAGSCGYIAPEYAYTLRVNEKS 874
Query: 844 DIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWV 878
DIYSFGV++LE+VT K+P PE +KD LV WV
Sbjct: 875 DIYSFGVVILEIVTRKRPVDPELGEKD---LVKWV 906
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 885 | ||||||
| 224136952 | 1215 | predicted protein [Populus trichocarpa] | 0.986 | 0.718 | 0.457 | 0.0 | |
| 147816099 | 1147 | hypothetical protein VITISV_015708 [Viti | 0.880 | 0.679 | 0.485 | 0.0 | |
| 23304947 | 1192 | extra sporogenous cells [Arabidopsis tha | 0.962 | 0.714 | 0.421 | 0.0 | |
| 15240747 | 1192 | leucine-rich repeat receptor protein kin | 0.962 | 0.714 | 0.420 | 0.0 | |
| 168043326 | 1213 | predicted protein [Physcomitrella patens | 0.906 | 0.661 | 0.403 | 1e-178 | |
| 224120068 | 1237 | predicted protein [Populus trichocarpa] | 0.748 | 0.535 | 0.440 | 1e-172 | |
| 168017662 | 1199 | predicted protein [Physcomitrella patens | 0.907 | 0.669 | 0.387 | 1e-171 | |
| 302788101 | 1339 | hypothetical protein SELMODRAFT_103725 [ | 0.915 | 0.604 | 0.384 | 1e-168 | |
| 255539505 | 1303 | leucine-rich repeat receptor protein kin | 0.748 | 0.508 | 0.411 | 1e-165 | |
| 168023746 | 1247 | CLL4A clavata1-like receptor S/T protein | 0.986 | 0.700 | 0.373 | 1e-164 |
| >gi|224136952|ref|XP_002322457.1| predicted protein [Populus trichocarpa] gi|222869453|gb|EEF06584.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/1162 (45%), Positives = 655/1162 (56%), Gaps = 289/1162 (24%)
Query: 9 MVFSLSFGTFTAIDEP-----------KQERRSLVHFKNSLQNPQVLSGWNKTTRHCHWF 57
M F L F F + +P +R SL+ FKN+L+NP++LS WN T+RHC W
Sbjct: 3 MSFKLVFFCFLVLTKPLILVSKYTEDQNTDRESLISFKNALRNPKILSSWNITSRHCSWV 62
Query: 58 GVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKML 117
GV C RVVSL++ TQSL+G + P LF+LSSL ILDLS NL G++ QVSNLKRLK L
Sbjct: 63 GVSCHLGRVVSLILSTQSLRGRLHPSLFSLSSLTILDLSYNLFVGEIPHQVSNLKRLKHL 122
Query: 118 SVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQL--------------- 162
S+G N LSG +P +LG+LTRL+T+ L NSFTG++P E+G + QL
Sbjct: 123 SLGGNLLSGELPRELGVLTRLQTLQLGPNSFTGKIPPEVGKLSQLNTLDLSSNGLTGSVP 182
Query: 163 ---------------KSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSL--- 204
KSLD S N +G IP +G+L L DL + NL SG P +
Sbjct: 183 SQLSSPVNLFKLESLKSLDISNNSFSGPIPPEIGNLKNLSDLYIGINLFSGPFPPEIGDL 242
Query: 205 --------------------LKNLQSLSYLDVSNNLL----------------------- 221
+ NL+SL+ LD+S N L
Sbjct: 243 SRLENFFAPSCSITGPFPEEISNLKSLNKLDLSYNPLRCSIPKSVGAMESLSILNLVYSE 302
Query: 222 -SGNIPPEIGNLKKLSDLYL------GIGPYQLSL------------------------- 249
+G+IP E+GN K L + L G+ P +LS+
Sbjct: 303 LNGSIPAELGNCKNLKTVMLSFNSLSGVLPEELSMLPMLTFSADKNQLSGPLPHWLGKWN 362
Query: 250 -----------FVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNML 298
F G+I PEIGNCS L+ ISLS+N LSG IPRELC + L+EI+LD N L
Sbjct: 363 QVESLLLSNNRFSGKIPPEIGNCSALRVISLSSNLLSGEIPRELCKAVDLMEIDLDVNFL 422
Query: 299 SGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSEN 358
+G IEDVF +CTNLS+LVL++N+I GSIPEY++ LPL V DL NNFTG IPVSLWNS
Sbjct: 423 TGGIEDVFLKCTNLSQLVLMDNQIDGSIPEYLAGLPLTVLDLDSNNFTGTIPVSLWNSMT 482
Query: 359 LMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFD 418
LMEF+AA+NLLEGSL EI NAV LE+L LS+N L IPK+IGNLT + +L LNSN +
Sbjct: 483 LMEFSAANNLLEGSLPVEIGNAVQLERLVLSNNQLGGTIPKEIGNLTALSVLNLNSNLLE 542
Query: 419 GII------------------------PMEFGDCISLNTLDLGSNNLNGCV--------- 445
G I P + D + L+ L L N L+G +
Sbjct: 543 GTIPVELGHSAALTTLDLGNNQLSGSIPEKLADLVQLHCLVLSHNKLSGPIPSEPSLYFR 602
Query: 446 -----------------------------------VVVYLLLNNNMLSGKIPGSLSRLTN 470
VVV LLLNNN LSG+IPGSLSRLTN
Sbjct: 603 EASIPDSSFFQHLGVFDLSHNMLSGSIPEEMGNLMVVVDLLLNNNKLSGEIPGSLSRLTN 662
Query: 471 LTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL--------SGNKLY 522
LTTL+L GN+LTGSIPPE GDS K+QGLYLG+NQL+G+IP LG L +GN+LY
Sbjct: 663 LTTLDLSGNMLTGSIPPELGDSSKLQGLYLGNNQLSGTIPGRLGVLGSLVKLNLTGNQLY 722
Query: 523 GSVPTSFGNLNGLTHLDLSCNELDG-----------IVGLY-----------VQSNKFYG 560
G VP SFG+L LTHLDLS NELDG +VGLY V N+ G
Sbjct: 723 GPVPRSFGDLKELTHLDLSYNELDGELPSSLSGMLNLVGLYLGNLVQLAYFDVSGNRISG 782
Query: 561 EIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNR-LEGEV--------- 610
+IP +L LV L YL+ + N L+G +P L L ++LA N+ L G++
Sbjct: 783 QIPEKLCALVNLFYLNLAENSLEGPVPGSGICL-NLSKISLAGNKDLCGKIMGLDCRIKS 841
Query: 611 ----------PRSGICQNLSIISLT-------------GNKDLCEKIMGSDC-QILTFGK 646
+GI I++L+ G DL E+ + S Q L F
Sbjct: 842 FDKSYYLNAWGLAGIAVGCMIVTLSIAFALRKWILKDSGQGDLDERKLNSFLDQNLYF-- 899
Query: 647 LALVGIVVGSVLVIAIIVFE---------------------NVIGGGGFRTAFKGTMPDQ 685
L+ L I I +FE N+IG GGF T +K T+PD
Sbjct: 900 LSSSSSRSKEPLSINIAMFEQPLLKITLVDILEATNNFCKTNIIGDGGFGTVYKATLPDV 959
Query: 686 KTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLD 745
KTVAVKKLSQA Q +REF AEMETL VKHQNLV LLGYCS GEEKLLVYEYMVNGSLD
Sbjct: 960 KTVAVKKLSQAKTQGNREFIAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLD 1019
Query: 746 DWLRNRAASLD---WGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKV 802
WLRN++ +LD W KR KIA GAARG++FLHHGF P+IIH DIK SNILLN+ FE KV
Sbjct: 1020 LWLRNQSRALDVLDWPKRVKIATGAARGLAFLHHGFTPHIIHRDIKASNILLNEDFEPKV 1079
Query: 803 SDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPT 862
+DFGLARLIS CE+HVSTD A T GY+P EYGQ+GR+ RGD+YSFGVILLELVTGK+PT
Sbjct: 1080 ADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPT 1139
Query: 863 GPEFEDKDGGNLVDWVLLMMKK 884
GP+F++ +GGNLV WV +KK
Sbjct: 1140 GPDFKEVEGGNLVGWVFQKIKK 1161
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147816099|emb|CAN61953.1| hypothetical protein VITISV_015708 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/923 (48%), Positives = 550/923 (59%), Gaps = 144/923 (15%)
Query: 76 LKGPVSPFLF-NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGL 134
L GP+SP LF NL SL LD+S N G + P++ NLK L L +G N SG +P ++G
Sbjct: 201 LSGPLSPTLFTNLQSLISLDVSNNSFSGNIPPEIGNLKSLTDLYIGINHFSGQLPPEIGN 260
Query: 135 LTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194
L+ L+ S S G +P ++ ++K L LD S N L +IP +G L L L+
Sbjct: 261 LSSLQNFFSPSCSIRGPLPEQISELKSLNKLDLSYNPLKCSIPKSIGKLQNLTILNFVYA 320
Query: 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLS----------------DL 238
L+GS+P L K ++L L +S N +SG++P E+ L LS
Sbjct: 321 ELNGSIPAELGK-CRNLKTLMLSFNSISGSLPEELSELPMLSFSAEKNQLSGPLPSWLGK 379
Query: 239 YLGIGPYQLS--LFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGN 296
+ GI LS F GRI PEIGNCSML ++SLSNN LSG IP+ELCN+ SL+EI+LD N
Sbjct: 380 WNGIDSLLLSSNRFSGRIPPEIGNCSMLNHVSLSNNLLSGSIPKELCNAESLMEIDLDSN 439
Query: 297 MLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNS 356
LSG I+D F +C NL++LVLVNN+I GSIPEY+SELPL V DL NNFTG IPVSLWN
Sbjct: 440 FLSGGIDDTFLKCKNLTQLVLVNNQIVGSIPEYLSELPLMVLDLDSNNFTGSIPVSLWNL 499
Query: 357 ENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQI------- 409
+LMEF+AA+NLLEGSL EI NAVALE+L LS+N L IP++IGNLT++ +
Sbjct: 500 VSLMEFSAANNLLEGSLPPEIGNAVALERLVLSNNRLKGTIPREIGNLTSLSVLNLNLNL 559
Query: 410 -----------------LKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNG--------- 443
L L +N +G IP D L L L N+L+G
Sbjct: 560 LEGIIPMELGDCISLTTLDLGNNLLNGSIPDRIADLAQLQCLVLSHNDLSGSIPSKPSSY 619
Query: 444 -----------------------------------CVVVVYLLLNNNMLSGKIPGSLSRL 468
CVVVV LLL+NN LSG+IP SLSRL
Sbjct: 620 FRQVNIPDSSFVQHHGVYDLSYNRLSGSIPEELGSCVVVVDLLLSNNFLSGEIPISLSRL 679
Query: 469 TNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLS--------GNK 520
TNLTTL+L GNLLTGSIP + G SLK+QGLYLG+NQLTG+IPESLG LS GN+
Sbjct: 680 TNLTTLDLSGNLLTGSIPLKLGYSLKLQGLYLGNNQLTGTIPESLGRLSSLVKLNLTGNQ 739
Query: 521 LYGSVPTSFGNLNGLTHLDLSCNELDG-----------IVGLYVQSNKFYGEIPPELGNL 569
L GS+P SFGNL GLTH DLS NELDG +VGLYVQ N+ G++ N
Sbjct: 740 LSGSIPFSFGNLTGLTHFDLSSNELDGELPSALSSMVNLVGLYVQQNRLSGQVSKLFMNS 799
Query: 570 V--QLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GICQNLSI--ISL 624
+ ++E L+ S N +G +P L +L YL L+L N GE+P G L +S
Sbjct: 800 IAWRIETLNLSWNFFNGGLPRSLGNLSYLTNLDLHHNMFTGEIPTELGDLMQLEYFDVSA 859
Query: 625 TGNKDLCEKIMGSDCQILTFGKLALVGIVVGSVLVIAIIVFENVIGGGGFRTAFKGTMPD 684
+ L + Q L KL LV I+ + NVIG GGF T +K +P+
Sbjct: 860 ADQRSLLASYVAMFEQPLL--KLTLVDILEAT----NNFCKTNVIGDGGFGTVYKAALPN 913
Query: 685 QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSL 744
K VAVKKL+QA Q REF AEMETL VYEYMVNGSL
Sbjct: 914 GKIVAVKKLNQAKTQGHREFLAEMETL-----------------------VYEYMVNGSL 950
Query: 745 DDWLRNRAASL---DWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAK 801
D WLRNR +L DW KR KIA GAARG++FLHHGF P+IIH DIK SNILLN+ FEAK
Sbjct: 951 DLWLRNRTGALEALDWTKRFKIAMGAARGLAFLHHGFIPHIIHRDIKASNILLNEDFEAK 1010
Query: 802 VSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
V+DFGLARLIS CE+HVSTD A T GY+P EYGQ+ R+ RGD+YSFGVILLELVTGK+P
Sbjct: 1011 VADFGLARLISACETHVSTDIAGTFGYIPPEYGQSWRSTTRGDVYSFGVILLELVTGKEP 1070
Query: 862 TGPEFEDKDGGNLVDWVLLMMKK 884
TGP+F+D +GGNLV WV M+K
Sbjct: 1071 TGPDFKDFEGGNLVGWVFEKMRK 1093
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|23304947|emb|CAD42912.1| extra sporogenous cells [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/1112 (42%), Positives = 581/1112 (52%), Gaps = 260/1112 (23%)
Query: 27 ERRSLVHFKNSLQNPQVLSGWNKTTR--HCHWFGVKCRHSRV------------------ 66
E SL+ FK SL+NP +LS WN ++ HC W GV C RV
Sbjct: 26 ETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTCLLGRVNSLSLPSLSLRGQIPKEI 85
Query: 67 ------VSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRL------ 114
L + G + P ++NL L+ LDLS N L G L ++S L L
Sbjct: 86 SSLKNLRELCLAGNQFSGKIPPEIWNLKHLQTLDLSGNSLTGLLPSRLSELPELLYLDLS 145
Query: 115 -------------------KMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSE 155
L V N LSG IP ++G L+ L + + NSF+G++PSE
Sbjct: 146 DNHFSGSLPLSFFISLPALSSLDVSNNSLSGEIPPEIGKLSNLSNLYMGLNSFSGQIPSE 205
Query: 156 LGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLD 215
+G+ LK+ NG +P + L L LDLS N L S+P S LQ+LS L+
Sbjct: 206 IGNTSLLKNFAAPSCFFNGPLPKEISKLKHLAKLDLSYNPLKCSIPKSF-GELQNLSILN 264
Query: 216 VSNNLLSGNIPPEIGNLKKLSDLYLGI----GPYQLSL---------------------- 249
+ + L G+IPPE+GN K L L L GP L L
Sbjct: 265 LVSAELIGSIPPELGNCKSLKSLMLSFNSLSGPLPLELSEIPLLTFSAERNQLSGSLPSW 324
Query: 250 ----------------FVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINL 293
F G I EI +C MLK++SL++N LSG IPRELC SGSL I+L
Sbjct: 325 IGKWKVLDSLLLANNRFSGEIPREIEDCPMLKHLSLASNLLSGSIPRELCGSGSLEAIDL 384
Query: 294 DGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSL 353
GN+LSGTIE+VFD C++L EL+L NN+I+GSIPE + +LPL DL NNFTG IP SL
Sbjct: 385 SGNLLSGTIEEVFDGCSSLGELLLTNNQINGSIPEDLWKLPLMALDLDSNNFTGEIPKSL 444
Query: 354 WNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLN 413
W S NLMEF A+ N LEG L EI NA +L++L LS N LT +IP++IG LT++ +L LN
Sbjct: 445 WKSTNLMEFTASYNRLEGYLPAEIGNAASLKRLVLSDNQLTGEIPREIGKLTSLSVLNLN 504
Query: 414 SNFFD------------------------GIIPMEFGDCISLNTLDLGSNNLNG------ 443
+N F G IP + L L L NNL+G
Sbjct: 505 ANMFQGKIPVELGDCTSLTTLDLGSNNLQGQIPDKITALAQLQCLVLSYNNLSGSIPSKP 564
Query: 444 --------------------------------------CVVVVYLLLNNNMLSGKIPGSL 465
C+V+V + L+NN LSG+IP SL
Sbjct: 565 SAYFHQIDMPDLSFLQHHGIFDLSYNRLSGPIPEELGECLVLVEISLSNNHLSGEIPASL 624
Query: 466 SRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL--------S 517
SRLTNLT L+L GN LTGSIP E G+SLK+QGL L +NQL G IPES G L +
Sbjct: 625 SRLTNLTILDLSGNALTGSIPKEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLNLT 684
Query: 518 GNKLYGSVPTSFGNLNGLTHLDLSCNELDG-----------IVGLYVQSNKFYGEIPPEL 566
NKL G VP S GNL LTH+DLS N L G +VGLY++ NKF GEIP EL
Sbjct: 685 KNKLDGPVPASLGNLKELTHMDLSFNNLSGELSSELSTMEKLVGLYIEQNKFTGEIPSEL 744
Query: 567 GNLVQLEY------------------------LDFSMNMLDGHIP-EKLCSLPYLLYLNL 601
GNL QLEY L+ + N L G +P + +C P L+
Sbjct: 745 GNLTQLEYLDVSENLLSGEIPTKICGLPNLEFLNLAKNNLRGEVPSDGVCQDPSKALLSG 804
Query: 602 ----------ADNRLEGEVPRS-----GICQNLSIISLT--------------GNKDLCE 632
+D ++EG RS G+ +II +D E
Sbjct: 805 NKELCGRVVGSDCKIEGTKLRSAWGIAGLMLGFTIIVFVFVFSLRRWVMTKRVKQRDDPE 864
Query: 633 KIMGSDCQILTFGKLA-LVGIVVGSVLVIAIIVFE---------------------NVIG 670
+I S + L L G L I I +FE N+IG
Sbjct: 865 RIEESRLKGFVDQNLYFLSGSRSREPLSINIAMFEQPLLKVRLGDIVEATDHFSKKNIIG 924
Query: 671 GGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730
GGF T +K +P +KTVAVKKLS+A Q +REF AEMETL VKH NLV LLGYCS E
Sbjct: 925 DGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSE 984
Query: 731 EKLLVYEYMVNGSLDDWLRNRAASL---DWGKRCKIAYGAARGISFLHHGFKPYIIHMDI 787
EKLLVYEYMVNGSLD WLRN+ L DW KR KIA GAARG++FLHHGF P+IIH DI
Sbjct: 985 EKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDI 1044
Query: 788 KTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYS 847
K SNILL+ FE KV+DFGLARLIS CESH+ST A T GY+P EYGQ+ RA +GD+YS
Sbjct: 1045 KASNILLDGDFEPKVADFGLARLISACESHISTVIAGTFGYIPPEYGQSARATTKGDVYS 1104
Query: 848 FGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
FGVILLELVTGK+PTGP+F++ +GGNLV W +
Sbjct: 1105 FGVILLELVTGKEPTGPDFKESEGGNLVGWAI 1136
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15240747|ref|NP_196345.1| leucine-rich repeat receptor protein kinase EXS [Arabidopsis thaliana] gi|30913045|sp|Q9LYN8.1|EXS_ARATH RecName: Full=Leucine-rich repeat receptor protein kinase EXS; AltName: Full=Extra sporogenous cells protein; AltName: Full=Protein EXCESS MICROSPOROCYTES 1; Flags: Precursor gi|7546706|emb|CAB87284.1| receptor-like protein kinase-like protein [Arabidopsis thaliana] gi|22138765|emb|CAD32463.1| receptor-like protein kinase-like protein [Arabidopsis thaliana] gi|224589665|gb|ACN59364.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gi|332003749|gb|AED91132.1| leucine-rich repeat receptor protein kinase EXS [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/1112 (42%), Positives = 580/1112 (52%), Gaps = 260/1112 (23%)
Query: 27 ERRSLVHFKNSLQNPQVLSGWNKTTR--HCHWFGVKCRHSRV------------------ 66
E SL+ FK SL+NP +LS WN ++ HC W GV C RV
Sbjct: 26 ETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTCLLGRVNSLSLPSLSLRGQIPKEI 85
Query: 67 ------VSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRL------ 114
L + G + P ++NL L+ LDLS N L G L +S L +L
Sbjct: 86 SSLKNLRELCLAGNQFSGKIPPEIWNLKHLQTLDLSGNSLTGLLPRLLSELPQLLYLDLS 145
Query: 115 -------------------KMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSE 155
L V N LSG IP ++G L+ L + + NSF+G++PSE
Sbjct: 146 DNHFSGSLPPSFFISLPALSSLDVSNNSLSGEIPPEIGKLSNLSNLYMGLNSFSGQIPSE 205
Query: 156 LGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLD 215
+G+I LK+ NG +P + L L LDLS N L S+P S L +LS L+
Sbjct: 206 IGNISLLKNFAAPSCFFNGPLPKEISKLKHLAKLDLSYNPLKCSIPKSF-GELHNLSILN 264
Query: 216 VSNNLLSGNIPPEIGNLKKLSDLYLGI----GPYQLSL---------------------- 249
+ + L G IPPE+GN K L L L GP L L
Sbjct: 265 LVSAELIGLIPPELGNCKSLKSLMLSFNSLSGPLPLELSEIPLLTFSAERNQLSGSLPSW 324
Query: 250 ----------------FVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINL 293
F G I EI +C MLK++SL++N LSG IPRELC SGSL I+L
Sbjct: 325 MGKWKVLDSLLLANNRFSGEIPHEIEDCPMLKHLSLASNLLSGSIPRELCGSGSLEAIDL 384
Query: 294 DGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSL 353
GN+LSGTIE+VFD C++L EL+L NN+I+GSIPE + +LPL DL NNFTG IP SL
Sbjct: 385 SGNLLSGTIEEVFDGCSSLGELLLTNNQINGSIPEDLWKLPLMALDLDSNNFTGEIPKSL 444
Query: 354 WNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLN 413
W S NLMEF A+ N LEG L EI NA +L++L LS N LT +IP++IG LT++ +L LN
Sbjct: 445 WKSTNLMEFTASYNRLEGYLPAEIGNAASLKRLVLSDNQLTGEIPREIGKLTSLSVLNLN 504
Query: 414 SNFFD------------------------GIIPMEFGDCISLNTLDLGSNNLNG------ 443
+N F G IP + L L L NNL+G
Sbjct: 505 ANMFQGKIPVELGDCTSLTTLDLGSNNLQGQIPDKITALAQLQCLVLSYNNLSGSIPSKP 564
Query: 444 --------------------------------------CVVVVYLLLNNNMLSGKIPGSL 465
C+V+V + L+NN LSG+IP SL
Sbjct: 565 SAYFHQIEMPDLSFLQHHGIFDLSYNRLSGPIPEELGECLVLVEISLSNNHLSGEIPASL 624
Query: 466 SRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL--------S 517
SRLTNLT L+L GN LTGSIP E G+SLK+QGL L +NQL G IPES G L +
Sbjct: 625 SRLTNLTILDLSGNALTGSIPKEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLNLT 684
Query: 518 GNKLYGSVPTSFGNLNGLTHLDLSCNELDG-----------IVGLYVQSNKFYGEIPPEL 566
NKL G VP S GNL LTH+DLS N L G +VGLY++ NKF GEIP EL
Sbjct: 685 KNKLDGPVPASLGNLKELTHMDLSFNNLSGELSSELSTMEKLVGLYIEQNKFTGEIPSEL 744
Query: 567 GNLVQLE------------------------YLDFSMNMLDGHIP-EKLCSLPYLLYLNL 601
GNL QLE +L+ + N L G +P + +C P L+
Sbjct: 745 GNLTQLEYLDVSENLLSGEIPTKICGLPNLEFLNLAKNNLRGEVPSDGVCQDPSKALLSG 804
Query: 602 ----------ADNRLEGEVPRS-----GICQNLSIISLT--------------GNKDLCE 632
+D ++EG RS G+ +II +D E
Sbjct: 805 NKELCGRVVGSDCKIEGTKLRSAWGIAGLMLGFTIIVFVFVFSLRRWAMTKRVKQRDDPE 864
Query: 633 KIMGSDCQILTFGKLA-LVGIVVGSVLVIAIIVFE---------------------NVIG 670
++ S + L L G L I I +FE N+IG
Sbjct: 865 RMEESRLKGFVDQNLYFLSGSRSREPLSINIAMFEQPLLKVRLGDIVEATDHFSKKNIIG 924
Query: 671 GGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730
GGF T +K +P +KTVAVKKLS+A Q +REF AEMETL VKH NLV LLGYCS E
Sbjct: 925 DGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSE 984
Query: 731 EKLLVYEYMVNGSLDDWLRNRAASL---DWGKRCKIAYGAARGISFLHHGFKPYIIHMDI 787
EKLLVYEYMVNGSLD WLRN+ L DW KR KIA GAARG++FLHHGF P+IIH DI
Sbjct: 985 EKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDI 1044
Query: 788 KTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYS 847
K SNILL+ FE KV+DFGLARLIS CESHVST A T GY+P EYGQ+ RA +GD+YS
Sbjct: 1045 KASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYS 1104
Query: 848 FGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
FGVILLELVTGK+PTGP+F++ +GGNLV W +
Sbjct: 1105 FGVILLELVTGKEPTGPDFKESEGGNLVGWAI 1136
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|168043326|ref|XP_001774136.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674543|gb|EDQ61050.1| predicted protein [Physcomitrella patens subsp. patens] | Back alignment and taxonomy information |
|---|
Score = 633 bits (1632), Expect = e-178, Method: Compositional matrix adjust.
Identities = 405/1004 (40%), Positives = 543/1004 (54%), Gaps = 202/1004 (20%)
Query: 76 LKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGEN------------- 122
G +SP L +L +L+ LDLS N L G + ++ + L LS+G N
Sbjct: 152 FSGSISPLLASLKNLQALDLSNNSLSGTIPTEIWGMTSLVELSLGSNTALNGSIPKDISK 211
Query: 123 ------------QLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170
+L G IP ++ +L + L N F+G MP+ +G++K+L +L+
Sbjct: 212 LVNLTNLFLGGSKLGGPIPQEITQCAKLVKLDLGGNKFSGPMPTSIGNLKRLVTLNLPST 271
Query: 171 GLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIG 230
GL G IP+ +G LQ LDL+ N L+GS P L LQ+L L + N LSG + P +G
Sbjct: 272 GLVGPIPASIGQCANLQVLDLAFNELTGSPPEELAA-LQNLRSLSLEGNKLSGPLGPWVG 330
Query: 231 NLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVE 290
L+ +S L L + F G I IGNCS L+ + L +N+LSGPIP ELCN+ L
Sbjct: 331 KLQNMSTLLLST-----NQFNGSIPASIGNCSKLRSLGLDDNQLSGPIPLELCNAPVLDV 385
Query: 291 INLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVI 349
+ L N+L+GTI + F RC +++L L +N ++GSIP Y++ELP L + L N F+G +
Sbjct: 386 VTLSKNLLTGTITETFRRCLAMTQLDLTSNHLTGSIPAYLAELPNLIMLSLGANQFSGPV 445
Query: 350 PVSLWNSENLME------------------------------------------------ 361
P SLW+S+ ++E
Sbjct: 446 PDSLWSSKTILELQLESNNLSGGLSPLIGNSASLMYLVLDNNNLEGPIPPEIGKLSTLMI 505
Query: 362 FNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGII 421
F+A N L GS+ E+ N L L+L +N LT +IP +IGNL N+ L L+ N G I
Sbjct: 506 FSAHGNSLSGSIPLELCNCSQLTTLNLGNNSLTGEIPHQIGNLVNLDYLVLSHNNLTGEI 565
Query: 422 PMEFGDCISLNT------------LDLGSNNLNG--------CVVVVYLLLNNNMLSGKI 461
P E + + T LDL N+L G C V+V L+L N SG +
Sbjct: 566 PDEICNDFQVTTIPVSTFLQHRGTLDLSWNDLTGSIPPQLGDCKVLVDLILAGNRFSGPL 625
Query: 462 PGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL----- 516
P L +L NLT+L++ GN L+G+IP + G+S +QG+ L NQ +G IP LG +
Sbjct: 626 PPELGKLANLTSLDVSGNQLSGNIPAQLGESRTLQGINLAFNQFSGEIPAELGNIVSLVK 685
Query: 517 ---SGNKLYGSVPTSFGNLNGLTHLD---LSCNELDG----IVG-------LYVQSNKFY 559
SGN+L GS+P + GNL L+HLD LS N+L G +VG L + +N F
Sbjct: 686 LNQSGNRLTGSLPAALGNLTSLSHLDSLNLSWNQLSGEIPALVGNLSGLAVLDLSNNHFS 745
Query: 560 GEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNL 619
GEIP E+G+ QL YLD S N L G P K+C+L + LN+++NRL G +P +G CQ+L
Sbjct: 746 GEIPAEVGDFYQLSYLDLSNNELKGEFPSKICNLRSIELLNVSNNRLVGCIPNTGSCQSL 805
Query: 620 SIISLTGNKDLCEKIM-----------GSD-------------CQILTFG---------- 645
+ S GN LC +++ SD C +LTF
Sbjct: 806 TPSSFLGNAGLCGEVLNTRCAPEASGRASDHVSRAALLGIVLACTLLTFAVIFWVLRYWI 865
Query: 646 -------------KLALVGIVVGSV---------LVIAIIVFE----------------- 666
KL +V SV L I I +FE
Sbjct: 866 QRRANALKDIEKIKLNMVLDADSSVTSTGKSKEPLSINIAMFERPLLRLTLADILQATNN 925
Query: 667 ----NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
N+IG GGF T +K +PD + VA+KKL +T Q REF AEMETL VKH NLVQL
Sbjct: 926 FCKTNIIGDGGFGTVYKAVLPDGRIVAIKKLGASTTQGTREFLAEMETLGKVKHPNLVQL 985
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASL---DWGKRCKIAYGAARGISFLHHGFK 779
LGYCS GEEKLLVYEYMVNGSLD WLRNRA +L DW KR IA G+ARG++FLHHGF
Sbjct: 986 LGYCSFGEEKLLVYEYMVNGSLDLWLRNRADALEKLDWSKRFNIAMGSARGLAFLHHGFI 1045
Query: 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA 839
P+IIH DIK SNILL++ F+ +V+DFGLARLIS ++HVSTD A T GY+P EYGQ GR+
Sbjct: 1046 PHIIHRDIKASNILLDENFDPRVADFGLARLISAYDTHVSTDIAGTFGYIPPEYGQCGRS 1105
Query: 840 NERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMK 883
+ RGD+YS+G+ILLEL+TGK+PTG E+E GGNLV V M+K
Sbjct: 1106 STRGDVYSYGIILLELLTGKEPTGKEYETMQGGNLVGCVRQMIK 1149
|
Source: Physcomitrella patens subsp. patens Species: Physcomitrella patens Genus: Physcomitrella Family: Funariaceae Order: Funariales Class: Bryopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120068|ref|XP_002318234.1| predicted protein [Populus trichocarpa] gi|222858907|gb|EEE96454.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 389/883 (44%), Positives = 492/883 (55%), Gaps = 221/883 (25%)
Query: 4 LLLCLMVFSLSFGTFTAIDEPKQ-ERRSLVHFKNSLQNPQVLSGWNKTTRHCHWFGVKCR 62
+ CL+V + S + E + +R+SL+ FKN+L+ P+VLS WN T+ HC W GV C+
Sbjct: 8 VFFCLLVLTQSLVLVSKYTEDQNTDRKSLISFKNALKTPKVLSSWNTTSHHCSWVGVSCQ 67
Query: 63 HSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGEN 122
RVVSL++ Q L+GP+ LF+LSSL + DLS NLLFG++ Q+SNLKRLK LS+G+N
Sbjct: 68 LGRVVSLILSAQGLEGPLYSSLFDLSSLTVFDLSYNLLFGEVPHQISNLKRLKHLSLGDN 127
Query: 123 QLSGSIPSQ------------------------LGLLTRLETISLRSNSFTGEMPSELGD 158
LSG +PS+ LG L++L T+ L SN FTG +P++LG
Sbjct: 128 LLSGELPSELGLLTQLQTLQLGPNSFAGKIPPELGRLSQLNTLDLSSNGFTGSVPNQLGS 187
Query: 159 ------IKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSL-------- 204
++ L SLD S N +G IP +G+L L DL + NL SG LP +
Sbjct: 188 PVTLFKLESLTSLDISNNSFSGPIPPEIGNLKNLSDLYIGVNLFSGPLPPQIGDLSRLVN 247
Query: 205 ---------------LKNLQSLSYLDVSNNLL------------------------SGNI 225
+ NL+SLS LD+S N L +G+I
Sbjct: 248 FFAPSCAITGPLPEEISNLKSLSKLDLSYNPLKCSIPKSVGKMESLSILYLVYSELNGSI 307
Query: 226 PPEIGNLKKLSDLYL------GIGPYQLSL------------------------------ 249
P E+GN K L L L G+ P +LS+
Sbjct: 308 PAELGNCKNLKTLMLSFNSLSGVLPEELSMLPMLTFSADKNQLSGPLPAWLGKWNQVESL 367
Query: 250 ------FVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE 303
F G+I E+GNC+ L+ ISLS+N LSG IPRELCN L+EI+LDGN L+G IE
Sbjct: 368 LLSNNRFTGKIPAEVGNCTALRVISLSSNMLSGEIPRELCNPVELMEIDLDGNFLAGDIE 427
Query: 304 DVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFN 363
DVF +CTNLS+LVL+NN+I+GSIPEY++ELPL V DL NNF+G IP+SLWNS NLMEF+
Sbjct: 428 DVFLKCTNLSQLVLMNNQINGSIPEYLAELPLMVLDLDSNNFSGTIPLSLWNSLNLMEFS 487
Query: 364 AASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPM 423
AA+N LEGSL EI NAV LE+L LS+N L IPK+IGNLT + +L LNSN F+G IP+
Sbjct: 488 AANNFLEGSLPAEIGNAVQLERLVLSNNQLGGTIPKEIGNLTALSVLNLNSNLFEGNIPV 547
Query: 424 ------------------------EFGDCISLNTLDLGSNNLNGCV-------------- 445
+ D + L+ L L N L+G +
Sbjct: 548 ELGHSVALTTLDLGNNQLCGSIPEKLADLVQLHCLVLSHNKLSGSIPSKPSLYFREASIP 607
Query: 446 ------------------------------VVVYLLLNNNMLSGKIPGSLSRLTNLTTLN 475
VV LLLNNN L+G++PGSLSRLTNLTTL+
Sbjct: 608 DSSFFQHLGVFDLSHNMLSGSIPEEMGNLMFVVDLLLNNNKLAGEMPGSLSRLTNLTTLD 667
Query: 476 LFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL--------SGNKLYGSVPT 527
L GN+LTGSIPPE DS K+QGLYLG+NQLTG+IP LG L +GN+L+G VP
Sbjct: 668 LSGNMLTGSIPPELVDSSKLQGLYLGNNQLTGTIPGRLGVLCSLVKLNLTGNQLHGPVPR 727
Query: 528 SFGNLNGLTHLDLSCNELDG-----------IVGLYVQSNKFYGE--------IPPELGN 568
S G+L LTHLDLS NELDG +VGLYVQ N+ G +P ELGN
Sbjct: 728 SLGDLKALTHLDLSYNELDGELPSSVSQMLNLVGLYVQQNRLSGPLDELLSRTVPVELGN 787
Query: 569 LVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNK 628
L+QLEY D S N L G IPE +C L L YLNLA+N LEG VPRSGIC NLS ISL GNK
Sbjct: 788 LMQLEYFDVSGNRLSGKIPENICVLVNLFYLNLAENSLEGPVPRSGICLNLSKISLAGNK 847
Query: 629 DLCEKIMGSDCQILTFGK------LALVGIVVGSVLVIAIIVF 665
DLC +I+G DC+I +F K L GI VG ++V F
Sbjct: 848 DLCGRILGLDCRIKSFNKSYFLNAWGLAGIAVGCMIVALSTAF 890
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|168017662|ref|XP_001761366.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687372|gb|EDQ73755.1| predicted protein [Physcomitrella patens subsp. patens] | Back alignment and taxonomy information |
|---|
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 389/1003 (38%), Positives = 542/1003 (54%), Gaps = 200/1003 (19%)
Query: 76 LKGPVSPFLFNLSSLRILDLSKNLLFGQ-------------------------LSPQVSN 110
GP+SP + LSS+ LDLS NLL G + P + N
Sbjct: 146 FSGPISPLVSALSSVVHLDLSNNLLTGTVPAKIWTITGLVELDIGGNTALTGTIPPAIGN 205
Query: 111 LKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170
L L+ L +G ++ G IP++L T LE + L N F+G++P LG ++ L +L+
Sbjct: 206 LVNLRSLYMGNSRFEGPIPAELSKCTALEKLDLGGNEFSGKIPESLGQLRNLVTLNLPAV 265
Query: 171 GLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIG 230
G+NG+IP+ L + T+L+ LD++ N LSG+LP SL LQ + V N L+G IP +
Sbjct: 266 GINGSIPASLANCTKLKVLDIAFNELSGTLPDSLAA-LQDIISFSVEGNKLTGLIPSWLC 324
Query: 231 NLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVE 290
N + ++ + L +LF G I PE+G C +++I++ +N L+G IP ELCN+ +L +
Sbjct: 325 NWRNVTTILL-----SNNLFTGSIPPELGTCPNVRHIAIDDNLLTGSIPPELCNAPNLDK 379
Query: 291 INLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVI 349
I L+ N LSG++++ F CT +E+ L N++SG +P Y++ LP L + L N+ TGV+
Sbjct: 380 ITLNDNQLSGSLDNTFLNCTQTTEIDLTANKLSGEVPAYLATLPKLMILSLGENDLTGVL 439
Query: 350 PVSLWNSENLME------------------------------------------------ 361
P LW+S++L++
Sbjct: 440 PDLLWSSKSLIQILLSGNRLGGRLSPAVGKMVALKYLVLDNNNFEGNIPAEIGQLVDLTV 499
Query: 362 FNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGII 421
+ SN + GS+ E+ N + L L+L +N L+ IP +IG L N+ L L+ N G I
Sbjct: 500 LSMQSNNISGSIPPELCNCLHLTTLNLGNNSLSGGIPSQIGKLVNLDYLVLSHNQLTGPI 559
Query: 422 PMEFGDCISLNTL------------DLGSNNLNG--------CVVVVYLLLNNNMLSGKI 461
P+E + TL DL +NNLN CVV+V L L N L+G I
Sbjct: 560 PVEIASNFRIPTLPESSFVQHHGVLDLSNNNLNESIPATIGECVVLVELKLCKNQLTGLI 619
Query: 462 PGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG------- 514
P LS+LTNLTTL+ N L+G IP G+ K+QG+ L NQLTG IP ++G
Sbjct: 620 PPELSKLTNLTTLDFSRNKLSGHIPAALGELRKLQGINLAFNQLTGEIPAAIGDIVSLVI 679
Query: 515 -YLSGNKLYGSVPTSFGNLNGLTHLD---LSCN-----------ELDGIVGLYVQSNKFY 559
L+GN L G +P++ GN+ GL+ LD LS N L G+ L ++ N F
Sbjct: 680 LNLTGNHLTGELPSTLGNMTGLSFLDTLNLSYNLLSGEIPATIGNLSGLSFLDLRGNHFT 739
Query: 560 GEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNL 619
GEIP E+ +LVQL+YLD S N L G P LC+L L ++N + N L GE+P SG C
Sbjct: 740 GEIPDEICSLVQLDYLDLSHNHLTGAFPASLCNLIGLEFVNFSYNVLSGEIPNSGKCAAF 799
Query: 620 SIISLTGNK--------DLCEKIMGSDCQI-------LTFGKLALV-GIVVGSV------ 657
+ GNK LC GS ++ ++FG L ++ +V+G++
Sbjct: 800 TASQFLGNKALCGDVVNSLCLTESGSSLEMGTGAILGISFGSLIVILVVVLGALRLRQLK 859
Query: 658 --------------------------------LVIAIIVFE------------------- 666
L I + +FE
Sbjct: 860 QEVEAKDLEKAKLNMNMTLDPCSLSLDKMKEPLSINVAMFEQPLLRLTLADVLRATNGFS 919
Query: 667 --NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
N+IG GGF T +K +PD + VA+KKL Q +REF AEMETL VKH++LV LLG
Sbjct: 920 KTNIIGDGGFGTVYKAHLPDGRIVAIKKLGHGLSQGNREFLAEMETLGKVKHRHLVPLLG 979
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASL---DWGKRCKIAYGAARGISFLHHGFKPY 781
YCS GEEKLLVY+YM NGSLD WLRNRA +L DW KR +IA G+ARG+ FLHHGF P+
Sbjct: 980 YCSFGEEKLLVYDYMKNGSLDLWLRNRADALEHLDWPKRFRIALGSARGLCFLHHGFIPH 1039
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
IIH DIK SNILL+ FE +V+DFGLARLIS +SHVSTD A T GY+P EYGQ+ R+
Sbjct: 1040 IIHRDIKASNILLDANFEPRVADFGLARLISAYDSHVSTDIAGTFGYIPPEYGQSWRSTT 1099
Query: 842 RGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMKK 884
RGD+YS+GVILLE++TGK+PT +F+D +GGNLV WV +++K
Sbjct: 1100 RGDVYSYGVILLEMLTGKEPTRDDFKDIEGGNLVGWVRQVIRK 1142
|
Source: Physcomitrella patens subsp. patens Species: Physcomitrella patens Genus: Physcomitrella Family: Funariaceae Order: Funariales Class: Bryopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302788101|ref|XP_002975820.1| hypothetical protein SELMODRAFT_103725 [Selaginella moellendorffii] gi|300156821|gb|EFJ23449.1| hypothetical protein SELMODRAFT_103725 [Selaginella moellendorffii] | Back alignment and taxonomy information |
|---|
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 387/1007 (38%), Positives = 525/1007 (52%), Gaps = 197/1007 (19%)
Query: 66 VVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLS 125
+V+L I SL GP+ + L S++ L L N G L + L LK+L V +LS
Sbjct: 265 LVTLDITNNSLSGPIPGEIGRLRSMQELSLGINGFSGSLPWEFGELGSLKILYVANTRLS 324
Query: 126 GSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQ 185
GSIP+ LG ++L+ L +N +G +P GD+ L S+ + + +NG+IP LG
Sbjct: 325 GSIPASLGNCSQLQKFDLSNNLLSGPIPDSFGDLSNLISMSLAVSQINGSIPGALGRCRS 384
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPY 245
LQ +DL+ NLLSG LP L NL+ L V N+LSG IP IG K++ + L
Sbjct: 385 LQVIDLAFNLLSGRLPEEL-ANLERLVSFTVEGNMLSGPIPSWIGRWKRVDSILLSTNS- 442
Query: 246 QLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDV 305
F G + PE+GNCS L+ + + N LSG IP+ELC++ +L ++ L+ NM SG+I
Sbjct: 443 ----FTGSLPPELGNCSSLRDLGVDTNLLSGEIPKELCDARALSQLTLNRNMFSGSIVGT 498
Query: 306 FDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAA 365
F +CTNL++L L +N +SG +P + LPL + DL NNFTG +P LW S LME A+
Sbjct: 499 FSKCTNLTQLDLTSNNLSGPLPTDLLALPLMILDLSGNNFTGTLPDELWQSPILMEIYAS 558
Query: 366 SNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKL------------- 412
+N EG LS + N +L+ L L +N L +P+++G L+N+ +L L
Sbjct: 559 NNNFEGQLSPLVGNLHSLQHLILDNNFLNGSLPRELGKLSNLTVLSLLHNRLSGSIPAEL 618
Query: 413 -----------NSNFFDGIIPMEFGDCISLNTLDLGSNNLNG------------------ 443
SN G IP E G + L+ L L N L G
Sbjct: 619 GHCERLTTLNLGSNSLTGSIPKEVGRLVLLDYLVLSHNKLTGTIPPEMCSDFQQIAIPDS 678
Query: 444 --------------------------CVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLF 477
C V+V + L N LSG IP +++LTNLTTL+L
Sbjct: 679 SFIQHHGILDLSWNELTGTIPPQIGDCAVLVEVHLRGNRLSGSIPKEIAKLTNLTTLDLS 738
Query: 478 GNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL--------SGNKLYGSVPTSF 529
N L+G+IPP+ GD K+QGL +N LTGSIP G L +GN L G++P +
Sbjct: 739 ENQLSGTIPPQLGDCQKIQGLNFANNHLTGSIPSEFGQLGRLVELNVTGNALSGTLPDTI 798
Query: 530 GNLNGLTHLDLSCNELDG----------------------------------IVGLYVQS 555
GNL L+HLD+S N L G + L ++
Sbjct: 799 GNLTFLSHLDVSNNNLSGELPDSMARLLFLVLDLSHNLFRGAIPSSIGNLSGLSYLSLKG 858
Query: 556 NKFYGEIPPELGNLVQLEY------------------------LDFSMNMLDGHIPEKLC 591
N F G IP EL NL+QL Y L+ S N L G +PE+
Sbjct: 859 NGFSGAIPTELANLMQLSYADVSDNELTGKIPDKLCEFSNLSFLNMSNNRLVGPVPERCS 918
Query: 592 SLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMGSDCQILTF------- 644
+ +L ++ L G + RS + L ++GS +F
Sbjct: 919 NFTPQAFL--SNKALCGSIFRSECPSGKHETNSLSASALLGIVIGSVVAFFSFVFALMRC 976
Query: 645 --------------GKLALVGIVVGSVLVIA---------IIVFE--------------- 666
GKL+ + S+L ++ + +FE
Sbjct: 977 RTVKHEPFMKMSDEGKLSNGSSIDPSMLSVSKMKEPLSINVAMFERPLPLRLTLADILQA 1036
Query: 667 -------NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNL 719
N+IG GGF T +K +PD ++VAVKKL QA Q +REF AEMETL VKH+NL
Sbjct: 1037 TGSFCKANIIGDGGFGTVYKAVLPDGRSVAVKKLGQARNQGNREFLAEMETLGKVKHRNL 1096
Query: 720 VQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASL---DWGKRCKIAYGAARGISFLHH 776
V LLGYCS GEEKLLVY+YMVNGSLD WLRNRA +L DW KR KIA G+ARG++FLHH
Sbjct: 1097 VPLLGYCSFGEEKLLVYDYMVNGSLDLWLRNRADALEVLDWPKRFKIATGSARGLAFLHH 1156
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA 836
G P+IIH D+K SNILL+ FE +++DFGLARLIS E+HVSTD A T GY+P EYGQ+
Sbjct: 1157 GLVPHIIHRDMKASNILLDAEFEPRIADFGLARLISAYETHVSTDIAGTFGYIPPEYGQS 1216
Query: 837 GRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMK 883
R+ RGD+YS+GVILLE+++GK+PTG EF+D +GGNL+ WV M+K
Sbjct: 1217 WRSTTRGDVYSYGVILLEILSGKEPTGIEFKDVEGGNLIGWVRQMIK 1263
|
Source: Selaginella moellendorffii Species: Selaginella moellendorffii Genus: Selaginella Family: Selaginellaceae Order: Selaginellales Class: Isoetopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255539505|ref|XP_002510817.1| leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis] gi|223549932|gb|EEF51419.1| leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 390/947 (41%), Positives = 497/947 (52%), Gaps = 285/947 (30%)
Query: 4 LLLCLMVFSLSF----GTFTAIDEPKQERRSLVHFKNSLQNPQVLSGWNKTTRHCHWFGV 59
L LC VF F + T +E ++ +L+ FK SL+NP LS WN++ HC W GV
Sbjct: 8 LFLCFFVFVQPFISLAKSITEQEEHSPDKDNLLSFKASLKNPNFLSSWNQSNPHCTWVGV 67
Query: 60 KCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSV 119
C+ RV SLV+ Q LKGP+SP LF LSSL +LD+SKNL FG++ Q+S LK LK L +
Sbjct: 68 GCQQGRVTSLVLTNQLLKGPLSPSLFYLSSLTVLDVSKNLFFGEIPLQISRLKHLKQLCL 127
Query: 120 GENQLSGSIPSQL------------------------GLLTRLETISLRSNSFTGEMPSE 155
NQLSG IPSQL G LT+++T+ L +N+ G +PS+
Sbjct: 128 AGNQLSGEIPSQLGDLTQLQILKLGSNSFSGKIPPEFGKLTQIDTLDLSTNALFGTVPSQ 187
Query: 156 LG-------------------------DIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLD 190
LG ++K L S+D S N +G IP +G+LT L DL
Sbjct: 188 LGQMIHLRFLDLGNNLLSGSLPFAFFNNLKSLTSMDISNNSFSGVIPPEIGNLTNLTDLY 247
Query: 191 LSDNLLSGSLP--------------------------VSLLKNL---------------- 208
+ N SG LP +S LK+L
Sbjct: 248 IGINSFSGQLPPEIGSLAKLENFFSPSCLISGPLPEQISKLKSLSKLDLSYNPLRCSIPK 307
Query: 209 -----QSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGP---------YQLSL----- 249
Q+LS L+++ + L+G+IP E+GN + L + L +QL +
Sbjct: 308 SIGKLQNLSILNLAYSELNGSIPGELGNCRNLKTIMLSFNSLSGSLPEELFQLPMLTFSA 367
Query: 250 ----------------------------FVGRITPEIGNCSMLKYISLSNNKLSGPIPRE 281
F G++ PEIGNCS LK+ISLSNN L+G IPRE
Sbjct: 368 EKNQLSGPLPSWLGRWNHMEWLFLSSNEFSGKLPPEIGNCSSLKHISLSNNLLTGKIPRE 427
Query: 282 LCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQ 341
LCN+ SL+EI+LDGN SGTI+DVF C NL++LVLV+N+I+GSIPEY++ELPL V DL
Sbjct: 428 LCNAVSLMEIDLDGNFFSGTIDDVFPNCGNLTQLVLVDNQITGSIPEYLAELPLMVLDLD 487
Query: 342 YNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI 401
NNFTG IPVSLW S +LMEF+A++NLL GSL EI NAV L++L LSSN L +PK+I
Sbjct: 488 SNNFTGAIPVSLWKSTSLMEFSASNNLLGGSLPMEIGNAVQLQRLVLSSNQLKGTVPKEI 547
Query: 402 GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNG-------------CVVVV 448
G LT++ +L LNSN +G IP+E GDCI+L TLDLG+N L G C+V+
Sbjct: 548 GKLTSLSVLNLNSNLLEGDIPVELGDCIALTTLDLGNNRLTGSIPESLVDLVELQCLVLS 607
Query: 449 Y-------------------------------LLLNNNMLS------------------- 458
Y L++NMLS
Sbjct: 608 YNNLSGSIPSKSSLYFRQANIPDSSFLQHHGVFDLSHNMLSGSIPEELGNLLVIVDLLIN 667
Query: 459 -----GKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESL 513
G IP SLSRLTNLTTL+L GN+L+G IP EFG S K+QGLYLG NQL+G+IPE+L
Sbjct: 668 NNMLSGAIPRSLSRLTNLTTLDLSGNVLSGPIPLEFGHSSKLQGLYLGKNQLSGAIPETL 727
Query: 514 G--------YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDG-----------IVGLYVQ 554
G L+GNKLYGSVP SFGNL LTHLDLS N+L G +V LYVQ
Sbjct: 728 GGLGSLVKLNLTGNKLYGSVPLSFGNLKELTHLDLSNNDLVGQLPSSLSQMLNLVELYVQ 787
Query: 555 --------------------------------------------------SNKFYGEIPP 564
NK GEIPP
Sbjct: 788 LNRLSGPIDELLSNSMAWRIETMNLSNNFFDGDLPRSLGNLSYLTYLDLHGNKLTGEIPP 847
Query: 565 ELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISL 624
ELGNL+QL+Y D S N L G IPEK+C+L L YLN A+N LEG VPRSGIC +LS ISL
Sbjct: 848 ELGNLMQLQYFDVSGNRLSGQIPEKICTLVNLFYLNFAENNLEGPVPRSGICLSLSKISL 907
Query: 625 TGNKDLCEKIMGSDCQILTFGKLALV------GIVVGSVLVIAIIVF 665
GNK+LC +I GS C+I FG+L+L+ G+ VG +++I I F
Sbjct: 908 AGNKNLCGRITGSACRIRNFGRLSLLNAWGLAGVAVGCMIIILGIAF 954
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|168023746|ref|XP_001764398.1| CLL4A clavata1-like receptor S/T protein kinase protein [Physcomitrella patens subsp. patens] gi|162684262|gb|EDQ70665.1| CLL4A clavata1-like receptor S/T protein kinase protein [Physcomitrella patens subsp. patens] | Back alignment and taxonomy information |
|---|
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 403/1079 (37%), Positives = 549/1079 (50%), Gaps = 206/1079 (19%)
Query: 5 LLCLMVFSLSFGTFTAIDEPKQERRSLVHFKNSLQN--PQVLSGWNKTTRHCHWFGVK-- 60
L+ L+ LS +F + P+ R S + + + N L WN +
Sbjct: 119 LINLVRLDLSMNSFEGVLPPQLSRLSNLEYISVSSNNLTGALPAWNDAMSKLQYVDFSSN 178
Query: 61 ----------CRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKN-LLFGQLSPQVS 109
VV L + + G V ++ ++ L LDL N L G + P++
Sbjct: 179 LFSGPISPLVAMLPSVVHLDLSNNTFTGTVPSEIWTMAGLVELDLGGNQALMGSIPPEIG 238
Query: 110 NLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSG 169
NL L+ L +G SG IP++L L+ + L N F+G +P G +K L +L+
Sbjct: 239 NLVNLQSLYMGNCHFSGLIPAELSKCIALKKLDLGGNDFSGTIPESFGQLKNLVTLNLPD 298
Query: 170 NGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI 229
G+NG+IP+ L + T+L+ LD++ N LSG LP SL L + V N L+G IP +
Sbjct: 299 VGINGSIPASLANCTKLEVLDVAFNELSGPLPDSLAA-LPGIISFSVEGNKLTGPIPSWL 357
Query: 230 GNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLV 289
N + S L L +LF G I PE+G C + +I++ NN L+G IP ELCN+ +L
Sbjct: 358 CNWRNASALLL-----SNNLFTGSIPPELGACPSVHHIAIDNNLLTGTIPAELCNAPNLD 412
Query: 290 EINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGV 348
+I L+ N LSG+++ F +C LSE+ L N++SG +P Y++ LP L + L NN +G
Sbjct: 413 KITLNDNQLSGSLDKTFVKCLQLSEIELTANKLSGEVPPYLATLPKLMILSLGENNLSGT 472
Query: 349 IPVSLWNSENLMEFNAASNLLEGSLSW--------------------------------- 375
IP LW S++L++ + N L GSLS
Sbjct: 473 IPEELWGSKSLIQILLSDNQLGGSLSPSVGKMIALKYLVLDNNNFVGNIPAEIGQLADLT 532
Query: 376 ---------------EISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI 420
E+ N V L L+L +N L+ IP +IG L N+ L L+ N G
Sbjct: 533 VFSMQGNNLSGPIPPELCNCVRLTTLNLGNNTLSGSIPSQIGKLVNLDYLVLSHNQLTGP 592
Query: 421 IPMEFGDCISLNTL------------DLGSNNLNG--------CVVVVYLLLNNNMLSGK 460
IP E + TL DL +N LNG CVV+V L L+ N L+G
Sbjct: 593 IPAEIAADFRIPTLPESSFVQHHGVLDLSNNRLNGSIPTTIGECVVLVELKLSGNQLTGL 652
Query: 461 IPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG------ 514
IP LS+LTNLTTL+ N L+G IP G+ K+QG+ L N+LTG IP +LG
Sbjct: 653 IPSELSKLTNLTTLDFSRNRLSGDIPTALGELRKLQGINLAFNELTGEIPAALGDIVSLV 712
Query: 515 --YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIV----------GLYVQS------- 555
++ N L G++P + GNL GL+ LDLS N+L G++ GL +S
Sbjct: 713 KLNMTNNHLTGAIPETLGNLTGLSFLDLSLNQLGGVIPQNFFSGTIHGLLSESSVWHQMQ 772
Query: 556 ------------------------------NKFYGEIPPELGNLVQLEYLDFSMNMLDGH 585
N+F GEIP E+G+L QL+YLD S N L G
Sbjct: 773 TLNLSYNQLSGDIPATIGNLSGLSFLDLRGNRFTGEIPDEIGSLAQLDYLDLSHNHLTGP 832
Query: 586 IPEKLCSLPYLLYLN-----LADNRLEGEVPRSGICQNLSIISLTGNKDLCEKI-MGSDC 639
P LC L L +LN LA L G+V + +C+ S S+ + I +GS
Sbjct: 833 FPANLCDLLGLEFLNFSYNALAGEALCGDV-VNFVCRKQSTSSMGISTGAILGISLGSLI 891
Query: 640 QIL--TFGKLALVGIV----------------------------VGSVLVIAIIVFE--- 666
IL FG L L + + L I + +FE
Sbjct: 892 AILIVVFGALRLRQLKQEVEAKDLEKAKLNMNMALDPCSLSLDKMKEPLSINVAMFEQPL 951
Query: 667 ------------------NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEM 708
N+IG GGF T +K + D + VA+KKL Q +REF AEM
Sbjct: 952 LRLTLADVLRATNGFSKTNIIGDGGFGTVYKAHLSDGRIVAIKKLGHGLSQGNREFLAEM 1011
Query: 709 ETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASL---DWGKRCKIAY 765
ETL VKH++LV LLGYCS GEEKLLVY+YM+NGSLD WLRNRA +L DW KR +IA
Sbjct: 1012 ETLGKVKHRHLVPLLGYCSFGEEKLLVYDYMINGSLDLWLRNRADALEVLDWPKRFRIAL 1071
Query: 766 GAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT 825
G+ARG+ FLHHGF P+IIH DIK SNILL+ FE +V+DFGLARLIS +SHVSTD A T
Sbjct: 1072 GSARGLCFLHHGFIPHIIHRDIKASNILLDANFEPRVADFGLARLISAYDSHVSTDIAGT 1131
Query: 826 IGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMKK 884
GY+P EYGQ+ R+ RGD+YS+GVILLEL+TGK+PT +F+D +GGNLV WV ++KK
Sbjct: 1132 FGYIPPEYGQSWRSTTRGDVYSYGVILLELLTGKEPTRDDFKDIEGGNLVGWVRQVIKK 1190
|
Source: Physcomitrella patens subsp. patens Species: Physcomitrella patens Genus: Physcomitrella Family: Funariaceae Order: Funariales Class: Bryopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 885 | ||||||
| TAIR|locus:2182870 | 1192 | EMS1 "EXCESS MICROSPOROCYTES1" | 0.241 | 0.179 | 0.691 | 5.3e-149 | |
| UNIPROTKB|Q8RZV7 | 1294 | P0413C03.22 "Putative extra sp | 0.245 | 0.167 | 0.576 | 1.9e-127 | |
| TAIR|locus:2097310 | 1002 | BAM2 "BARELY ANY MERISTEM 2" [ | 0.671 | 0.592 | 0.302 | 6e-106 | |
| TAIR|locus:2160791 | 1102 | AT5G63930 [Arabidopsis thalian | 0.613 | 0.492 | 0.302 | 1.1e-104 | |
| TAIR|locus:2092810 | 1164 | BRL3 "BRI1-like 3" [Arabidopsi | 0.247 | 0.188 | 0.533 | 1.6e-104 | |
| TAIR|locus:2085949 | 1141 | AT3G24240 [Arabidopsis thalian | 0.609 | 0.472 | 0.336 | 4.1e-103 | |
| TAIR|locus:2120362 | 1249 | GSO1 "GASSHO1" [Arabidopsis th | 0.433 | 0.307 | 0.344 | 2e-102 | |
| TAIR|locus:2041150 | 1143 | BRL2 "BRI1-like 2" [Arabidopsi | 0.235 | 0.181 | 0.536 | 2.3e-102 | |
| UNIPROTKB|Q942F3 | 1121 | P0480C01.18-1 "cDNA clone:J033 | 0.236 | 0.186 | 0.551 | 3e-102 | |
| TAIR|locus:2046525 | 1124 | AT2G33170 [Arabidopsis thalian | 0.621 | 0.489 | 0.292 | 5.2e-102 |
| TAIR|locus:2182870 EMS1 "EXCESS MICROSPOROCYTES1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 784 (281.0 bits), Expect = 5.3e-149, Sum P(2) = 5.3e-149
Identities = 150/217 (69%), Positives = 173/217 (79%)
Query: 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGY 725
+N+IG GGF T +K +P +KTVAVKKLS+A Q +REF AEMETL VKH NLV LLGY
Sbjct: 920 KNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGY 979
Query: 726 CSVGEEKLLVYEYMVNGSLDDWLRNRAASL---DWGKRCKIAYGAARGISFLHHGFKPYI 782
CS EEKLLVYEYMVNGSLD WLRN+ L DW KR KIA GAARG++FLHHGF P+I
Sbjct: 980 CSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHI 1039
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER 842
IH DIK SNILL+ FE KV+DFGLARLIS CESHVST A T GY+P EYGQ+ RA +
Sbjct: 1040 IHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTK 1099
Query: 843 GDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
GD+YSFGVILLELVTGK+PTGP+F++ +GGNLV W +
Sbjct: 1100 GDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAI 1136
|
|
| UNIPROTKB|Q8RZV7 P0413C03.22 "Putative extra sporogenous cells" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 670 (240.9 bits), Expect = 1.9e-127, Sum P(2) = 1.9e-127
Identities = 128/222 (57%), Positives = 166/222 (74%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGY 725
++IG GGF T +K +P+ + VA+K+L Q DREF AEMET+ VKH NLV LLGY
Sbjct: 1006 HIIGDGGFGTVYKAALPEGRRVAIKRLHGGHQFQGDREFLAEMETIGKVKHPNLVPLLGY 1065
Query: 726 CSVGEEKLLVYEYMVNGSLDDWLRNRAASLD---WGKRCKIAYGAARGISFLHHGFKPYI 782
C G+E+ L+YEYM NGSL+ WLRNRA +L+ W R KI G+ARG++FLHHGF P+I
Sbjct: 1066 CVCGDERFLIYEYMENGSLEMWLRNRADALEALGWPDRLKICLGSARGLAFLHHGFVPHI 1125
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER 842
IH D+K+SNILL++ FE +VSDFGLAR+IS CE+HVSTD A T GY+P EYG ++ +
Sbjct: 1126 IHRDMKSSNILLDENFEPRVSDFGLARIISACETHVSTDIAGTFGYIPPEYGLTMKSTTK 1185
Query: 843 GDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMKK 884
GD+YSFGV++LEL+TG+ PTG E E + GGNLV WV M+ +
Sbjct: 1186 GDVYSFGVVMLELLTGRPPTGQE-EVQGGGNLVGWVRWMIAR 1226
|
|
| TAIR|locus:2097310 BAM2 "BARELY ANY MERISTEM 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 591 (213.1 bits), Expect = 6.0e-106, Sum P(2) = 6.0e-106
Identities = 192/634 (30%), Positives = 283/634 (44%)
Query: 4 LLLCLMVFSLSFGTFTAIDEPKQERRSLVHFKNSL---QNPQVLSGWNKTTRHCHWFGVK 60
LLL L++ +S +FT + +P E +L+ K+S ++ +L+ WN +T C W GV
Sbjct: 6 LLLLLLLLHISH-SFT-VAKPITELHALLSLKSSFTIDEHSPLLTSWNLSTTFCSWTGVT 63
Query: 61 CRHS--RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLS 118
C S V SL + +L G +S + +L L+ L L+ N + G + PQ+SNL L+ L+
Sbjct: 64 CDVSLRHVTSLDLSGLNLSGTLSSDVAHLPLLQNLSLAANQISGPIPPQISNLYELRHLN 123
Query: 119 VGENQLSGSIPSQLGL-LTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIP 177
+ N +GS P +L L L + L +N+ TG++P L ++ QL+ L GN +G IP
Sbjct: 124 LSNNVFNGSFPDELSSGLVNLRVLDLYNNNLTGDLPVSLTNLTQLRHLHLGGNYFSGKIP 183
Query: 178 SRXXXXXXXXXXXXXXXXXXXXXPVSLLKNLQSLSYLDVSN-NLLSGNIPPEIGNLKKLS 236
+ P + NL +L L + N +PPEIGNL +L
Sbjct: 184 ATYGTWPVLEYLAVSGNELTGKIPPEI-GNLTTLRELYIGYYNAFENGLPPEIGNLSEL- 241
Query: 237 DLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGN 296
+ L G I PEIG L + L N +G I +EL SL ++L N
Sbjct: 242 ---VRFDAANCGL-TGEIPPEIGKLQKLDTLFLQVNAFTGTITQELGLISSLKSMDLSNN 297
Query: 297 MLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWN 355
M +G I F + NL+ L L N++ G+IPE+I E+P L+V L NNFTG IP L
Sbjct: 298 MFTGEIPTSFSQLKNLTLLNLFRNKLYGAIPEFIGEMPELEVLQLWENNFTGSIPQKLGE 357
Query: 356 SENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSN 415
+ L+ + +SN L G+L + + L L N L IP +G ++ +++ N
Sbjct: 358 NGRLVILDLSSNKLTGTLPPNMCSGNRLMTLITLGNFLFGSIPDSLGKCESLTRIRMGEN 417
Query: 416 FFDGIIPME-FG----DCISLN----TLDLGSXXXXXXXXXXXXXXXXXMLSGKIPXXXX 466
F +G IP E FG + L T +L LSG +P
Sbjct: 418 FLNGSIPKELFGLPKLSQVELQDNYLTGELPISGGGVSGDLGQISLSNNQLSGSLPAAIG 477
Query: 467 XXXXXXXXXXXXXXXXXXIPPEFGDSLKVQGLYLGHNQLTGSI-PESLGYLSGNKLYGSV 525
IPPE G ++ L HN +G I PE +S KL V
Sbjct: 478 NLSGVQKLLLDGNKFSGSIPPEIGRLQQLSKLDFSHNLFSGRIAPE----ISRCKLLTFV 533
Query: 526 PTSFGNLNGLTHLDLSCNELDG--IVG-LYVQSNKFYGEIPPELGNLVQLEYLDFSMNML 582
S L+G D+ NEL G I+ L + N G IP + ++ L +DFS N L
Sbjct: 534 DLSRNELSG----DIP-NELTGMKILNYLNLSRNHLVGSIPVTIASMQSLTSVDFSYNNL 588
Query: 583 DGHIPEKXXXXXXXXXXXXADNRLEGEVPRSGIC 616
G +P ++ L G P G C
Sbjct: 589 SGLVPSTGQFSYFNYTSFVGNSHLCG--PYLGPC 620
|
|
| TAIR|locus:2160791 AT5G63930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 598 (215.6 bits), Expect = 1.1e-104, Sum P(2) = 1.1e-104
Identities = 176/581 (30%), Positives = 259/581 (44%)
Query: 68 SLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGS 127
+L+I + G + + NL SL L N + GQL + NLKRL G+N +SGS
Sbjct: 149 NLIIYNNRISGSLPVEIGNLLSLSQLVTYSNNISGQLPRSIGNLKRLTSFRAGQNMISGS 208
Query: 128 IPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRXXXXXXXX 187
+PS++G L + L N +GE+P E+G +K+L + N +G IP
Sbjct: 209 LPSEIGGCESLVMLGLAQNQLSGELPKEIGMLKKLSQVILWENEFSGFIPREISNCTSLE 268
Query: 188 XXXXXXXXXXXXXPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQL 247
P L +LQSL +L + N L+G IP EIGNL ++ +
Sbjct: 269 TLALYKNQLVGPIPKEL-GDLQSLEFLYLYRNGLNGTIPREIGNLSYAIEI-----DFSE 322
Query: 248 SLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFD 307
+ G I E+GN L+ + L N+L+G IP EL +L +++L N L+G I F
Sbjct: 323 NALTGEIPLELGNIEGLELLYLFENQLTGTIPVELSTLKNLSKLDLSINALTGPIPLGFQ 382
Query: 308 RCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAAS 366
L L L N +SG+IP + L V D+ N+ +G IP L N++ N +
Sbjct: 383 YLRGLFMLQLFQNSLSGTIPPKLGWYSDLWVLDMSDNHLSGRIPSYLCLHSNMIILNLGT 442
Query: 367 NLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426
N L G++ I+ L +L L+ N L + P + N+ ++L N F G IP E G
Sbjct: 443 NNLSGNIPTGITTCKTLVQLRLARNNLVGRFPSNLCKQVNVTAIELGQNRFRGSIPREVG 502
Query: 427 DCISLNTLDLGSXXXXXX--------XXXXXXXXXXXMLSGKIPXXXXXXXXXXXXXXXX 478
+C +L L L L+G++P
Sbjct: 503 NCSALQRLQLADNGFTGELPREIGMLSQLGTLNISSNKLTGEVPSEIFNCKMLQRLDMCC 562
Query: 479 XXXXXXIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLS--------GNKLYGSVPTSFG 530
+P E G +++ L L +N L+G+IP +LG LS GN GS+P G
Sbjct: 563 NNFSGTLPSEVGSLYQLELLKLSNNNLSGTIPVALGNLSRLTELQMGGNLFNGSIPRELG 622
Query: 531 NLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKX 590
+L GL + L + NK GEIPPEL NLV LE+L + N L G IP
Sbjct: 623 SLTGLQ------------IALNLSYNKLTGEIPPELSNLVMLEFLLLNNNNLSGEIPSSF 670
Query: 591 XXXXXXXXXXXADNRLEGEVPRSGICQNLSIISLTGNKDLC 631
+ N L G +P + +N+S+ S GN+ LC
Sbjct: 671 ANLSSLLGYNFSYNSLTGPIP---LLRNISMSSFIGNEGLC 708
|
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| TAIR|locus:2092810 BRL3 "BRI1-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 602 (217.0 bits), Expect = 1.6e-104, Sum P(2) = 1.6e-104
Identities = 120/225 (53%), Positives = 158/225 (70%)
Query: 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGY 725
+++IG GGF +K + D VA+KKL Q TGQ DREF AEMET+ +KH+NLV LLGY
Sbjct: 861 DSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGY 920
Query: 726 CSVGEEKLLVYEYMVNGSLDDWLRNRAAS----LDWGKRCKIAYGAARGISFLHHGFKPY 781
C +GEE+LLVYEYM GSL+ L + LDW R KIA GAARG++FLHH P+
Sbjct: 921 CKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPH 980
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGYVPSEYGQAGRAN 840
IIH D+K+SN+LL+ F A+VSDFG+ARL+S ++H+S T A T GYVP EY Q+ R
Sbjct: 981 IIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCT 1040
Query: 841 ERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMKKE 885
+GD+YS+GVILLEL++GK+P PE E + NLV W + +++
Sbjct: 1041 AKGDVYSYGVILLELLSGKKPIDPE-EFGEDNNLVGWAKQLYREK 1084
|
|
| TAIR|locus:2085949 AT3G24240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 632 (227.5 bits), Expect = 4.1e-103, Sum P(2) = 4.1e-103
Identities = 195/579 (33%), Positives = 270/579 (46%)
Query: 69 LVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSI 128
L I +L G + L + L++LDLS N L G + +S L+ L+ L + NQL+G I
Sbjct: 110 LTISGANLTGTLPESLGDCLGLKVLDLSSNGLVGDIPWSLSKLRNLETLILNSNQLTGKI 169
Query: 129 PSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNG-LNGTIPSRXXXXXXXX 187
P + ++L+++ L N TG +P+ELG + L+ + GN ++G IPS
Sbjct: 170 PPDISKCSKLKSLILFDNLLTGSIPTELGKLSGLEVIRIGGNKEISGQIPSEIGDCSNLT 229
Query: 188 XXXXXXXXXXXXXPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQL 247
P SL K L+ L L + ++SG IP ++GN +L DL+L Y+
Sbjct: 230 VLGLAETSVSGNLPSSLGK-LKKLETLSIYTTMISGEIPSDLGNCSELVDLFL----YEN 284
Query: 248 SLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFD 307
SL G I EIG + L+ + L N L G IP E+ N +L I+L N+LSG+I
Sbjct: 285 SLS-GSIPREIGQLTKLEQLFLWQNSLVGGIPEEIGNCSNLKMIDLSLNLLSGSIPSSIG 343
Query: 308 RCTNLSELVLVNNRISGSIPEYISELPLKV-FDLQYNNFTGVIPVSLWNSENLMEFNAAS 366
R + L E ++ +N+ SGSIP IS V L N +G+IP L L F A S
Sbjct: 344 RLSFLEEFMISDNKFSGSIPTTISNCSSLVQLQLDKNQISGLIPSELGTLTKLTLFFAWS 403
Query: 367 NLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426
N LEGS+ +++ L+ LDLS N LT IP + L N+ L L SN G IP E G
Sbjct: 404 NQLEGSIPPGLADCTDLQALDLSRNSLTGTIPSGLFMLRNLTKLLLISNSLSGFIPQEIG 463
Query: 427 DCISLNTLDLG--------SXXXXXXXXXXXXXXXXXMLSGKIPXXXXXXXXXXXXXXXX 478
+C SL L LG L GK+P
Sbjct: 464 NCSSLVRLRLGFNRITGEIPSGIGSLKKINFLDFSSNRLHGKVPDEIGSCSELQMIDLSN 523
Query: 479 XXXXXXIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL-SGNKLY-------GSVPTSFG 530
+P +Q L + NQ +G IP SLG L S NKL GS+PTS G
Sbjct: 524 NSLEGSLPNPVSSLSGLQVLDVSANQFSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLG 583
Query: 531 NLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEY-LDFSMNMLDGHIPEK 589
+GL LDL NEL G EIP ELG++ LE L+ S N L G IP K
Sbjct: 584 MCSGLQLLDLGSNELSG-------------EIPSELGDIENLEIALNLSSNRLTGKIPSK 630
Query: 590 XXXXXXXXXXXXADNRLEGEV-PRSGICQNLSIISLTGN 627
+ N LEG++ P + I +NL ++++ N
Sbjct: 631 IASLNKLSILDLSHNMLEGDLAPLANI-ENLVSLNISYN 668
|
|
| TAIR|locus:2120362 GSO1 "GASSHO1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 547 (197.6 bits), Expect = 2.0e-102, Sum P(3) = 2.0e-102
Identities = 136/395 (34%), Positives = 210/395 (53%)
Query: 44 LSGWNKTTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQ 103
L+G T WFG R ++ L + + +L GP+ L NL+SL L L N L G+
Sbjct: 78 LTGLGLTGSISPWFG---RFDNLIHLDLSSNNLVGPIPTALSNLTSLESLFLFSNQLTGE 134
Query: 104 LSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLK 163
+ Q+ +L ++ L +G+N+L G IP LG L L+ ++L S TG +PS+LG + +++
Sbjct: 135 IPSQLGSLVNIRSLRIGDNELVGDIPETLGNLVNLQMLALASCRLTGPIPSQLGRLVRVQ 194
Query: 164 SLDFSGNGLNGTIPSRXXXXXXXXXXXXXXXXXXXXXPVSLLKNLQSLSYLDVSNNLLSG 223
SL N L G IP+ P L + L++L L+++NN L+G
Sbjct: 195 SLILQDNYLEGPIPAELGNCSDLTVFTAAENMLNGTIPAELGR-LENLEILNLANNSLTG 253
Query: 224 NIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC 283
IP ++G + +L YL + QL + + ++GN L+ + LS N L+G IP E
Sbjct: 254 EIPSQLGEMSQLQ--YLSLMANQLQGLIPKSLADLGN---LQTLDLSANNLTGEIPEEFW 308
Query: 284 NSGSLVEINLDGNMLSGTI-EDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQ 341
N L+++ L N LSG++ + + TNL +LVL ++SG IP +S+ LK DL
Sbjct: 309 NMSQLLDLVLANNHLSGSLPKSICSNNTNLEQLVLSGTQLSGEIPVELSKCQSLKQLDLS 368
Query: 342 YNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI 401
N+ G IP +L+ L + +N LEG+LS ISN L+ L L N L ++PK+I
Sbjct: 369 NNSLAGSIPEALFELVELTDLYLHNNTLEGTLSPSISNLTNLQWLVLYHNNLEGKLPKEI 428
Query: 402 GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDL 436
L +++L L N F G IP E G+C SL +D+
Sbjct: 429 SALRKLEVLFLYENRFSGEIPQEIGNCTSLKMIDM 463
|
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| TAIR|locus:2041150 BRL2 "BRI1-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 559 (201.8 bits), Expect = 2.3e-102, Sum P(2) = 2.3e-102
Identities = 117/218 (53%), Positives = 153/218 (70%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYC 726
++IG GGF FK T+ D +VA+KKL + + Q DREF AEMETL +KH+NLV LLGYC
Sbjct: 842 SMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYC 901
Query: 727 SVGEEKLLVYEYMVNGSLDDWLRN-RAAS----LDWGKRCKIAYGAARGISFLHHGFKPY 781
+GEE+LLVYE+M GSL++ L R L W +R KIA GAA+G+ FLHH P+
Sbjct: 902 KIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPH 961
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGYVPSEYGQAGRAN 840
IIH D+K+SN+LL+ EA+VSDFG+ARLIS ++H+S T A T GYVP EY Q+ R
Sbjct: 962 IIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCT 1021
Query: 841 ERGDIYSFGVILLELVTGKQPTGPE-FEDKDGGNLVDW 877
+GD+YS GV++LE+++GK+PT E F D NLV W
Sbjct: 1022 AKGDVYSIGVVMLEILSGKRPTDKEEFGDT---NLVGW 1056
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| UNIPROTKB|Q942F3 P0480C01.18-1 "cDNA clone:J033069J12, full insert sequence" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 589 (212.4 bits), Expect = 3.0e-102, Sum P(3) = 3.0e-102
Identities = 118/214 (55%), Positives = 152/214 (71%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV 728
IG GGF +K + D K VA+KKL +GQ DREF AEMET+ +KH+NLV LLGYC
Sbjct: 813 IGSGGFGDVYKAQLKDGKVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKA 872
Query: 729 GEEKLLVYEYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHM 785
GEE+LLVY+YM GSL+D L +R L+W R KIA GAARG++FLHH P+IIH
Sbjct: 873 GEERLLVYDYMKFGSLEDVLHDRKKIGKKLNWEARRKIAVGAARGLAFLHHNCIPHIIHR 932
Query: 786 DIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGYVPSEYGQAGRANERGD 844
D+K+SN+L+++ EA+VSDFG+ARL+S ++H+S T A T GYVP EY Q+ R +GD
Sbjct: 933 DMKSSNVLIDEQLEARVSDFGMARLMSVVDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGD 992
Query: 845 IYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWV 878
+YS+GV+LLEL+TGK PT +D NLV WV
Sbjct: 993 VYSYGVVLLELLTGKPPTDSADFGEDN-NLVGWV 1025
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| TAIR|locus:2046525 AT2G33170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 608 (219.1 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 171/585 (29%), Positives = 264/585 (45%)
Query: 64 SRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQ 123
S++ S I L GP+ + +L +L L N L G L + NL +L G+N
Sbjct: 157 SQLRSFNICNNKLSGPLPEEIGDLYNLEELVAYTNNLTGPLPRSLGNLNKLTTFRAGQND 216
Query: 124 LSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRXXXX 183
SG+IP+++G L+ + L N +GE+P E+G + +L+ + N +G IP
Sbjct: 217 FSGNIPTEIGKCLNLKLLGLAQNFISGELPKEIGMLVKLQEVILWQNKFSGFIPKDIGNL 276
Query: 184 XXXXXXXXXXXXXXXXXPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIG 243
P S + N++SL L + N L+G IP E+G L K+ ++
Sbjct: 277 TSLETLALYGNSLVGPIP-SEIGNMKSLKKLYLYQNQLNGTIPKELGKLSKVMEI----- 330
Query: 244 PYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE 303
+ +L G I E+ S L+ + L NKL+G IP EL +L +++L N L+G I
Sbjct: 331 DFSENLLSGEIPVELSKISELRLLYLFQNKLTGIIPNELSKLRNLAKLDLSINSLTGPIP 390
Query: 304 DVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEF 362
F T++ +L L +N +SG IP+ + PL V D N +G IP + NL+
Sbjct: 391 PGFQNLTSMRQLQLFHNSLSGVIPQGLGLYSPLWVVDFSENQLSGKIPPFICQQSNLILL 450
Query: 363 NAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIP 422
N SN + G++ + +L +L + N LT Q P ++ L N+ ++L+ N F G +P
Sbjct: 451 NLGSNRIFGNIPPGVLRCKSLLQLRVVGNRLTGQFPTELCKLVNLSAIELDQNRFSGPLP 510
Query: 423 MEFGDCISLNTLDLGSXXXXXX--------XXXXXXXXXXXMLSGKIPXXXXXXXXXXXX 474
E G C L L L + L+G IP
Sbjct: 511 PEIGTCQKLQRLHLAANQFSSNLPNEISKLSNLVTFNVSSNSLTGPIPSEIANCKMLQRL 570
Query: 475 XXXXXXXXXXIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLS--------GNKLYGSVP 526
+PPE G +++ L L N+ +G+IP ++G L+ GN GS+P
Sbjct: 571 DLSRNSFIGSLPPELGSLHQLEILRLSENRFSGNIPFTIGNLTHLTELQMGGNLFSGSIP 630
Query: 527 TSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHI 586
G L+ L + + + N F GEIPPE+GNL L YL + N L G I
Sbjct: 631 PQLGLLSSLQ------------IAMNLSYNDFSGEIPPEIGNLHLLMYLSLNNNHLSGEI 678
Query: 587 PEKXXXXXXXXXXXXADNRLEGEVPRSGICQNLSIISLTGNKDLC 631
P + N L G++P + I QN+++ S GNK LC
Sbjct: 679 PTTFENLSSLLGCNFSYNNLTGQLPHTQIFQNMTLTSFLGNKGLC 723
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00007369001 | SubName- Full=Chromosome chr16 scaffold_189, whole genome shotgun sequence; (1045 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 885 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-113 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-40 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 3e-38 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 4e-38 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 3e-37 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 4e-36 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-33 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-31 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 9e-29 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 2e-27 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 1e-25 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 5e-25 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 8e-25 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 2e-24 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 6e-24 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 6e-23 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 6e-23 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 6e-23 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 9e-23 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 4e-22 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 8e-22 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 8e-22 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 1e-21 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 4e-21 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 6e-21 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 7e-21 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 1e-20 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-20 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 2e-20 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-20 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 3e-20 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 7e-20 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 8e-20 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 1e-19 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 1e-19 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-19 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 2e-19 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 7e-19 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 9e-19 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-18 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 5e-18 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 8e-18 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 2e-17 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 4e-17 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 5e-17 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 6e-17 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 7e-17 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 1e-16 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 2e-16 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-16 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 3e-16 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 4e-16 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 4e-16 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 6e-16 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 6e-16 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 9e-16 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 1e-15 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 1e-15 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-15 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 2e-15 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 3e-15 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 4e-15 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 5e-15 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 6e-15 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 7e-15 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 7e-15 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 1e-14 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-14 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 2e-14 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 2e-14 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 2e-14 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 3e-14 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 3e-14 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 4e-14 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 4e-14 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 6e-14 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 6e-14 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 1e-13 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 1e-13 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 1e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-13 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-13 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 2e-13 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 2e-13 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 3e-13 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 3e-13 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 3e-13 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 5e-13 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 5e-13 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 5e-13 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 7e-13 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 8e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-12 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 1e-12 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 1e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-12 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 2e-12 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 2e-12 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 2e-12 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 3e-12 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 3e-12 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 3e-12 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 3e-12 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 4e-12 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 7e-12 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 8e-12 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 9e-12 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-11 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 1e-11 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 1e-11 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 1e-11 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 2e-11 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 2e-11 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 2e-11 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 2e-11 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 2e-11 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 2e-11 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 3e-11 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 3e-11 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 4e-11 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 4e-11 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 4e-11 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 5e-11 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 6e-11 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 7e-11 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 7e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 8e-11 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 9e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-10 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 1e-10 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 1e-10 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 1e-10 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 1e-10 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 2e-10 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 2e-10 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 2e-10 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 2e-10 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 3e-10 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 4e-10 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 4e-10 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 7e-10 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 7e-10 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 8e-10 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 8e-10 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 8e-10 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 8e-10 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 9e-10 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 9e-10 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 1e-09 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 1e-09 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 1e-09 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 1e-09 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 1e-09 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 1e-09 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 1e-09 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 2e-09 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 2e-09 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 2e-09 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 3e-09 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 3e-09 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 3e-09 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 3e-09 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 3e-09 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 3e-09 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 3e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-09 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 4e-09 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 5e-09 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 5e-09 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 6e-09 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 6e-09 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 6e-09 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 7e-09 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 7e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 8e-09 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 1e-08 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 1e-08 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 2e-08 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 2e-08 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 2e-08 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 2e-08 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 3e-08 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 3e-08 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 4e-08 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 4e-08 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 5e-08 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 5e-08 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 5e-08 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 5e-08 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 7e-08 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 8e-08 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 1e-07 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 2e-07 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 2e-07 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 2e-07 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 2e-07 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-07 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 2e-07 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 2e-07 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 2e-07 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 2e-07 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 3e-07 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 3e-07 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 4e-07 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 4e-07 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 4e-07 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 4e-07 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 5e-07 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 5e-07 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 5e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 6e-07 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 9e-07 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 9e-07 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 1e-06 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 1e-06 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 1e-06 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 1e-06 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 1e-06 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 1e-06 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 2e-06 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 2e-06 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 2e-06 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-06 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 3e-06 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 3e-06 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 3e-06 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 3e-06 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 4e-06 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 4e-06 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-06 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 5e-06 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 5e-06 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 5e-06 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 6e-06 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 6e-06 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 9e-06 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-05 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 1e-05 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 1e-05 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 1e-05 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 1e-05 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 1e-05 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 1e-05 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 2e-05 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 2e-05 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 2e-05 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 3e-05 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 4e-05 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 4e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 5e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 5e-05 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 7e-05 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 7e-05 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 8e-05 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 1e-04 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 1e-04 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 1e-04 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 1e-04 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 1e-04 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 1e-04 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 1e-04 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 1e-04 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 2e-04 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 2e-04 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 2e-04 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 2e-04 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 2e-04 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 3e-04 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 4e-04 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 5e-04 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 6e-04 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 6e-04 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 7e-04 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 7e-04 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 7e-04 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 9e-04 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 0.001 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 0.001 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 0.001 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 0.001 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.002 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.002 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 0.002 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 0.002 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 0.002 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 0.003 | |
| PLN03210 | 1153 | PLN03210, PLN03210, Resistant to P | 0.004 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 0.004 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 368 bits (946), Expect = e-113
Identities = 289/943 (30%), Positives = 443/943 (46%), Gaps = 132/943 (13%)
Query: 4 LLLCLMVFSLSFGTFTAIDEPKQERRSLVHFKNSLQNP-QVLSGWNKTTRHCHWFGVKCR 62
L+ L L+F A +E L+ FK+S+ +P + LS WN + C W G+ C
Sbjct: 12 LIFMLFFLFLNFSMLHA-----EELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCN 66
Query: 63 H-SRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNL-KRLKMLSVG 120
+ SRVVS+ + +++ G +S +F L ++ ++LS N L G + + L+ L++
Sbjct: 67 NSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLS 126
Query: 121 ENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRL 180
N +GSIP G + LET+ L +N +GE+P+++G LK LD GN L G IP+ L
Sbjct: 127 NNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL 184
Query: 181 GDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL 240
+LT L+ L L+ N L G +P L + ++SL ++ + N LSG IP EIG L L+ L L
Sbjct: 185 TNLTSLEFLTLASNQLVGQIPRELGQ-MKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDL 243
Query: 241 GIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSG 300
+ G I +GN L+Y+ L NKLSGPIP + + L+ ++L N LSG
Sbjct: 244 -----VYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG 298
Query: 301 TIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENL 359
I ++ + NL L L +N +G IP ++ LP L+V L N F+G IP +L NL
Sbjct: 299 EIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNL 358
Query: 360 MEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDG 419
+ ++N L G + + ++ L KL L SN L +IPK +G +++ ++L N F G
Sbjct: 359 TVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSG 418
Query: 420 IIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGN 479
+P EF + LD+ +NN L G+I + +L L+L N
Sbjct: 419 ELPSEFTKLPLVYFLDISNNN----------------LQGRINSRKWDMPSLQMLSLARN 462
Query: 480 LLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGY--------LSGNKLYGSVPTSFGN 531
G +P FG S +++ L L NQ +G++P LG LS NKL G +P +
Sbjct: 463 KFFGGLPDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSS 521
Query: 532 LNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLC 591
L LDLS N+ G+IP + L LD S N L G IP+ L
Sbjct: 522 CKKLVSLDLS-------------HNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLG 568
Query: 592 SLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMGSD------------- 638
++ L+ +N++ N L G +P +G ++ ++ GN DLC S
Sbjct: 569 NVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSW 628
Query: 639 -----CQILTFGKLALVGIVV-------------------------------GSVLVIAI 662
C + F LALV S+ + I
Sbjct: 629 WFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDI 688
Query: 663 IVF---ENVIGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK--H 716
+ ENVI G ++KG ++ + VK+++ D E DM K H
Sbjct: 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEIN------DVNSIPSSEIADMGKLQH 742
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH 776
N+V+L+G C + L++EY+ +L + LRN L W +R KIA G A+ + FLH
Sbjct: 743 PNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHC 798
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI--GYVPSEYG 834
P ++ ++ I+++ E L + TDT I YV E
Sbjct: 799 RCSPAVVVGNLSPEKIIIDGKDE--------PHLRLSLPGLLCTDTKCFISSAYVAPETR 850
Query: 835 QAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDW 877
+ E+ DIY FG+IL+EL+TGK P EF G++V+W
Sbjct: 851 ETKDITEKSDIYGFGLILIELLTGKSPADAEFGVH--GSIVEW 891
|
Length = 968 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 149 bits (380), Expect = 1e-40
Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 663 IVFENVIGGGGFRTAFKGT--MPDQKT---VAVKKL-SQATGQCDREFAAEMETLDMVKH 716
+ +G G F +KG K VAVK L A+ Q EF E + + H
Sbjct: 1 LTLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDH 60
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH 776
N+V+LLG C+ E +V EYM G L +LR L A ARG+ +L
Sbjct: 61 PNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLES 120
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA 836
K + IH D+ N L+ + K+SDFGL+R + D + + I ++ E +
Sbjct: 121 --KNF-IHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKE 177
Query: 837 GRANERGDIYSFGVILLELVT-GKQP 861
G+ + D++SFGV+L E+ T G+QP
Sbjct: 178 GKFTSKSDVWSFGVLLWEIFTLGEQP 203
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 3e-38
Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 11/207 (5%)
Query: 663 IVFENVIGGGGFRTAFKGT-----MPDQKTVAVKKL-SQATGQCDREFAAEMETLDMVKH 716
+ +G G F +KGT + VAVK L A+ Q EF E + + H
Sbjct: 1 LTLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDH 60
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFLH 775
N+V+LLG C+ E ++V EYM G L D+LR NR L A ARG+ +L
Sbjct: 61 PNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE 120
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQ 835
K + IH D+ N L+ + K+SDFGL+R + D + + I ++ E +
Sbjct: 121 S--KNF-IHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLK 177
Query: 836 AGRANERGDIYSFGVILLELVT-GKQP 861
G+ + D++SFGV+L E+ T G++P
Sbjct: 178 EGKFTSKSDVWSFGVLLWEIFTLGEEP 204
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 4e-38
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 11/207 (5%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK-----TVAVKKLSQ-ATGQCDREFAAEMETLDMVKH 716
+ +G G F +KGT+ VAVK L + A+ + EF E + + H
Sbjct: 1 LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSH 60
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH 776
N+V+LLG C+ GE +V EYM G L D+LR L ++A A+G+ +L
Sbjct: 61 PNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLES 120
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IGYVPSEYGQ 835
K + +H D+ N L+ + K+SDFGL+R I + + + I ++ E +
Sbjct: 121 --KNF-VHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLK 177
Query: 836 AGRANERGDIYSFGVILLELVT-GKQP 861
G+ + D++SFGV+L E+ T G+QP
Sbjct: 178 DGKFTSKSDVWSFGVLLWEIFTLGEQP 204
|
Length = 258 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 3e-37
Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 10/192 (5%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQLLGYC 726
+G GGF T + K VA+K + + E E+E L + H N+V+L G
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 727 SVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPYIIHM 785
LV EY GSL D L+ L + +I G+ +LH +G IIH
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG----IIHR 116
Query: 786 DIKTSNILL-NDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE-YGQAGRANERG 843
D+K NILL +D + K++DFGL++L++ + + T Y+ E G +E+
Sbjct: 117 DLKPENILLDSDNGKVKLADFGLSKLLTS-DKSLLKTIVGTPAYMAPEVLLGKGYYSEKS 175
Query: 844 DIYSFGVILLEL 855
DI+S GVIL EL
Sbjct: 176 DIWSLGVILYEL 187
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 4e-36
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 667 NVIGGGGFRTAFKGTM---PDQKT-VAVKKL-SQATGQCDREFAAEMETLDMVKHQNLVQ 721
+G G F +KG + + T VAVK L A+ + ++F E + + H N+V+
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNR--------AASLDWGKRCKIAYGAARGISF 773
LLG C+ E LV EYM G L D+LR ++L A A+G+ +
Sbjct: 61 LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120
Query: 774 LHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IGYVPSE 832
L K +H D+ N L+ + K+SDFGL+R + D + + I ++ E
Sbjct: 121 LAS--KK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPE 177
Query: 833 YGQAGRANERGDIYSFGVILLELVT-GKQP 861
+ G + D++SFGV+L E+ T G P
Sbjct: 178 SLKDGIFTSKSDVWSFGVLLWEIFTLGATP 207
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 2e-33
Identities = 70/205 (34%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKL--SQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
+G G F T +K K VAVK L + D+ E+ L + H N+V+L+
Sbjct: 6 KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPYII 783
+ LV EY G L D+L R L + KIA RG+ +LH +G II
Sbjct: 66 AFEDKDHLYLVMEYCEGGDLFDYLS-RGGPLSEDEAKKIALQILRGLEYLHSNG----II 120
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE-------YGQA 836
H D+K NILL++ K++DFGLA+ + S T T Y+ E YG
Sbjct: 121 HRDLKPENILLDENGVVKIADFGLAKKLL-KSSSSLTTFVGTPWYMAPEVLLGGNGYGP- 178
Query: 837 GRANERGDIYSFGVILLELVTGKQP 861
+ D++S GVIL EL+TGK P
Sbjct: 179 -----KVDVWSLGVILYELLTGKPP 198
|
Length = 260 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 2e-31
Identities = 64/209 (30%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 665 FENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFA-AEMETLDMVKHQNLVQL 722
+G G F + K VA+K + + + DRE E++ L +KH N+V+L
Sbjct: 3 ILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRL 62
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPY 781
++ LV EY G L D L+ R L + + +LH G
Sbjct: 63 YDVFEDEDKLYLVMEYCEGGDLFDLLKKRG-RLSEDEARFYLRQILSALEYLHSKG---- 117
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
I+H D+K NILL++ K++DFGLAR + T T Y+ E +
Sbjct: 118 IVHRDLKPENILLDEDGHVKLADFGLARQLDP--GEKLTTFVGTPEYMAPEVLLGKGYGK 175
Query: 842 RGDIYSFGVILLELVTGKQPTGPEFEDKD 870
DI+S GVIL EL+TGK P F D
Sbjct: 176 AVDIWSLGVILYELLTGKPP----FPGDD 200
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 9e-29
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 28/215 (13%)
Query: 663 IVFENVIGGGGFRTAFKGTM--PDQK--TVAVKKL-SQATGQCDREFAAEMETLDMVKHQ 717
+ E VIGGG F +G + P +K VA+K L + ++ + +F E + H
Sbjct: 6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHP 65
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-HH 776
N+++L G + +++ EYM NGSLD +LR G+ + G A G+ +L
Sbjct: 66 NIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM 125
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD--------TA-DTIG 827
+ +H D+ NIL+N KVSDFGL+R + D E+ +T TA + I
Sbjct: 126 NY----VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIA 181
Query: 828 YVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
Y ++ A D++SFG+++ E+++ G++P
Sbjct: 182 Y--RKFTSA------SDVWSFGIVMWEVMSYGERP 208
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 2e-27
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 18/206 (8%)
Query: 664 VFENV--IGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLV 720
+FE + IG GGF +K K VA+K + + + + E++ L KH N+V
Sbjct: 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIV 60
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAY---GAARGISFLH-H 776
+ G +E +V E+ GSL D L++ +L +IAY +G+ +LH +
Sbjct: 61 KYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLT---ESQIAYVCKELLKGLEYLHSN 117
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGYVPSEYGQ 835
G IIH DIK +NILL E K+ DFGL+ + + +T T ++ E
Sbjct: 118 G----IIHRDIKAANILLTSDGEVKLIDFGLS---AQLSDTKARNTMVGTPYWMAPEVIN 170
Query: 836 AGRANERGDIYSFGVILLELVTGKQP 861
+ + DI+S G+ +EL GK P
Sbjct: 171 GKPYDYKADIWSLGITAIELAEGKPP 196
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 1e-25
Identities = 69/207 (33%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQ 721
+ E +G G F + GT VAVK L T E F E + + ++H LVQ
Sbjct: 8 LKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT--MSPEAFLQEAQIMKKLRHDKLVQ 65
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKI------AYGAARGISFLH 775
L CS E +V EYM GSL D+L++ GK+ ++ A A G+++L
Sbjct: 66 LYAVCSEEEPIYIVTEYMSKGSLLDFLKS-----GEGKKLRLPQLVDMAAQIAEGMAYLE 120
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQ 835
IH D+ NIL+ + K++DFGLARLI D E I + E
Sbjct: 121 ---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAAN 177
Query: 836 AGRANERGDIYSFGVILLELVT-GKQP 861
GR + D++SFG++L E+VT G+ P
Sbjct: 178 YGRFTIKSDVWSFGILLTEIVTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 5e-25
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV 728
+G G F ++G + VAVK L T +F AE + + ++H L+QL C++
Sbjct: 14 LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPK-DFLAEAQIMKKLRHPKLIQLYAVCTL 72
Query: 729 GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKI------AYGAARGISFLH-HGFKPY 781
E +V E M GSL ++L+ A G+ K+ A A G+++L +
Sbjct: 73 EEPIYIVTELMKYGSLLEYLQGGA-----GRALKLPQLIDMAAQVASGMAYLEAQNY--- 124
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
IH D+ N+L+ + KV+DFGLAR+I + I + E R +
Sbjct: 125 -IHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSI 183
Query: 842 RGDIYSFGVILLELVT-GKQP----TGPE 865
+ D++SFG++L E+VT G+ P T E
Sbjct: 184 KSDVWSFGILLTEIVTYGRMPYPGMTNAE 212
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 8e-25
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 6/198 (3%)
Query: 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGY 725
E +G G F ++G ++ VA+K L ++F E++ L ++H++L+ L
Sbjct: 11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAV 70
Query: 726 CSVGEEKLLVYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIH 784
CSVGE ++ E M GSL +LR+ L +A A G+++L + IH
Sbjct: 71 CSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIH 127
Query: 785 MDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGD 844
D+ NIL+ + KV+DFGLARLI + + ++S+D + E G + + D
Sbjct: 128 RDLAARNILVGEDLVCKVADFGLARLIKE-DVYLSSDKKIPYKWTAPEAASHGTFSTKSD 186
Query: 845 IYSFGVILLELVT-GKQP 861
++SFG++L E+ T G+ P
Sbjct: 187 VWSFGILLYEMFTYGQVP 204
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 2e-24
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCD--REFAAEMETLDMVKHQNLVQLLG 724
V+G G +K P K A+KK+ G + ++ E++TL + +V+ G
Sbjct: 8 VLGQGSSGVVYKVRHKPTGKIYALKKI-HVDGDEEFRKQLLRELKTLRSCESPYVVKCYG 66
Query: 725 -YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRC--KIAYGAARGISFLHHGFKPY 781
+ GE + V EYM GSL D L+ + IA +G+ +LH
Sbjct: 67 AFYKEGEISI-VLEYMDGGSLADLLKKVGK---IPEPVLAYIARQILKGLDYLHTKRH-- 120
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISD----CESHVSTDTADTIGYVPSEYGQAG 837
IIH DIK SN+L+N E K++DFG+++++ + C + V T T Y+ E Q
Sbjct: 121 IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVT-----YMSPERIQGE 175
Query: 838 RANERGDIYSFGVILLELVTGKQP 861
+ DI+S G+ LLE GK P
Sbjct: 176 SYSYAADIWSLGLTLLECALGKFP 199
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 6e-24
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 657 VLVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH 716
+ + IG G F G QK VAVK L + F AE + ++H
Sbjct: 2 AINSKELKLGATIGKGEFGDVMLGDYRGQK-VAVKCLKDDSTAAQ-AFLAEASVMTTLRH 59
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLH 775
NLVQLLG G +V EYM GSL D+LR+R A + ++ A G+ +L
Sbjct: 60 PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE 119
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD-TIGYVPSEYG 834
+ +H D+ N+L+++ AKVSDFGLA+ E+ D+ + + E
Sbjct: 120 ---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAK-----EASQGQDSGKLPVKWTAPEAL 171
Query: 835 QAGRANERGDIYSFGVILLEL 855
+ + + + D++SFG++L E+
Sbjct: 172 REKKFSTKSDVWSFGILLWEI 192
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 99.4 bits (248), Expect = 6e-23
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 25/221 (11%)
Query: 663 IVFENVIGGGGFRTAFKGTM----PDQKT--VAVKKLSQATGQCDRE-FAAEMETLDMVK 715
IV + +G G F F G P+ VAVK L + R+ F E E L +
Sbjct: 7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQ 66
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR---AASLDWGKR----------CK 762
H+N+V+ G C+ G+ ++V+EYM +G L+ +LR+ AA L +
Sbjct: 67 HENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQ 126
Query: 763 IAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH-VSTD 821
IA A G+ +L + +H D+ T N L+ K+ DFG++R + + + V
Sbjct: 127 IAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGH 183
Query: 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
T I ++P E + D++SFGV+L E+ T GKQP
Sbjct: 184 TMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQP 224
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 98.8 bits (247), Expect = 6e-23
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 667 NVIGGGGFRTAFKGTMPDQ-KTVAVKK--LSQATGQCDREFAAEMETLDMVKHQNLVQLL 723
++G G F + + D + +AVK LS + + E+ L ++H N+V+
Sbjct: 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65
Query: 724 GYCSVGEEKLLVY---EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFK 779
G EEK + EY+ GSL L + L K G+++LH +G
Sbjct: 66 G-SERDEEKNTLNIFLEYVSGGSLSS-LLKKFGKLPEPVIRKYTRQILEGLAYLHSNG-- 121
Query: 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD-CESHVSTDTADTIGYVPSEYGQAGR 838
I+H DIK +NIL++ K++DFG A+ + D + T ++ E +
Sbjct: 122 --IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEE 179
Query: 839 ANERGDIYSFGVILLELVTGKQP 861
DI+S G ++E+ TGK P
Sbjct: 180 YGRAADIWSLGCTVIEMATGKPP 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 99.3 bits (247), Expect = 6e-23
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 25/221 (11%)
Query: 663 IVFENVIGGGGFRTAF----KGTMPDQKT--VAVKKLSQATGQCDREFAAEMETLDMVKH 716
IV + +G G F F +P+Q VAVK L +A+ ++F E E L +++H
Sbjct: 7 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQH 66
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRA--------------ASLDWGKRCK 762
Q++V+ G C+ G L+V+EYM +G L+ +LR+ L G+
Sbjct: 67 QHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLA 126
Query: 763 IAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH-VSTD 821
IA A G+ +L + +H D+ T N L+ K+ DFG++R I + + V
Sbjct: 127 IASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 183
Query: 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
T I ++P E + DI+SFGV+L E+ T GKQP
Sbjct: 184 TMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQP 224
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 98.3 bits (245), Expect = 9e-23
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 11/213 (5%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV 728
+G G F G + VA+K + + D +F E + + + H NLVQL G C+
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMIREGAMSED-DFIEEAKVMMKLSHPNLVQLYGVCTK 70
Query: 729 GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPYIIHMDI 787
+V EYM NG L ++LR R L + + +L +GF IH D+
Sbjct: 71 QRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGF----IHRDL 126
Query: 788 KTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYS 847
N L+ + KVSDFGLAR + D + S T + + P E R + + D++S
Sbjct: 127 AARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWS 186
Query: 848 FGVILLELVT-GKQPTGPEFEDKDGGNLVDWVL 879
FGV++ E+ + GK P +E +V+ V
Sbjct: 187 FGVLMWEVFSEGKMP----YERFSNSEVVESVS 215
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 96.5 bits (240), Expect = 4e-22
Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV 728
+G G F + G VA+K L Q + + F AE + ++H LV+L Y V
Sbjct: 14 LGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPE-AFLAEANLMKQLQHPRLVRL--YAVV 70
Query: 729 GEEKL-LVYEYMVNGSLDDWLRNRAAS-LDWGKRCKIAYGAARGISFLHHGFKPYIIHMD 786
+E + ++ EYM NGSL D+L+ L K +A A G++F+ K YI H D
Sbjct: 71 TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER--KNYI-HRD 127
Query: 787 IKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIY 846
++ +NIL+++ K++DFGLARLI D E I + E G + D++
Sbjct: 128 LRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 187
Query: 847 SFGVILLELVT-GKQP----TGPE 865
SFG++L E+VT G+ P T PE
Sbjct: 188 SFGILLTEIVTYGRIPYPGMTNPE 211
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 95.5 bits (237), Expect = 8e-22
Identities = 68/196 (34%), Positives = 100/196 (51%), Gaps = 9/196 (4%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV 728
+G G F + GT VAVK L T F E + + ++H LVQL Y V
Sbjct: 14 LGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQL--YAVV 70
Query: 729 GEEKL-LVYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMD 786
EE + +V EYM GSL D+L++ +L +A A G++++ + IH D
Sbjct: 71 SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRD 127
Query: 787 IKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIY 846
++++NIL+ D K++DFGLARLI D E I + E GR + D++
Sbjct: 128 LRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 187
Query: 847 SFGVILLELVT-GKQP 861
SFG++L ELVT G+ P
Sbjct: 188 SFGILLTELVTKGRVP 203
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 95.5 bits (237), Expect = 8e-22
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 9/200 (4%)
Query: 665 FENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
E +G G F + GT VA+K L T F E + + ++H+ LVQL
Sbjct: 10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL-- 66
Query: 725 YCSVGEEKL-LVYEYMVNGSLDDWLRNRAAS-LDWGKRCKIAYGAARGISFLHHGFKPYI 782
Y V EE + +V EYM GSL D+L+ L + +A A G++++ +
Sbjct: 67 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 123
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER 842
+H D++ +NIL+ + KV+DFGLARLI D E I + E GR +
Sbjct: 124 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 183
Query: 843 GDIYSFGVILLELVT-GKQP 861
D++SFG++L EL T G+ P
Sbjct: 184 SDVWSFGILLTELTTKGRVP 203
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 97.9 bits (242), Expect = 1e-21
Identities = 68/233 (29%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 668 VIGGGGFRTAFKGTMPDQKTVAVKKLSQA---TGQCDREFAAEMETLDMVKHQ-NLVQLL 723
+G G F + D+K VA+K L++ + F E++ L + H N+V+L
Sbjct: 7 KLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLY 64
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNR--AASLDWGKRCKIAYGAARGISFLHHGFKPY 781
+ LV EY+ GSL+D L+ L + I + +LH
Sbjct: 65 DFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKG 121
Query: 782 IIHMDIKTSNILLN-DYFEAKVSDFGLARLISDCESHVSTDTAD-----TIGYVPSEY-- 833
IIH DIK NILL+ D K+ DFGLA+L+ D S S T GY+ E
Sbjct: 122 IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLL 181
Query: 834 -GQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMKKE 885
A+ DI+S G+ L EL+TG P FE + + L ++ +
Sbjct: 182 GLSLAYASSSSDIWSLGITLYELLTGLPP----FEGEKNSSATSQTLKIILEL 230
|
Length = 384 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 93.8 bits (233), Expect = 4e-21
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 663 IVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ 721
I ++ +GGG + ++G TVAVK L + T + + EF E + +KH NLVQ
Sbjct: 8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 66
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
LLG C+ ++ E+M G+L D+LR ++ +A + + +L K
Sbjct: 67 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KK 123
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-----IGYVPSEYGQ 835
IH D+ N L+ + KV+DFGL+RL++ T TA I + E
Sbjct: 124 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-----DTYTAHAGAKFPIKWTAPESLA 178
Query: 836 AGRANERGDIYSFGVILLELVT 857
+ + + D+++FGV+L E+ T
Sbjct: 179 YNKFSIKSDVWAFGVLLWEIAT 200
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 93.1 bits (231), Expect = 6e-21
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV 728
IG G F + G +++ VA+K + + + +F E + + + H LVQL G C+
Sbjct: 12 IGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTE 70
Query: 729 GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIK 788
LV+E+M +G L D+LR + + G+++L +IH D+
Sbjct: 71 RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLA 127
Query: 789 TSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSF 848
N L+ + KVSDFG+ R + D + ST T + + E + + + D++SF
Sbjct: 128 ARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSF 187
Query: 849 GVILLELVT-GKQPTGPEFEDKDGGNLVD 876
GV++ E+ + GK P +E++ +V+
Sbjct: 188 GVLMWEVFSEGKTP----YENRSNSEVVE 212
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 93.2 bits (232), Expect = 7e-21
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 668 VIGGGGFRTAFKGT-MPDQKT----VAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQ 721
V+G G F T +KG +P+ + VA+K L + T + ++E E + V H ++V+
Sbjct: 14 VLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVR 73
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLD------WGKRCKIAYGAARGISFL- 774
LLG C + + L+ + M G L D++RN ++ W + A+G+S+L
Sbjct: 74 LLGIC-LSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQI------AKGMSYLE 126
Query: 775 -HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IGYVPSE 832
++H D+ N+L+ K++DFGLA+L+ E + I ++ E
Sbjct: 127 EKR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALE 181
Query: 833 YGQAGRANERGDIYSFGVILLELVT-GKQP 861
+ D++S+GV + EL+T G +P
Sbjct: 182 SILHRIYTHKSDVWSYGVTVWELMTFGAKP 211
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 92.3 bits (229), Expect = 1e-20
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 7/201 (3%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ F +G G F G Q VA+K + + + D EF E + + + H+ LVQL
Sbjct: 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMKLSHEKLVQL 64
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPY 781
G C+ +V EYM NG L ++LR + ++ G+++L F
Sbjct: 65 YGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQF--- 121
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
IH D+ N L++D KVSDFGL+R + D E S + + + P E + +
Sbjct: 122 -IHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSS 180
Query: 842 RGDIYSFGVILLELVT-GKQP 861
+ D+++FGV++ E+ + GK P
Sbjct: 181 KSDVWAFGVLMWEVYSLGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 92.3 bits (229), Expect = 1e-20
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 17/210 (8%)
Query: 663 IVFENVIGGGGFRTAFKGT--MPDQK--TVAVKKLSQATGQCDR-EFAAEMETLDMVKHQ 717
I + VIG G F F+G MP +K VA+K L + R +F +E + H
Sbjct: 7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHH 66
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
N+++L G + + +++ EYM NG+LD +LR+ + + G A G+ +L
Sbjct: 67 NIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS-- 124
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG 837
+H D+ NIL+N E KVSDFGL+R++ D T + G +P +
Sbjct: 125 -DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSG---GKIPIRWTAPE 180
Query: 838 RANER-----GDIYSFGVILLELVT-GKQP 861
R D++SFG+++ E+++ G++P
Sbjct: 181 AIAYRKFTSASDVWSFGIVMWEVMSFGERP 210
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 91.8 bits (228), Expect = 2e-20
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQLLGYCS 727
IG G F +KG + VAVK + F E E L H N+V+L+G C
Sbjct: 3 IGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV 62
Query: 728 VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDI 787
+ +V E + GSL +LR + L K +++ AA G+ +L IH D+
Sbjct: 63 QKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDL 119
Query: 788 KTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IGYVPSEYGQAGRANERGDIY 846
N L+ + K+SDFG++R VS I + E GR D++
Sbjct: 120 AARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVW 179
Query: 847 SFGVILLELVTG 858
S+G++L E +
Sbjct: 180 SYGILLWETFSL 191
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 92.5 bits (230), Expect = 2e-20
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 31/225 (13%)
Query: 663 IVFENVIGGGGFRTAFKG--TMPDQK----TVAVKKLSQ-ATGQCDREFAAEMETLDMVK 715
+ F +G G F +KG T P+++ +VA+K L + A + +EF E E + ++
Sbjct: 7 VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ 66
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRA---------------ASLDWGKR 760
H N+V LLG C+ + +++EY+ +G L ++L + +SLD
Sbjct: 67 HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDF 126
Query: 761 CKIAYGAARGISFL--HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH- 817
IA A G+ +L HH +H D+ N L+ + K+SDFGL+R I + +
Sbjct: 127 LHIAIQIAAGMEYLSSHH-----FVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYR 181
Query: 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
V + + + ++P E G+ DI+SFGV+L E+ + G QP
Sbjct: 182 VQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQP 226
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 91.8 bits (228), Expect = 3e-20
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 33/229 (14%)
Query: 663 IVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQ-ATGQCDREFAAEMETLDMVK 715
I + IG G F F+ P VAVK L + A+ +F E +
Sbjct: 7 IEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD 66
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAA-----SLDWGKRCK-------- 762
H N+V+LLG C+VG+ L++EYM G L+++LR+R+ +
Sbjct: 67 HPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLP 126
Query: 763 --------IAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814
IA A G+++L + +H D+ T N L+ + K++DFGL+R I
Sbjct: 127 LSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 183
Query: 815 ESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
+ + S + A I ++P E R D++++GV+L E+ + G QP
Sbjct: 184 DYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQP 232
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 90.9 bits (226), Expect = 7e-20
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 41/220 (18%)
Query: 669 IGGGGFRTAFKGT------MPDQKTVAVKKLSQATGQCDREFA---AEMETLDMV-KHQN 718
+G G F K + TVAVK L +++ + +EME + M+ KH+N
Sbjct: 20 LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKN 77
Query: 719 LVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR-----AASLDWGK------RCK----I 763
++ LLG C+ +V EY +G+L D+LR R AS D + K
Sbjct: 78 IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSF 137
Query: 764 AYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA 823
AY ARG+ FL IH D+ N+L+ + K++DFGLAR I + + T
Sbjct: 138 AYQVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKT--- 191
Query: 824 DTIGYVPSEYGQAGRA------NERGDIYSFGVILLELVT 857
T G +P ++ A A + D++SFGV+L E+ T
Sbjct: 192 -TNGRLPVKW-MAPEALFDRVYTHQSDVWSFGVLLWEIFT 229
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 89.7 bits (222), Expect = 8e-20
Identities = 65/196 (33%), Positives = 97/196 (49%), Gaps = 9/196 (4%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV 728
+G G F + GT VA+K L T F E + + ++H LV L Y V
Sbjct: 14 LGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPL--YAVV 70
Query: 729 GEEKL-LVYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMD 786
EE + +V E+M GSL D+L+ L + +A A G++++ + IH D
Sbjct: 71 SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRD 127
Query: 787 IKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIY 846
++ +NIL+ D K++DFGLARLI D E I + E GR + D++
Sbjct: 128 LRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 187
Query: 847 SFGVILLELVT-GKQP 861
SFG++L ELVT G+ P
Sbjct: 188 SFGILLTELVTKGRVP 203
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 90.1 bits (223), Expect = 1e-19
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 663 IVFENVIGGGGFRTAFKGTM----PDQKT--VAVKKLSQATGQCDREFAAEMETLDMVKH 716
IV + +G G F F P+Q VAVK L A+ ++F E E L ++H
Sbjct: 7 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH 66
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLR------------NRAASLDWGKRCKIA 764
+++V+ G C G+ ++V+EYM +G L+ +LR NR A L + IA
Sbjct: 67 EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIA 126
Query: 765 YGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH-VSTDTA 823
A G+ +L + +H D+ T N L+ + K+ DFG++R + + + V T
Sbjct: 127 QQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTM 183
Query: 824 DTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
I ++P E + D++S GV+L E+ T GKQP
Sbjct: 184 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 1e-19
Identities = 62/175 (35%), Positives = 94/175 (53%), Gaps = 9/175 (5%)
Query: 688 VAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYC-SVGEEKL-LVYEYMVNGSLD 745
VAVKKL +T + R+F E+E L ++H N+V+ G C S G L LV EY+ GSL
Sbjct: 36 VAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLR 95
Query: 746 DWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDF 805
D+L+ LD K A +G+ +L G K Y +H D+ T NIL+ K+ DF
Sbjct: 96 DYLQKHRERLDHRKLLLYASQICKGMEYL--GSKRY-VHRDLATRNILVESENRVKIGDF 152
Query: 806 GLARLI-SDCESHVSTDTADT--IGYVPSEYGQAGRANERGDIYSFGVILLELVT 857
GL +++ D E + + ++ Y P ++ + + D++SFGV+L EL T
Sbjct: 153 GLTKVLPQDKEYYKVREPGESPIFWYAPESLTES-KFSVASDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 88.9 bits (220), Expect = 2e-19
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 6/195 (3%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV 728
+G G F + G + VAVK L T + F E + ++H LV+L +
Sbjct: 14 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLYAVVTK 72
Query: 729 GEEKLLVYEYMVNGSLDDWLRNRAAS-LDWGKRCKIAYGAARGISFLHHGFKPYIIHMDI 787
E ++ EYM GSL D+L++ + K + A G++++ K YI H D+
Sbjct: 73 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER--KNYI-HRDL 129
Query: 788 KTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYS 847
+ +N+L+++ K++DFGLAR+I D E I + E G + D++S
Sbjct: 130 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 189
Query: 848 FGVILLELVT-GKQP 861
FG++L E+VT GK P
Sbjct: 190 FGILLYEIVTYGKIP 204
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 88.8 bits (220), Expect = 2e-19
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 9/217 (4%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ F +G G F G Q VA+K +++ + +F E + + + H LVQL
Sbjct: 6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQL 64
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
G C+ + +V E+M NG L ++LR R L + G+ +L +
Sbjct: 65 YGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE---RNSF 121
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER 842
IH D+ N L++ KVSDFG+ R + D E S+ + + P E + + +
Sbjct: 122 IHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSK 181
Query: 843 GDIYSFGVILLELVT-GKQPTGPEFEDKDGGNLVDWV 878
D++SFGV++ E+ T GK P FE K +V+ +
Sbjct: 182 SDVWSFGVLMWEVFTEGKMP----FEKKSNYEVVEMI 214
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 87.5 bits (217), Expect = 7e-19
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 665 FENVIGGGGFRTAFKGTM--PDQKT---VAVKKLSQATG-QCDREFAAEMETLDMVKHQN 718
F +G G F T VAVK L+ + Q +F E+E L + H+N
Sbjct: 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHEN 67
Query: 719 LVQLLGYC--SVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH 776
+V+ G C G L+ EY+ +GSL D+L+ ++ + + +G+ +L
Sbjct: 68 IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS 127
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS-DCESHVSTDTADT--IGYVPSEY 833
+ YI H D+ NIL+ K+SDFGLA+++ D + + + ++ Y P E
Sbjct: 128 --QRYI-HRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAP-EC 183
Query: 834 GQAGRANERGDIYSFGVILLELVT 857
+ + + D++SFGV L EL T
Sbjct: 184 LRTSKFSSASDVWSFGVTLYELFT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 87.4 bits (216), Expect = 9e-19
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 26/222 (11%)
Query: 663 IVFENVIGGGGFRTAFKGT------MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH 716
IV + +G G F F D+ VAVK L T ++F E E L ++H
Sbjct: 7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH 66
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRA---------------ASLDWGKRC 761
+++V+ G C G+ ++V+EYM +G L+ +LR L +
Sbjct: 67 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 126
Query: 762 KIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH-VST 820
IA A G+ +L + +H D+ T N L+ K+ DFG++R + + + V
Sbjct: 127 HIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGG 183
Query: 821 DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
T I ++P E + D++SFGVIL E+ T GKQP
Sbjct: 184 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 225
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 85.7 bits (212), Expect = 2e-18
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 13/208 (6%)
Query: 663 IVFENVIGGGGFRTAFKGTM--PDQKTVAVKKLSQATGQCD---REFAAEMETLDMVKHQ 717
I E VIG G F G + P ++ + V + G + R+F +E + H
Sbjct: 6 IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHP 65
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH- 776
N++ L G + + ++V EYM NGSLD +LR + + G A G+ +L
Sbjct: 66 NIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM 125
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG--YVPSEYG 834
G+ +H D+ NIL+N KVSDFGL+R++ D T I + E
Sbjct: 126 GY----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 181
Query: 835 QAGRANERGDIYSFGVILLELVT-GKQP 861
+ D++S+G+++ E+++ G++P
Sbjct: 182 AYRKFTSASDVWSYGIVMWEVMSYGERP 209
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 84.3 bits (208), Expect = 5e-18
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 21/204 (10%)
Query: 665 FENVIGGGGFRTAFKGTMPDQKTVAVKKL-SQATGQCDREFAAEMETLDMVKHQNLVQLL 723
IG G F G K VAVK + + AT Q F AE + ++H NLVQLL
Sbjct: 10 LLQTIGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLL 65
Query: 724 GYCSVGEEK---LLVYEYMVNGSLDDWLRNRAASLDWGKR-CKIAYGAARGISFLHHGFK 779
G + EEK +V EYM GSL D+LR+R S+ G K + + +L
Sbjct: 66 GV--IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN-- 121
Query: 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD-TIGYVPSEYGQAGR 838
+H D+ N+L+++ AKVSDFGL + E+ + DT + + E + +
Sbjct: 122 -NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKK 175
Query: 839 ANERGDIYSFGVILLELVT-GKQP 861
+ + D++SFG++L E+ + G+ P
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGRVP 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 83.9 bits (208), Expect = 8e-18
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 683 PDQKTVAVKK-LSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741
P K +AVK + ++ E++ L +V G + + EYM
Sbjct: 24 PTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDG 83
Query: 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAK 801
GSLD L+ + KIA +G+++LH K IIH D+K SNIL+N + K
Sbjct: 84 GSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNSRGQIK 141
Query: 802 VSDFGLA-RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQ 860
+ DFG++ +L++ ++ T Y+ E Q + + DI+S G+ L+EL TG+
Sbjct: 142 LCDFGVSGQLVNS----LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRF 197
Query: 861 PTGPEFEDKDG 871
P PE + DG
Sbjct: 198 PYPPENDPPDG 208
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 2e-17
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 668 VIGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYC 726
V+G G + + + Q +A+K++ + + + E+ +KH+N+VQ LG
Sbjct: 15 VLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD 74
Query: 727 SVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAA--RGISFLHHGFKPYIIH 784
S + E + GSL LR++ L ++ I Y G+ +LH I+H
Sbjct: 75 SENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVH 131
Query: 785 MDIKTSNILLNDYFEA-KVSDFGLARLISDCESHVSTDTADTIGYVPSE---YGQAGRAN 840
DIK N+L+N Y K+SDFG ++ ++ T T T+ Y+ E G G
Sbjct: 132 RDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTG-TLQYMAPEVIDKGPRGYGA 190
Query: 841 ERGDIYSFGVILLELVTGKQP 861
DI+S G ++E+ TGK P
Sbjct: 191 P-ADIWSLGCTIVEMATGKPP 210
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 4e-17
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTV-AVKKLSQATGQCD--REFAAEMETLDMVKHQNLVQLL 723
N IGGG F + D + AVK++ +E A EM+ L+++KH NLV+
Sbjct: 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65
Query: 724 GYCSVGEEKLLVY-EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAA--RGISFLH-HGFK 779
G V EK+ ++ EY G+L++ L + LD + Y G+++LH HG
Sbjct: 66 G-VEVHREKVYIFMEYCSGGTLEELLEH-GRILD--EHVIRVYTLQLLEGLAYLHSHG-- 119
Query: 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG---YVPSEYGQA 836
I+H DIK +NI L+ K+ DFG A + + + + + G Y+ E
Sbjct: 120 --IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITG 177
Query: 837 GRANERG---DIYSFGVILLELVTGKQP 861
G+ G DI+S G ++LE+ TGK+P
Sbjct: 178 GKGKGHGRAADIWSLGCVVLEMATGKRP 205
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 81.2 bits (200), Expect = 5e-17
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Query: 668 VIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYC 726
++G G F FKGT+ D+ VAVK + Q +F +E L H N+V+L+G C
Sbjct: 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61
Query: 727 SVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMD 786
+ + +V E + G +LR + L + K A AA G+++L IH D
Sbjct: 62 TQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLE---SKNCIHRD 118
Query: 787 IKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIY 846
+ N L+ + K+SDFG++R D S I + E GR + D++
Sbjct: 119 LAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVW 178
Query: 847 SFGVILLE 854
S+G++L E
Sbjct: 179 SYGILLWE 186
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 81.5 bits (201), Expect = 6e-17
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 15/213 (7%)
Query: 660 IAIIVFENVIGGGGFRTAFKGTM--PDQK--TVAVKKLSQA-TGQCDREFAAEMETLDMV 714
++ + E VIG G F +G + P ++ VA+K L T + R+F +E +
Sbjct: 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF 62
Query: 715 KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
H N++ L G + +++ E+M NG+LD +LR + + G A G+ +L
Sbjct: 63 DHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 122
Query: 775 HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP---- 830
+ +H D+ NIL+N KVSDFGL+R + D S T T+ G +P
Sbjct: 123 S---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD-PTYTSSLGGKIPIRWT 178
Query: 831 -SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
E + D++S+G+++ E+++ G++P
Sbjct: 179 APEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 211
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 7e-17
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYC 726
IG G +K T K VA+KK+ Q E+ + KH N+V
Sbjct: 26 KIGEGASGEVYKATDRATGKEVAIKKMR-LRKQNKELIINEILIMKDCKHPNIVDYYDSY 84
Query: 727 SVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAA---RGISFLHHGFKPYII 783
VG+E +V EYM GSL D + + +IAY +G+ +LH +I
Sbjct: 85 LVGDELWVVMEYMDGGSLTDIITQNFVRM---NEPQIAYVCREVLQGLEYLH---SQNVI 138
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERG 843
H DIK+ NILL+ K++DFG A ++ +S ++ T ++ E + +
Sbjct: 139 HRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNS-VVGTPYWMAPEVIKRKDYGPKV 197
Query: 844 DIYSFGVILLELVTGKQP 861
DI+S G++ +E+ G+ P
Sbjct: 198 DIWSLGIMCIEMAEGEPP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 1e-16
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 19/210 (9%)
Query: 668 VIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLV 720
+G G F F + V VK L + + EF E++ + H+N+V
Sbjct: 12 TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVV 71
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGK--------RCKIAYGAARGIS 772
+LLG C E ++ EY G L +LR + + K + + A G+
Sbjct: 72 RLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMD 131
Query: 773 FLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE 832
L +H D+ N L++ E KVS L++ + + E + + + ++ E
Sbjct: 132 HL---SNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPE 188
Query: 833 YGQAGRANERGDIYSFGVILLELVT-GKQP 861
Q + + D++SFGV++ E+ T G+ P
Sbjct: 189 AVQEDDFSTKSDVWSFGVLMWEVFTQGELP 218
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 80.8 bits (199), Expect = 2e-16
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 27/228 (11%)
Query: 658 LVIAIIVFENVIGGGGFRTAFKG-----TMPDQKTVAVKKLSQ-ATGQCDREFAAEMETL 711
L ++ + F +G F +KG M + VA+K L Q EF E +
Sbjct: 2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLM 61
Query: 712 DMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRA----------------ASL 755
+ H N+V LLG + + +++EY+ G L ++L R+ +SL
Sbjct: 62 AELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSL 121
Query: 756 DWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815
D G IA A G+ +L F +H D+ NIL+ + K+SD GL+R I +
Sbjct: 122 DHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSAD 178
Query: 816 SH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
+ V + I ++P E G+ + DI+SFGV+L E+ + G QP
Sbjct: 179 YYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQP 226
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 2e-16
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 35/218 (16%)
Query: 669 IGGGGFRTAFKGT--MPD--QKTVAVKKLSQATGQCD-REFAAEMETLDMVKHQNLVQLL 723
+G G F + KG M + VAVK L Q +EF E + + H +V+L+
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNR-----AASLDWGKRCKIAYGAARGISFLHHGF 778
G C GE +LV E G L +L+ R + + A+ A G+++L
Sbjct: 63 GVC-KGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKEL------AHQVAMGMAYLE--- 112
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG------YVPSE 832
+ +H D+ N+LL + +AK+SDFG++R + + A T G Y P E
Sbjct: 113 SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY---RATTAGRWPLKWYAP-E 168
Query: 833 YGQAGRANERGDIYSFGVILLELVT-GKQP----TGPE 865
G+ + + D++S+GV L E + G +P G E
Sbjct: 169 CINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE 206
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 80.4 bits (198), Expect = 3e-16
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 35/220 (15%)
Query: 663 IVFENVIGGGGFRTAFKGTMPD---QKTVAVKKLSQATGQCD-REFAAEMETL-DMVKHQ 717
I F++VIG G F K + + A+K++ + + D R+FA E+E L + H
Sbjct: 9 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 68
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLR--------------NRAAS-LDWGKRCK 762
N++ LLG C L EY +G+L D+LR N AS L +
Sbjct: 69 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 128
Query: 763 IAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT 822
A ARG+ +L + IH D+ NIL+ + + AK++DFGL+R E +V
Sbjct: 129 FAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK-- 180
Query: 823 ADTIGYVPSEYGQAGRAN-----ERGDIYSFGVILLELVT 857
T+G +P + N D++S+GV+L E+V+
Sbjct: 181 --TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 218
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 78.9 bits (195), Expect = 4e-16
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 17/208 (8%)
Query: 665 FENVIGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDREFAA-EMETLDMVKHQNLVQL 722
VIG G + +P+ + VA+K++ Q + E++ + H N+V+
Sbjct: 5 LIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKY 64
Query: 723 LGYCS--VGEEKLLVYEYMVNGSLDDWLR--NRAASLDWGKRCKIAYGAARGISFLH-HG 777
Y S VG+E LV Y+ GSL D ++ LD + +G+ +LH +G
Sbjct: 65 --YTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG 122
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS---DCESHVSTDTADTIGYVPSEYG 834
IH DIK NILL + K++DFG++ ++ D V T ++ E
Sbjct: 123 ----QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVM 178
Query: 835 QAGRA-NERGDIYSFGVILLELVTGKQP 861
+ + + DI+SFG+ +EL TG P
Sbjct: 179 EQVHGYDFKADIWSFGITAIELATGAAP 206
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 80.1 bits (197), Expect = 4e-16
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 30/198 (15%)
Query: 687 TVAVKKLSQ-ATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYMVNGSL 744
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ ++ EY G+L
Sbjct: 46 TVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNL 105
Query: 745 DDWLR-NRAASLDWG-KRCKI-------------AYGAARGISFLHHGFKPYIIHMDIKT 789
++LR R +D+ CK+ AY ARG+ +L IH D+
Sbjct: 106 REYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAA 162
Query: 790 SNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER-----GD 844
N+L+ + K++DFGLAR + + + + T T G +P ++ +R D
Sbjct: 163 RNVLVTEDNVMKIADFGLARDVHNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSD 218
Query: 845 IYSFGVILLELVT-GKQP 861
++SFGV+L E+ T G P
Sbjct: 219 VWSFGVLLWEIFTLGGSP 236
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 78.5 bits (193), Expect = 6e-16
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 19/199 (9%)
Query: 668 VIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCD---REFAAEMETLDMVKHQNLVQLLG 724
+IG G F +G QK VAVK + +CD + F E + + H+NLV+LLG
Sbjct: 13 IIGEGEFGAVLQGEYTGQK-VAVKNI-----KCDVTAQAFLEETAVMTKLHHKNLVRLLG 66
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
+ +V E M G+L ++LR R A + + + + A G+ +L ++
Sbjct: 67 VI-LHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SKKLV 122
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERG 843
H D+ NIL+++ AKVSDFGLAR+ S ++ + + E + + + +
Sbjct: 123 HRDLAARNILVSEDGVAKVSDFGLARV----GSMGVDNSKLPVKWTAPEALKHKKFSSKS 178
Query: 844 DIYSFGVILLELVT-GKQP 861
D++S+GV+L E+ + G+ P
Sbjct: 179 DVWSYGVLLWEVFSYGRAP 197
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 78.9 bits (194), Expect = 6e-16
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 43/235 (18%)
Query: 663 IVFENVIGGGGFRTAFKGT------MPDQKTVAVKKLSQATGQCD-REFAAEMETLDMVK 715
+V +G G F K T TVAVK L + + R+ +E L V
Sbjct: 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN 61
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLR--------------NRAASLDW---- 757
H ++++L G CS LL+ EY GSL +LR NR +S
Sbjct: 62 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDE 121
Query: 758 -----GKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812
G A+ +RG+ +L + ++H D+ N+L+ + + K+SDFGL+R +
Sbjct: 122 RALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVY 178
Query: 813 DCESHVSTDTADTIGYVPSEYGQAGRA-----NERGDIYSFGVILLELVT-GKQP 861
+ +S+V G +P ++ + D++SFGV+L E+VT G P
Sbjct: 179 EEDSYVKRSK----GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 229
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.7 bits (192), Expect = 9e-16
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 667 NVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCD--REFAAEMETLDMVKHQNLVQ 721
++IG G F +KG + +T VA+K++S + + + E++ L +KH N+V+
Sbjct: 6 DLIGRGAFGVVYKGL--NLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVK 63
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGK-----RCKIAYGAARGISFLHH 776
+G + ++ EY NGSL ++ +G Y +G+++LH
Sbjct: 64 YIGSIETSDSLYIILEYAENGSLRQIIKK------FGPFPESLVAVYVYQVLQGLAYLH- 116
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA 836
+ +IH DIK +NIL K++DFG+A ++D S T ++ E +
Sbjct: 117 --EQGVIHRDIKAANILTTKDGVVKLADFGVATKLND-VSKDDASVVGTPYWMAPEVIEM 173
Query: 837 GRANERGDIYSFGVILLELVTGKQP 861
A+ DI+S G ++EL+TG P
Sbjct: 174 SGASTASDIWSLGCTVIELLTGNPP 198
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 78.5 bits (193), Expect = 1e-15
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 663 IVFENVIGGGGFRTAFKGTMP---DQKTVAVKKLSQATGQCD-REFAAEMETL-DMVKHQ 717
I FE+VIG G F + + + A+K L + + D R+FA E+E L + H
Sbjct: 4 IKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHP 63
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR---------------AASLDWGKRCK 762
N++ LLG C + EY G+L D+LR A++L + +
Sbjct: 64 NIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQ 123
Query: 763 IAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT 822
A A G+ +L + IH D+ N+L+ + +K++DFGL+R E +V
Sbjct: 124 FASDVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLSR---GEEVYVKK-- 175
Query: 823 ADTIGYVPSEYGQAGRAN-----ERGDIYSFGVILLELVT 857
T+G +P + N + D++SFGV+L E+V+
Sbjct: 176 --TMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 1e-15
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 33/223 (14%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKT------VAVKKLSQATGQCDR-EFAAEMETLDMVK 715
I +G G F ++G VA+K +++ +R EF E +
Sbjct: 8 ITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFN 67
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR---------AASLDWGKRCKIAYG 766
++V+LLG S G+ L+V E M G L +LR+R K ++A
Sbjct: 68 CHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAE 127
Query: 767 AARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI 826
A G+++L +H D+ N ++ + K+ DFG+ R I + TD
Sbjct: 128 IADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYE------TDYYRKG 178
Query: 827 G-------YVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
G ++ E + G + D++SFGV+L E+ T +QP
Sbjct: 179 GKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQP 221
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 80.6 bits (199), Expect = 1e-15
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 121 ENQ-LSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR 179
+NQ L G IP+ + L L++I+L NS G +P LG I L+ LD S N NG+IP
Sbjct: 426 DNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPES 485
Query: 180 LGDLTQLQDLDLSDNLLSGSLPVSL 204
LG LT L+ L+L+ N LSG +P +L
Sbjct: 486 LGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 2e-15
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 664 VFE--NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLV 720
VF+ +G G + + +K + VA+K + + +E E+ L +V
Sbjct: 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVP--VEEDLQEIIKEISILKQCDSPYIV 61
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
+ G + +V EY GS+ D ++ +L + I Y +G+ +LH
Sbjct: 62 KYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH---SN 118
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IG---YVPSEYGQA 836
IH DIK NILLN+ +AK++DFG++ ++D + +T IG ++ E Q
Sbjct: 119 KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD-----TMAKRNTVIGTPFWMAPEVIQE 173
Query: 837 GRANERGDIYSFGVILLELVTGKQP 861
N + DI+S G+ +E+ GK P
Sbjct: 174 IGYNNKADIWSLGITAIEMAEGKPP 198
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 3e-15
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGY- 725
N IG G F FK K V K + RE ++ ++ + ++ Y
Sbjct: 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYY 65
Query: 726 -CSVGEEKL-LVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
+ + KL +V EY NG L L+ R L + + G++ LH I
Sbjct: 66 ESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKI 122
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI----GYVPSEYGQAGR 838
+H DIK+ N+ L+ Y K+ D G+A+L+SD +T+ A+TI Y+ E +
Sbjct: 123 LHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD-----NTNFANTIVGTPYYLSPELCEDKP 177
Query: 839 ANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLV 875
NE+ D+++ GV+L E TGK P F+ + G L+
Sbjct: 178 YNEKSDVWALGVVLYECCTGKHP----FDANNQGALI 210
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 76.0 bits (188), Expect = 4e-15
Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 36/214 (16%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKK--LSQATGQCDREFA-AEMETLDMVKHQNLVQL 722
IG G F + D K +K+ LS + + +RE A E++ L + H N+++
Sbjct: 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEK-EREDALNEVKILKKLNHPNIIK- 63
Query: 723 LGYCSVGEEK---LLVYEYMVNGSLDDWLRNRAAS---------LDWGKRCKIAYGAARG 770
Y EEK +V EY G L ++ + LDW ++
Sbjct: 64 --YYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDW--FVQLCLA---- 115
Query: 771 ISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG--- 827
+ +LH I+H DIK NI L K+ DFG+++++S T +G
Sbjct: 116 LKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKT----VVGTPY 168
Query: 828 YVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
Y+ E Q N + DI+S G +L EL T K P
Sbjct: 169 YLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHP 202
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 5e-15
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 667 NVIGGGGFRTAFKGTMPDQKT----VAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQ 721
VIG G F + GT+ D AVK L++ T + E F E + H N++
Sbjct: 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS 60
Query: 722 LLGYCSVGE-EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYG--AARGISFLHHGF 778
LLG C E L+V YM +G L +++R+ + + + I +G A+G+ +L
Sbjct: 61 LLGICLPSEGSPLVVLPYMKHGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLA--- 115
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE---SHVSTDTADTIGYVPSEYGQ 835
+H D+ N +L++ F KV+DFGLAR I D E H T + ++ E Q
Sbjct: 116 SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQ 175
Query: 836 AGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
+ + D++SFGV+L EL+T P P+ + D
Sbjct: 176 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD 210
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 75.4 bits (185), Expect = 6e-15
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 23/213 (10%)
Query: 665 FENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
E +G G F + T VAVK + + + F AE + ++H LV+L
Sbjct: 10 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKL-- 66
Query: 725 YCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCK----IAYGA--ARGISFLHHG 777
+ V +E + ++ E+M GSL D+L++ D G + I + A A G++F+
Sbjct: 67 HAVVTKEPIYIITEFMAKGSLLDFLKS-----DEGSKQPLPKLIDFSAQIAEGMAFIE-- 119
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG 837
+ IH D++ +NIL++ K++DFGLAR+I D E I + E G
Sbjct: 120 -QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 178
Query: 838 RANERGDIYSFGVILLELVT-GKQP----TGPE 865
+ D++SFG++L+E+VT G+ P + PE
Sbjct: 179 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 211
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 7e-15
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 28/206 (13%)
Query: 688 VAVKKLSQATGQCD-REFAA-EMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLD 745
VA+KK ++ D ++ A E++ L ++H+N+V L LV+EY V +L
Sbjct: 29 VAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY-VERTLL 87
Query: 746 DWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSD 804
+ L L + + I++ H H IIH DIK NIL+++ K+ D
Sbjct: 88 ELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN----IIHRDIKPENILVSESGVLKLCD 143
Query: 805 FGLARLISDCESHVSTDTADTIGY-------VPSEYGQAGRANERGDIYSFGVILLELVT 857
FG AR + + TD T Y + YG+ D+++ G I+ EL+
Sbjct: 144 FGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKP------VDVWAIGCIMAELLD 197
Query: 858 GKQPTGPEFEDKDGGNLVDWVLLMMK 883
G +P P G + +D + L+ K
Sbjct: 198 G-EPLFP------GDSDIDQLYLIQK 216
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 7e-15
Identities = 59/194 (30%), Positives = 86/194 (44%), Gaps = 39/194 (20%)
Query: 702 REFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRC 761
R+ E+E L V H N+V+ E ++ E+M GSL+ L
Sbjct: 117 RQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFL-----A 171
Query: 762 KIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD----CESH 817
+A GI++LH + +I+H DIK SN+L+N K++DFG++R+++ C S
Sbjct: 172 DVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSS 228
Query: 818 VSTDTADTIGYVPSEYGQAGRANE----------RGDIYSFGVILLELVTGKQPTGPEFE 867
V TI Y+ E R N GDI+S GV +LE G+ P G
Sbjct: 229 VG-----TIAYMSPE-----RINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV--- 275
Query: 868 DKDGGNLVDWVLLM 881
G DW LM
Sbjct: 276 ----GRQGDWASLM 285
|
Length = 353 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 75.0 bits (184), Expect = 1e-14
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 14/203 (6%)
Query: 668 VIGGGGFRTAFKGT-MPDQKT----VAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQ 721
++G G F T KG +P+ + VA+K + +G Q +E M + + H +V+
Sbjct: 14 LLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVR 73
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKP 780
LLG C G LV + GSL D +R SLD + A+G+ +L H
Sbjct: 74 LLGICP-GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR--- 129
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLI-SDCESHVSTDTADTIGYVPSEYGQAGRA 839
++H ++ NILL +++DFG+A L+ D + + ++ I ++ E GR
Sbjct: 130 -MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRY 188
Query: 840 NERGDIYSFGVILLELVT-GKQP 861
+ D++S+GV + E+++ G +P
Sbjct: 189 THQSDVWSYGVTVWEMMSYGAEP 211
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 74.6 bits (183), Expect = 2e-14
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 10/175 (5%)
Query: 688 VAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQLLGYCSVGEEK--LLVYEYMVNGSL 744
VAVK L + GQ + + E+ L + H+N+V+ G CS K L+ EY+ GSL
Sbjct: 36 VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL 95
Query: 745 DDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSD 804
D+L +L + A G+++LH + IH D+ N+LL++ K+ D
Sbjct: 96 RDYLPKHKLNL--AQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGD 150
Query: 805 FGLARLISDCESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT 857
FGLA+ + + + V D + + E + + + D++SFGV L EL+T
Sbjct: 151 FGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLT 205
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 73.9 bits (182), Expect = 2e-14
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 664 VFE--NVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLV 720
+E IG G + +K + VA+K + G E+ L +H N+V
Sbjct: 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIV 63
Query: 721 QLLG-YCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAY---GAARGISFLH 775
G Y + +KL +V EY GSL D + L +IAY +G+++LH
Sbjct: 64 AYFGSY--LRRDKLWIVMEYCGGGSLQDIYQVTRGPL---SELQIAYVCRETLKGLAYLH 118
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQ 835
K IH DIK +NILL + + K++DFG++ ++ + + ++ + Y
Sbjct: 119 ETGK---IHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKS-------FIGTPYWM 168
Query: 836 A---------GRANERGDIYSFGVILLELVTGKQP 861
A G + + DI++ G+ +EL + P
Sbjct: 169 APEVAAVERKGGYDGKCDIWALGITAIELAELQPP 203
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 74.2 bits (182), Expect = 2e-14
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 663 IVFENVIGGGGFRTAFKG--TMPDQKT--VAVKKL-SQATGQCDREFAAEMETLDMVKHQ 717
I E ++G G F +G +P ++ VA+ L + + + R F AE TL H
Sbjct: 7 IKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHS 66
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH- 776
N+V+L G + G ++V EYM NG+LD +LR L G+ + G A G+ +L
Sbjct: 67 NIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM 126
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD-CESHVSTDTADTIG-YVPSEYG 834
G+ +H + +L+N K+S F RL D E+ +T + + + E
Sbjct: 127 GY----VHKGLAAHKVLVNSDLVCKISGFR--RLQEDKSEAIYTTMSGKSPVLWAAPEAI 180
Query: 835 QAGRANERGDIYSFGVILLELVT-GKQP 861
Q + D++SFG+++ E+++ G++P
Sbjct: 181 QYHHFSSASDVWSFGIVMWEVMSYGERP 208
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 74.7 bits (183), Expect = 2e-14
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 12/202 (5%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTV----AVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQ 721
V+G G F T +KG +P+ +TV A+K L++ TG + + EF E + + H +LV+
Sbjct: 14 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 73
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY 781
LLG C + LV + M +G L D++ ++ A+G+ +L +
Sbjct: 74 LLGVC-LSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERR 129
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IGYVPSEYGQAGRAN 840
++H D+ N+L+ K++DFGLARL+ E + D I ++ E +
Sbjct: 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFT 189
Query: 841 ERGDIYSFGVILLELVT-GKQP 861
+ D++S+GV + EL+T G +P
Sbjct: 190 HQSDVWSYGVTIWELMTFGGKP 211
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 74.4 bits (183), Expect = 3e-14
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 663 IVFENVIGGGGF-----RTAFKGTMPDQK-TVAVKKLSQATGQCDREFAAEMETLDMV-- 714
+ F +G G F TA+ + D VAVK L +RE A M L ++
Sbjct: 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSERE--ALMSELKIMSH 94
Query: 715 --KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGAARGI 771
H+N+V LLG C++G L++ EY G L ++L R R + L +Y A+G+
Sbjct: 95 LGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGM 154
Query: 772 SFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD-TIGYVP 830
+FL K IH D+ N+LL K+ DFGLAR I + ++V A + ++
Sbjct: 155 AFL--ASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMA 211
Query: 831 SEYGQAGRANERGDIYSFGVILLELVT 857
E D++S+G++L E+ +
Sbjct: 212 PESIFNCVYTFESDVWSYGILLWEIFS 238
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 74.3 bits (182), Expect = 3e-14
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 30/198 (15%)
Query: 687 TVAVKKLSQATGQCD-REFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYMVNGSL 744
TVAVK L + D + +EME + M+ KH+N++ LLG C+ ++ EY G+L
Sbjct: 49 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 108
Query: 745 DDWLRNRAA---------------SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKT 789
++LR R + + Y ARG+ +L IH D+
Sbjct: 109 REYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAA 165
Query: 790 SNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER-----GD 844
N+L+ + K++DFGLAR +++ + + T T G +P ++ +R D
Sbjct: 166 RNVLVTENNVMKIADFGLARDVNNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSD 221
Query: 845 IYSFGVILLELVT-GKQP 861
++SFGV++ E+ T G P
Sbjct: 222 VWSFGVLMWEIFTLGGSP 239
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 73.7 bits (182), Expect = 4e-14
Identities = 64/208 (30%), Positives = 90/208 (43%), Gaps = 35/208 (16%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVKK--LSQA----TGQCDREFAAEMETLDMVKHQNLVQ 721
+G G + +K + VA+KK L RE + L +KH N+V+
Sbjct: 7 LGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREIS----LLKELKHPNIVK 62
Query: 722 LLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
LL E KL LV+EY + L +L R L I Y RG+++ H
Sbjct: 63 LLDVI-HTERKLYLVFEYC-DMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR-- 118
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD--TIGYVPSE------ 832
I+H D+K NIL+N K++DFGLAR + T T + T+ Y E
Sbjct: 119 -ILHRDLKPQNILINRDGVLKLADFGLARAFG---IPLRTYTHEVVTLWYRAPEILLGSK 174
Query: 833 -YGQAGRANERGDIYSFGVILLELVTGK 859
Y A DI+S G I E++TGK
Sbjct: 175 HYSTA------VDIWSVGCIFAEMITGK 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 73.3 bits (181), Expect = 4e-14
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 30/212 (14%)
Query: 665 FENV--IGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQC--DREFAAEMETLDMVKHQ 717
+E + IG G + +K ++KT VA+KK+ + E++ L ++H
Sbjct: 1 YEKIAQIGEGTYGQVYKAR--NKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHP 58
Query: 718 NLVQLLGYCSVGEEK---LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
N+V+L + K +V+EYM + L L + + G+ +L
Sbjct: 59 NIVRLKEIV-TSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYL 116
Query: 775 HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE-- 832
H I+H DIK SNIL+N+ K++DFGLAR + S T+ T+ Y P E
Sbjct: 117 HSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELL 173
Query: 833 -----YGQAGRANERGDIYSFGVILLELVTGK 859
YG D++S G IL EL GK
Sbjct: 174 LGATRYGPE------VDMWSVGCILAELFLGK 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 73.1 bits (179), Expect = 6e-14
Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 31/203 (15%)
Query: 683 PDQKT-VAVKKL-SQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYM 739
P++ T VAVK L S AT + + +EME + M+ KH+N++ LLG C+ ++ EY
Sbjct: 47 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 106
Query: 740 VNGSLDDWLRNR---------------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIH 784
G+L ++LR R L + AY ARG+ +L IH
Sbjct: 107 SKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIH 163
Query: 785 MDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER-- 842
D+ N+L+ + K++DFGLAR I H+ T G +P ++ +R
Sbjct: 164 RDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEALFDRIY 219
Query: 843 ---GDIYSFGVILLELVT-GKQP 861
D++SFGV+L E+ T G P
Sbjct: 220 THQSDVWSFGVLLWEIFTLGGSP 242
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.2 bits (178), Expect = 6e-14
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 714 VKHQNLVQLLGYCSV-GEEKL-LVYEYMVNGSLDDWLRNRAA-SLDWGKRCKIAYGA--A 768
+ H +V+L + + EEKL LV EY G L L S + + Y A
Sbjct: 50 INHPFIVKL--HYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARF----YAAEIV 103
Query: 769 RGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG 827
+ +LH G II+ D+K NILL+ K++DFGLA+ +S S +T T
Sbjct: 104 LALEYLHSLG----IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTF-CGTPE 158
Query: 828 YVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
Y+ E + D +S GV+L E++TGK P F +D
Sbjct: 159 YLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPP----FYAED 197
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 1e-13
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 33/204 (16%)
Query: 683 PDQK-TVAVKKLS-QATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYM 739
PDQ TVAVK L AT + + +EME + ++ KH+N++ LLG C+ ++ EY
Sbjct: 41 PDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYA 100
Query: 740 VNGSLDDWLRNR---------------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIH 784
G+L ++LR R L + AY ARG+ +L IH
Sbjct: 101 AKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIH 157
Query: 785 MDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA----- 839
D+ N+L+ + K++DFGLAR + D + + T + G +P ++ A A
Sbjct: 158 RDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKT----SNGRLPVKW-MAPEALFDRV 212
Query: 840 -NERGDIYSFGVILLELVT-GKQP 861
+ D++SFG+++ E+ T G P
Sbjct: 213 YTHQSDVWSFGILMWEIFTLGGSP 236
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 72.4 bits (177), Expect = 1e-13
Identities = 63/200 (31%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 669 IGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCD---REFAAEMETLDMVKHQNLVQLLG 724
IG G F + T + VAVKK+S + Q + ++ E++ L +KH N ++ G
Sbjct: 29 IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88
Query: 725 YCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
C + E LV EY + GS D L L + I +GA +G+++LH I
Sbjct: 89 -CYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM---I 143
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD--TADTIGYVPSEYGQAGRANE 841
H DIK NILL + + K++DFG A S S V T A + E G+ +
Sbjct: 144 HRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDE----GQYDG 199
Query: 842 RGDIYSFGVILLELVTGKQP 861
+ D++S G+ +EL K P
Sbjct: 200 KVDVWSLGITCIELAERKPP 219
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 71.5 bits (175), Expect = 1e-13
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCD------REFAAEMETLDMVKHQNLV 720
V+G G + T + G + +AVK++ T + E++ L +KH N+V
Sbjct: 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
Q LG C + E++ GS+ L NR L CK G+++LH+
Sbjct: 66 QYLGTCLDDNTISIFMEFVPGGSISSIL-NRFGPLPEPVFCKYTKQILDGVAYLHNN--- 121
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS-TDTADTIGYVPSEYGQAGRA 839
++H DIK +N++L K+ DFG AR ++ H + ++ ++ P Y A
Sbjct: 122 CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTP--YWMAPEV 179
Query: 840 -NERG-----DIYSFGVILLELVTGKQP 861
NE G DI+S G + E+ TGK P
Sbjct: 180 INESGYGRKSDIWSIGCTVFEMATGKPP 207
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 2e-13
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 450 LLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSI 509
L L+N L G IP +S+L +L ++NL GN + G+IPP G ++ L L +N GSI
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 510 PESLGYLS--------GNKLYGSVPTSFG 530
PESLG L+ GN L G VP + G
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 2e-13
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 12/192 (6%)
Query: 669 IGGGGFRTAFKGTM-PDQKTVAVKKLSQA-TGQCDREFAAEMETLDMVKHQNLVQLLGYC 726
IG G F F G + D VAVK + +F E L H N+V+L+G C
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62
Query: 727 SVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMD 786
+ + +V E + G +LR L + ++ AA G+ +L + IH D
Sbjct: 63 TQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLE---SKHCIHRD 119
Query: 787 IKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT----IGYVPSEYGQAGRANER 842
+ N L+ + K+SDFG++R + E V T + + E GR +
Sbjct: 120 LAARNCLVTEKNVLKISDFGMSR---EEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSE 176
Query: 843 GDIYSFGVILLE 854
D++SFG++L E
Sbjct: 177 SDVWSFGILLWE 188
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 2e-13
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 667 NVIGGGGFRTAFKGTMPD-------QKTVAVKKLSQ-ATGQCDREFAAEMETLDMVKHQN 718
N +G G F ++GT D VAVK L + AT Q +EF E + H N
Sbjct: 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60
Query: 719 LVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRN-RAAS-----LDWGKRCKIAYGAARGIS 772
+V+LLG C + E + ++ E M G L +LR+ R L + I A+G
Sbjct: 61 IVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV 120
Query: 773 FLHHGFKPYIIHMDIKTSNILLN--DYFE---AKVSDFGLARLISDCESH-VSTDTADTI 826
+L + + IH D+ N L++ Y K+ DFGLAR I + + + +
Sbjct: 121 YLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPV 177
Query: 827 GYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
++ E G+ + D++SFGV++ E++T G+QP
Sbjct: 178 RWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 2e-13
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVKK--LSQATGQCDREFAAEMETLDMVKHQNLVQLLGY 725
IG G FK +TVA+KK L + G + E++ L +H +V+LL
Sbjct: 8 IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDV 67
Query: 726 CSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHM 785
G +LV EYM L + LR+ L + +G++++H I+H
Sbjct: 68 FPHGSGFVLVMEYMP-SDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHR 123
Query: 786 DIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE--YGQAGRANERG 843
D+K +N+L++ K++DFGLARL S+ E + + T Y E YG + +
Sbjct: 124 DLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGAR-KYDPGV 182
Query: 844 DIYSFGVILLELVTG 858
D+++ G I EL+ G
Sbjct: 183 DLWAVGCIFAELLNG 197
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 71.3 bits (174), Expect = 3e-13
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 669 IGGGGFRTA-FKGTMPDQKTVAVKKLSQATGQCD---REFAAEMETLDMVKHQNLVQLLG 724
IG G F F + + VA+KK+S + Q + ++ E++ L +KH N ++ G
Sbjct: 33 IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKG 92
Query: 725 YCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
C + E LV EY + GS D L L + I +GA +G+++LH +I
Sbjct: 93 -CYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMI 147
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD--TADTIGYVPSEYGQAGRANE 841
H DIK NILL + + K++DFG A + S S V T A + E G+ +
Sbjct: 148 HRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDE----GQYDG 203
Query: 842 RGDIYSFGVILLELVTGKQP 861
+ D++S G+ +EL K P
Sbjct: 204 KVDVWSLGITCIELAERKPP 223
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 3e-13
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 666 ENVIGGGGFRTAFKGTMPD-QKTVAVKK--LSQATGQCDREFAAEMETLDMVKHQNLVQL 722
IG G F +K + VA+K L +A + + + E++ L + + +
Sbjct: 6 LECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIE-DIQQEIQFLSQCRSPYITKY 64
Query: 723 LGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY 781
G + KL ++ EY GS D L+ LD I G+ +LH K
Sbjct: 65 YG-SFLKGSKLWIIMEYCGGGSCLDLLK--PGKLDETYIAFILREVLLGLEYLHEEGK-- 119
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
IH DIK +NILL++ + K++DFG++ ++ S +T T ++ E + +E
Sbjct: 120 -IHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT-FVGTPFWMAPEVIKQSGYDE 177
Query: 842 RGDIYSFGVILLELVTGKQP 861
+ DI+S G+ +EL G+ P
Sbjct: 178 KADIWSLGITAIELAKGEPP 197
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 3e-13
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK----TVAVKKLSQATGQCDRE-FAAEMETLDMVKHQ 717
I IG G F ++G + VAVK T RE F E + H
Sbjct: 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHP 67
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
++V+L+G + +V E G L +L+ SLD +Y + +++L
Sbjct: 68 HIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE-- 124
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG 837
+H DI N+L++ K+ DFGL+R + D + ++ I ++ E
Sbjct: 125 -SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFR 183
Query: 838 RANERGDIYSFGVILLE-LVTGKQP 861
R D++ FGV + E L+ G +P
Sbjct: 184 RFTSASDVWMFGVCMWEILMLGVKP 208
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 5e-13
Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 707 EMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYG 766
E+ L ++H+NLV L+ + LV+E++ + LDD L LD + K +
Sbjct: 50 EIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDD-LEKYPNGLDESRVRKYLFQ 108
Query: 767 AARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI 826
RGI F H IIH DIK NIL++ K+ DFG AR ++ V TD T
Sbjct: 109 ILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA-APGEVYTDYVATR 164
Query: 827 GYVPSE-------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
Y E YG+A DI++ G ++ E++TG +P P D D
Sbjct: 165 WYRAPELLVGDTKYGRA------VDIWAVGCLVTEMLTG-EPLFPGDSDID 208
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 5e-13
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 18/205 (8%)
Query: 668 VIGGGGFRTAFKGT-MPDQKT----VAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQ 721
V+G G F T +KG +PD + VA+K L + T + ++E E + V + +
Sbjct: 14 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCR 73
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLR---NRAASLDWGKRCKIAYGAARGISFLHHGF 778
LLG C +L V + M G L D++R +R S D C A+G+S+L
Sbjct: 74 LLGICLTSTVQL-VTQLMPYGCLLDYVRENKDRIGSQDLLNWC---VQIAKGMSYLE--- 126
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IGYVPSEYGQAG 837
+ ++H D+ N+L+ K++DFGLARL+ E+ D I ++ E
Sbjct: 127 EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHR 186
Query: 838 RANERGDIYSFGVILLELVT-GKQP 861
R + D++S+GV + EL+T G +P
Sbjct: 187 RFTHQSDVWSYGVTVWELMTFGAKP 211
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 5e-13
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 667 NVIGGGGFRTAFKGTM------PDQKTVAVKKLSQ-ATGQCDREFAAEMETLDMVK--HQ 717
+G G F ++G + VAVK L + + Q + +F ME L M K HQ
Sbjct: 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFL--MEALIMSKFNHQ 69
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLR------NRAASLDWGKRCKIAYGAARGI 771
N+V+L+G + ++ E M G L +LR R +SL A A+G
Sbjct: 70 NIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGC 129
Query: 772 SFLH-HGFKPYIIHMDIKTSNILLNDYFE---AKVSDFGLARLISDCESHVSTDTAD-TI 826
+L + F IH DI N LL AK++DFG+AR I + A I
Sbjct: 130 KYLEENHF----IHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPI 185
Query: 827 GYVPSEYGQAGRANERGDIYSFGVILLEL 855
++P E G + D++SFGV+L E+
Sbjct: 186 KWMPPEAFLDGIFTSKTDVWSFGVLLWEI 214
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 69.7 bits (170), Expect = 7e-13
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 35/216 (16%)
Query: 667 NVIGGGGFRTAFKGTMPD---QKTVAVKKLSQATGQCD-REFAAEMETL-DMVKHQNLVQ 721
+VIG G F K + + A+K++ + + D R+FA E+E L + H N++
Sbjct: 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 60
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNR---------------AASLDWGKRCKIAYG 766
LLG C L EY +G+L D+LR A++L + A
Sbjct: 61 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120
Query: 767 AARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI 826
ARG+ +L + IH D+ NIL+ + + AK++DFGL+R E +V T+
Sbjct: 121 VARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK----TM 170
Query: 827 GYVPSEYGQAGRAN-----ERGDIYSFGVILLELVT 857
G +P + N D++S+GV+L E+V+
Sbjct: 171 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 206
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 8e-13
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVK--KLSQATGQCDREFAAEMETLDMVKHQNLVQLLGY 725
IG G F FKG Q+ VA+K L +A + + + E+ L + + G
Sbjct: 12 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYVTKYYGS 70
Query: 726 CSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHM 785
G + ++ EY+ GS D LR A D + + +G+ +LH K IH
Sbjct: 71 YLKGTKLWIIMEYLGGGSALDLLR--AGPFDEFQIATMLKEILKGLDYLHSEKK---IHR 125
Query: 786 DIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDI 845
DIK +N+LL++ + K++DFG+A ++D + +T P E Q + + DI
Sbjct: 126 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP-EVIQQSAYDSKADI 184
Query: 846 YSFGVILLELVTGKQP 861
+S G+ +EL G+ P
Sbjct: 185 WSLGITAIELAKGEPP 200
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 1e-12
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 26 QERRSLVHFKNSLQNPQVLSGWNKT----TRHCHWFGVKCRHSRVVS------LVIQTQS 75
+E +L K+SL P GWN +H W G C+ L + Q
Sbjct: 372 EEVSALQTLKSSLGLPLRF-GWNGDPCVPQQH-PWSGADCQFDSTKGKWFIDGLGLDNQG 429
Query: 76 LKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLL 135
L+G + + L L+ ++LS N + G + P + ++ L++L + N +GSIP LG L
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL 489
Query: 136 TRLETISLRSNSFTGEMPSELG 157
T L ++L NS +G +P+ LG
Sbjct: 490 TSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 1e-12
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDREFAA--EMETLDMVKHQNLVQLLGY 725
IG G + +K + VA+KK+ A E++ L + H N+++LL
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDV 66
Query: 726 CSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPYIIH 784
+ LV+E+M + L +++R L Y +G++F H HG I+H
Sbjct: 67 FRHKGDLYLVFEFM-DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG----ILH 121
Query: 785 MDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE--YGQAGRANER 842
D+K N+L+N K++DFGLAR T T Y E G +
Sbjct: 122 RDLKPENLLINTEGVLKLADFGLARSF-GSPVRPYTHYVVTRWYRAPELLLG-DKGYSTP 179
Query: 843 GDIYSFGVILLELVTGK 859
DI+S G I EL++ +
Sbjct: 180 VDIWSVGCIFAELLSRR 196
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 1e-12
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 669 IGGGGFRTA-FKGTMPDQKTVAVKKLSQATGQCD---REFAAEMETLDMVKHQNLVQLLG 724
IG G F F + + + VA+KK+S + Q + ++ E+ L ++H N +Q G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 725 YCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
C + E LV EY + GS D L L + + +GA +G+++LH +I
Sbjct: 83 -CYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMI 137
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD--TADTIGYVPSEYGQAGRANE 841
H D+K NILL++ K+ DFG A +++ V T A + E G+ +
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDE----GQYDG 193
Query: 842 RGDIYSFGVILLELVTGKQP 861
+ D++S G+ +EL K P
Sbjct: 194 KVDVWSLGITCIELAERKPP 213
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 2e-12
Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 141 ISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSL 200
+ L + G +P+++ ++ L+S++ SGN + G IP LG +T L+ LDLS N +GS+
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 201 PVSLLKNLQSLSYLDVSNNLLSGNIPPEIG 230
P SL + L SL L+++ N LSG +P +G
Sbjct: 483 PESLGQ-LTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 2e-12
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 668 VIGGGGFRTAFKGT-MPDQKT----VAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQ 721
V+G G F T +KG +P+ + VA+K+L +AT + ++E E + V + ++ +
Sbjct: 14 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 73
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLR---NRAAS---LDWGKRCKIAYGAARGISFLH 775
LLG C +L + + M G L D++R + S L+W A+G+++L
Sbjct: 74 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 126
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IGYVPSEYG 834
+ ++H D+ N+L+ K++DFGLA+L+ E + I ++ E
Sbjct: 127 ---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESI 183
Query: 835 QAGRANERGDIYSFGVILLELVT-GKQP 861
+ D++S+GV + EL+T G +P
Sbjct: 184 LHRIYTHQSDVWSYGVTVWELMTFGSKP 211
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 2e-12
Identities = 63/229 (27%), Positives = 95/229 (41%), Gaps = 44/229 (19%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAA-----EMETLDMVK-HQ 717
F +IG G F T K A+K L + Q +E E E L + H
Sbjct: 5 FGKIIGEGSFSTVVLAKEKETNKEYAIKILDKR--QLIKEKKVKYVKIEKEVLTRLNGHP 62
Query: 718 NLVQLLGYCSV-GEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR---GIS 772
+++L Y + EE L V EY NG L ++R SLD ++C + AA +
Sbjct: 63 GIIKL--YYTFQDEENLYFVLEYAPNGELLQYIRKYG-SLD--EKC-TRFYAAEILLALE 116
Query: 773 FLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPS 831
+LH G IIH D+K NILL+ K++DFG A+++ S S T
Sbjct: 117 YLHSKG----IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQI 172
Query: 832 EYGQA-------------------GRANERGDIYSFGVILLELVTGKQP 861
E + A + D+++ G I+ +++TGK P
Sbjct: 173 EKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP 221
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 2e-12
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 664 VFENVIGGGGFRTAFKGTMPDQKT---VAVKKL---SQATGQCDREFAA--EMETLDMVK 715
+G G + +K D++T VA+KK+ + + F A E++ L +K
Sbjct: 3 EKGKKLGEGTYAVVYKAR--DKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAA------- 768
H N++ LL LV+E+M L+ ++++ I A
Sbjct: 61 HPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDK----------SIVLTPADIKSYML 109
Query: 769 ---RGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT 825
RG+ +LH +I+H D+K +N+L+ K++DFGLAR ++ T
Sbjct: 110 MTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVV-T 165
Query: 826 IGYVPSE--YGQAGRANERG---DIYSFGVILLELVTGK 859
Y E +G A G D++S G I EL+
Sbjct: 166 RWYRAPELLFG----ARHYGVGVDMWSVGCIFAELLLRV 200
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 68.2 bits (167), Expect = 3e-12
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 686 KTVAVKKLSQATGQCDREFA-AEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSL 744
+ VAVKK+ Q RE E+ + +H N+V++ VG+E +V E++ G+L
Sbjct: 45 RQVAVKKMD-LRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103
Query: 745 DDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVS 803
D + ++ + + + +SFLH G +IH DIK+ +ILL K+S
Sbjct: 104 TDIVT--HTRMNEEQIATVCLAVLKALSFLHAQG----VIHRDIKSDSILLTSDGRVKLS 157
Query: 804 DFGLARLISD----CESHVSTD---TADTIGYVPSEYGQAGRANERGDIYSFGVILLELV 856
DFG +S +S V T + I +P YG DI+S G++++E+V
Sbjct: 158 DFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLP--YGT------EVDIWSLGIMVIEMV 209
Query: 857 TGKQP 861
G+ P
Sbjct: 210 DGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 3e-12
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 688 VAVKKL-SQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDD 746
VAVK L + T +F E++ + +K+ N+++LLG C + ++ EYM NG L+
Sbjct: 47 VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQ 106
Query: 747 WLRNR--------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798
+L R A ++ + Y A + S + + +H D+ T N L+ +++
Sbjct: 107 FLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHY 166
Query: 799 EAKVSDFGLAR-LISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT 857
K++DFG++R L S + I ++ E G+ D+++FGV L E+ T
Sbjct: 167 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 3e-12
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 686 KTVAVKKLSQ--ATGQCDREFAAEMETLDMVKHQNLVQLLG-YCSVGEEKLLVYEYMVNG 742
+ VA+KK+ + +T + E++ L ++H+N++ L + S E+ V E +
Sbjct: 36 QNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GT 94
Query: 743 SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKV 802
L L +R + + Y RG+ ++H ++H D+K SNIL+N+ + K+
Sbjct: 95 DLHRLLTSRPLEKQFIQY--FLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKI 149
Query: 803 SDFGLARLISDCESHVSTDTADTIGYVPSEYGQA-------GRANERGDIYSFGVILLEL 855
DFGLAR+ + ++ GYV + Y +A + + DI+S G I E+
Sbjct: 150 CDFGLARIQ---DPQMT-------GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEM 199
Query: 856 VTGKQPTGPEFEDKD 870
+ GK P F KD
Sbjct: 200 LEGK----PLFPGKD 210
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 3e-12
Identities = 53/170 (31%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 707 EMETLDMVKHQNLVQLLGYCSVGEEKLL--VYEYMVNGSLDDWLRNRAASLDWGKRC--- 761
E+E K +V+ G + EY GSLD + G R
Sbjct: 49 ELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKR---GGRIGEK 105
Query: 762 ---KIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA-RLISDCESH 817
KIA +G+S+LH IIH DIK SNILL + K+ DFG++ L+ S
Sbjct: 106 VLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV---NSL 159
Query: 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867
T T T Y+ E Q + D++S G+ LLE+ + P PE E
Sbjct: 160 AGTFTG-TSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGE 208
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 4e-12
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCD---REFAAEMETLDMVKHQNLVQLLG 724
IG G F + + + VA+KK+S + Q + ++ E+ L ++H N ++ G
Sbjct: 23 IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKG 82
Query: 725 YCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
C + E LV EY + GS D L L + I +GA +G+++LH + I
Sbjct: 83 -CYLREHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHER---I 137
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD--TADTIGYVPSEYGQAGRANE 841
H DIK NILL + K++DFG A L+S S V T A + E G+ +
Sbjct: 138 HRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDE----GQYDG 193
Query: 842 RGDIYSFGVILLELVTGKQP 861
+ D++S G+ +EL K P
Sbjct: 194 KVDVWSLGITCIELAERKPP 213
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 7e-12
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 37/218 (16%)
Query: 668 VIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDREFAAEMETL-DMVKHQNLVQLL 723
VIG G + +K +KT VA+K + + E E L H N+
Sbjct: 13 VIGEGTYGKVYKAR--HKKTGQLVAIKIMD-IIEDEEEEIKEEYNILRKYSNHPNIATFY 69
Query: 724 GY-----CSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCK---IAY---GAARGI 771
G +++L LV E GS+ D ++ GKR K IAY RG+
Sbjct: 70 GAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKG---LRKKGKRLKEEWIAYILRETLRGL 126
Query: 772 SFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG---- 827
++LH + +IH DIK NILL E K+ DFG++ + +T IG
Sbjct: 127 AYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNT----FIGTPYW 179
Query: 828 ----YVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
+ + + R D++S G+ +EL GK P
Sbjct: 180 MAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPP 217
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 67.2 bits (165), Expect = 8e-12
Identities = 61/229 (26%), Positives = 89/229 (38%), Gaps = 62/229 (27%)
Query: 665 FENVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDREFAA----EMETLDMVKHQ 717
IG G + D++T VA+KK+S D A E++ L ++H+
Sbjct: 4 LLKPIGSGAYGVVCSAV--DKRTGRKVAIKKISNVFD--DLIDAKRILREIKLLRHLRHE 59
Query: 718 NLVQLLG-------------YCSVGEEKLLVYEYMVNGS-LDDWLRNRAASLDWGKRCKI 763
N++ LL Y +V E M + L +++ L
Sbjct: 60 NIIGLLDILRPPSPEDFNDVY--------IVTELM--ETDLHKVIKSPQ-PLTDDHIQYF 108
Query: 764 AYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA 823
Y RG+ +LH +IH D+K SNIL+N + K+ DFGLAR + E T
Sbjct: 109 LYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLT- 164
Query: 824 DTIGYV-------------PSEYGQAGRANERGDIYSFGVILLELVTGK 859
YV S Y +A DI+S G I EL+T K
Sbjct: 165 ---EYVVTRWYRAPELLLSSSRYTKA------IDIWSVGCIFAELLTRK 204
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 9e-12
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCD------REFAAEMETLDMVKHQNL 719
IG G + T +K + + VA+KK+ + RE A ++ L+ +H N+
Sbjct: 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIAL-LKQLESFEHPNI 63
Query: 720 VQLLGYCSV----GEEKL-LVYEYMVNGSLDDWLRNRAAS-LDWGKRCKIAYGAARGISF 773
V+LL C E KL LV+E+ V+ L +L L + RG+ F
Sbjct: 64 VRLLDVCHGPRTDRELKLTLVFEH-VDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDF 122
Query: 774 LH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812
LH H I+H D+K NIL+ + K++DFGLAR+ S
Sbjct: 123 LHSH----RIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 67.3 bits (164), Expect = 1e-11
Identities = 95/337 (28%), Positives = 148/337 (43%), Gaps = 39/337 (11%)
Query: 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSL 204
S++ +PS L + L L SG + L +L L LDL+ N L ++ S
Sbjct: 55 SSNTLLLLPSSLSRLLSLDLLSPSGISSLDGSEN-LLNLLPLPSLDLNLNRLRSNI--SE 111
Query: 205 LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSML 264
L L +L+ LD+ NN ++ +IPP IG LK L + ++ + + N L
Sbjct: 112 LLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLK-ELDLSDNKIE----SLPSPLRNLPNL 165
Query: 265 KYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISG 324
K + LS N LS +P+ L N +L ++L GN +S + + + L EL L NN
Sbjct: 166 KNLDLSFNDLSD-LPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNS--- 220
Query: 325 SIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE 384
I EL + +L+ NL ++N LE I N LE
Sbjct: 221 -----IIELLSSLSNLK----------------NLSGLELSNNKLEDLPES-IGNLSNLE 258
Query: 385 KLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCI-SLNTLDLGSNNLNG 443
LDLS+N ++ +G+LTN++ L L+ N +P+ + L+L
Sbjct: 259 TLDLSNNQISS--ISSLGSLTNLRELDLSGNSLSNALPLIALLLLLLELLLNLLLTLKAL 316
Query: 444 CVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNL 480
+ + +LLNNN+LS S L+ L +LN L
Sbjct: 317 ELKLNSILLNNNILSNGETSSPEALSILESLNNLWTL 353
|
Length = 394 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 1e-11
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 10/137 (7%)
Query: 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND 796
E+M GSLD + + + KIA G+++L++ I+H DIK SNIL+N
Sbjct: 83 EFMDCGSLDRIYK-KGGPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNS 139
Query: 797 YFEAKVSDFGLA-RLI-SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLE 854
+ K+ DFG++ LI S ++ V T T Y+ E Q G+ + D++S G+ ++E
Sbjct: 140 RGQIKLCDFGVSGELINSIADTFVGTST-----YMSPERIQGGKYTVKSDVWSLGISIIE 194
Query: 855 LVTGKQPTGPEFEDKDG 871
L GK P D DG
Sbjct: 195 LALGKFPFAFSNIDDDG 211
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 66.3 bits (161), Expect = 1e-11
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 26/202 (12%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVK--KLSQATGQCDREFAA--EMETLDMVKHQNLVQLL 723
+G G + T +KG + + K VA+K +L + G F A E L +KH N+V L
Sbjct: 13 LGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGT---PFTAIREASLLKGLKHANIVLLH 69
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
E LV+EY V+ L ++ L + RG+S++H + YI+
Sbjct: 70 DIIHTKETLTLVFEY-VHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIH---QRYIL 125
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP-------SEYGQA 836
H D+K N+L++D E K++DFGLAR S SH ++ T+ Y P +EY
Sbjct: 126 HRDLKPQNLLISDTGELKLADFGLARAKS-VPSHTYSNEVVTLWYRPPDVLLGSTEYSTC 184
Query: 837 GRANERGDIYSFGVILLELVTG 858
D++ G I +E++ G
Sbjct: 185 ------LDMWGVGCIFVEMIQG 200
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 66.3 bits (161), Expect = 1e-11
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 7/194 (3%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCS 727
IG G T F + + VA+K+++ E+ + +K+ N+V L
Sbjct: 27 IGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL 86
Query: 728 VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDI 787
VG+E +V EY+ GSL D + +D + + + + FLH +IH DI
Sbjct: 87 VGDELFVVMEYLAGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDI 141
Query: 788 KTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYS 847
K+ N+LL K++DFG I+ +S ST T ++ E + DI+S
Sbjct: 142 KSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWS 200
Query: 848 FGVILLELVTGKQP 861
G++ +E+V G+ P
Sbjct: 201 LGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 2e-11
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND 796
E+M GSLD L+ +A + KI+ RG+++L K I+H D+K SNIL+N
Sbjct: 79 EHMDGGSLDQVLK-KAGRIPENILGKISIAVLRGLTYLREKHK--IMHRDVKPSNILVNS 135
Query: 797 YFEAKVSDFGLA-RLI-SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLE 854
E K+ DFG++ +LI S S V T + Y+ E Q + DI+S G+ L+E
Sbjct: 136 RGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPERLQGTHYTVQSDIWSLGLSLVE 190
Query: 855 LVTGKQPTGPE 865
+ G+ P P
Sbjct: 191 MAIGRYPIPPP 201
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 65.5 bits (159), Expect = 2e-11
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVK--KLSQATGQCDREFAAEMETLDMVKHQNLVQLLGY 725
IG G F FKG QK VA+K L +A + + + E+ L + + G
Sbjct: 12 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYVTKYYGS 70
Query: 726 CSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHM 785
+ ++ EY+ GS D L LD + I +G+ +LH K IH
Sbjct: 71 YLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKK---IHR 125
Query: 786 DIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDI 845
DIK +N+LL+++ E K++DFG+A ++D + +T P Q+ + + DI
Sbjct: 126 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY-DSKADI 184
Query: 846 YSFGVILLELVTGKQP 861
+S G+ +EL G+ P
Sbjct: 185 WSLGITAIELAKGEPP 200
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 2e-11
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 29/211 (13%)
Query: 665 FE--NVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDREFAA-------EMETLD 712
FE N IG G + ++ D + VA+KK+ + D E E+ L
Sbjct: 9 FEKLNRIGEGTYGIVYRAR--DTTSGEIVALKKV-----RMDNERDGIPISSLREITLLL 61
Query: 713 MVKHQNLVQLLGYCSVG---EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR 769
++H N+V+L VG + LV EY L L N + + R
Sbjct: 62 NLRHPNIVELK-EVVVGKHLDSIFLVMEY-CEQDLASLLDNMPTPFSESQVKCLMLQLLR 119
Query: 770 GISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYV 829
G+ +LH F IIH D+K SN+LL D K++DFGLAR + T T+ Y
Sbjct: 120 GLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM-TPKVVTLWYR 175
Query: 830 PSEYGQAGRANERG-DIYSFGVILLELVTGK 859
E D+++ G IL EL+ K
Sbjct: 176 APELLLGCTTYTTAIDMWAVGCILAELLAHK 206
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 2e-11
Identities = 61/220 (27%), Positives = 91/220 (41%), Gaps = 23/220 (10%)
Query: 669 IGGGGFRTAFKG---TMPDQKTVAVKKL-SQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
IG G F G + V VK+L + AT F E++ + H N++Q LG
Sbjct: 3 IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLR-NRAA-SLDWGKRC--KIAYGAARGISFLHHGFKP 780
C LLV E+ G L ++LR NR + K ++A A G+ +LH +
Sbjct: 63 QCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QA 119
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGY------VPSEYG 834
IH D+ N L K+ D+GLA L E + T + + G
Sbjct: 120 DFIHSDLALRNCQLTADLSVKIGDYGLA-LEQYPEDYYITKDCHAVPLRWLAPELVEIRG 178
Query: 835 Q---AGRANERGDIYSFGVILLELVT-GKQPTGPEFEDKD 870
Q ++ +I+S GV + EL T QP P+ D+
Sbjct: 179 QDLLPKDQTKKSNIWSLGVTMWELFTAADQPY-PDLSDEQ 217
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 2e-11
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 686 KTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY-EYMVNGSL 744
K V S T + E++ L ++H+ +VQ G C +E L ++ EYM GS+
Sbjct: 33 KQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYG-CLRDDETLSIFMEYMPGGSV 91
Query: 745 DDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSD 804
D L+ A + R K G+ +LH I+H DIK +NIL + K+ D
Sbjct: 92 KDQLKAYGALTETVTR-KYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGD 147
Query: 805 FGLA-RLISDCESHVSTDTADTIG---YVPSEYGQAGRANERGDIYSFGVILLELVTGKQ 860
FG + RL + C S T G ++ E + D++S G ++E++T K
Sbjct: 148 FGASKRLQTICSS--GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKP 205
Query: 861 PTGPEFE 867
P EFE
Sbjct: 206 PWA-EFE 211
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 64.9 bits (158), Expect = 2e-11
Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 23/211 (10%)
Query: 668 VIGGGGFRTAFKGTMPDQ--KTVAVKKL---SQATGQCDRE------FAAEMETLDMVKH 716
+IG G F + + G M + +AVK++ S + DR+ A E+ L ++H
Sbjct: 7 LIGSGSFGSVYLG-MNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH 65
Query: 717 QNLVQLLGYCSVGEEKLLVY-EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
+N+VQ LG S+ + L ++ EY+ GS+ L N A + R + +G+++LH
Sbjct: 66 ENIVQYLG-SSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQ-ILKGLNYLH 123
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA-----DTIGYVP 830
+ IIH DIK +NIL+++ K+SDFG+++ + T+ A ++ ++
Sbjct: 124 N---RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMA 180
Query: 831 SEYGQAGRANERGDIYSFGVILLELVTGKQP 861
E + + DI+S G +++E++TGK P
Sbjct: 181 PEVVKQTSYTRKADIWSLGCLVVEMLTGKHP 211
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 64.9 bits (158), Expect = 3e-11
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 715 KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
KH N+V L VG+E +V EY+ GSL D + +D G+ + + + FL
Sbjct: 74 KHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFL 131
Query: 775 HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834
H +IH DIK+ NILL K++DFG I+ +S ST T ++ E
Sbjct: 132 HSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVV 187
Query: 835 QAGRANERGDIYSFGVILLELVTGKQP 861
+ DI+S G++ +E+V G+ P
Sbjct: 188 TRKAYGPKVDIWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 3e-11
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 21/223 (9%)
Query: 668 VIGGGGFRTAF--KGTMPDQKTVAVKKLSQATGQCDREFAA--EMETLDMVKHQNLVQLL 723
V+G G F + DQK V +K++ D AA E + L ++ H N+++
Sbjct: 7 VVGRGAFGIVHLCRR-KADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEY- 64
Query: 724 GYCSVGEEKLL--VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY 781
Y + E+K L V EY G+L ++++ R SL I + + + LHH
Sbjct: 65 -YENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDED--TILHFFVQILLALHHVHTKL 121
Query: 782 IIHMDIKTSNILLNDY-FEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
I+H D+KT NILL+ + K+ DFG+++++S +S T T Y+ E + N
Sbjct: 122 ILHRDLKTQNILLDKHKMVVKIGDFGISKILSS-KSKAYT-VVGTPCYISPELCEGKPYN 179
Query: 841 ERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMK 883
++ DI++ G +L EL + K+ + NL VL +M
Sbjct: 180 QKSDIWALGCVLYELASLKRAF-------EAANLPALVLKIMS 215
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 4e-11
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 665 FENVIGGGGFRTAFKGTMPDQKT---VAVKKLS---QATGQCDREFAAEMETLDMVKHQN 718
+ +G G + D KT VA+KKLS Q+ R + E+ L + H+N
Sbjct: 19 NLSPVGSGAYGQVCSAF--DTKTGRKVAIKKLSRPFQSAIHAKRTYR-ELRLLKHMDHEN 75
Query: 719 LVQLLGYCSVGEEK------LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGIS 772
++ LL + LV M L++ ++ + S D + Y RG+
Sbjct: 76 VIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKCQKLSDD--HIQFLVYQILRGLK 132
Query: 773 FLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE 832
++H IIH D+K SNI +N+ E K+ DFGLAR D + GYV +
Sbjct: 133 YIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHTDD----------EMTGYVATR 179
Query: 833 YGQA-------GRANERGDIYSFGVILLELVTGK 859
+ +A N+ DI+S G I+ EL+TGK
Sbjct: 180 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGK 213
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 4e-11
Identities = 54/206 (26%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 684 DQKTVAVKKL------------SQATGQCDREFAA--EMETLDMVKHQNLVQLLG-YCSV 728
K VA+KK+ Q G C F E++ ++ +KH+N++ L+ Y
Sbjct: 33 TGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVE- 91
Query: 729 GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIK 788
G+ LV + M L + + + +C I G++ LH K Y +H D+
Sbjct: 92 GDFINLVMDIM-ASDLKKVVDRKIRLTESQVKC-ILLQILNGLNVLH---KWYFMHRDLS 146
Query: 789 TSNILLNDYFEAKVSDFGLAR-------------LISDCESHVSTDTADTIGYVPSE--Y 833
+NI +N K++DFGLAR + T T+ Y E
Sbjct: 147 PANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLM 206
Query: 834 GQAGRANERGDIYSFGVILLELVTGK 859
G A + + D++S G I EL+TGK
Sbjct: 207 G-AEKYHFAVDMWSVGCIFAELLTGK 231
|
Length = 335 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 4e-11
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 660 IAIIVFENVIGGGGFRTAFKG----TMPDQKT--VAVKKLS-QATGQCDREFAAEMETLD 712
++ + F +G F +KG T P ++T VA+K L +A G EF E
Sbjct: 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRS 63
Query: 713 MVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWG-----KRCK----- 762
++H N+V LLG + + +++ Y + L ++L R+ D G K K
Sbjct: 64 RLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEP 123
Query: 763 -----IAYGAARGISFL--HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815
I A G+ FL HH ++H D+ T N+L+ D K+SD GL R + +
Sbjct: 124 ADFVHIVTQIAAGMEFLSSHH-----VVHKDLATRNVLVFDKLNVKISDLGLFREVYAAD 178
Query: 816 SH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
+ + ++ I ++ E G+ + DI+S+GV+L E+ + G QP
Sbjct: 179 YYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 226
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 5e-11
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 688 VAVKKLSQATGQCD-REFAAEMETLDMVKHQNLVQLLGYCS--VGEEKLLVYEYMVNGSL 744
VAVK L +G + E+E L + H+N+V+ G C+ G L+ E++ +GSL
Sbjct: 36 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 95
Query: 745 DDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSD 804
++L ++ ++ K A +G+ +L G + Y+ H D+ N+L+ + K+ D
Sbjct: 96 KEYLPRNKNKINLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAARNVLVESEHQVKIGD 152
Query: 805 FGLARLI-SDCESHVSTDTADT--IGYVPSEYGQAGRANERGDIYSFGVILLELVT 857
FGL + I +D E + D D+ Y P Q+ + D++SFGV L EL+T
Sbjct: 153 FGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQS-KFYIASDVWSFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 6e-11
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 706 AEMETLDMVKHQNLVQLLGYCSVGEEKLLVY-EYMVNGSLDDWLRNRAASLDWGKRCKIA 764
+E+ETL + H N+VQ LG EE L ++ EY+ GS+ LR +
Sbjct: 57 SEIETLKDLDHLNIVQYLG-FETTEEYLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFT 114
Query: 765 YGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD 824
G+++LH I+H D+K N+L++ K+SDFG+++ D + +
Sbjct: 115 EQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQ 171
Query: 825 -TIGYVPSEYGQAGRANERG--DIYSFGVILLELVTGKQPTGPE 865
++ ++ E + DI+S G ++LE+ G++P E
Sbjct: 172 GSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE 215
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 64.5 bits (158), Expect = 7e-11
Identities = 64/196 (32%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 685 QKTVAVKKLSQATGQC---DREFAAEMETLDMVKHQNLVQLLG----------YCSVGEE 731
++ VA+KK+ A R F M ++ H N+V+LL Y
Sbjct: 32 KEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY------ 85
Query: 732 KLLVYEYMVNGSLDDWLRN--RAASL-DWGKRCKIAYGAARGISFLHHGFKPYIIHMDIK 788
LV+EYM + L RA L D KR I Y + + ++H G +IH D+K
Sbjct: 86 --LVFEYM-----ETDLHAVIRANILEDVHKRY-IMYQLLKALKYIHSG---NVIHRDLK 134
Query: 789 TSNILLNDYFEAKVSDFGLARLIS----DCESHVSTDTADTIGYVPSEYGQAGRANERG- 843
SNILLN K++DFGLAR +S + E+ V TD T Y E +G
Sbjct: 135 PSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGV 194
Query: 844 DIYSFGVILLELVTGK 859
D++S G IL E++ GK
Sbjct: 195 DMWSVGCILGEMLLGK 210
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 7e-11
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 669 IGGGGFRTAF----KGTMPDQ--KTVAVKKLSQATGQCDR-EFAAEMETLDMVKHQNLVQ 721
+G G F + KG + D+ VA+K +++A +R EF E + ++V+
Sbjct: 14 LGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 73
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLD---------WGKRCKIAYGAARGIS 772
LLG S G+ L++ E M G L +LR+ ++ K ++A A G++
Sbjct: 74 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMA 133
Query: 773 FLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA-DTIGYVPS 831
+L+ +H D+ N ++ + F K+ DFG+ R I + + + + ++
Sbjct: 134 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 190
Query: 832 EYGQAGRANERGDIYSFGVILLELVT-GKQP 861
E + G D++SFGV+L E+ T +QP
Sbjct: 191 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 221
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 8e-11
Identities = 38/105 (36%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 386 LDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCV 445
L L + L IP I L ++Q + L+ N G IP G SL LDL N+ N
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFN--- 479
Query: 446 VVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFG 490
G IP SL +LT+L LNL GN L+G +P G
Sbjct: 480 -------------GSIPESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 9e-11
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 34/211 (16%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTV-AVKKLSQATGQCDREFAA-----EMETLDMVKHQNLV 720
VIG G F D K + A+K +++ +C + + E L + H LV
Sbjct: 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQ--KCVEKGSVRNVLNERRILQELNHPFLV 63
Query: 721 QLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR--------GI 771
L Y EE + LV + ++ G L L ++ K + + +
Sbjct: 64 NLW-YSFQDEENMYLVVDLLLGGDLRYHL---------SQKVKFSEEQVKFWICEIVLAL 113
Query: 772 SFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP 830
+LH G IIH DIK NILL++ ++DF +A ++ ++T T+ T GY+
Sbjct: 114 EYLHSKG----IIHRDIKPDNILLDEQGHVHITDFNIATKVTP--DTLTTSTSGTPGYMA 167
Query: 831 SEYGQAGRANERGDIYSFGVILLELVTGKQP 861
E + D +S GV E + GK+P
Sbjct: 168 PEVLCRQGYSVAVDWWSLGVTAYECLRGKRP 198
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 1e-10
Identities = 41/118 (34%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 516 LSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYL 575
L L G +P L L ++LS N + G IPP LG++ LE L
Sbjct: 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRG-------------NIPPSLGSITSLEVL 471
Query: 576 DFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS--GICQNLSIISLTGNKDLC 631
D S N +G IPE L L L LNL N L G VP + G + + + T N LC
Sbjct: 472 DLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLC 529
|
Length = 623 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCD-REFAAEMETLDMVKH---QNLVQL 722
+IG G + ++G +P + VA+K ++ T D + E+ L ++ N+ +
Sbjct: 8 LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKY 67
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
G G ++ EY GS+ ++ A + I + ++H K +
Sbjct: 68 YGSYLKGPRLWIIMEYAEGGSVRTLMK--AGPIAEKYISVIIREVLVALKYIH---KVGV 122
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA-NE 841
IH DIK +NIL+ + K+ DFG+A L++ S ST T ++ E G+ +
Sbjct: 123 IHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVG-TPYWMAPEVITEGKYYDT 181
Query: 842 RGDIYSFGVILLELVTGKQP 861
+ DI+S G+ + E+ TG P
Sbjct: 182 KADIWSLGITIYEMATGNPP 201
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 63.2 bits (153), Expect = 1e-10
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 7/194 (3%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCS 727
IG G T + + + VA+K+++ E+ + K+ N+V L
Sbjct: 27 IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 86
Query: 728 VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDI 787
VG+E +V EY+ GSL D + +D G+ + + + FLH +IH DI
Sbjct: 87 VGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDI 141
Query: 788 KTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYS 847
K+ NILL K++DFG I+ +S ST T ++ E + DI+S
Sbjct: 142 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWS 200
Query: 848 FGVILLELVTGKQP 861
G++ +E+V G+ P
Sbjct: 201 LGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 1e-10
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 54/226 (23%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKLS-----QATGQCDREFAAEMETLDMVKHQNLVQL 722
+G G F + ++G + D AVK++S Q + ++ E+ L ++H N+VQ
Sbjct: 8 LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67
Query: 723 LGYCSVGEEKLLVY-EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR------------ 769
LG E+ L ++ E + GSL L+ YG+
Sbjct: 68 LG-TEREEDNLYIFLELVPGGSLAKLLKK--------------YGSFPEPVIRLYTRQIL 112
Query: 770 -GISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGY 828
G+ +LH +H DIK +NIL++ K++DFG+A+ V + +
Sbjct: 113 LGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAK-------QVVE-FSFAKSF 161
Query: 829 VPSEYGQA-------GRANERGDIYSFGVILLELVTGKQPTGPEFE 867
S Y A G DI+S G +LE+ TGK P + E
Sbjct: 162 KGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWS-QLE 206
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQLLGYCS 727
+G G F +K + A K+ Q + + E F E++ L KH N+V L
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF 72
Query: 728 VGEEKLLVY-EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMD 786
E KL + E+ G+LD + L + + ++FLH +IH D
Sbjct: 73 Y-ENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRD 128
Query: 787 IKTSNILLNDYFEAKVSDFGL-ARLISDCESHVSTDTADT-IG--------YVPSEYGQA 836
+K NILL + K++DFG+ A+ S + DT IG V E +
Sbjct: 129 LKAGNILLTLDGDVKLADFGVSAKNKSTLQKR------DTFIGTPYWMAPEVVACETFKD 182
Query: 837 GRANERGDIYSFGVILLELVTGKQP 861
+ + DI+S G+ L+EL + P
Sbjct: 183 NPYDYKADIWSLGITLIELAQMEPP 207
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 2e-10
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 37/209 (17%)
Query: 669 IGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCD-----REFAAEMETLDMVKHQNLVQL 722
+G G F + + + + VA+KK+ + + RE + + + +H N+V+L
Sbjct: 7 LGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRK---LNEHPNIVKL 63
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAAS-LDWGKRCKIAYGAARGISFLH-HGFKP 780
+E V+EYM G+L +++R I Y +G++ +H HGF
Sbjct: 64 KEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGF-- 120
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
H D+K N+L++ K++DFGLAR I + TD T Y RA
Sbjct: 121 --FHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY--TDYVSTRWY---------RAP 167
Query: 841 E---RG-------DIYSFGVILLELVTGK 859
E R DI++ G I+ EL T +
Sbjct: 168 EILLRSTSYSSPVDIWALGCIMAELYTLR 196
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 2e-10
Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 34/194 (17%)
Query: 684 DQKT---VAVKKLS---QATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVG---EEKLL 734
D KT VAVKKLS Q+ R + E+ L +KH+N++ LL + EE
Sbjct: 38 DTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFND 96
Query: 735 VY--EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNI 792
VY +++ L++ ++ + + D + + Y RG+ ++H IIH D+K SN+
Sbjct: 97 VYLVTHLMGADLNNIVKCQKLTDDHVQF--LIYQILRGLKYIHSA---DIIHRDLKPSNL 151
Query: 793 LLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA-------NERGDI 845
+N+ E K+ DFGLAR D + GYV + + +A N+ DI
Sbjct: 152 AVNEDCELKILDFGLARHTDD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDI 201
Query: 846 YSFGVILLELVTGK 859
+S G I+ EL+TG+
Sbjct: 202 WSVGCIMAELLTGR 215
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 2e-10
Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 707 EMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYG 766
E+ L +KH NLV L+ + LV+EY + L++ L + KI +
Sbjct: 50 EIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNE-LEKNPRGVPEHLIKKIIWQ 108
Query: 767 AARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI 826
+ ++F H K IH D+K NIL+ + K+ DFG AR+++ TD T
Sbjct: 109 TLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY-TDYVATR 164
Query: 827 GYVPSE-------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
Y E YG D+++ G + EL+TG QP P D D
Sbjct: 165 WYRAPELLVGDTQYGPP------VDVWAIGCVFAELLTG-QPLWPGKSDVD 208
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 2e-10
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 707 EMETLDMVKHQNLVQLLGYC--SVGEEKLLVY-EYMVNGSLDDWLRNRAASLDWGKRCKI 763
E++ L ++H+ +VQ G C E+ L ++ EYM GS+ D L+ A + R K
Sbjct: 54 EIQLLKNLQHERIVQYYG-CLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTR-KY 111
Query: 764 AYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA-RLISDCESHVSTDT 822
G+S+LH I+H DIK +NIL + K+ DFG + RL + C S +
Sbjct: 112 TRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRS 168
Query: 823 ADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQP 861
Y S +G + D++S G ++E++T K P
Sbjct: 169 VTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 688 VAVKKL-SQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDD 746
VAVK L A+ +F E++ L + N+ +LLG C+V ++ EYM NG L+
Sbjct: 49 VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQ 108
Query: 747 WLRNRAA----------SLDWGKRCKIAYGAARGISFL-HHGFKPYIIHMDIKTSNILLN 795
+L+ A SL + +A A G+ +L F +H D+ T N L+
Sbjct: 109 FLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNF----VHRDLATRNCLVG 164
Query: 796 DYFEAKVSDFGLAR-LISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLE 854
+ K++DFG++R L S V I ++ E G+ + D+++FGV L E
Sbjct: 165 KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWE 224
Query: 855 LVT--GKQP 861
++T +QP
Sbjct: 225 ILTLCREQP 233
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 4e-10
Identities = 54/170 (31%), Positives = 78/170 (45%), Gaps = 27/170 (15%)
Query: 707 EMETLDMVKHQNLVQLLGYCSVGEEKL----------LVYEYMVNGSLDDWLRNRAASLD 756
E++ L + H+N+V L + ++ L LV+EYM + L L +
Sbjct: 56 EIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYM-DHDLMGLLESGLVHFS 114
Query: 757 WGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816
G+++ H K +H DIK SNILLN+ + K++DFGLARL + ES
Sbjct: 115 EDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES 171
Query: 817 HVSTDTADTIGYVPSE-------YGQAGRANERGDIYSFGVILLELVTGK 859
T+ T+ Y P E YG A D++S G IL EL T K
Sbjct: 172 RPYTNKVITLWYRPPELLLGEERYGPA------IDVWSCGCILGELFTKK 215
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 4e-10
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 10/196 (5%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKK---LSQATGQCDREFAAEMETLDMVKHQNLVQLLGY 725
IG G F +KG K V K L +A + + + E+ L + + G
Sbjct: 12 IGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYITRYYGS 70
Query: 726 CSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHM 785
G + ++ EY+ GS D L+ L+ I +G+ +LH K IH
Sbjct: 71 YLKGTKLWIIMEYLGGGSALDLLK--PGPLEETYIATILREILKGLDYLHSERK---IHR 125
Query: 786 DIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDI 845
DIK +N+LL++ + K++DFG+A ++D + +T P Q+ + + DI
Sbjct: 126 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY-DFKADI 184
Query: 846 YSFGVILLELVTGKQP 861
+S G+ +EL G+ P
Sbjct: 185 WSLGITAIELAKGEPP 200
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 7e-10
Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 85 FNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144
S+L+ LDLS N + L + NL LK L + N LS +P L L+ L + L
Sbjct: 137 LLKSNLKELDLSDNKI-ESLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLS 194
Query: 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSL 204
N + ++P E+ + L+ LD S N + + S L +L L L+LS+N L
Sbjct: 195 GNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE--DLPES 250
Query: 205 LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL 240
+ NL +L LD+SNN +S +G+L L +L L
Sbjct: 251 IGNLSNLETLDLSNNQIS--SISSLGSLTNLRELDL 284
|
Length = 394 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 7e-10
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 14/191 (7%)
Query: 686 KTVAVKKL-----SQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL--VYEY 738
+ +AVK++ SQ T + E++ L ++H +VQ G EEK L EY
Sbjct: 28 RELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEY 87
Query: 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798
M GS+ D L+ A + R + +G+S+LH I+H DIK +NIL +
Sbjct: 88 MPGGSIKDQLKAYGALTENVTR-RYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAG 143
Query: 799 EAKVSDFGLARLISD-CESHVSTDTADTIGYVPSEYGQAGRANER-GDIYSFGVILLELV 856
K+ DFG ++ I C S + Y S +G R D++S ++E++
Sbjct: 144 NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEML 203
Query: 857 TGKQPTGPEFE 867
T K P E+E
Sbjct: 204 TEKPPWA-EYE 213
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 60.9 bits (147), Expect = 8e-10
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 715 KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
K+ N+V L VG+E +V EY+ GSL D + +D G+ + + + FL
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFL 132
Query: 775 HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834
H +IH DIK+ NILL K++DFG I+ +S S T ++ E
Sbjct: 133 HSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS-TMVGTPYWMAPEVV 188
Query: 835 QAGRANERGDIYSFGVILLELVTGKQP 861
+ DI+S G++ +E++ G+ P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 8e-10
Identities = 58/183 (31%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 688 VAVKKL-SQATGQCDREF---AAEMETLDMVKHQNLVQLLGYCSVGEEKL-LVYEYMVNG 742
VAVK L S +F AA M +LD H+NL++L G V L +V E G
Sbjct: 26 VAVKCLKSDKLSDIMDDFLKEAAIMHSLD---HENLIRLYGV--VLTHPLMMVTELAPLG 80
Query: 743 SLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAK 801
SL D LR A C A A G+ +L IH D+ NILL + K
Sbjct: 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVK 137
Query: 802 VSDFGLARLISDCESHVSTDTADT--IGYVPSEYGQAGRANERGDIYSFGVILLELVT-G 858
+ DFGL R + E H + + E + + D++ FGV L E+ T G
Sbjct: 138 IGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYG 197
Query: 859 KQP 861
++P
Sbjct: 198 EEP 200
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 8e-10
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 762 KIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821
KIA + + +LH +IH D+K SN+L+N + K+ DFG++ + D S T
Sbjct: 107 KIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD--SVAKTI 162
Query: 822 TADTIGYVPSEY----GQAGRANERGDIYSFGVILLELVTGKQP 861
A Y+ E + + D++S G+ ++EL TG+ P
Sbjct: 163 DAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFP 206
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 8e-10
Identities = 62/222 (27%), Positives = 94/222 (42%), Gaps = 36/222 (16%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLL 723
+ IG G + T P VA+KK+S Q C R E++ L KH+N++ +L
Sbjct: 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLR-EIKILRRFKHENIIGIL 69
Query: 724 ------GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
+ S + +V E M L ++ + S D Y RG+ ++H
Sbjct: 70 DIIRPPSFESF-NDVYIVQELM-ETDLYKLIKTQHLSND--HIQYFLYQILRGLKYIHSA 125
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT---------ADTIGY 828
++H D+K SN+LLN + K+ DFGLAR+ H T A I
Sbjct: 126 ---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIML 182
Query: 829 VPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
Y +A DI+S G IL E+++ + P F KD
Sbjct: 183 NSKGYTKA------IDIWSVGCILAEMLSNR----PLFPGKD 214
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 9e-10
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 31/190 (16%)
Query: 685 QKTVAVKKLS---QATGQCDREFAAEMETLDMVKHQNLVQLLGY---CSVGEEKLLVY-- 736
++ VAVKKLS Q+ R + E+ L +KH+N++ LL + E VY
Sbjct: 40 RQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLV 98
Query: 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND 796
++ L++ ++ + S + + + Y RG+ ++H IIH D+K SN+ +N+
Sbjct: 99 TNLMGADLNNIVKCQKLSDEHVQF--LIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNE 153
Query: 797 YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA-------NERGDIYSFG 849
E ++ DFGLAR D + GYV + + +A N+ DI+S G
Sbjct: 154 DCELRILDFGLARQADD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 203
Query: 850 VILLELVTGK 859
I+ EL+ GK
Sbjct: 204 CIMAELLKGK 213
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 9e-10
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 707 EMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYG 766
E++ L +V G E + E+M GSLD L+ A + K++
Sbjct: 53 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-EAKRIPEEILGKVSIA 111
Query: 767 AARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI 826
RG+++L K I+H D+K SNIL+N E K+ DFG++ + D ++ T
Sbjct: 112 VLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTR 166
Query: 827 GYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864
Y+ E Q + + DI+S G+ L+EL G+ P P
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 1e-09
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 686 KTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLD 745
K VAVKK+ Q E+ + H+N+V + VG+E +V E++ G+L
Sbjct: 48 KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT 107
Query: 746 DWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDF 805
D + + ++ + + R +S+LH+ +IH DIK+ +ILL K+SDF
Sbjct: 108 DIVTH--TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDF 162
Query: 806 GLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER------GDIYSFGVILLELVTGK 859
G + VS + V + Y A R DI+S G++++E++ G+
Sbjct: 163 GFC-------AQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 215
Query: 860 QP 861
P
Sbjct: 216 PP 217
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 1e-09
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 707 EMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAY- 765
E+ L +++H N++ + L+ EY G+L D + + L + + + Y
Sbjct: 49 EIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQL-FEEEMVLWYL 107
Query: 766 -GAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD 824
+S++H K I+H DIKT NI L K+ DFG+++++ S T
Sbjct: 108 FQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET-VVG 163
Query: 825 TIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQ 860
T Y+ E Q + N + DI++ G +L EL+T K+
Sbjct: 164 TPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKR 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 1e-09
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 669 IGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDR-EFAAEMETLDMVKHQNLVQLLG 724
+G G F KG +K VA+K L + R E E E + + + +V+++G
Sbjct: 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIG 62
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIH 784
C E +LV E G L+ +L + + ++ + + G+ +L +H
Sbjct: 63 VCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLE---GKNFVH 118
Query: 785 MDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG------YVPSEYGQAGR 838
D+ N+LL + AK+SDFGL++ + +S+ A + G Y P E +
Sbjct: 119 RDLAARNVLLVNQHYAKISDFGLSKALGADDSYY---KARSAGKWPLKWYAP-ECINFRK 174
Query: 839 ANERGDIYSFGVILLELVT-GKQP----TGPE 865
+ R D++S+G+ + E + G++P GPE
Sbjct: 175 FSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE 206
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 1e-09
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 669 IGGGGFRTAFKGTMPD------QKTVAVKKLSQATGQCDR-EFAAEMETLDMVKHQNLVQ 721
+G G F ++G D + VAVK ++++ +R EF E + ++V+
Sbjct: 14 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 73
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRN-RAASLDWGKR--------CKIAYGAARGIS 772
LLG S G+ L+V E M +G L +LR+ R + + R ++A A G++
Sbjct: 74 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 133
Query: 773 FLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA-DTIGYVPS 831
+L+ +H D+ N ++ F K+ DFG+ R I + + + + ++
Sbjct: 134 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 190
Query: 832 EYGQAGRANERGDIYSFGVILLELVT-GKQP 861
E + G D++SFGV+L E+ + +QP
Sbjct: 191 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 221
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 1e-09
Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 19/222 (8%)
Query: 663 IVFENVIGGGGFRTAFKGT-MPDQKTVAVKKLS-QATGQCDREFAAEMETLDMVKHQNLV 720
I ++ ++G G T +K + ++ +AVK + T + ++ +E+E L ++
Sbjct: 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYII 62
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
G V + E+M GSLD + + L +IA +G+++L K
Sbjct: 63 GFYGAFFVENRISICTEFMDGGSLDVYRKIPEHVLG-----RIAVAVVKGLTYLW-SLK- 115
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLI--SDCESHVSTDTADTIGYVPSEYGQAGR 838
I+H D+K SN+L+N + K+ DFG++ + S +++V T+ Y+ E +
Sbjct: 116 -ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTN-----AYMAPERISGEQ 169
Query: 839 ANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLL 880
D++S G+ +EL G+ P P+ + K+ G+L+ LL
Sbjct: 170 YGIHSDVWSLGISFMELALGRFPY-PQIQ-KNQGSLMPLQLL 209
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 1e-09
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 707 EMETLDMVKHQNLVQLLGYCSVGEEKLL--VYEYMVNGSLDDWLRNRAASLDWGKRCKIA 764
E++ L + H+ +VQ G E+ L E+M GS+ D L++ A + R K
Sbjct: 54 EIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTR-KYT 112
Query: 765 YGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA-RLISDCESHVSTDTA 823
G+S+LH I+H DIK +NIL + K+ DFG + RL + C S +
Sbjct: 113 RQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSV 169
Query: 824 DTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPEFE 867
Y S +G + DI+S G ++E++T K P EFE
Sbjct: 170 TGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWA-EFE 213
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 1e-09
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND 796
E+M GSLD L+ +A + K++ +G+++L K I+H D+K SNIL+N
Sbjct: 83 EHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNS 139
Query: 797 YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELV 856
E K+ DFG++ + D ++ T Y+ E Q + + DI+S G+ L+E+
Sbjct: 140 RGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 196
Query: 857 TGKQPTGP 864
G+ P P
Sbjct: 197 IGRYPIPP 204
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 2e-09
Identities = 62/214 (28%), Positives = 91/214 (42%), Gaps = 28/214 (13%)
Query: 669 IGGGGFRTAFKGTMPDQKT---VAVKKL-SQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
IG G F G + T V VK+L A+ Q +F E + ++H NL+Q LG
Sbjct: 3 IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLG 62
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRN-RAASL---DWGKRCKIAYGAARGISFLHHGFKP 780
C+ LLV E+ G L +LR+ R A L D ++A A G+ LH K
Sbjct: 63 QCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KN 119
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
IH D+ N LL K+ D+GL+ + +V+ D +VP + +
Sbjct: 120 NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQL----WVPLRWIAPELVD 175
Query: 841 E------------RGDIYSFGVILLELVT-GKQP 861
E +++S GV + EL G QP
Sbjct: 176 EVHGNLLVVDQTKESNVWSLGVTIWELFELGSQP 209
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 2e-09
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 667 NVIGGGGFRTAFKGTMPD-----QKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLV 720
+++ G F F G + D ++ V VK + + E L + HQN++
Sbjct: 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNIL 71
Query: 721 QLLGYCSVGEEKLLV-YEYMVNGSLDDWLR-------NRAASLDWGKRCKIAYGAARGIS 772
+L C E V Y YM G+L +L+ N +L + +A A G+S
Sbjct: 72 PILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMS 131
Query: 773 FLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD-TIGYVPS 831
+LH K +IH DI N ++++ + K++D L+R + + H D + + ++
Sbjct: 132 YLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMAL 188
Query: 832 EYGQAGRANERGDIYSFGVILLELVT-GKQP 861
E + D++SFGV+L EL+T G+ P
Sbjct: 189 ESLVNKEYSSASDVWSFGVLLWELMTLGQTP 219
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 2e-09
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 707 EMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWL--RNRAASLDWGKRCKIA 764
E+ + +KH+N+V+L + +LV+EYM + L ++ +LD
Sbjct: 48 EISLMKELKHENIVRLHDVIHTENKLMLVFEYM-DKDLKKYMDTHGVRGALDPNTVKSFT 106
Query: 765 YGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD 824
Y +GI+F H ++H D+K N+L+N E K++DFGLAR + S +
Sbjct: 107 YQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVV- 162
Query: 825 TIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGK 859
T+ Y + R + DI+S G I+ E++TG+
Sbjct: 163 TLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGR 198
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 3e-09
Identities = 81/324 (25%), Positives = 119/324 (36%), Gaps = 80/324 (24%)
Query: 308 RCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAAS 366
L L L NR+ +I E + EL L DL NN T + P+ NL E + +
Sbjct: 91 NLLPLPSLDLNLNRLRSNISE-LLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSD 149
Query: 367 NLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426
N +E SL + N L+ LDLS N L+ +PK + NL+N
Sbjct: 150 NKIE-SLPSPLRNLPNLKNLDLSFNDLSD-LPKLLSNLSN-------------------- 187
Query: 427 DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIP 486
LN LDL N ++ +P + L+ L L+L N + +
Sbjct: 188 ----LNNLDLSGNKIS-----------------DLPPEIELLSALEELDLSNNSII-ELL 225
Query: 487 PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELD 546
+ + GL L +N+L +P S GNL+ L LDLS N++
Sbjct: 226 SSLSNLKNLSGLELSNNKLE-----------------DLPESIGNLSNLETLDLSNNQI- 267
Query: 547 GIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRL 606
LG+L L LD S N L +P L LL L + L
Sbjct: 268 --------------SSISSLGSLTNLRELDLSGNSLSNALPLIA--LLLLLLELLLNLLL 311
Query: 607 EGEVPRSGICQNLSIISLTGNKDL 630
+ + L ++ N +
Sbjct: 312 TLKALELKLNSILLNNNILSNGET 335
|
Length = 394 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 3e-09
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDREFAA--EMETLDMVKHQNLVQLLGY 725
+G G + T +KG + + + VA+K +S T + F A E L +KH N+V L
Sbjct: 13 LGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDI 71
Query: 726 CSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHM 785
E V+EYM + L ++ L + RG++++H +I+H
Sbjct: 72 IHTKETLTFVFEYM-HTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHG---QHILHR 127
Query: 786 DIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE--YGQAGRANERG 843
D+K N+L++ E K++DFGLAR S S++ T+ Y P + G ++
Sbjct: 128 DLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVV-TLWYRPPDVLLGATDYSSAL- 185
Query: 844 DIYSFGVILLELVTGKQPTGP 864
DI+ G I +E++ G QP P
Sbjct: 186 DIWGAGCIFIEMLQG-QPAFP 205
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 3e-09
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 686 KTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLD 745
K VAVKK+ Q E+ + +H+N+V++ VG+E +V E++ G+L
Sbjct: 46 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105
Query: 746 DWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDF 805
D + + ++ + + + +S LH +IH DIK+ +ILL K+SDF
Sbjct: 106 DIVTH--TRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDF 160
Query: 806 GLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER------GDIYSFGVILLELVTGK 859
G + VS + V + Y A R DI+S G++++E+V G+
Sbjct: 161 GFC-------AQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213
Query: 860 QP 861
P
Sbjct: 214 PP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 3e-09
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 762 KIAYGAARGISFL--HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA-RLISDCESHV 818
K+ + + +L HG +IH D+K SNILL+ K+ DFG++ RL+ +S
Sbjct: 118 KMTVAIVKALHYLKEKHG----VIHRDVKPSNILLDASGNVKLCDFGISGRLV---DSKA 170
Query: 819 STDTADTIGYVPSEYGQAGRANE----RGDIYSFGVILLELVTGKQP 861
T +A Y+ E N R D++S G+ L+EL TG+ P
Sbjct: 171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFP 217
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 3e-09
Identities = 67/215 (31%), Positives = 89/215 (41%), Gaps = 31/215 (14%)
Query: 669 IGGGGFRTAFKGTMP-DQKTVAVKKLS---QATGQCDREFAAEMETLDMVKHQNLVQLL- 723
IG G F + T P D K VA+KK+ Q C R F E++ L KH N++ L
Sbjct: 8 IGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFR-ELKMLCFFKHDNVLSALD 66
Query: 724 ----GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK 779
+ EE +V E M + + + S D K Y RG+ +LH
Sbjct: 67 ILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQPLSSDHVK--VFLYQILRGLKYLHSA-- 122
Query: 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE------- 832
I+H DIK N+L+N K+ DFGLAR+ ES T T Y E
Sbjct: 123 -GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRH 181
Query: 833 YGQAGRANERGDIYSFGVILLELVTGK---QPTGP 864
Y A DI+S G I EL+ + Q P
Sbjct: 182 YTSA------VDIWSVGCIFAELLGRRILFQAQSP 210
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 3e-09
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 27/209 (12%)
Query: 668 VIGGGGFRTAFKG-TMPDQKTVAVK--KLSQATGQCDREFAA--EMETLDMVKHQNLVQL 722
+G G + T +KG + + VA+K +L G F A E L +KH N+V L
Sbjct: 12 KLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA---PFTAIREASLLKDLKHANIVTL 68
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
+ LV+EY+ L ++ + L + RG+++ H +
Sbjct: 69 HDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQ---RRV 124
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP-------SEYGQ 835
+H D+K N+L+++ E K++DFGLAR S S ++ T+ Y P +EY
Sbjct: 125 LHRDLKPQNLLISERGELKLADFGLARAKS-VPSKTYSNEVVTLWYRPPDVLLGSTEY-- 181
Query: 836 AGRANERGDIYSFGVILLELVTGKQPTGP 864
+ D++ G I E+ TG +P P
Sbjct: 182 ----STSLDMWGVGCIFYEMATG-RPLFP 205
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 3e-09
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 774 LHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY 833
+ H + ++H DIK+ NI L + K+ DFG ARL++ ++ T T YVP E
Sbjct: 113 VQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVG-TPYYVPPEI 171
Query: 834 GQAGRANERGDIYSFGVILLELVTGKQP 861
+ N + DI+S G IL EL T K P
Sbjct: 172 WENMPYNNKSDIWSLGCILYELCTLKHP 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 4e-09
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 369 LEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDC 428
L G + +IS L+ ++LS N + IP +G++T++++L L+ N F+G IP G
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL 489
Query: 429 ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSL-SRLTNLTTLNLFGNLLTGSIP 486
SL L LN N LSG++P +L RL + + N N IP
Sbjct: 490 TSLRI----------------LNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532
|
Length = 623 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 4e-09
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 30/205 (14%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDREFAA------EMETLDMVKHQNLVQ 721
+G G + T FKG + + VA+K++ + + E A E+ L +KH N+V
Sbjct: 13 LGEGTYATVFKGRSKLTENLVALKEI-----RLEHEEGAPCTAIREVSLLKNLKHANIVT 67
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY 781
L LV+EY+ + L +L N + + RG+S+ H
Sbjct: 68 LHDIIHTERCLTLVFEYL-DSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK---RK 123
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP-------SEYG 834
I+H D+K N+L+N+ E K++DFGLAR S S + T+ Y P +EY
Sbjct: 124 ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVV-TLWYRPPDVLLGSTEYS 182
Query: 835 QAGRANERGDIYSFGVILLELVTGK 859
D++ G IL E+ TG+
Sbjct: 183 TP------IDMWGVGCILYEMATGR 201
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 5e-09
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 669 IGGGGFRTAFKG---TMPDQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLL 723
+G G F T KG +KTVAVK L E E + + + +V+++
Sbjct: 3 LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGAARGISFLH-HGFKPY 781
G C E +LV E G L+ +L +N+ + ++ + + G+ +L F
Sbjct: 63 GICE-AESWMLVMELAELGPLNKFLQKNKHVTEK--NITELVHQVSMGMKYLEETNF--- 116
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN- 840
+H D+ N+LL AK+SDFGL++ + E++ A T G P ++ N
Sbjct: 117 -VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK---AKTHGKWPVKWYAPECMNY 172
Query: 841 ----ERGDIYSFGVILLELVT-GKQP 861
+ D++SFGV++ E + G++P
Sbjct: 173 YKFSSKSDVWSFGVLMWEAFSYGQKP 198
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 5e-09
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 686 KTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLD 745
+ VAVK + Q E+ + +HQN+V++ VGEE ++ E++ G+L
Sbjct: 47 RQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT 106
Query: 746 DWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDF 805
D + L+ + + + + +LH +IH DIK+ +ILL K+SDF
Sbjct: 107 DIVSQ--TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDF 161
Query: 806 GLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERG------DIYSFGVILLELVTGK 859
G + +S D V + Y A R DI+S G++++E+V G+
Sbjct: 162 GFC-------AQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGE 214
Query: 860 QP 861
P
Sbjct: 215 PP 216
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 6e-09
Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 27/217 (12%)
Query: 664 VFE--NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH-QNLV 720
+FE V+G G + +KG +A K+ T + E E+ L H +N+
Sbjct: 17 IFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIA 76
Query: 721 QLLGY------CSVGEEKLLVYEYMVNGSLDDWLRNRAASL---DWGKRCKIAY---GAA 768
G ++ LV E+ GS+ D ++N + DW IAY
Sbjct: 77 TYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDW-----IAYICREIL 131
Query: 769 RGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFG----LARLISDCESHVSTDTAD 824
RG++ LH +IH DIK N+LL + E K+ DFG L R + + + T
Sbjct: 132 RGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 188
Query: 825 TIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
+ + + R DI+S G+ +E+ G P
Sbjct: 189 APEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPP 225
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 6e-09
Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 37/195 (18%)
Query: 684 DQKT---VAVKKLS---QATGQCDREFAAEMETLDMVKHQNLVQLLGY---CSVGEEK-- 732
D++T VA+KKLS Q+ R + E+ L ++H+N++ LL G+E
Sbjct: 36 DKRTGEKVAIKKLSRPFQSEIFAKRAYR-ELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94
Query: 733 -LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSN 791
LV YM D + L K + Y G+ ++H IIH D+K N
Sbjct: 95 FYLVMPYMQT----DLQKIMGHPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGN 147
Query: 792 ILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA-------NERGD 844
+ +N+ E K+ DFGLAR D A+ GYV + + +A N+ D
Sbjct: 148 LAVNEDCELKILDFGLAR---------HAD-AEMTGYVVTRWYRAPEVILNWMHYNQTVD 197
Query: 845 IYSFGVILLELVTGK 859
I+S G I+ E++TGK
Sbjct: 198 IWSVGCIMAEMLTGK 212
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 6e-09
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 19/138 (13%)
Query: 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL------HHGFKPYIIHMDI 787
LV +Y G L +++RA + R + A G+ F+ HH ++IH DI
Sbjct: 116 LVLDYANAGDLRQEIKSRAKT----NRTFREHEA--GLLFIQVLLAVHHVHSKHMIHRDI 169
Query: 788 KTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG----YVPSEYGQAGRANERG 843
K++NILL K+ DFG +++ + + VS D T YV E + +++
Sbjct: 170 KSANILLCSNGLVKLGDFGFSKMYA---ATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKA 226
Query: 844 DIYSFGVILLELVTGKQP 861
D++S GV+L EL+T K+P
Sbjct: 227 DMFSLGVLLYELLTLKRP 244
|
Length = 496 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 7e-09
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 15/182 (8%)
Query: 688 VAVKKL-SQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDD 746
VAVK L A +F E++ + +K N+++LL C + ++ EYM NG L+
Sbjct: 49 VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQ 108
Query: 747 WL----------RNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND 796
+L + ++ + +A A G+ +L +H D+ T N L+
Sbjct: 109 FLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNCLVGK 165
Query: 797 YFEAKVSDFGLAR-LISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLEL 855
+ K++DFG++R L S + I ++ E G+ D+++FGV L E+
Sbjct: 166 NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEI 225
Query: 856 VT 857
+T
Sbjct: 226 LT 227
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 57.4 bits (138), Expect = 7e-09
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 27/217 (12%)
Query: 664 VFE--NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH-QNLV 720
+FE ++G G + +KG +A K+ TG + E E+ L H +N+
Sbjct: 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIA 66
Query: 721 QLLGYC------SVGEEKLLVYEYMVNGSLDDWLRNRAASL---DWGKRCKIAY---GAA 768
G + ++ LV E+ GS+ D ++N + +W IAY
Sbjct: 67 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW-----IAYICREIL 121
Query: 769 RGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFG----LARLISDCESHVSTDTAD 824
RG+S LH + +IH DIK N+LL + E K+ DFG L R + + + T
Sbjct: 122 RGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 178
Query: 825 TIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
+ + + + D++S G+ +E+ G P
Sbjct: 179 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 215
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 8e-09
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 347 GVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTN 406
G IP + +L N + N + G++ + + +LE LDLS N IP+ +G LT+
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 407 IQILKLNSNFFDGIIPMEFG 426
++IL LN N G +P G
Sbjct: 492 LRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 1e-08
Identities = 57/206 (27%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLD-MVKHQNLVQLLG--Y 725
IG G + +K T ++A K+ D E AE L + H N+V+ G Y
Sbjct: 30 IGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89
Query: 726 CS---VGEEKLLVYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFK 779
+ VG + LV E GS+ + ++ LD I YGA G+ LH+
Sbjct: 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN-- 147
Query: 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPS----EYGQ 835
IIH D+K +NILL K+ DFG++ ++ +T P E
Sbjct: 148 -RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQY 206
Query: 836 AGRANERGDIYSFGVILLELVTGKQP 861
+ R D++S G+ +EL G P
Sbjct: 207 DYSYDARCDVWSLGITAIELGDGDPP 232
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 1e-08
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 737 EYMVNGSLDDWLRNRAAS--LDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL 794
EYM GSLD A+ + +I Y +G+ FL IIH D+K +N+L+
Sbjct: 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN--IIHRDVKPTNVLV 136
Query: 795 NDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERG------DIYSF 848
N + K+ DFG++ + + ++ Y+ E ++G N+ D++S
Sbjct: 137 NGNGQVKLCDFGVS---GNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSL 193
Query: 849 GVILLELVTGKQPTGPE 865
G+ +LE+ G+ P PE
Sbjct: 194 GLSILEMALGRYPYPPE 210
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 69/226 (30%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 668 VIGGGGFRTAF--KGTMPDQKTVAVKKLSQATGQCDREFAAEMET--LDMVKHQNLVQLL 723
IG G F + K D + +K++ + A++ E L +KH N+V
Sbjct: 7 KIGEGSFGKIYLAKAKS-DSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTF- 64
Query: 724 GYCSVGEEKLL--VYEYMVNGSLDDWL-RNRAAS------LDWGKRCKIAYGAARGISFL 774
+ S E L V EY G L + R R L W +I+ G L
Sbjct: 65 -FASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSW--FVQISLG-------L 114
Query: 775 HHGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY 833
H I+H DIK+ NI L+ + AK+ DFG+AR ++D T T Y+ E
Sbjct: 115 KHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYT-CVGTPYYLSPEI 173
Query: 834 GQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
Q N + DI+S G +L EL T K P FE G NL VL
Sbjct: 174 CQNRPYNNKTDIWSLGCVLYELCTLKHP----FE---GNNLHQLVL 212
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 39/219 (17%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLS--QATGQCDREFAAEMETLDMVKHQNLVQLL 723
IG G F T K D K + K++ T + ++ +E+ L +KH N+V+
Sbjct: 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYY 65
Query: 724 GYCSVGEEKLL--VYEYMVNGSLDDWLRNRAASLDWGKRCK-------------IAYGAA 768
+ L V EY G L A L ++CK I
Sbjct: 66 DRIIDRSNQTLYIVMEYCEGGDL--------AQLI--QKCKKERKYIEEEFIWRILTQLL 115
Query: 769 RGISFLHHGF--KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI----SDCESHVSTDT 822
+ H+ ++H D+K +NI L+ K+ DFGLA+++ S +++V T
Sbjct: 116 LALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPY 175
Query: 823 ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
Y+ E +E+ DI+S G ++ EL P
Sbjct: 176 -----YMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPP 209
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 2e-08
Identities = 61/205 (29%), Positives = 87/205 (42%), Gaps = 19/205 (9%)
Query: 668 VIGGGGF-RTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQN---LVQLL 723
VIG G F QK A+K LS+ + A E D++ N +VQL
Sbjct: 50 VIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL- 108
Query: 724 GYCSVGEEKLL--VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY 781
+C+ ++K L V EYM G L + + N W K + A + L
Sbjct: 109 -FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAK-----FYTAEVVLALDAIHSMG 162
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA-DTIGYVPSEY----GQA 836
+IH D+K N+LL+ + K++DFG + D V DTA T Y+ E G
Sbjct: 163 LIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVRCDTAVGTPDYISPEVLKSQGGD 221
Query: 837 GRANERGDIYSFGVILLELVTGKQP 861
G D +S GV L E++ G P
Sbjct: 222 GYYGRECDWWSVGVFLFEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 688 VAVKKL-SQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDD 746
VAVK L A +F E++ L +K N+++LLG C + ++ EYM NG L+
Sbjct: 49 VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQ 108
Query: 747 WLRNR--------AASLDWGKRC--KIAYGA--------ARGISFLHHGFKPYIIHMDIK 788
+L + C I+Y + A G+ +L +H D+
Sbjct: 109 FLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVHRDLA 165
Query: 789 TSNILLNDYFEAKVSDFGLAR-LISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYS 847
T N L+ + K++DFG++R L + + I ++ E G+ D+++
Sbjct: 166 TRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWA 225
Query: 848 FGVILLEL--VTGKQPTGPEFEDKD 870
FGV L E+ + +QP G E D+
Sbjct: 226 FGVTLWEILMLCKEQPYG-ELTDEQ 249
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 3e-08
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDREFAA------EMETLDMVKHQNLVQ 721
+G G + T +KG + VA+K++ + + E A E+ L +KH N+V
Sbjct: 14 LGEGTYATVYKGRSKLTDNLVALKEI-----RLEHEEGAPCTAIREVSLLKDLKHANIVT 68
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY 781
L + LV+EY+ + L +L + S++ + RG+++ H +
Sbjct: 69 LHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCH---RRK 124
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE--YGQAGRA 839
++H D+K N+L+N+ E K++DFGLAR S S + T+ Y P + G +
Sbjct: 125 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVV-TLWYRPPDILLGSTDYS 183
Query: 840 NERGDIYSFGVILLELVTGK 859
+ D++ G I E+ TG+
Sbjct: 184 TQI-DMWGVGCIFYEMSTGR 202
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 3e-08
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 669 IGGGGFRTAFKGTMPDQ-KTVAVKKLSQATGQ------CDREFAAEMETLDMVKHQNLVQ 721
IG G + T +K P VA+K + T + RE A ++ L+ H N+V+
Sbjct: 8 IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVAL-LKRLEAFDHPNIVR 66
Query: 722 LLGYCSVG----EEKL-LVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGAARGISFLH 775
L+ C+ E K+ LV+E+ V+ L +L + L + RG+ FLH
Sbjct: 67 LMDVCATSRTDRETKVTLVFEH-VDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH 125
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGY-VPSEYG 834
I+H D+K NIL+ + K++DFGLAR+ S C+ + T T+ Y P
Sbjct: 126 AN---CIVHRDLKPENILVTSGGQVKLADFGLARIYS-CQMAL-TPVVVTLWYRAPEVLL 180
Query: 835 QAGRANERGDIYSFGVILLELVTGK 859
Q+ A D++S G I E+ K
Sbjct: 181 QSTYATPV-DMWSVGCIFAEMFRRK 204
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 4e-08
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 668 VIGGGGF------RTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ 721
+IG GGF R A G M K + K++ G+ M +L +
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 60
Query: 722 LLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
+ Y +KL + + M G L L + R + A I L H
Sbjct: 61 CMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMR----FYATEIILGLEHMHNR 116
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA- 839
++++ D+K +NILL+++ ++SD GLA S + H S T GY+ E Q G A
Sbjct: 117 FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH---GYMAPEVLQKGTAY 173
Query: 840 NERGDIYSFGVILLELVTGKQP 861
+ D +S G +L +L+ G P
Sbjct: 174 DSSADWFSLGCMLFKLLRGHSP 195
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 4e-08
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 16/207 (7%)
Query: 669 IGGGGFRTAFK-GTMPDQKTVAVKKLSQA---TGQCDREFAAEMETLDMVKHQNLVQLLG 724
+G GGF +T A+K + + +E E L+ H +V+L
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKL-- 58
Query: 725 YCSVGEEKLL--VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
Y + ++K + + EY + G L LR+R ++ R IA +LH+ I
Sbjct: 59 YRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIA-CVVLAFEYLHN---RGI 114
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGYVPSEYGQAGRANE 841
I+ D+K N+LL+ K+ DFG A+ + + T T T YV E +
Sbjct: 115 IYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK---TWTFCGTPEYVAPEIILNKGYDF 171
Query: 842 RGDIYSFGVILLELVTGKQPTGPEFED 868
D +S G++L EL+TG+ P G + ED
Sbjct: 172 SVDYWSLGILLYELLTGRPPFGEDDED 198
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 5e-08
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 30/215 (13%)
Query: 669 IGGGGFRTAFK-GTMPDQKTVAVKKLS-QATGQCDREFAA-EMETLDMVKHQNLVQLLGY 725
+G G + + +K + D + A+K++ + Q +RE A E+ L V H N++
Sbjct: 8 LGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEA 67
Query: 726 CSVGEEKLLVYEYMVNGSLDDWLRNRAAS-------LDWGKRCKIAYGAARGISFLHHGF 778
G + +V EY G L + R W +I RG+ LH
Sbjct: 68 FLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIW----RIFIQLLRGLQALH--- 120
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG---YVPSEYGQ 835
+ I+H D+K++NILL K+ D G+++++ IG Y+ E +
Sbjct: 121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLK------KNMAKTQIGTPHYMAPEVWK 174
Query: 836 AGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
+ + DI+S G +L E+ T P FE +
Sbjct: 175 GRPYSYKSDIWSLGCLLYEMATFAPP----FEARS 205
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 5e-08
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 30/205 (14%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDREFAA------EMETLDMVKHQNLVQ 721
+G G + T FKG + + VA+K++ + + E A E+ L +KH N+V
Sbjct: 14 LGEGTYATVFKGRSKLTENLVALKEI-----RLEHEEGAPCTAIREVSLLKDLKHANIVT 68
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY 781
L + LV+EY+ + L ++ + + Y RG+++ H +
Sbjct: 69 LHDIVHTDKSLTLVFEYL-DKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCH---RRK 124
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP-------SEYG 834
++H D+K N+L+N+ E K++DFGLAR S S + T+ Y P SEY
Sbjct: 125 VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVV-TLWYRPPDVLLGSSEY- 182
Query: 835 QAGRANERGDIYSFGVILLELVTGK 859
+ + D++ G I E+ +G+
Sbjct: 183 -----STQIDMWGVGCIFFEMASGR 202
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 5e-08
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 17/99 (17%)
Query: 769 RGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGY 828
G++ LH +I+H D+KTSN+LLN+ K+ DFGLAR T T+ Y
Sbjct: 117 SGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPY-TQLVVTLWY 172
Query: 829 VPSE-------YGQAGRANERGDIYSFGVILLELVTGKQ 860
E Y A D++S G I EL+T K
Sbjct: 173 RAPELLLGAKEYSTA------IDMWSVGCIFAELLTKKP 205
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 5e-08
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 33/209 (15%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK---HQNLVQLLG 724
+G G + +K + + AVK + G +F+ + + MVK H N+V G
Sbjct: 17 VGSGTYGDVYKARNLHTGELAAVKIIKLEPGD---DFSLIQQEIFMVKECKHCNIVAYFG 73
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAY---GAARGISFLHHGFKPY 781
E+ + EY GSL D + + L +IAY +G+++LH K
Sbjct: 74 SYLSREKLWICMEYCGGGSLQD-IYHVTGPL---SELQIAYVCRETLQGLAYLHSKGK-- 127
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA----- 836
+H DIK +NILL D + K++DFG+A + ++ A ++ + Y A
Sbjct: 128 -MHRDIKGANILLTDNGDVKLADFGVA-------AKITATIAKRKSFIGTPYWMAPEVAA 179
Query: 837 ----GRANERGDIYSFGVILLELVTGKQP 861
G N+ DI++ G+ +EL + P
Sbjct: 180 VEKNGGYNQLCDIWAVGITAIELAELQPP 208
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 7e-08
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 668 VIGGGGFRTAFKGTMPDQKT---VAVKKLSQ----ATGQCD--REFAAEMETLDMVKHQN 718
+G G F + ++ D KT +AVK+++ ++ Q + E+ + + H +
Sbjct: 7 QLGTGAFSSCYQAR--DVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPH 64
Query: 719 LVQLLG-YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAY--GAARGISFLH 775
++++LG C L V E+M GS+ L A + + I Y RG+S+LH
Sbjct: 65 IIRMLGATCEDSHFNLFV-EWMAGGSVSHLLSKYGA---FKEAVIINYTEQLLRGLSYLH 120
Query: 776 HGFKPYIIHMDIKTSNILLNDYFE-AKVSDFGLA-RLISDCE--SHVSTDTADTIGYVPS 831
IIH D+K +N+L++ + +++DFG A RL + TI ++
Sbjct: 121 EN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAP 177
Query: 832 EYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865
E + + D++S G +++E+ T K P E
Sbjct: 178 EVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAE 211
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 8e-08
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 19/193 (9%)
Query: 679 KGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738
P Q+ V K+ + + F + + H++LV+L G C V +E ++V EY
Sbjct: 23 DIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVC-VRDENIMVEEY 81
Query: 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY- 797
+ G LD +L ++ + +A A + +L ++H ++ NIL+ Y
Sbjct: 82 VKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYG 138
Query: 798 ------FEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER--GDIYSFG 849
K+SD G+ + E V + I ++ E + G+A+ D +SFG
Sbjct: 139 LNEGYVPFIKLSDPGIPITVLSREERV-----ERIPWIAPECIRNGQASLTIAADKWSFG 193
Query: 850 VILLELVT-GKQP 861
LLE+ + G++P
Sbjct: 194 TTLLEICSNGEEP 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 1e-07
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 762 KIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA-RLISDCESHVST 820
KIA + +++L K IIH D+K SNILL+ K+ DFG++ +L+ +S T
Sbjct: 111 KIAVATVKALNYLKEELK--IIHRDVKPSNILLDRNGNIKLCDFGISGQLV---DSIAKT 165
Query: 821 DTADTIGYVPSEYGQAGRANE---RGDIYSFGVILLELVTGKQP 861
A Y+ E + R D++S G+ L E+ TGK P
Sbjct: 166 RDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFP 209
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 2e-07
Identities = 53/225 (23%), Positives = 87/225 (38%), Gaps = 41/225 (18%)
Query: 669 IGGGGFRTAF----KGTMPDQKTVAVKKLS----QATGQCDREFAAEMETLDMVKHQNLV 720
I G + F K T A+K + Q D+ E + L + +V
Sbjct: 1 ISKGAYGRVFLAKKKST---GDIYAIKVIKKADMIRKNQVDQVLT-ERDILSQAQSPYVV 56
Query: 721 QLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAA-SLDWGKRCKIAYGAARGISFLH-HG 777
+L Y G++ L LV EY+ G L L N + D + + +LH +G
Sbjct: 57 KLY-YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVAR--IYIAEIVLALEYLHSNG 113
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI----SDCESHVSTDTADTIG---YVP 830
IIH D+K NIL++ K++DFGL+++ + + +G Y+
Sbjct: 114 ----IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIA 169
Query: 831 SE------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869
E + + D +S G IL E + G P E ++
Sbjct: 170 PEVILGQGHSKT------VDWWSLGCILYEFLVGIPPFHGETPEE 208
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 770 GISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST--DTADTIG 827
G+ FLH K II+ D+K N+LL+ K++DFG+ + + E ST T D
Sbjct: 108 GLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPD--- 161
Query: 828 YVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869
Y+ E + + NE D +SFGV+L E++ G+ P E ED+
Sbjct: 162 YIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE 203
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 24/221 (10%)
Query: 669 IGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDR----EFAAEMETLDMVKHQNLVQ 721
+G G F + +G + + VAVK + A C R +F +E + H N+++
Sbjct: 7 LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI--CTRSEMEDFLSEAVCMKEFDHPNVMR 64
Query: 722 LLGYCSVGEEK------LLVYEYMVNGSLDDWLR-----NRAASLDWGKRCKIAYGAARG 770
L+G C E +++ +M +G L +L + L K A G
Sbjct: 65 LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124
Query: 771 ISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IGYV 829
+ +L IH D+ N +LN+ V+DFGL++ I + + + A + ++
Sbjct: 125 MEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWI 181
Query: 830 PSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
E + D++SFGV + E+ T Q P E+ +
Sbjct: 182 AIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE 222
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 2e-07
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 767 AARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI 826
AA I L H ++++ D+K +NILL+++ ++SD GLA S + H S T
Sbjct: 103 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH--- 159
Query: 827 GYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQP 861
GY+ E Q G A + D +S G +L +L+ G P
Sbjct: 160 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 195
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 2e-07
Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 31/147 (21%)
Query: 734 LVYEYMVNGSL-----------DDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
LV EY+ G +DW + A + G+ LH + I
Sbjct: 74 LVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEV------------VLGVEDLH---QRGI 118
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER 842
IH DIK N+L++ K++DFGL+R + T Y+ E ++
Sbjct: 119 IHRDIKPENLLIDQTGHLKLTDFGLSRNG-----LENKKFVGTPDYLAPETILGVGDDKM 173
Query: 843 GDIYSFGVILLELVTGKQPTGPEFEDK 869
D +S G ++ E + G P E D
Sbjct: 174 SDWWSLGCVIFEFLFGYPPFHAETPDA 200
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 2e-07
Identities = 64/217 (29%), Positives = 89/217 (41%), Gaps = 50/217 (23%)
Query: 668 VIGGG--GFRTAFKGTMPDQKTVAVKKLS---QATGQCDREFAAEMETLDMVKHQNLVQL 722
IG G G A T+ Q VA+KKLS Q R + E+ + +V H+N++ L
Sbjct: 23 PIGSGAQGIVCAAYDTVTGQN-VAIKKLSRPFQNVTHAKRAYR-ELVLMKLVNHKNIIGL 80
Query: 723 LGYCSVGEEKL-------LVYEYM-------VNGSLDDWLRNRAASLDWGKRCKIAYGAA 768
L ++ L LV E M + LD R + L + C
Sbjct: 81 LN-VFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLD---HERMSYLLYQMLC------- 129
Query: 769 RGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGY 828
GI LH IIH D+K SNI++ K+ DFGLAR S + T Y
Sbjct: 130 -GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTP------Y 177
Query: 829 VPSEYGQAGRA------NERGDIYSFGVILLELVTGK 859
V + Y +A E DI+S G I+ E++ G
Sbjct: 178 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGT 214
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 25/208 (12%)
Query: 668 VIGGGGFRTAFKGTMPD----QKTVAVKKLSQAT---GQCDREFA-AEMETLDMVKHQNL 719
V+G GG+ F+ K A+K L +AT Q D AE L+ VKH +
Sbjct: 3 VLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFI 62
Query: 720 VQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISF-LHHGF 778
V L+ G + L+ EY+ G L L ++ A IS L H
Sbjct: 63 VDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFME-----DTACFYLSEISLALEHLH 117
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD-----TIGYVPSEY 833
+ II+ D+K NILL+ K++DFGL C+ + T TI Y+ E
Sbjct: 118 QQGIIYRDLKPENILLDAQGHVKLTDFGL------CKESIHEGTVTHTFCGTIEYMAPEI 171
Query: 834 GQAGRANERGDIYSFGVILLELVTGKQP 861
+ D +S G ++ +++TG P
Sbjct: 172 LMRSGHGKAVDWWSLGALMYDMLTGAPP 199
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 2e-07
Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 16/205 (7%)
Query: 668 VIGGGGFRTAF---KGTMPDQKTVAVKKLSQATGQCDREFAAE-----METLDMVKHQNL 719
V+G G + F K T D + K+ Q + E L+ V+
Sbjct: 7 VLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPF 66
Query: 720 VQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF 778
+ L Y E KL L+ +Y+ G + L R D ++ + + I L H
Sbjct: 67 LVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQR----DNFSEDEVRFYSGEIILALEHLH 122
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY--GQA 836
K I++ DIK NILL+ ++DFGL++ E + TI Y+ E G+
Sbjct: 123 KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKG 182
Query: 837 GRANERGDIYSFGVILLELVTGKQP 861
G D +S G+++ EL+TG P
Sbjct: 183 GHGKAV-DWWSLGILIFELLTGASP 206
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 2e-07
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 23/191 (12%)
Query: 685 QKTVAVKKLSQATGQCDREFA---AEMETLDMVKHQNLVQLLGYCSVGEEKLL-VYEYMV 740
VA+K L + + + A E + H N+V LL L V+EY+
Sbjct: 3 GHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVP 62
Query: 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPYIIHMDIKTSNILL---ND 796
+L + L A L G+ ++ ++ H G I+H D+K NI++
Sbjct: 63 GRTLREVLAADGA-LPAGETGRLMLQVLDALACAHNQG----IVHRDLKPQNIMVSQTGV 117
Query: 797 YFEAKVSDFGLARLISDCESHVS---TDTADTIG---YVPSEY--GQAGRANERGDIYSF 848
AKV DFG+ L+ T T + +G Y E G+ N D+Y++
Sbjct: 118 RPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPN--SDLYAW 175
Query: 849 GVILLELVTGK 859
G+I LE +TG+
Sbjct: 176 GLIFLECLTGQ 186
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 3e-07
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 5/191 (2%)
Query: 677 AFKGTMPDQKTVAVKKLSQATGQCDREFA-AEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735
A +G+ P +K VA K + +A +E+ L H +V+ ++ LL+
Sbjct: 86 ATRGSDPKEKVVA--KFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143
Query: 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795
EY G L+ ++ R + ++ + + L ++H D+K++NI L
Sbjct: 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM 203
Query: 796 DYFEAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLE 854
K+ DFG ++ SD S V++ T Y+ E + R +++ D++S GVIL E
Sbjct: 204 PTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYE 263
Query: 855 LVTGKQP-TGP 864
L+T +P GP
Sbjct: 264 LLTLHRPFKGP 274
|
Length = 478 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 3e-07
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 55/208 (26%)
Query: 688 VAVKKLS---QATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSL 744
VA+KKL Q+ R + E+ L +KH+N++ LL + + SL
Sbjct: 43 VAIKKLYRPFQSELFAKRAYR-ELRLLKHMKHENVIGLLDV------------FTPDLSL 89
Query: 745 DD----WLRNRAASLDWGKRCK-----------IAYGAARGISFLHHGFKPYIIHMDIKT 789
D +L D GK K + Y +G+ ++H IIH D+K
Sbjct: 90 DRFHDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKP 146
Query: 790 SNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG-------RANER 842
N+ +N+ E K+ DFGLAR TD+ T GYV + + +A +
Sbjct: 147 GNLAVNEDCELKILDFGLAR---------QTDSEMT-GYVVTRWYRAPEVILNWMHYTQT 196
Query: 843 GDIYSFGVILLELVTGKQPTGPEFEDKD 870
DI+S G I+ E++TGK P F+ D
Sbjct: 197 VDIWSVGCIMAEMLTGK----PLFKGHD 220
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 4e-07
Identities = 58/177 (32%), Positives = 82/177 (46%), Gaps = 13/177 (7%)
Query: 688 VAVKKLS---QATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE--YMVNG 742
VAVKKLS Q R + E+ L V H+N++ LL + ++ L ++ Y+V
Sbjct: 49 VAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFT-PQKSLEEFQDVYLVME 106
Query: 743 SLDDWL-RNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAK 801
+D L + LD + + Y GI LH IIH D+K SNI++ K
Sbjct: 107 LMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLK 163
Query: 802 VSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTG 858
+ DFGLAR + C + + T T Y E E DI+S G I+ ELV G
Sbjct: 164 ILDFGLAR--TACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 218
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 4e-07
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 669 IGGGGFRTAF-KGTMPDQKTVAVKKL--SQATGQCDREFAAEMETLDMVKHQNLVQLLGY 725
IG G F A + D K +K++ S+ + + E E+ L +KH N+VQ Y
Sbjct: 8 IGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQ---Y 64
Query: 726 CSVGEEK---LLVYEYMVNGSLDDWLRNRAAS-------LDWGKRCKIAYGAARGISFLH 775
EE +V +Y G L + + LDW + +A L
Sbjct: 65 QESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLA---------LK 115
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IG---YVPS 831
H I+H DIK+ NI L K+ DFG+AR++ + + + A T IG Y+
Sbjct: 116 HVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVL-----NSTVELARTCIGTPYYLSP 170
Query: 832 EYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLV 875
E + N + DI++ G +L E+ T K FE + NLV
Sbjct: 171 EICENRPYNNKSDIWALGCVLYEMCTLKHA----FEAGNMKNLV 210
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 4e-07
Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 5/206 (2%)
Query: 660 IAIIVFENVIGGGGFRTAFKGT-MPDQKTVAVKKLS---QATGQCDREFAAEMETLDMVK 715
+A E IG G F ++ T + D+K VA+KK+ + ++ E++ L +
Sbjct: 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN 60
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
H N+++ L E +V E G L ++ + + S +
Sbjct: 61 HPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVE 120
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQ 835
H ++H DIK +N+ + K+ D GL R S ++ + T Y+ E
Sbjct: 121 HMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-KTTAAHSLVGTPYYMSPERIH 179
Query: 836 AGRANERGDIYSFGVILLELVTGKQP 861
N + DI+S G +L E+ + P
Sbjct: 180 ENGYNFKSDIWSLGCLLYEMAALQSP 205
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 4e-07
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 769 RGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGY 828
RG+ ++H ++H D+K SN+LLN + K+ DFGLAR S+ ++
Sbjct: 119 RGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYR 175
Query: 829 VP------SEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
P SEY A D++S G I EL+ K P F KD
Sbjct: 176 APELLLNCSEYTTA------IDVWSVGCIFAELLGRK----PLFPGKD 213
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 5e-07
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 11/183 (6%)
Query: 686 KTVAVKKLSQAT----GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL-LVYEYMV 740
K A+K L +AT + E + L+ ++ + L Y + KL L+ +Y+
Sbjct: 29 KLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYIN 88
Query: 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA 800
G L L R K ++ + + L H K II+ DIK NILL+
Sbjct: 89 GGELFTHLSQRERF----KEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHV 144
Query: 801 KVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA--NERGDIYSFGVILLELVTG 858
++DFGL++ + E + TI Y+ + + G ++ D +S GV++ EL+TG
Sbjct: 145 VLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTG 204
Query: 859 KQP 861
P
Sbjct: 205 ASP 207
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 5e-07
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 767 AARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI 826
AA+ I L H + I++ D+K N+LL+D+ ++SD GLA + + A T
Sbjct: 101 AAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK--IKGRAGTP 158
Query: 827 GYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
GY+ E Q + D ++ G L E++ G+ P
Sbjct: 159 GYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSP 193
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 5e-07
Identities = 48/207 (23%), Positives = 76/207 (36%), Gaps = 43/207 (20%)
Query: 678 FKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737
F T P Q V K+ Q E L V H +++++ G +V
Sbjct: 83 FVATKPGQPDPVVLKIGQKGTTL-----IEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137
Query: 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY 797
+ + L +L R+ L + I G+ +LH IIH D+KT NI +ND
Sbjct: 138 HY-SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDV 193
Query: 798 FEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG-------------RANERGD 844
+ + D G A+ P+ G AG + N + D
Sbjct: 194 DQVCIGDLGAAQF----------PVVA-----PAFLGLAGTVETNAPEVLARDKYNSKAD 238
Query: 845 IYSFGVILLELVT------GKQPTGPE 865
I+S G++L E++ P+ PE
Sbjct: 239 IWSAGIVLFEMLAYPSTIFEDPPSTPE 265
|
Length = 357 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 6e-07
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 267 ISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSI 326
+ L N L G IP ++ L INL GN + G I T+L L L N +GSI
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 327 PEYISEL-PLKVFDLQYNNFTGVIPVSL 353
PE + +L L++ +L N+ +G +P +L
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 9e-07
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 30/217 (13%)
Query: 668 VIGGGGFRTAFKGTMPDQKT----VAVKKLSQATGQCDREF------AAEMETLDMVKHQ 717
++G G F + +G + VAVK + + E AA M+ D H
Sbjct: 6 ILGEGEFGSVMEGQLSQDDGSQLKVAVKTM-KLDIHTYSEIEEFLSEAACMKDFD---HP 61
Query: 718 NLVQLLGYCSVGEEK------LLVYEYMVNGSLDDWL-RNRAAS----LDWGKRCKIAYG 766
N+++L+G C +++ +M +G L +L +R L K
Sbjct: 62 NVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVD 121
Query: 767 AARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT- 825
A G+ +L + IH D+ N +L + V+DFGL++ I + + A
Sbjct: 122 IALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 178
Query: 826 IGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
+ ++ E + D+++FGV + E+ T G+ P
Sbjct: 179 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTP 215
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 9e-07
Identities = 63/208 (30%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Query: 668 VIGGGGFRTAFKGTMPDQKTV-AVKKLSQATGQCDREFAAEMETLDMVKHQN---LVQLL 723
VIG G F K V A+K LS+ + A E D++ H N +VQL
Sbjct: 50 VIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQL- 108
Query: 724 GYCSVGEEKLL--VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGA--ARGISFLHH-GF 778
+ + ++K L V EYM G L + + N W + Y A + +H GF
Sbjct: 109 -HYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWAR----FYTAEVVLALDAIHSMGF 163
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA-DTIGYVPSEY---- 833
IH D+K N+LL+ K++DFG + D V DTA T Y+ E
Sbjct: 164 ----IHRDVKPDNMLLDKSGHLKLADFGTC-MKMDANGMVRCDTAVGTPDYISPEVLKSQ 218
Query: 834 GQAGRANERGDIYSFGVILLELVTGKQP 861
G G D +S GV L E++ G P
Sbjct: 219 GGDGYYGRECDWWSVGVFLYEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 1e-06
Identities = 54/223 (24%), Positives = 86/223 (38%), Gaps = 30/223 (13%)
Query: 669 IGGGGFRTAFKG---TMPDQKTVAVKKL-SQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
IG G F T V VK+L + A+ + EF + + +++H N++Q LG
Sbjct: 3 IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLG 62
Query: 725 YCSVGEEKLLVYEYMVNGSL------DDWLRNRAASLDWGKR-CKIAYGAARGISFLHHG 777
C LLV+EY G L + W R + L + C+IA G H
Sbjct: 63 QCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVT-------HM 115
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG-------YVP 830
K +H D+ N L KV D+G+ E ++ T+ + V
Sbjct: 116 HKHNFLHSDLALRNCFLTSDLTVKVGDYGIG-PSRYKEDYIETEDDKCVPLRWLAPELVG 174
Query: 831 SEYGQ--AGRANERGDIYSFGVILLELV-TGKQPTGPEFEDKD 870
+G + ++++ GV L EL QP D++
Sbjct: 175 EFHGGLITAEQTKPSNVWALGVTLWELFENAAQPY-SHLSDRE 216
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 1e-06
Identities = 44/198 (22%), Positives = 84/198 (42%), Gaps = 8/198 (4%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQLLGYCS 727
+G G F +K + +A K+ + + E + E++ L H N+V+LL
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 72
Query: 728 VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDI 787
++ E+ G++D + L + + +++LH IIH D+
Sbjct: 73 YENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDL 129
Query: 788 KTSNILLNDYFEAKVSDFGLA----RLISDCESHVSTDTADTIGYVPSEYGQAGRANERG 843
K NIL + K++DFG++ R I +S + T V E + + +
Sbjct: 130 KAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 189
Query: 844 DIYSFGVILLELVTGKQP 861
D++S G+ L+E+ + P
Sbjct: 190 DVWSLGITLIEMAQIEPP 207
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 1e-06
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDRE----FAA-EMETLDMVKHQNLVQL 722
IG G + T FK + VA+K++ D E A E+ L +KH+N+V+L
Sbjct: 8 IGEGTYGTVFKAKNRETHEIVALKRVRLDD---DDEGVPSSALREICLLKELKHKNIVRL 64
Query: 723 LGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY 781
++KL LV+EY + L + + +D + +G++F H
Sbjct: 65 YDVLH-SDKKLTLVFEY-CDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH---SHN 119
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLIS---DCESHVSTDTADTIGYVPSE--YGQA 836
++H D+K N+L+N E K++DFGLAR C S T+ Y P + +G A
Sbjct: 120 VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVV----TLWYRPPDVLFG-A 174
Query: 837 GRANERGDIYSFGVILLELVTGKQPTGP 864
+ D++S G I EL +P P
Sbjct: 175 KLYSTSIDMWSAGCIFAELANAGRPLFP 202
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 1e-06
Identities = 59/207 (28%), Positives = 89/207 (42%), Gaps = 34/207 (16%)
Query: 684 DQKTVAVKKLSQATGQCDREFAAEMET--LDMVKHQNLVQLLGYCSVGEEKLL--VYEYM 739
D K +KKL+ AAE E L +KH N+V GE+ LL V +
Sbjct: 24 DGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE-GEDGLLYIVMGFC 82
Query: 740 VNGSLDDWLRNRAASL-------DWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNI 792
G L L+ + L +W + +A + +LH + +I+H D+KT N+
Sbjct: 83 EGGDLYHKLKEQKGKLLPENQVVEWFVQIAMA------LQYLH---EKHILHRDLKTQNV 133
Query: 793 LLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IG---YVPSEYGQAGRANERGDIYSF 848
L KV D G+AR++ E+ D A T IG Y+ E N + D+++
Sbjct: 134 FLTRTNIIKVGDLGIARVL---ENQ--CDMASTLIGTPYYMSPELFSNKPYNYKSDVWAL 188
Query: 849 GVILLELVTGKQPTGPEFEDKDGGNLV 875
G + E+ T K F KD +LV
Sbjct: 189 GCCVYEMATLKHA----FNAKDMNSLV 211
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 1e-06
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 27/206 (13%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK---HQNLVQLLG 724
IG G + +K + + A+K + G+ +FA + + M+K H N+V G
Sbjct: 17 IGSGTYGDVYKARNVNTGELAAIKVIKLEPGE---DFAVVQQEIIMMKDCKHSNIVAYFG 73
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIH 784
++ + E+ GSL D + + L + ++ +G+ +LH K +H
Sbjct: 74 SYLRRDKLWICMEFCGGGSLQD-IYHVTGPLSESQIAYVSRETLQGLYYLHSKGK---MH 129
Query: 785 MDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA-------- 836
DIK +NILL D K++DFG++ + ++ A ++ + Y A
Sbjct: 130 RDIKGANILLTDNGHVKLADFGVS-------AQITATIAKRKSFIGTPYWMAPEVAAVER 182
Query: 837 -GRANERGDIYSFGVILLELVTGKQP 861
G N+ DI++ G+ +EL + P
Sbjct: 183 KGGYNQLCDIWAVGITAIELAELQPP 208
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 1e-06
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 12/200 (6%)
Query: 668 VIGGGGF------RTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ 721
V+G GGF + G M K + K++ + G+ E + L+ V Q +V
Sbjct: 7 VLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGE--SMALNEKQILEKVNSQFVVN 64
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY 781
L + LV M G L + N +R + AA + L +
Sbjct: 65 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEER--ALFYAAEILCGLEDLHREN 122
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
++ D+K NILL+DY ++SD GLA I + ES T+GY+ E R
Sbjct: 123 TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES--IRGRVGTVGYMAPEVLNNQRYTL 180
Query: 842 RGDIYSFGVILLELVTGKQP 861
D + G ++ E++ G+ P
Sbjct: 181 SPDYWGLGCLIYEMIEGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 29/216 (13%)
Query: 668 VIGGGGFRTAF---KGTMPDQKTV-AVKKLSQATGQCDREFAAEME--TLDMVKHQNLVQ 721
V+G G F F K T PD + A+K L +AT + +ME L V H +V+
Sbjct: 3 VLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVK 62
Query: 722 LLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH-GFK 779
L Y E KL L+ +++ G L L + + +A A + LH G
Sbjct: 63 L-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-LALALDHLHSLG-- 118
Query: 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA 839
II+ D+K NILL++ K++DFGL++ D E + T+ Y+ E
Sbjct: 119 --IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEV-----V 170
Query: 840 NERG-----DIYSFGVILLELVTGKQPTGPEFEDKD 870
N RG D +SFGV++ E++TG P F+ KD
Sbjct: 171 NRRGHTQSADWWSFGVLMFEMLTGSLP----FQGKD 202
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 2e-06
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 27/204 (13%)
Query: 669 IGGGGFRTAFKGTMPDQKT----VAVKKLSQATGQ------CDREFAAEMETLDMVKHQN 718
IG G + FK D K VA+K++ TG+ RE A + L+ +H N
Sbjct: 9 IGEGAYGKVFKAR--DLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPN 65
Query: 719 LVQLLGYCSVG----EEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCK-IAYGAARGIS 772
+V+L C+V E KL LV+E+ V+ L +L + K + + RG+
Sbjct: 66 VVRLFDVCTVSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 124
Query: 773 FLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGY-VPS 831
FLH ++H D+K NIL+ + K++DFGLAR+ S T T+ Y P
Sbjct: 125 FLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS--FQMALTSVVVTLWYRAPE 179
Query: 832 EYGQAGRANERGDIYSFGVILLEL 855
Q+ A D++S G I E+
Sbjct: 180 VLLQSSYATPV-DLWSVGCIFAEM 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 2e-06
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 669 IGGGGFRTAFKGTMPDQK--------TVAVKKLSQATGQCDREFAAEMETLDMVKHQNLV 720
+G G F FKG + V +K L ++ F + + H++LV
Sbjct: 3 LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
G C G+E ++V EY+ GSLD +L+ ++ + ++A A + FL
Sbjct: 63 LNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE---DK 119
Query: 781 YIIHMDIKTSNILL---------NDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPS 831
+ H ++ N+LL N F K+SD G++ + E + + I +VP
Sbjct: 120 GLTHGNVCAKNVLLIREEDRKTGNPPF-IKLSDPGISITVLPKEILL-----ERIPWVPP 173
Query: 832 EYGQAGRA-NERGDIYSFGVILLELVTG 858
E + + + D +SFG L E+ +G
Sbjct: 174 ECIENPQNLSLAADKWSFGTTLWEIFSG 201
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 3e-06
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 189 LDLSDNLLSGSLP--VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQ 246
L L + L G +P +S L++LQS+ ++S N + GNIPP +G++ L L L
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSI---NLSGNSIRGNIPPSLGSITSLEVLDL-----S 474
Query: 247 LSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPREL 282
+ F G I +G + L+ ++L+ N LSG +P L
Sbjct: 475 YNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 3e-06
Identities = 51/203 (25%), Positives = 78/203 (38%), Gaps = 10/203 (4%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGY-- 725
IG G + FK + A K+ D E AE L + H N+V+ G
Sbjct: 26 IGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYY 85
Query: 726 ---CSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
G++ LV E GS+ D ++ + + IAY + L H
Sbjct: 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKT 145
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPS----EYGQAGR 838
IH D+K +NILL K+ DFG++ ++ +T P E
Sbjct: 146 IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDST 205
Query: 839 ANERGDIYSFGVILLELVTGKQP 861
+ R D++S G+ +EL G P
Sbjct: 206 YDARCDVWSLGITAIELGDGDPP 228
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 3e-06
Identities = 57/225 (25%), Positives = 86/225 (38%), Gaps = 60/225 (26%)
Query: 665 FENVIGGGGFRTAF----KGTMPDQKTVAVKKLSQA----TGQCDREFAAEMETLDMVKH 716
F +G G F KG+ K A+K LS+A Q + E L ++H
Sbjct: 5 FIKTLGTGSFGRVMLVRHKGS---GKYYALKILSKAKIVKLKQVE-HVLNEKRILQSIRH 60
Query: 717 QNLVQLLG--------YCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGA 767
LV L G Y LV EY+ G L LR + + Y A
Sbjct: 61 PFLVNLYGSFQDDSNLY--------LVMEYVPGGELFSHLRKSGRFPEPVAR----FYAA 108
Query: 768 --ARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT 825
+ +LH I++ D+K N+LL+ K++DFG A+ V T
Sbjct: 109 QVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAK-------RVKGRTYTL 158
Query: 826 IG---YVPSE------YGQAGRANERGDIYSFGVILLELVTGKQP 861
G Y+ E YG+A D ++ G+++ E++ G P
Sbjct: 159 CGTPEYLAPEIILSKGYGKAV------DWWALGILIYEMLAGYPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 3e-06
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 668 VIGGGGF------RTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ 721
V+G GGF + G M K + K++ + G+ E + L+ V + +V
Sbjct: 7 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGES--MALNEKQILEKVNSRFVVS 64
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKP 780
L + LV M G L + + A + G+ A G+ LH +
Sbjct: 65 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH---QE 121
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
I++ D+K NILL+D+ ++SD GLA + E T+GY+ E + R
Sbjct: 122 RIVYRDLKPENILLDDHGHIRISDLGLAVHVP--EGQTIKGRVGTVGYMAPEVVKNERYT 179
Query: 841 ERGDIYSFGVILLELVTGKQP 861
D ++ G +L E++ G+ P
Sbjct: 180 FSPDWWALGCLLYEMIAGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 3e-06
Identities = 54/226 (23%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 666 ENVIGGGGFRTAFKGT-MPDQKTVAVKKL-------SQATGQCDREFAAEMETLDMVKHQ 717
E IG G F +K + D + VA+KK+ ++A C +E ++ L + H
Sbjct: 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKE----IDLLKQLDHP 62
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRC-------KIAYGAARG 770
N+++ L E +V E G L +++ KR K
Sbjct: 63 NVIKYLASFIENNELNIVLELADAGDLSRMIKHFKK----QKRLIPERTIWKYFVQLCSA 118
Query: 771 ISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP 830
+ +H I+H DIK +N+ + K+ D GL R S ++ + T Y+
Sbjct: 119 LEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS-KTTAAHSLVGTPYYMS 174
Query: 831 SEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVD 876
E N + DI+S G +L E+ + P F D NL
Sbjct: 175 PERIHENGYNFKSDIWSLGCLLYEMAALQSP----FY-GDKMNLYS 215
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 4e-06
Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 27/264 (10%)
Query: 386 LDLSSNMLTRQIPKKIGNLTNIQILKLN--SNFFDGIIPMEFGDCISLNTLDLGSNNLNG 443
S+ R++ T Q + LN + + + +S NTL L ++L+
Sbjct: 9 KSALSSNTLREVLSSNTYHTTPQSINLNFPDSNLESVAVNRLALNLSSNTLLLLPSSLSR 68
Query: 444 CVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHN 503
+ + LL + + S +L L L +L+L N L +I + + L L +N
Sbjct: 69 LLSL-DLLSPSGISSLDGSENLLNLLPLPSLDLNLNRLRSNISELLELT-NLTSLDLDNN 126
Query: 504 QLTGSIPESLG---------YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVG---- 550
+T IP +G LS NK+ S+P+ NL L +LDLS N+L +
Sbjct: 127 NIT-DIPPLIGLLKSNLKELDLSDNKI-ESLPSPLRNLPNLKNLDLSFNDLSDLPKLLSN 184
Query: 551 ------LYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADN 604
L + NK ++PPE+ L LE LD S N + + L +L L L L++N
Sbjct: 185 LSNLNNLDLSGNKI-SDLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNN 242
Query: 605 RLEGEVPRSGICQNLSIISLTGNK 628
+LE G NL + L+ N+
Sbjct: 243 KLEDLPESIGNLSNLETLDLSNNQ 266
|
Length = 394 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 4e-06
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA----AEMETLDMVKHQNL 719
V+G G + F G K A+K L +AT + A E + L+ V+
Sbjct: 7 VLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPF 66
Query: 720 VQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF 778
+ L Y + KL L+ +Y+ G L L R + R IA + L H
Sbjct: 67 LVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIA----EIVLALDHLH 122
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY--GQA 836
+ II+ DIK NILL+ ++DFGL++ E + TI Y+ E G +
Sbjct: 123 QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGS 182
Query: 837 GRANERGDIYSFGVILLELVTGKQP 861
G ++ D +S GV+ EL+TG P
Sbjct: 183 GGHDKAVDWWSLGVLTFELLTGASP 207
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 5e-06
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 291 INLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVI 349
+ LD L G I + + +L + L N I G+IP + + L+V DL YN+F G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 350 PVSLWNSENLMEFNAASNLLEGSL 373
P SL +L N N L G +
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRV 506
|
Length = 623 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 5e-06
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDREFAA--EMETLDMVKHQNLVQLLGY 725
+G G F +K + + VA+KK+ + A E++ L +KH N+V L+
Sbjct: 16 LGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDM 75
Query: 726 CSV-----GEEKLLVY---EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
++ VY YM + L L N + L + GI++LH
Sbjct: 76 AVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLH-- 132
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814
+ +I+H DIK +NIL+++ K++DFGLAR
Sbjct: 133 -ENHILHRDIKAANILIDNQGILKIADFGLARPYDGP 168
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 5e-06
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 36/198 (18%)
Query: 686 KTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL---LG------YCSVGEEKLLVY 736
K VAVKK+ Q + E++ + + H N+V++ LG VG L
Sbjct: 31 KRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNS 90
Query: 737 EYMVNGSLDDWLRNRAASLDWGKRCK-----IAYGAARGISFLHHGFKPYIIHMDIKTSN 791
Y+V ++ L N L+ G + Y RG+ ++H ++H D+K +N
Sbjct: 91 VYIVQEYMETDLAN---VLEQGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPAN 144
Query: 792 ILLN-DYFEAKVSDFGLARLISDCESHVS--TDTADTIGY-------VPSEYGQAGRANE 841
+ +N + K+ DFGLAR++ SH ++ T Y P+ Y +A
Sbjct: 145 VFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKA----- 199
Query: 842 RGDIYSFGVILLELVTGK 859
D+++ G I E++TGK
Sbjct: 200 -IDMWAAGCIFAEMLTGK 216
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 5e-06
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 25/117 (21%)
Query: 765 YGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD 824
Y R + ++H + H D+K NIL N + K+ DFGLAR+ DT
Sbjct: 110 YQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV-------AFNDTPT 159
Query: 825 TI---GYVPSEYGQA--------GRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
I YV + + +A + DI+S G I E++TGK P F K+
Sbjct: 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK----PLFPGKN 212
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 6e-06
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 770 GISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR--LISDCESHVSTDTADTIG 827
G+ FLH I++ D+K NILL+ K++DFG+ + ++ D ++ T D
Sbjct: 108 GLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPD--- 161
Query: 828 YVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
Y+ E + N D +SFGV+L E++ G+ P
Sbjct: 162 YIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 6e-06
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 26/207 (12%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQLLGYCS 727
+G G F +K + +A K+ + + + E + E+E L H +V+LLG
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY 79
Query: 728 VGEEKLLVYEYMVNGSLDDWLRNRAASLDWG-KRCKIAYGAARGISFLHHGFKPYIIHMD 786
+ ++ E+ G++D + LD G +I + + L + IIH D
Sbjct: 80 WDGKLWIMIEFCPGGAVDAIM----LELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRD 135
Query: 787 IKTSNILLNDYFEAKVSDFGLA----RLISDCESHVSTD--------TADTIGYVPSEYG 834
+K N+LL + K++DFG++ + + +S + T +T+ P +Y
Sbjct: 136 LKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDY- 194
Query: 835 QAGRANERGDIYSFGVILLELVTGKQP 861
+ DI+S G+ L+E+ + P
Sbjct: 195 -------KADIWSLGITLIEMAQIEPP 214
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 9e-06
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 8/200 (4%)
Query: 668 VIGGGGFRTAFKGTMPDQKT-VAVKKL--SQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
V+G G + K + K VA+KK S+ + E++ L +K +N+V+L
Sbjct: 8 VVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKE 67
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIH 784
+ LV+EY V ++ + L + K Y + I + H K I+H
Sbjct: 68 AFRRRGKLYLVFEY-VEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVH 123
Query: 785 MDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGD 844
DIK N+L++ K+ DFG AR +S+ + T+ T Y E + D
Sbjct: 124 RDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVD 183
Query: 845 IYSFGVILLELVTGKQPTGP 864
++S G IL EL G QP P
Sbjct: 184 MWSVGCILGELSDG-QPLFP 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 1e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Query: 252 GRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTN 311
G I +I L+ I+LS N + G IP L + SL ++L N +G+I + + T+
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 312 LSELVLVNNRISGSIPEYISELPL 335
L L L N +SG +P + L
Sbjct: 492 LRILNLNGNSLSGRVPAALGGRLL 515
|
Length = 623 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 1e-05
Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 17/212 (8%)
Query: 660 IAIIVFENVIGGGGFRTAFKGT-MPDQKTVAVKKL-------SQATGQCDREFAAEMETL 711
+A E IG G F ++ T + D VA+KK+ ++A C +E ++ L
Sbjct: 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKE----IDLL 56
Query: 712 DMVKHQNLVQLLGYCSVGEEKLL--VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR 769
+ H N+++ Y S E+ L V E G L +++ + +
Sbjct: 57 KQLNHPNVIKY--YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQ 114
Query: 770 GISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYV 829
S L H ++H DIK +N+ + K+ D GL R S ++ + T Y+
Sbjct: 115 LCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-KTTAAHSLVGTPYYM 173
Query: 830 PSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
E N + DI+S G +L E+ + P
Sbjct: 174 SPERIHENGYNFKSDIWSLGCLLYEMAALQSP 205
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 1e-05
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 774 LHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY 833
L + I++ D+K NILL+DY ++SD GLA I + E+ T+GY+ E
Sbjct: 115 LEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET--IRGRVGTVGYMAPEV 172
Query: 834 GQAGRANERGDIYSFGVILLELVTGKQP 861
+ R D + G ++ E++ GK P
Sbjct: 173 VKNERYTFSPDWWGLGCLIYEMIEGKSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 1e-05
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 17/113 (15%)
Query: 765 YGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD 824
Y G+ ++H ++H D+K N+L+N E K+ DFGLAR S E+
Sbjct: 112 YQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFS--ENPGENAGFM 166
Query: 825 TIGYVPSEYGQA-------GRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
T YV + + +A + D++S G IL EL+ K P F+ KD
Sbjct: 167 T-EYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRK----PVFKGKD 214
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 1e-05
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 13/181 (7%)
Query: 685 QKTVAVKKLS---QATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE--YM 739
++ VA+KKLS Q R + E+ + V H+N++ LL + ++ L ++ Y+
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFT-PQKSLEEFQDVYI 106
Query: 740 VNGSLDDWL-RNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798
V +D L + LD + + Y GI LH IIH D+K SNI++
Sbjct: 107 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 799 EAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTG 858
K+ DFGLAR S + T T Y E E DI+S G I+ E++ G
Sbjct: 164 TLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
Query: 859 K 859
Sbjct: 222 G 222
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCD-----REFAAEMETLDMVKHQNLVQL 722
IG G F K + K A+K + + + RE A + L H N+++L
Sbjct: 7 IGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQA-LRRLS--PHPNILRL 63
Query: 723 LGYCSVGEEKL-----LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-H 776
V ++ LV+E M + +L + ++ R L + Y + + +H +
Sbjct: 64 ---IEVLFDRKTGRLALVFELM-DMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN 119
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813
G I H DIK NIL+ D K++DFG R I
Sbjct: 120 G----IFHRDIKPENILIKDD-ILKLADFGSCRGIYS 151
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 1e-05
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 765 YGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD 824
+ A+ IS L H + II+ D+K N+LL++ ++SD GLA + D +S + A
Sbjct: 101 FYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK-TKGYAG 159
Query: 825 TIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP---TGPEFEDKD 870
T G++ E Q + D ++ GV L E++ + P G + E+K+
Sbjct: 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 208
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-05
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 19/102 (18%)
Query: 769 RGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE--------SHVST 820
RG+ ++H +IH D+K SN+L+N+ E ++ DFG+AR +S +V+T
Sbjct: 118 RGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVAT 174
Query: 821 D--TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQ 860
A + EY A D++S G I E++ +Q
Sbjct: 175 RWYRAPELLLSLPEYTTA------IDMWSVGCIFAEMLGRRQ 210
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 2e-05
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
I+H D+ +NI+L + + ++DFGLA+ T TI Y E + E
Sbjct: 135 IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQ--PESKLTSVVGTILYSCPEIVKNEPYGE 192
Query: 842 RGDIYSFGVILLELVTGKQP 861
+ D+++FG IL ++ T + P
Sbjct: 193 KADVWAFGCILYQMCTLQPP 212
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 2e-05
Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 686 KTVAVKKLS---QATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE--YMV 740
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ L ++ Y+V
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFT-PQKSLEEFQDVYLV 100
Query: 741 NGSLDDWL-RNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE 799
+D L + LD + + Y GI LH IIH D+K SNI++
Sbjct: 101 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 157
Query: 800 AKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGK 859
K+ DFGLAR S + T T Y E E DI+S G I+ E+V K
Sbjct: 158 LKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 3e-05
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 770 GISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYV 829
G+ FLH II+ D+K N++L+ K++DFG+ + ++ ST T Y+
Sbjct: 108 GLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST-FCGTPDYI 163
Query: 830 PSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869
E Q + D +SFGV+L E++ G+ P + ED+
Sbjct: 164 APEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE 203
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 4e-05
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 18/160 (11%)
Query: 707 EMETLDMVKHQNLVQLLGYCSVGEEKLL--VYEYMVNGSLDDWLRNRAASLDWGKRCKIA 764
E L V H +++L + + +++ L + EY+ G L +LRN + +
Sbjct: 51 EKRVLKEVSHPFIIRL--FWTEHDQRFLYMLMEYVPGGELFSYLRNSGR---FSNSTGLF 105
Query: 765 YGA--ARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT 822
Y + + +LH I++ D+K NILL+ K++DFG A+ + D T T
Sbjct: 106 YASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-----RTWT 157
Query: 823 -ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
T Y+ E Q+ N+ D ++ G+++ E++ G P
Sbjct: 158 LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 4e-05
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 665 FENVIGGGGF-----RTAFKGTMPDQK-TVAVKKLSQATGQCDRE-FAAEMETLDMV-KH 716
F +G G F TA+ D TVAVK L + +RE +E++ L + H
Sbjct: 39 FGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 98
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASL 755
N+V LLG C+VG L++ EY G L ++LR + S
Sbjct: 99 INIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSF 137
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 5e-05
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL 441
L+ LDLS+N LT L N+++L L+ N I P F SL +LDL NNL
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 5e-05
Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 161 QLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNL 220
LKSLD S N L L L+ LDLS N L+ S+ L SL LD+S N
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLT-SISPEAFSGLPSLRSLDLSGNN 59
Query: 221 L 221
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 7e-05
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 20/110 (18%)
Query: 768 ARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH----VSTDT- 822
+ G+ FLH + II+ D+K N++L+ K++DFG+ C+ H V+T T
Sbjct: 111 SVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGM------CKEHMVDGVTTRTF 161
Query: 823 ADTIGYVPSE---YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869
T Y+ E Y G++ D +++GV+L E++ G+ P E ED+
Sbjct: 162 CGTPDYIAPEIIAYQPYGKSV---DWWAYGVLLYEMLAGQPPFDGEDEDE 208
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 7e-05
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 30/211 (14%)
Query: 665 FENV--IGGGGFRTAFKG-TMPDQKTVAVKK--LSQATGQCDREFAAEMETLDMVKHQNL 719
F+ V IG G + +K + VA+KK L T E+ L + H N+
Sbjct: 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 61
Query: 720 VQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAAS-LDWGKRCKIAYGAARGISFLH-HG 777
V+LL + LV+E++ + L ++ S + + +G++F H H
Sbjct: 62 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH- 119
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD--TIGYVPSE--- 832
++H D+K N+L+N K++DFGLAR V T T + T+ Y E
Sbjct: 120 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYTHEVVTLWYRAPEILL 173
Query: 833 ----YGQAGRANERGDIYSFGVILLELVTGK 859
Y A DI+S G I E+VT +
Sbjct: 174 GCKYYSTA------VDIWSLGCIFAEMVTRR 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 8e-05
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 548 IVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLE 607
I GL + + G IP ++ L L+ ++ S N + G+IP L S+ L L+L+ N
Sbjct: 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFN 479
Query: 608 GEVPRS-GICQNLSIISLTGN 627
G +P S G +L I++L GN
Sbjct: 480 GSIPESLGQLTSLRILNLNGN 500
|
Length = 623 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 1e-04
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 24 PKQERRSLVHFKNSLQNP--QVLSGWNKTTR-HCHWFGVKC 61
+R +L+ FK+SL LS WN ++ C W GV C
Sbjct: 1 LNDDRDALLAFKSSLNGDPSGALSSWNPSSSDPCSWTGVTC 41
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 1e-04
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKL---SQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
IG G + +KG + VA+KK+ S+ G E+ L ++H N+V L
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEG-VPSTAIREISLLKELQHPNIVCLQD 66
Query: 725 YCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIA------YGAARGISFLHHG 777
+ E +L L++E++ S+D L+ SL G+ Y +GI F H
Sbjct: 67 VL-MQESRLYLIFEFL---SMD--LKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH-- 118
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGY-VPSEYGQA 836
++H D+K N+L+++ K++DFGLAR V T T+ Y P +
Sbjct: 119 -SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFG-IPVRVYTHEVVTLWYRAPEVLLGS 176
Query: 837 GRANERGDIYSFGVILLELVTGK 859
R + DI+S G I E+ T K
Sbjct: 177 PRYSTPVDIWSIGTIFAEMATKK 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVKK--LSQATGQCDREFAAEMETLDMVKHQNLVQLLGY 725
IG G + +K +T+A+KK L Q E+ L ++H N+V+L
Sbjct: 10 IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL--Q 67
Query: 726 CSVGEEK--LLVYEYMVNGSLD-DWLRNRAASLDWGKRCKIA----YGAARGISFLHHGF 778
V EK LV+EY LD D ++ +S D+ K ++ Y RGI++ H
Sbjct: 68 DVVHSEKRLYLVFEY-----LDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH--- 119
Query: 779 KPYIIHMDIKTSNILLNDYFEA-KVSDFGLARLISDCESHVSTDTAD--TIGYVPSEYGQ 835
++H D+K N+L++ A K++DFGLAR V T T + T+ Y E
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG---IPVRTFTHEVVTLWYRAPEILL 176
Query: 836 AGRANERG-DIYSFGVILLELVTGK 859
R DI+S G I E+V K
Sbjct: 177 GSRHYSTPVDIWSVGCIFAEMVNQK 201
|
Length = 294 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 768 ARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV-STDTADTI 826
ARG+ FL IH D+ NILL++ K+ DFGLAR I +V D +
Sbjct: 183 ARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 239
Query: 827 GYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
++ E + D++SFGV+L E+ + G P
Sbjct: 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASP 275
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 1e-04
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 713 MVKHQNLVQLLGYCSVGEEK--LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARG 770
M + N ++L Y SV K +L+ +Y+ +G L D L+ L + KI
Sbjct: 65 MKDNPNFIKL--YYSVTTLKGHVLIMDYIKDGDLFDLLKKEGK-LSEAEVKKIIRQLVEA 121
Query: 771 ISFLHHGFKPYIIHMDIKTSNILLNDYFEAK----VSDFGLARLISDCESHVSTDTADTI 826
++ LH K IIH DIK N+L Y AK + D+GL + S
Sbjct: 122 LNDLH---KHNIIHNDIKLENVL---YDRAKDRIYLCDYGLCK----IIGTPSCYDGTLD 171
Query: 827 GYVPSEYGQAGRANERG-DIYSFGVILLELVTGKQP 861
+ P + G + D ++ GV+ EL+TGK P
Sbjct: 172 YFSPEKI--KGHNYDVSFDWWAVGVLTYELLTGKHP 205
|
Length = 267 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 16/201 (7%)
Query: 669 IGGGGF------RTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+G GGF + G M K + K+L + +G+ + E E L+ V +V L
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGE--KMALLEKEILEKVNSPFIVNL 58
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAA-SLDWGKRCKIAYGAARGISFLH-HGFKP 780
LV M G L + N L+ + I Y A LH H
Sbjct: 59 AYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMER--VIHYSAQITCGILHLHSMD- 115
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
I++ D+K N+LL+D ++SD GLA + D ++ T A T GY+ E + +
Sbjct: 116 -IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT--ITQRAGTNGYMAPEILKEEPYS 172
Query: 841 ERGDIYSFGVILLELVTGKQP 861
D ++ G + E+V G+ P
Sbjct: 173 YPVDWFAMGCSIYEMVAGRTP 193
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-04
Identities = 31/133 (23%), Positives = 50/133 (37%), Gaps = 32/133 (24%)
Query: 761 CKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS---DCESH 817
I Y ++G+ +H D+K NILL + E + D+G A +
Sbjct: 124 ATIEYVHSKGV-----------LHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLD 172
Query: 818 VSTDTAD--------------TIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863
+ D + T Y+ E A+E DIY+ GVIL +++T P
Sbjct: 173 IDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP-- 230
Query: 864 PEFEDKDGGNLVD 876
+ K G +
Sbjct: 231 --YRRKKGRKISY 241
|
Length = 932 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 22/115 (19%)
Query: 765 YGA--ARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT 822
Y A A G+ FLH II+ D+K N++L+ K++DFG+ C+ ++
Sbjct: 106 YAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGM------CKENIFGGK 156
Query: 823 AD-----TIGYVPSE---YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869
T Y+ E Y G++ D ++FGV+L E++ G+ P E ED+
Sbjct: 157 TTRTFCGTPDYIAPEIIAYQPYGKSV---DWWAFGVLLYEMLAGQPPFDGEDEDE 208
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 2e-04
Identities = 50/176 (28%), Positives = 70/176 (39%), Gaps = 27/176 (15%)
Query: 705 AAEMETLDMVKHQNLVQLLGYCSVGEEKLLV---YEYMVNGSLDDWLRNRAASLDWGKRC 761
A E L + H +++QL G + + L+ Y+ + L + A D
Sbjct: 131 ATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKTDLYCYLAA--KRNIAICDI---L 185
Query: 762 KIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821
I R I +LH IIH DIK NI +N + + DFG A D ++
Sbjct: 186 AIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYG 242
Query: 822 TADTIGYVPSE------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDG 871
A TI E YG A DI+S G++L E+ T FE KDG
Sbjct: 243 WAGTIATNAPELLARDPYGPA------VDIWSAGIVLFEMATCHDSL---FE-KDG 288
|
Length = 391 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 2e-04
Identities = 47/205 (22%), Positives = 79/205 (38%), Gaps = 8/205 (3%)
Query: 668 VIGGGGF-RTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEM---ETLDMVKHQNLVQLL 723
V+G G F + + AVK L + D + M L + ++ + L
Sbjct: 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 61
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
C ++L VNG + ++ D + A + FLH II
Sbjct: 62 YCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLH---DKGII 118
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERG 843
+ D+K N+LL+ K++DFG+ + ++ T Y+ E Q
Sbjct: 119 YRDLKLDNVLLDHEGHCKLADFGMCKE-GIFNGKTTSTFCGTPDYIAPEILQEMLYGPSV 177
Query: 844 DIYSFGVILLELVTGKQPTGPEFED 868
D ++ GV+L E++ G P E ED
Sbjct: 178 DWWAMGVLLYEMLCGHAPFEAENED 202
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 32/169 (18%)
Query: 665 FENVIGGGGFRTAFKG---TMPDQKTVAVKKLSQATGQCD-------REFAAEMETLDMV 714
E IG G + +K D K A+KK Q RE A E +
Sbjct: 4 IEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRE----L 59
Query: 715 KHQNLVQLLGYC-SVGEEKL-LVYEYMVNGSLDDW------LRNRAASLDWGKRCKIAYG 766
KH+N+V L+ ++ + L+++Y D W + + S+ + +
Sbjct: 60 KHENVVSLVEVFLEHADKSVYLLFDY---AEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQ 116
Query: 767 AARGISFLHHGFKPYIIHMDIKTSNILL-NDYFE---AKVSDFGLARLI 811
G+ +LH +++H D+K +NIL+ + E K+ D GLARL
Sbjct: 117 ILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLF 162
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 40/137 (29%), Positives = 57/137 (41%), Gaps = 19/137 (13%)
Query: 734 LVYEYMVNGSLDDWLRNRAASLDWGK----RCKIAYGAARGISFLHHGFKPYIIHMDIKT 789
+V EYM G L + + N W + +A A + F IH D+K
Sbjct: 120 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---------IHRDVKP 170
Query: 790 SNILLNDYFEAKVSDFGLARLISDCESHVSTDTA-DTIGYVPSEY----GQAGRANERGD 844
N+LL+ K++DFG ++ E V DTA T Y+ E G G D
Sbjct: 171 DNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 229
Query: 845 IYSFGVILLELVTGKQP 861
+S GV L E++ G P
Sbjct: 230 WWSVGVFLYEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 668 VIGGGGF------RTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ 721
V+G GGF + G M K + K++ + G+ E L+ V + +V
Sbjct: 7 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEA--MALNEKRILEKVNSRFVVS 64
Query: 722 LLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR--GISFLHHGF 778
L Y ++ L LV M G L + N + ++ I Y A G+ L
Sbjct: 65 L-AYAYETKDALCLVLTIMNGGDLKFHIYNMGNP-GFDEQRAIFYAAELCCGLEDLQ--- 119
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGR 838
+ I++ D+K NILL+D ++SD GLA I + E+ T+GY+ E +
Sbjct: 120 RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET--VRGRVGTVGYMAPEVINNEK 177
Query: 839 ANERGDIYSFGVILLELVTGKQP 861
D + G ++ E++ G+ P
Sbjct: 178 YTFSPDWWGLGCLIYEMIQGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 3e-04
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 711 LDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARG 770
+ V H +L + G C G E ++V E++ +G LD LR + + +A A
Sbjct: 70 MSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASA 129
Query: 771 ISFLHHGFKPYIIHMDIKTSNILL-------NDYFEAKVSDFGLARLISDCESHVSTDTA 823
+S+L ++H ++ NILL K+SD G++ E V
Sbjct: 130 LSYLE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERV----- 181
Query: 824 DTIGYVPSEYGQAGRA-NERGDIYSFGVILLEL 855
+ I ++ E G + + D +SFG LLE+
Sbjct: 182 ERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 4e-04
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
Query: 715 KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
KH L L + V EY VNG + R+ D + A + FL
Sbjct: 54 KHPFLTALHCCFQTKDRLFFVMEY-VNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFL 112
Query: 775 H-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY 833
H HG +I+ D+K NILL+ K++DFG+ + +T T Y+ E
Sbjct: 113 HRHG----VIYRDLKLDNILLDAEGHCKLADFGMCKE-GILNGVTTTTFCGTPDYIAPEI 167
Query: 834 GQAGRANERGDIYSFGVILLELVTGKQPTGPEFED 868
Q D ++ GV++ E++ G+ P + ED
Sbjct: 168 LQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED 202
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 5e-04
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 665 FENVIGGGGF-----RTAFK-GTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMV---- 714
F +G G F TAF G + VAVK L +A+ D E A M L ++
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKML-KASAHTD-EREALMSELKILSHLG 99
Query: 715 KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRA 752
+H+N+V LLG C+ G L++ EY G L ++LR +A
Sbjct: 100 QHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKA 137
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 6e-04
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 768 ARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTI 826
A G+ FLH II+ D+K N++L+ K++DFG+ + + V+T T T
Sbjct: 111 AIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENMWDGVTTKTFCGTP 165
Query: 827 GYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869
Y+ E + D ++FGV+L E++ G+ P E ED+
Sbjct: 166 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 208
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 6e-04
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 25/93 (26%)
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN- 840
IIH D+KT NI L++ A + DFG A C+ DT P YG +G
Sbjct: 206 IIHRDVKTENIFLDEPENAVLGDFGAA-----CKLDAHPDT-------PQCYGWSGTLET 253
Query: 841 ------------ERGDIYSFGVILLELVTGKQP 861
+ DI+S G++L E+
Sbjct: 254 NSPELLALDPYCAKTDIWSAGLVLFEMSVKNVT 286
|
Length = 392 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 7e-04
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 707 EMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRC----- 761
E+ L + H N+V+LL + LV+E+ LD L+ S
Sbjct: 48 EISLLKELNHPNIVRLLDVVHSENKLYLVFEF-----LDLDLKKYMDSSPLTGLDPPLIK 102
Query: 762 KIAYGAARGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809
Y +GI++ H H ++H D+K N+L++ K++DFGLAR
Sbjct: 103 SYLYQLLQGIAYCHSH----RVLHRDLKPQNLLIDREGALKLADFGLAR 147
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 7e-04
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 665 FENVIGGGGFRTAFKGTMPDQK--TVAVKKLSQAT----GQCDREFAAEMETLDMVKHQN 718
F +G G F T ++ VA+K+ ++ Q D F+ E + L+ + H
Sbjct: 34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFS-ERKILNYINHPF 92
Query: 719 LVQLLGYCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFLHHG 777
V L G LV E+++ G +LR N+ D G + AA+ + +
Sbjct: 93 CVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVG-----CFYAAQIVLIFEYL 147
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG 837
I++ D+K N+LL+ K++DFG A+++ D ++ T + I P G
Sbjct: 148 QSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV-DTRTYTLCGTPEYIA--PEILLNVG 204
Query: 838 RANERGDIYSFGVILLELVTGKQP 861
+ D ++ G+ + E++ G P
Sbjct: 205 HG-KAADWWTLGIFIYEILVGCPP 227
|
Length = 340 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 7e-04
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 764 AYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA 823
++ ARG+ FL IH D+ NILL++ K+ DFGLAR I +V +A
Sbjct: 180 SFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSA 236
Query: 824 D-TIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
+ ++ E + D++SFGV+L E+ + G P
Sbjct: 237 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASP 276
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 9e-04
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 17/178 (9%)
Query: 707 EMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAY 765
E L +H L L + V EY+ G L L R R S D R + Y
Sbjct: 45 ESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSED---RTRF-Y 100
Query: 766 GA--ARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL-ISDCESHVSTDT 822
GA + +LH G I++ D+K N++L+ K++DFGL + I+D + +
Sbjct: 101 GAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT--F 155
Query: 823 ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLL 880
T Y+ E + D + GV++ E++ G+ P F ++D L + +L+
Sbjct: 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP----FYNQDHEKLFELILM 209
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.001
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAK 801
S D+ + LD + + A+G+ FL IH D+ N+LL D AK
Sbjct: 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAK 252
Query: 802 VSDFGLARLISDCESHVSTDTAD-TIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GK 859
+ DFGLAR I + ++V A + ++ E + D++S+G++L E+ + GK
Sbjct: 253 ICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGK 312
Query: 860 QP 861
P
Sbjct: 313 SP 314
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.001
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 30/168 (17%)
Query: 705 AAEMETLDMVKHQNLVQLLGYCSVGEEKLL--VYEYMVNGSLDDWLR------NRAASLD 756
A E L + H +V + CS +E + + E++V G L LR N A
Sbjct: 66 AQEKSILMELSHPFIVNM--MCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKF- 122
Query: 757 WGKRCKIAYGAARGISF--LHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814
Y A ++F LH II+ D+K N+LL++ KV+DFG A+ + D
Sbjct: 123 --------YHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD- 170
Query: 815 ESHVSTDT-ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
T T T Y+ E Q+ + D ++ GV+L E + G P
Sbjct: 171 ----RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPP 214
|
Length = 329 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.001
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 27/173 (15%)
Query: 702 REFAAEMETLDMVKHQNLVQLLGY--------CSVGEEKLLVYEYMVNGSLDDWLRNRAA 753
E++ L + N++++ G+ + L+ EY G L + L
Sbjct: 63 DITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRL----SLILEYCTRGYLREVLDKEK- 117
Query: 754 SLDWGKRCKIAYGAARGISFLHHGF-KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812
L + + +A +G+ L+ KPY ++ + + L+ + ++ K+ GL +++S
Sbjct: 118 DLSFKTKLDMAIDCCKGLYNLYKYTNKPY---KNLTSVSFLVTENYKLKIICHGLEKILS 174
Query: 813 DCESHVSTDTA----DTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
+ + SEY + DIYS GV+L E+ TGK P
Sbjct: 175 SPPFKNVNFMVYFSYKMLNDIFSEY------TIKDDIYSLGVVLWEIFTGKIP 221
|
Length = 283 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 42/219 (19%)
Query: 669 IGGGGFRTAFKG-TMPDQKTVAVKKLSQATGQCDREFAA-------EMETLDMVKHQNLV 720
IG G F FK ++ VA+KK+ + E E++ L ++KH+N+V
Sbjct: 20 IGQGTFGEVFKARHKKTKQIVALKKV-----LMENEKEGFPITALREIKILQLLKHENVV 74
Query: 721 QLLGYCSVGEEK--------LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGIS 772
L+ C LV+E+ + L L N+ + K+ G+
Sbjct: 75 NLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLY 133
Query: 773 FLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES---HVSTDTADTIGYV 829
++H I+H D+K +NIL+ K++DFGLAR S ++ + T+ T+ Y
Sbjct: 134 YIHRN---KILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYR 190
Query: 830 PSE-------YGQAGRANERGDIYSFGVILLELVTGKQP 861
P E YG D++ G I+ E+ T + P
Sbjct: 191 PPELLLGERDYGPP------IDMWGAGCIMAEMWT-RSP 222
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.002
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 185 QLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE-IGNLKKLSDLYL 240
L+ LDLS+N L+ +P K L +L LD+S N L+ I PE L L L L
Sbjct: 1 NLKSLDLSNNRLT-VIPDGAFKGLPNLKVLDLSGNNLTS-ISPEAFSGLPSLRSLDL 55
|
Length = 60 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.002
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 16/76 (21%)
Query: 406 NIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSL 465
N++ L L++N I F +L LDL NNL + P +
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNL----------------TSISPEAF 44
Query: 466 SRLTNLTTLNLFGNLL 481
S L +L +L+L GN L
Sbjct: 45 SGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.002
Identities = 59/222 (26%), Positives = 86/222 (38%), Gaps = 24/222 (10%)
Query: 668 VIGGGGF----------RTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQ 717
VIG G F +F QK +KK Q +R L +KH
Sbjct: 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNV-----LLKNLKHP 56
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
LV L E+ V +Y+ G L L+ L+ R A A I +LH
Sbjct: 57 FLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAE-VASAIGYLH-- 113
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG 837
II+ D+K NILL+ ++DFGL + + E ST T Y+ E +
Sbjct: 114 -SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTST-FCGTPEYLAPEVLRKE 171
Query: 838 RANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
+ D + G +L E++ G P F +D + D +L
Sbjct: 172 PYDRTVDWWCLGAVLYEMLYGL----PPFYSRDVSQMYDNIL 209
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFG-LARLISD--CESHVSTDTADTIGYVPSEYGQA- 836
+ +H DIK NIL++ +++DFG +L+ D +S V+ T D Y+ E QA
Sbjct: 122 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPD---YISPEILQAM 178
Query: 837 ----GRANERGDIYSFGVILLELVTGKQP 861
G+ D +S GV + E++ G+ P
Sbjct: 179 EDGKGKYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 764 AYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST-DT 822
++ A+G+ FL IH D+ NILL++ K+ DFGLAR I +V D
Sbjct: 185 SFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241
Query: 823 ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
+ ++ E + D++SFGV+L E+ + G P
Sbjct: 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 281
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.003
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 754 SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813
+LD +Y A+G+SFL IH D+ NILL K+ DFGLAR I +
Sbjct: 210 ALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRN 266
Query: 814 CESHVSTDTAD-TIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
++V A + ++ E D++S+G++L E+ + G P
Sbjct: 267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSP 316
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|215633 PLN03210, PLN03210, Resistant to P | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.004
Identities = 59/260 (22%), Positives = 88/260 (33%), Gaps = 85/260 (32%)
Query: 345 FTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNL 404
TG+ + L S+NL E ++S A LE L LS ++P I L
Sbjct: 633 LTGLRNIDLRGSKNLKEIP------------DLSMATNLETLKLSDCSSLVELPSSIQYL 680
Query: 405 TNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN-------NLNGCVVVVYLLLNNNML 457
KL ++ C +L L G N NL+GC
Sbjct: 681 N-----KLED--------LDMSRCENLEILPTGINLKSLYRLNLSGC------------- 714
Query: 458 SGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGH--------------- 502
++ TN++ L+L + EF +L+++ L
Sbjct: 715 -SRLKSFPDISTNISWLDLDETAIE-----EFPSNLRLENLDELILCEMKSEKLWERVQP 768
Query: 503 -NQLTGSIPESLG--YLSGNKLYGSVPTSFGNLNGLTHLDL-SCNELDGIVGLYVQSNKF 558
L + SL +LS +P+S NL+ L HL++ +C L
Sbjct: 769 LTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINL------------- 815
Query: 559 YGEIPPELGNLVQLEYLDFS 578
E P NL LE LD S
Sbjct: 816 --ETLPTGINLESLESLDLS 833
|
syringae 6; Provisional. Length = 1153 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 770 GISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI-- 826
G+ FLH G II+ D+K N+LL+ K++DFG+ + E + T T
Sbjct: 108 GLQFLHERG----IIYRDLKLDNVLLDSEGHIKIADFGMCK-----EGILGGVTTSTFCG 158
Query: 827 --GYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFED 868
Y+ E D ++ GV+L E++ G+ P + ED
Sbjct: 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED 202
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.004
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 783 IHMDIKTSNILLNDYFEAKVSDFG-LARLISD--CESHVSTDTADTIGYVPSEYGQA--- 836
+H DIK N+LL+ +++DFG RL++D +S+V+ T D Y+ E QA
Sbjct: 124 VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPD---YISPEILQAMED 180
Query: 837 --GRANERGDIYSFGVILLELVTGKQP 861
GR D +S GV + E++ G+ P
Sbjct: 181 GKGRYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 885 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.98 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.98 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.98 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.98 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.98 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.98 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.97 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.97 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.97 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.97 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.97 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.97 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.97 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.97 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.97 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.97 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.97 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.97 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.97 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.97 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.97 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.97 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.97 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.97 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.97 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.97 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.97 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.97 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.97 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.97 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.97 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.97 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.97 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.97 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.97 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.97 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.97 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.97 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.97 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.97 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.97 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.97 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.97 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.97 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.97 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.97 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.97 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.97 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.96 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.96 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.96 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.96 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.96 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.96 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.96 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.96 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.96 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.96 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.96 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.96 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.96 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.96 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.96 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.96 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.96 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.96 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.96 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.96 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.96 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.96 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.96 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.96 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.96 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.96 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.96 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.96 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.96 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.96 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.96 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.96 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.96 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.96 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.96 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.96 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.96 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.96 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.96 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.96 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.96 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.96 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.96 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.96 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.96 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.96 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.96 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.96 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.96 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.96 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.96 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.96 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.96 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.96 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.96 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.96 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.96 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.96 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.96 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.96 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.95 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.95 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.95 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.95 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.95 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.95 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.95 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.95 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.95 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.95 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.95 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.95 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.95 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.95 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.95 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.95 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.95 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.95 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.95 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.95 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.95 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.95 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.95 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.95 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.95 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.95 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.95 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.95 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.95 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.95 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.95 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.95 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.95 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.95 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.95 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.95 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.95 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.95 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.95 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.95 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.95 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.95 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.95 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.95 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.95 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.95 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.95 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.95 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.95 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.95 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.95 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.95 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.95 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.95 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.95 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.95 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.95 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.95 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.95 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.95 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.95 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.95 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.95 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.95 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.95 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.95 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.95 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.95 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.95 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.95 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.95 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.94 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.94 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.94 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.94 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.94 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.94 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.94 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.94 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.94 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.94 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.94 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.94 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.94 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.94 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.94 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.94 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.94 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.94 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.94 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.94 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.94 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.94 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.94 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.94 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.94 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.94 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.94 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.94 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.94 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.94 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.94 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.94 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.93 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.93 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.93 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.93 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.93 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.93 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.93 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.93 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.93 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.93 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.92 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.92 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.92 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.92 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.92 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.91 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.91 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.91 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.91 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.91 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.9 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.9 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.9 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.9 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.9 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.89 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.89 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.89 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.89 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.89 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.88 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.87 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.87 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.85 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.85 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.85 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.81 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.81 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.79 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.77 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.77 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.77 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.77 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.76 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.75 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.75 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.73 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.73 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.71 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.68 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.68 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.68 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.67 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.66 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.66 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.64 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.62 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.6 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.6 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.58 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.56 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.52 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.51 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.51 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.49 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.47 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.45 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.37 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.36 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.35 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.35 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.34 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.29 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.29 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.19 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.17 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.16 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.16 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.14 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.11 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.1 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.1 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.08 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.07 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.06 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.02 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.0 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.0 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.97 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.94 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.92 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.9 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.84 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.84 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.82 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.79 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.78 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.77 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.76 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.7 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.6 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.6 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 98.57 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.55 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.53 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.45 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.44 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.41 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.38 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.37 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.34 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.3 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-104 Score=985.73 Aligned_cols=803 Identities=33% Similarity=0.576 Sum_probs=695.5
Q ss_pred CHHHHHHHHHHHHhCCCC-CCCCCCCCCCCCcccCCccccC-CcEEEEEEecccccccccccccCCCCCCEEecCCCccc
Q 047790 24 PKQERRSLVHFKNSLQNP-QVLSGWNKTTRHCHWFGVKCRH-SRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLF 101 (885)
Q Consensus 24 ~~~~~~aLl~~k~~~~~~-~~~~~w~~~~~~c~w~gv~c~~-~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~ 101 (885)
.++|++||++||+++.++ ..+.+|+.+.+||.|.||+|+. .+|+.++++++++.|.+++.+..+++|++|||++|.++
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~ 106 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLS 106 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccC
Confidence 668999999999999765 4688998888999999999985 49999999999999999999999999999999999999
Q ss_pred CcCCcCcc-CcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCccc
Q 047790 102 GQLSPQVS-NLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRL 180 (885)
Q Consensus 102 ~~~~~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 180 (885)
+.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+|++|.+++.+|..++.+++|++|+|++|.+.+.+|..+
T Consensus 107 ~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 184 (968)
T PLN00113 107 GPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL 184 (968)
T ss_pred CcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhh
Confidence 99988765 999999999999999998886 568999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccC
Q 047790 181 GDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGN 260 (885)
Q Consensus 181 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~ 260 (885)
+++++|++|+|++|.+++.+|.. +.++++|++|++++|++++.+|..++++++|++|+++.|.. .+.+|..+++
T Consensus 185 ~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l-----~~~~p~~l~~ 258 (968)
T PLN00113 185 TNLTSLEFLTLASNQLVGQIPRE-LGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNL-----TGPIPSSLGN 258 (968)
T ss_pred hhCcCCCeeeccCCCCcCcCChH-HcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCcee-----ccccChhHhC
Confidence 99999999999999999888876 89999999999999999999999999999999999976642 5678999999
Q ss_pred CCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEE
Q 047790 261 CSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFD 339 (885)
Q Consensus 261 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~ 339 (885)
+++|++|++++|++++.+|..+..+.+|++|++++|.+++.+|..+..+++|+.|++++|.+.+.+|..+..+ .|+.|+
T Consensus 259 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 338 (968)
T PLN00113 259 LKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQ 338 (968)
T ss_pred CCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988887 799999
Q ss_pred eecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccC
Q 047790 340 LQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDG 419 (885)
Q Consensus 340 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 419 (885)
+++|++++.+|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|++.+.+|..+..+++|+.|++++|++++
T Consensus 339 L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~ 418 (968)
T PLN00113 339 LWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSG 418 (968)
T ss_pred CcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccCCCCcccEEEcCCcccCccee--------EEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCccc
Q 047790 420 IIPMEFGDCISLNTLDLGSNNLNGCVV--------VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGD 491 (885)
Q Consensus 420 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 491 (885)
.+|..|..+++|+.|++++|++++.++ ++.|++++|.+.+.+|..+ ..++|+.|++++|++++.+|..+.+
T Consensus 419 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~ 497 (968)
T PLN00113 419 ELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGS 497 (968)
T ss_pred ECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhh
Confidence 999999999999999999999976543 3456777777777776655 3467777777777777777777777
Q ss_pred ccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccc
Q 047790 492 SLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQ 571 (885)
Q Consensus 492 l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~ 571 (885)
+++|+.|++++|+++|.+ |..++.+++|+.|+|+ +|.++|.+|..++++++
T Consensus 498 l~~L~~L~Ls~N~l~~~~----------------p~~~~~l~~L~~L~Ls-------------~N~l~~~~p~~~~~l~~ 548 (968)
T PLN00113 498 LSELMQLKLSENKLSGEI----------------PDELSSCKKLVSLDLS-------------HNQLSGQIPASFSEMPV 548 (968)
T ss_pred hhccCEEECcCCcceeeC----------------ChHHcCccCCCEEECC-------------CCcccccCChhHhCccc
Confidence 777777777777777655 7888999999999999 66667889999999999
Q ss_pred ccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccccccccccccCCccccccccC---Cccccccccc--
Q 047790 572 LEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMG---SDCQILTFGK-- 646 (885)
Q Consensus 572 L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~~---~~c~~~~~~~-- 646 (885)
|++|||++|+++|.+|..+..+++|++|++++|+++|.+|..+++.++...++.||+.+|+.+.+ ..|.......
T Consensus 549 L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~ 628 (968)
T PLN00113 549 LSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSW 628 (968)
T ss_pred CCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcccccccee
Confidence 99999999999999999999999999999999999999999999999999999999999985422 2354321111
Q ss_pred eeEEEeEeecee---------e--------------------------------------eeEEeecceecccCCceEEE
Q 047790 647 LALVGIVVGSVL---------V--------------------------------------IAIIVFENVIGGGGFRTAFK 679 (885)
Q Consensus 647 ~~~~g~~~g~~~---------~--------------------------------------~~~~~~~~~lG~G~~g~vy~ 679 (885)
..+++.++++.+ + ...+...+.||+|+||.||+
T Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~ 708 (968)
T PLN00113 629 WFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYK 708 (968)
T ss_pred eeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEE
Confidence 111110000000 0 01123346899999999999
Q ss_pred EEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHH
Q 047790 680 GTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWG 758 (885)
Q Consensus 680 a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~ 758 (885)
|++ .+++.||+|++...... ...|++++++++||||+++++++.+++..++||||+++|+|.++++. +++.
T Consensus 709 ~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----l~~~ 780 (968)
T PLN00113 709 GKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWE 780 (968)
T ss_pred EEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc----CCHH
Confidence 987 46899999998654322 23468889999999999999999999999999999999999999963 7889
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCC
Q 047790 759 KRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGR 838 (885)
Q Consensus 759 ~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 838 (885)
.+..++.|+++|++|+|+.++.+|+|||+||+||+++.++.+++. ||.+..... .....++..|+|||++.+..
T Consensus 781 ~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~ 854 (968)
T PLN00113 781 RRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-----DTKCFISSAYVAPETRETKD 854 (968)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-----CCCccccccccCcccccCCC
Confidence 999999999999999997667899999999999999988887775 554433221 12235788999999999999
Q ss_pred CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHH
Q 047790 839 ANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLL 880 (885)
Q Consensus 839 ~~~~~DvwslGvvl~elltg~~P~~~~~~~~~~~~l~~~~~~ 880 (885)
++.++|||||||++|||+||+.||+..... ...+++|++.
T Consensus 855 ~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~--~~~~~~~~~~ 894 (968)
T PLN00113 855 ITEKSDIYGFGLILIELLTGKSPADAEFGV--HGSIVEWARY 894 (968)
T ss_pred CCcccchhhHHHHHHHHHhCCCCCCcccCC--CCcHHHHHHH
Confidence 999999999999999999999999654332 2345666554
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-60 Score=595.81 Aligned_cols=510 Identities=37% Similarity=0.571 Sum_probs=464.7
Q ss_pred CCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCcccc-ccccccEeeeeccCCCCCCCccccCCccCceEE
Q 047790 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLG-LLTRLETISLRSNSFTGEMPSELGDIKQLKSLD 166 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 166 (885)
.+++.|||++|.+++.+++.|..+++|++|+|++|++++.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~ 146 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLD 146 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEE
Confidence 4688999999999999999999999999999999999999998765 899999999999999988886 5689999999
Q ss_pred ccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccc
Q 047790 167 FSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQ 246 (885)
Q Consensus 167 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~ 246 (885)
|++|.+++.+|..++++++|++|+|++|.+.+.+|.. +.++++|++|++++|++++.+|..++++++|+.|+++.|..
T Consensus 147 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l- 224 (968)
T PLN00113 147 LSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNS-LTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNL- 224 (968)
T ss_pred CcCCcccccCChHHhcCCCCCEEECccCcccccCChh-hhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCcc-
Confidence 9999999999999999999999999999999888876 88999999999999999999999999999999999976653
Q ss_pred ccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCC
Q 047790 247 LSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSI 326 (885)
Q Consensus 247 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 326 (885)
.+.+|..++++++|++|++++|++++.+|..+..+++|++|++++|.+++..|..+..+++|++|++++|.+.+.+
T Consensus 225 ----~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 300 (968)
T PLN00113 225 ----SGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI 300 (968)
T ss_pred ----CCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCC
Confidence 5678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccc
Q 047790 327 PEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLT 405 (885)
Q Consensus 327 p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 405 (885)
|..+..+ .|+.|++++|.+++..|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++++.+|..+..++
T Consensus 301 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~ 380 (968)
T PLN00113 301 PELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSG 380 (968)
T ss_pred ChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcC
Confidence 9988877 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCC
Q 047790 406 NIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSI 485 (885)
Q Consensus 406 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 485 (885)
+|+.|++++|++.+.+|..+..+++|+.|++++|+++ +.+|..+..+++|+.|++++|++++.+
T Consensus 381 ~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~----------------~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 444 (968)
T PLN00113 381 NLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFS----------------GELPSEFTKLPLVYFLDISNNNLQGRI 444 (968)
T ss_pred CCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEee----------------eECChhHhcCCCCCEEECcCCcccCcc
Confidence 9999999999999999999999999999999999885 456777777778888888888887777
Q ss_pred CCCcccccccceeeeccccceeccccccc-------cccCCccCCCCCccccccccCcEEEccCCCCCCceeeeeccccc
Q 047790 486 PPEFGDSLKVQGLYLGHNQLTGSIPESLG-------YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKF 558 (885)
Q Consensus 486 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-------~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l 558 (885)
|..+..+++|+.|++++|+++|.+|..+. ++++|++++.+|..|.++++|+.|+|+ +|++
T Consensus 445 ~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls-------------~N~l 511 (968)
T PLN00113 445 NSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLS-------------ENKL 511 (968)
T ss_pred ChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECc-------------CCcc
Confidence 77777777788888888887777775432 356777777778899999999999999 5666
Q ss_pred ccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC-ccccccccccccCCccccccc
Q 047790 559 YGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GICQNLSIISLTGNKDLCEKI 634 (885)
Q Consensus 559 ~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c~~~ 634 (885)
+|.+|..++++++|++|+|++|+++|.+|..+..+++|++|+|++|+++|.+|.. ..+..+..+++++|+..+.-|
T Consensus 512 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 512 SGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred eeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 7789999999999999999999999999999999999999999999999988864 567789999999999876433
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-46 Score=376.40 Aligned_cols=491 Identities=29% Similarity=0.441 Sum_probs=399.8
Q ss_pred EEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeec
Q 047790 66 VVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145 (885)
Q Consensus 66 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 145 (885)
...++++++++. .+.+.+.+|..|++|++++|+++ ..|++++.+.+++.|+.++|+++ .+|.+++.+.+|+.|++++
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 456677778776 46677889999999999999996 78999999999999999999999 8999999999999999999
Q ss_pred cCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccC
Q 047790 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNI 225 (885)
Q Consensus 146 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~ 225 (885)
|.+. .+|+.++.+..|+.|+..+|+++ ..|+.+..+.+|..|++.+|++. .+|+.... ++.|++||..+|.++ .+
T Consensus 124 n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~-m~~L~~ld~~~N~L~-tl 198 (565)
T KOG0472|consen 124 NELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHIA-MKRLKHLDCNSNLLE-TL 198 (565)
T ss_pred ccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHHH-HHHHHhcccchhhhh-cC
Confidence 9999 88999999999999999999999 88899999999999999999998 78877666 999999999999997 89
Q ss_pred CccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccccccccc-CCCCCcEEEccCCCCcCcccc
Q 047790 226 PPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC-NSGSLVEINLDGNMLSGTIED 304 (885)
Q Consensus 226 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~~~ 304 (885)
|+.++.|.+|+.||+..|. ...+| +|..|+.|++|+++.|+|. .+|...+ ++.++..|||.+|+++.. |+
T Consensus 199 P~~lg~l~~L~~LyL~~Nk------i~~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklke~-Pd 269 (565)
T KOG0472|consen 199 PPELGGLESLELLYLRRNK------IRFLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLKEV-PD 269 (565)
T ss_pred ChhhcchhhhHHHHhhhcc------cccCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccccC-ch
Confidence 9999999999999997665 33455 8999999999999999999 6777665 899999999999999954 56
Q ss_pred cccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCcc--ccceeec-------ccccc----cC
Q 047790 305 VFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSE--NLMEFNA-------ASNLL----EG 371 (885)
Q Consensus 305 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~l-------~~N~l----~~ 371 (885)
.++.+++|++||+|+|.|++ .|..++.+.|+.|.+.+|.+...-.+-+..-+ -|++|.- +.-+= .+
T Consensus 270 e~clLrsL~rLDlSNN~is~-Lp~sLgnlhL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~ 348 (565)
T KOG0472|consen 270 EICLLRSLERLDLSNNDISS-LPYSLGNLHLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAM 348 (565)
T ss_pred HHHHhhhhhhhcccCCcccc-CCcccccceeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccC
Confidence 67889999999999999995 56667777999999999998754333222111 1222211 11100 00
Q ss_pred C-Ccccc---cccccccEEEccCCcccccCccccccccc---ccceecccccccCcCCCccCCCCcccE-EEcCCcccCc
Q 047790 372 S-LSWEI---SNAVALEKLDLSSNMLTRQIPKKIGNLTN---IQILKLNSNFFDGIIPMEFGDCISLNT-LDLGSNNLNG 443 (885)
Q Consensus 372 ~-~~~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~~L~~-L~Ls~N~l~~ 443 (885)
. .++.| ....+.+.|++++-+++. +|.......+ ....+++.|++. .+|..+..++.+.+ +.++.|.+.
T Consensus 349 t~~~~~~~~~~~~i~tkiL~~s~~qlt~-VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is- 425 (565)
T KOG0472|consen 349 TLPSESFPDIYAIITTKILDVSDKQLTL-VPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS- 425 (565)
T ss_pred CCCCCcccchhhhhhhhhhccccccccc-CCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-
Confidence 1 11222 235678999999999985 4554433333 788999999998 68888887776654 556666654
Q ss_pred ceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCC
Q 047790 444 CVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYG 523 (885)
Q Consensus 444 ~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~ 523 (885)
.+|..++.+++|+.|+|++|.+. .+|.+++.+..|+.|++|+|+|.
T Consensus 426 ----------------fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr----------------- 471 (565)
T KOG0472|consen 426 ----------------FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR----------------- 471 (565)
T ss_pred ----------------cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-----------------
Confidence 77889999999999999999998 79999999999999999999987
Q ss_pred CCCccccccccCcEEEccCCCCCCceeeeecccccccccch-hccCcccccccccccccCCCCCCccccCccccceeecc
Q 047790 524 SVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPP-ELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLA 602 (885)
Q Consensus 524 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~-~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~ 602 (885)
.+|..+..+..|+.+-.++|++. .+|+ .+.+|.+|..|||.+|.+. .||+.+++|++|++|+++
T Consensus 472 ~lP~~~y~lq~lEtllas~nqi~--------------~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~ 536 (565)
T KOG0472|consen 472 MLPECLYELQTLETLLASNNQIG--------------SVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELD 536 (565)
T ss_pred cchHHHhhHHHHHHHHhcccccc--------------ccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEec
Confidence 66888888888888888877776 4444 4899999999999999998 899999999999999999
Q ss_pred cCcCCCCCCCCcc-c-cccccccccCCc
Q 047790 603 DNRLEGEVPRSGI-C-QNLSIISLTGNK 628 (885)
Q Consensus 603 ~N~l~~~~p~~~~-~-~~~~~~~~~~N~ 628 (885)
+|++. .|+... . .+...+.|-+++
T Consensus 537 gNpfr--~Pr~~iLmkgT~aiL~ylrdr 562 (565)
T KOG0472|consen 537 GNPFR--QPRHQILMKGTAAILSYLRDR 562 (565)
T ss_pred CCccC--CCHHHHhccChHHHHHHhccc
Confidence 99998 343322 2 233445555554
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-46 Score=377.20 Aligned_cols=478 Identities=29% Similarity=0.404 Sum_probs=374.6
Q ss_pred cCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCce
Q 047790 85 FNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKS 164 (885)
Q Consensus 85 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 164 (885)
+.-..|+.|++++|.++ .+.+.+.++..|++|++++|+++ ..|++++.+..++.|+.++|+++ .+|+.++.+.+|+.
T Consensus 42 W~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~ 118 (565)
T KOG0472|consen 42 WEQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVK 118 (565)
T ss_pred hhhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhh
Confidence 34456888999999986 56677899999999999999999 78999999999999999999999 89999999999999
Q ss_pred EEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccc
Q 047790 165 LDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGP 244 (885)
Q Consensus 165 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 244 (885)
|+.++|.+. .+|+.++.+..|+.|+..+|+++ ++|.+ +.++.+|..|++.+|+++...|..+ +|+.|+++++..|.
T Consensus 119 l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~-~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~ 194 (565)
T KOG0472|consen 119 LDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPED-MVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNL 194 (565)
T ss_pred hhcccccee-ecCchHHHHhhhhhhhccccccc-cCchH-HHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhh
Confidence 999999999 88888999999999999999998 88887 6789999999999999995444444 49999999884433
Q ss_pred ccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCC
Q 047790 245 YQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISG 324 (885)
Q Consensus 245 ~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 324 (885)
.+.+|++++.+.+|..|+|..|+|. ..| .|.++..|++++++.|+|+..+.+....++++..|||.+|+++
T Consensus 195 ------L~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk- 265 (565)
T KOG0472|consen 195 ------LETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK- 265 (565)
T ss_pred ------hhcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-
Confidence 6788999999999999999999988 566 7888888888888888888777777778888888888888887
Q ss_pred CCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCccccccccc--ccEEEc--cCCccc---c-
Q 047790 325 SIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVA--LEKLDL--SSNMLT---R- 395 (885)
Q Consensus 325 ~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~--L~~L~L--s~N~l~---~- 395 (885)
..|..+..+ +|..||+|+|.+++ .|..++++ .|+.|-+.+|.+..+-...+..-+. |++|.= ..-.++ +
T Consensus 266 e~Pde~clLrsL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~ 343 (565)
T KOG0472|consen 266 EVPDEICLLRSLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGG 343 (565)
T ss_pred cCchHHHHhhhhhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccc
Confidence 556655555 57777888887774 45566666 6777777777665433222221111 222210 000000 0
Q ss_pred -----c-Cc---ccccccccccceecccccccCcCCCccCCCCc---ccEEEcCCcccCcceeEEEEeecCCcccCCCch
Q 047790 396 -----Q-IP---KKIGNLTNIQILKLNSNFFDGIIPMEFGDCIS---LNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPG 463 (885)
Q Consensus 396 -----~-~p---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~ 463 (885)
. .+ .....+...++|+++.-+++ .+|+....... ....+++.|++. .+|.
T Consensus 344 ~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-----------------elPk 405 (565)
T KOG0472|consen 344 TETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-----------------ELPK 405 (565)
T ss_pred ccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-----------------hhhh
Confidence 0 01 11223445667777777776 34443333322 556666666664 7888
Q ss_pred hcccCCCCCE-EeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccC
Q 047790 464 SLSRLTNLTT-LNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSC 542 (885)
Q Consensus 464 ~l~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 542 (885)
.+..+..+.+ +++++|.++ -+|..+..+++|..|+|++|-+. .+|.+++.+..|+.||+|.
T Consensus 406 ~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-----------------~LP~e~~~lv~Lq~LnlS~ 467 (565)
T KOG0472|consen 406 RLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-----------------DLPEEMGSLVRLQTLNLSF 467 (565)
T ss_pred hhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-----------------hcchhhhhhhhhheecccc
Confidence 8887777654 566666665 78889999999999999999987 6699999999999999998
Q ss_pred CCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccccccccc
Q 047790 543 NELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSII 622 (885)
Q Consensus 543 N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~ 622 (885)
|++. .+|+.+..+..||.+-.++|++...-|..+.+|.+|..|||.+|.+...||..+.+++++.+
T Consensus 468 NrFr--------------~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hL 533 (565)
T KOG0472|consen 468 NRFR--------------MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHL 533 (565)
T ss_pred cccc--------------cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEE
Confidence 8776 88999999999999999999998544555999999999999999999999999999999999
Q ss_pred cccCCccc
Q 047790 623 SLTGNKDL 630 (885)
Q Consensus 623 ~~~~N~~~ 630 (885)
++.|||..
T Consensus 534 eL~gNpfr 541 (565)
T KOG0472|consen 534 ELDGNPFR 541 (565)
T ss_pred EecCCccC
Confidence 99999976
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=343.56 Aligned_cols=199 Identities=29% Similarity=0.458 Sum_probs=180.9
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccc--ccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQA--TGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
.+++|.+.+.||+|+|++||+|++++ +..||||.+.+. .....+-+..|+++++.++||||+++++++..++..|+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 56789999999999999999998764 888999999766 344456788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC------CcEEEeeccCcc
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY------FEAKVSDFGLAR 809 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~------~~vkl~Dfg~a~ 809 (885)
||||.||+|.++++.++ .+++..++.+..|++.|+++|| +++|+||||||+||+++.. -.+||+|||+|+
T Consensus 88 MEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 99999999999999765 4999999999999999999999 9999999999999999754 458999999999
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
...+ .......+|++.|||||++..++|+.|+|+||+|+++|+|++|+.||.
T Consensus 164 ~L~~--~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~ 215 (429)
T KOG0595|consen 164 FLQP--GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFD 215 (429)
T ss_pred hCCc--hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcc
Confidence 8774 344456789999999999999999999999999999999999999997
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=357.06 Aligned_cols=389 Identities=24% Similarity=0.252 Sum_probs=290.5
Q ss_pred cEeeeeccCCCCCCCccccCC--ccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEe
Q 047790 139 ETISLRSNSFTGEMPSELGDI--KQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDV 216 (885)
Q Consensus 139 ~~L~Ls~N~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~L 216 (885)
..||++.+.+...--..+..+ +.-+.||+|+|+++.+-+..|.++++|+++++.+|.++ .||.. .+...+|+.|+|
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f-~~~sghl~~L~L 132 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRF-GHESGHLEKLDL 132 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccc-cccccceeEEee
Confidence 458888888874322222221 23456999999999888888899999999999999998 88874 344456899999
Q ss_pred ecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCC
Q 047790 217 SNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGN 296 (885)
Q Consensus 217 s~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 296 (885)
.+|.|+..-. +++..++.|+.||||.|.|+...-..|..-.++++|+|++|
T Consensus 133 ~~N~I~sv~s-----------------------------e~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N 183 (873)
T KOG4194|consen 133 RHNLISSVTS-----------------------------EELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASN 183 (873)
T ss_pred eccccccccH-----------------------------HHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccc
Confidence 9998873211 23455677899999999998655567777788999999999
Q ss_pred CCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcc
Q 047790 297 MLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSW 375 (885)
Q Consensus 297 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 375 (885)
.|+.+....|..+.+|..|.|++|+|+...+..|+.+ .|+.|||..|++.-..-..|.++++|+.|.+..|.|......
T Consensus 184 ~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG 263 (873)
T KOG4194|consen 184 RITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDG 263 (873)
T ss_pred cccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCc
Confidence 9998888889888899999999999888777788866 688888888888766566778888888888888888877777
Q ss_pred cccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCC
Q 047790 376 EISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNN 455 (885)
Q Consensus 376 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n 455 (885)
.|..+.++++|+|+.|+++..-..++.++++|+.|+||+|.|..+-++.+..+++|++|+|++|+|+
T Consensus 264 ~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~------------- 330 (873)
T KOG4194|consen 264 AFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT------------- 330 (873)
T ss_pred ceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccc-------------
Confidence 7888888888888888888777778888888888888888888777777777888888888877774
Q ss_pred cccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccC
Q 047790 456 MLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGL 535 (885)
Q Consensus 456 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L 535 (885)
..-+++|..|..|++|+|++|.++..-...|..+.+|+.|||++|.+++.|.. -...|..|++|
T Consensus 331 ---~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IED-------------aa~~f~gl~~L 394 (873)
T KOG4194|consen 331 ---RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIED-------------AAVAFNGLPSL 394 (873)
T ss_pred ---cCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEec-------------chhhhccchhh
Confidence 24456777778888888888887755556677777788888888887766632 13456677777
Q ss_pred cEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeec
Q 047790 536 THLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNL 601 (885)
Q Consensus 536 ~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l 601 (885)
+.|+|-+|+|..|. -.+|..++.||.|||.+|.|...-|.+|..| .|+.|-+
T Consensus 395 rkL~l~gNqlk~I~-------------krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 395 RKLRLTGNQLKSIP-------------KRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVM 446 (873)
T ss_pred hheeecCceeeecc-------------hhhhccCcccceecCCCCcceeecccccccc-hhhhhhh
Confidence 77777766665321 1456667777777777777766666666655 5555444
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=349.97 Aligned_cols=366 Identities=25% Similarity=0.286 Sum_probs=242.3
Q ss_pred CEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCcccccccc
Q 047790 115 KMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194 (885)
Q Consensus 115 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 194 (885)
+.||+++|+++..-+..|.++++|+.+++.+|.++ .+|...+...+|+.|+|.+|.|+.+-.+.+..++.|+.||||.|
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 44566666666555555666666666666666665 55555555555666666666666555555666666666666666
Q ss_pred ccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcc
Q 047790 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKL 274 (885)
Q Consensus 195 ~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 274 (885)
.|+ ++|...|..-.++++|+|++|+|+..--.. |.++.+|..|.|++|++
T Consensus 160 ~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~-----------------------------F~~lnsL~tlkLsrNri 209 (873)
T KOG4194|consen 160 LIS-EIPKPSFPAKVNIKKLNLASNRITTLETGH-----------------------------FDSLNSLLTLKLSRNRI 209 (873)
T ss_pred hhh-cccCCCCCCCCCceEEeecccccccccccc-----------------------------ccccchheeeecccCcc
Confidence 665 555555555556666666666665322222 22333455555555555
Q ss_pred cccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccc
Q 047790 275 SGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSL 353 (885)
Q Consensus 275 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~ 353 (885)
+...+..|..+++|+.|+|..|+|.-..--.|.++++|+.|.|..|.|...-...|-.+ .+++|+|+.|+++.+-..++
T Consensus 210 ttLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~l 289 (873)
T KOG4194|consen 210 TTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWL 289 (873)
T ss_pred cccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccc
Confidence 54444455555555555555555554434445566666666666666655544555444 46666666666666667777
Q ss_pred cCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccE
Q 047790 354 WNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNT 433 (885)
Q Consensus 354 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 433 (885)
+++++|+.|++++|.|..+.++.+.-..+|++|+|++|+|+...+.+|..+..|++|+|++|.++.+-...|..+++|+.
T Consensus 290 fgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~ 369 (873)
T KOG4194|consen 290 FGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHK 369 (873)
T ss_pred cccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhh
Confidence 78888888888888888777777777788888888888888888888888888888888888888777778888888888
Q ss_pred EEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceecccccc
Q 047790 434 LDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESL 513 (885)
Q Consensus 434 L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 513 (885)
|||++|.|+..+. .-...|.+++.|+.|+|.+|++..+.-.+|.++..|+.|||.+|.+...
T Consensus 370 LdLr~N~ls~~IE-------------Daa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSI----- 431 (873)
T KOG4194|consen 370 LDLRSNELSWCIE-------------DAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASI----- 431 (873)
T ss_pred hcCcCCeEEEEEe-------------cchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceee-----
Confidence 8888888764432 2234577788888888888888855556788888888888888887742
Q ss_pred ccccCCccCCCCCccccccccCcEEEcc
Q 047790 514 GYLSGNKLYGSVPTSFGNLNGLTHLDLS 541 (885)
Q Consensus 514 ~~ls~n~l~~~~p~~~~~l~~L~~L~Ls 541 (885)
.|.+|..+ .|+.|-++
T Consensus 432 -----------q~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 432 -----------QPNAFEPM-ELKELVMN 447 (873)
T ss_pred -----------cccccccc-hhhhhhhc
Confidence 37777777 77777665
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-39 Score=324.85 Aligned_cols=203 Identities=27% Similarity=0.318 Sum_probs=182.7
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
-..+|++.++||+|+||.||+++.++ ++.+|+|++++.. ..+.++..+|..++.+++||+|++++-.|++....|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 35679999999999999999998765 8889999998754 2345788999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|+||+.||.|...+++. +.+++..++-++..|+.|+.||| ++||+|||+||+|||++.+|+++|+|||+++..-.
T Consensus 103 Vld~~~GGeLf~hL~~e-g~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~- 177 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQRE-GRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK- 177 (357)
T ss_pred EEeccCCccHHHHHHhc-CCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhccc-
Confidence 99999999999999854 45999999999999999999999 99999999999999999999999999999986433
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
....+...+||+.|||||++.+.+|+.++|.||+|+++|||++|.+||....
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~ 229 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED 229 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc
Confidence 2234445799999999999999999999999999999999999999997654
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=330.30 Aligned_cols=200 Identities=25% Similarity=0.375 Sum_probs=183.2
Q ss_pred eEEeecceecccCCceEEEEEe-CCCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.+|..++.||+|||+.||+++. ..|+.||+|++.+.. ....+...+|++|.++++||||++++++|++.++.|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5799999999999999999998 679999999998643 334577899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|+|..++|..+.+ +.+.+++..++.+.+||+.|+.||| +.+|+|||+|-.|++++++.+|||+|||+|.....+ .
T Consensus 98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~-~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD-G 172 (592)
T ss_pred EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCc-c
Confidence 9999999999988 5566999999999999999999999 999999999999999999999999999999988753 2
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+...+.+||+.|.|||++...+++..+||||+||+||-|+.|++||...
T Consensus 173 Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk 221 (592)
T KOG0575|consen 173 ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK 221 (592)
T ss_pred cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc
Confidence 3445679999999999999999999999999999999999999999753
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=318.53 Aligned_cols=205 Identities=26% Similarity=0.383 Sum_probs=176.3
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccc-------cHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQ-------CDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~-------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
....|.+.+.+|+|+||.|-+|.. .+|+.||+|++++.... ...+..+|+++|++++||+|++++++|+..+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 445689999999999999999964 56999999999764321 1234679999999999999999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC---CcEEEeeccC
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY---FEAKVSDFGL 807 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~---~~vkl~Dfg~ 807 (885)
+.||||||++||+|.+.+-... .+.+.....+++|++.|+.||| ++||+||||||+||++..+ ..+||+|||+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccch
Confidence 9999999999999999987544 3788888999999999999999 9999999999999999755 6799999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCC---CCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRA---NERGDIYSFGVILLELVTGKQPTGPEFEDK 869 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---~~~~DvwslGvvl~elltg~~P~~~~~~~~ 869 (885)
|+..+. ...-.+.+||+.|.|||++.+..+ ..+.|+||+||++|-+++|.+||.....+.
T Consensus 326 AK~~g~--~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~ 388 (475)
T KOG0615|consen 326 AKVSGE--GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP 388 (475)
T ss_pred hhcccc--ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc
Confidence 998763 233346799999999999988764 347799999999999999999998665544
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=303.17 Aligned_cols=202 Identities=24% Similarity=0.287 Sum_probs=183.6
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
....+|++.++||.|+||.|..++.+. |.-+|+|++.+... ...++..+|.++++++.||+++++++.+.+.+..|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 455789999999999999999998764 78899999986542 23467889999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
|||||++||.+.+++++. +++++..++.+|.+++.|++|+| +.+|++||+||+||++|.+|.+||+|||+|++...
T Consensus 121 mvmeyv~GGElFS~Lrk~-~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS-GRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred EEEeccCCccHHHHHHhc-CCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 999999999999999864 45999999999999999999999 99999999999999999999999999999998654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
...+.+||+.|+|||+++.+++..++|.|||||++|||+.|++||....+
T Consensus 197 ----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 197 ----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred ----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 35678999999999999999999999999999999999999999976544
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=306.42 Aligned_cols=204 Identities=25% Similarity=0.319 Sum_probs=175.7
Q ss_pred eEEeecceecccCCceEEEEEe-CCCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceee-eeEeCCe-eEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLG-YCSVGEE-KLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~-~~~~~~~-~~lv 735 (885)
..|+|.++||+|.||.||+|.. .+|+.+|.|.+.=.. ....+++..|+.++++++||||+++++ .|..+.. .++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 4599999999999999999974 579999999986222 233457889999999999999999998 4544444 7899
Q ss_pred EecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCC-ceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 736 YEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPY-IIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~-i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
|||+.+|+|...++. ..+.+++..+++++.|++.|+..+|....+| |.||||||.||+++..|.||++|||+++..
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999999874 4566999999999999999999999432232 899999999999999999999999999988
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+. ........||++||+||.+...+|++++||||+||++|||+.-+.||.+.
T Consensus 179 ~s~-~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~ 231 (375)
T KOG0591|consen 179 SSK-TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD 231 (375)
T ss_pred cch-hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc
Confidence 763 33445678999999999999999999999999999999999999999753
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-37 Score=310.24 Aligned_cols=199 Identities=30% Similarity=0.413 Sum_probs=178.9
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC-eeEEEEe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE-EKLLVYE 737 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e 737 (885)
.+.+..+.||+|..|.||+++++ +++.+|+|++.... +...+++.+|+++++..+||+|+.+|+.|..+. .+.++||
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 34667889999999999999976 48889999995433 345678999999999999999999999999888 5999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
||++|||++++... +.+++.....++.+++++|.|||. +++|+||||||+||++...|+|||+|||.+......
T Consensus 159 YMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--- 232 (364)
T KOG0581|consen 159 YMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--- 232 (364)
T ss_pred hcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh---
Confidence 99999999999854 559999999999999999999994 389999999999999999999999999998876543
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......||..|||||.+.+..|+.++||||||+.++|+.+|++||.+.
T Consensus 233 ~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~ 280 (364)
T KOG0581|consen 233 IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP 280 (364)
T ss_pred hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc
Confidence 556678999999999999999999999999999999999999999875
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=363.00 Aligned_cols=483 Identities=28% Similarity=0.354 Sum_probs=289.3
Q ss_pred EEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCC
Q 047790 70 VIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFT 149 (885)
Q Consensus 70 ~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 149 (885)
|.++..+. .||..+..-..++.|+++.|.+....-+.+.+.-+|+.||+++|+++ ..|..+..+.+|+.|+++.|.|.
T Consensus 4 d~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~ 81 (1081)
T KOG0618|consen 4 DASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR 81 (1081)
T ss_pred ccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh
Confidence 44444443 46666777777888888888775444445555666888888888887 77888888888888888888888
Q ss_pred CCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccc
Q 047790 150 GEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI 229 (885)
Q Consensus 150 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 229 (885)
..|.+.+++.+|++|.|.+|++. ..|..+..+.+|++|+++.|++. .+|.- +..++.++.+..++|.-....+
T Consensus 82 -~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~-i~~lt~~~~~~~s~N~~~~~lg--- 154 (1081)
T KOG0618|consen 82 -SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLV-IEVLTAEEELAASNNEKIQRLG--- 154 (1081)
T ss_pred -hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchh-HHhhhHHHHHhhhcchhhhhhc---
Confidence 77788888888888888888887 78888888888888888888886 77765 6677888888888882221111
Q ss_pred cCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCccccccccc
Q 047790 230 GNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRC 309 (885)
Q Consensus 230 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 309 (885)
... .+.+++..|.. .+.++..+..+.. .|+|++|.+. -..+..+.+|+.|....|+++...- .-
T Consensus 155 -~~~-ik~~~l~~n~l-----~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~~----~g 218 (1081)
T KOG0618|consen 155 -QTS-IKKLDLRLNVL-----GGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELEI----SG 218 (1081)
T ss_pred -ccc-chhhhhhhhhc-----ccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEEe----cC
Confidence 111 44444433332 2334444444444 5777777776 2345566777777777777765432 23
Q ss_pred CCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEcc
Q 047790 310 TNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLS 389 (885)
Q Consensus 310 ~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 389 (885)
++|+.|+.++|.++ ..-..+....++.+|+++|++++.. .++..+.+|+.++..+|++ ..+|..+....+|+.|+..
T Consensus 219 ~~l~~L~a~~n~l~-~~~~~p~p~nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l-~~lp~ri~~~~~L~~l~~~ 295 (1081)
T KOG0618|consen 219 PSLTALYADHNPLT-TLDVHPVPLNLQYLDISHNNLSNLP-EWIGACANLEALNANHNRL-VALPLRISRITSLVSLSAA 295 (1081)
T ss_pred cchheeeeccCcce-eeccccccccceeeecchhhhhcch-HHHHhcccceEecccchhH-HhhHHHHhhhhhHHHHHhh
Confidence 66777777777776 2222333335777777777777543 7777777777777777777 3555566666677777777
Q ss_pred CCcccccCcccccccccccceecccccccCcCCCccCCCC-cccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccC
Q 047790 390 SNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCI-SLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRL 468 (885)
Q Consensus 390 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l 468 (885)
.|.+. .+|.....++.|++|+|..|+|....+..+..+. +|+.|+.+.|++...+.. .=...
T Consensus 296 ~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~----------------~e~~~ 358 (1081)
T KOG0618|consen 296 YNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSY----------------EENNH 358 (1081)
T ss_pred hhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccc----------------cchhh
Confidence 77776 4555666677777777777777643332333332 256666666666432211 00122
Q ss_pred CCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCc
Q 047790 469 TNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGI 548 (885)
Q Consensus 469 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 548 (885)
..|+.|++.+|.++...-+.+.+..+|+.|+|++|+|. ++| ...+.++..|++|+||||+|+
T Consensus 359 ~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fp---------------as~~~kle~LeeL~LSGNkL~-- 420 (1081)
T KOG0618|consen 359 AALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFP---------------ASKLRKLEELEELNLSGNKLT-- 420 (1081)
T ss_pred HHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCC---------------HHHHhchHHhHHHhcccchhh--
Confidence 33555555555555444444555555555555555554 111 123444555555555544444
Q ss_pred eeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCC-CCCCCccccccccccccCC
Q 047790 549 VGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEG-EVPRSGICQNLSIISLTGN 627 (885)
Q Consensus 549 ~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~-~~p~~~~~~~~~~~~~~~N 627 (885)
.+|.++.+++.|++|...+|+|. ..| ++.++++|+.+|+|.|+|+. .+|......+++.+|++||
T Consensus 421 ------------~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN 486 (1081)
T KOG0618|consen 421 ------------TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGN 486 (1081)
T ss_pred ------------hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCC
Confidence 34444444444444444444444 334 44444444444444444443 2222222234444444444
Q ss_pred cc
Q 047790 628 KD 629 (885)
Q Consensus 628 ~~ 629 (885)
+|
T Consensus 487 ~~ 488 (1081)
T KOG0618|consen 487 TR 488 (1081)
T ss_pred cc
Confidence 43
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=342.00 Aligned_cols=286 Identities=27% Similarity=0.342 Sum_probs=215.5
Q ss_pred ccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCC
Q 047790 253 RITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISE 332 (885)
Q Consensus 253 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 332 (885)
.||+.+..+..|+.||||+|+++ +.|..+...+++-.|+||+|+|..++...|-+++.|-.||||+|++...+|..-..
T Consensus 94 GiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL 172 (1255)
T KOG0444|consen 94 GIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRL 172 (1255)
T ss_pred CCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHHHHHH
Confidence 46777777778888888888888 77888888888888888888888888888888888888888888887544443332
Q ss_pred CCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcc-cccCccccccccccccee
Q 047790 333 LPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNML-TRQIPKKIGNLTNIQILK 411 (885)
Q Consensus 333 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~ 411 (885)
..|++|+|++|.+... .-..+..+++|++|.+++.+= ..-+|.++..+.+|..+|
T Consensus 173 ~~LqtL~Ls~NPL~hf------------------------QLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvD 228 (1255)
T KOG0444|consen 173 SMLQTLKLSNNPLNHF------------------------QLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVD 228 (1255)
T ss_pred hhhhhhhcCCChhhHH------------------------HHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhcc
Confidence 3566666666655422 112234456677777777552 235788888888888888
Q ss_pred cccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCccc
Q 047790 412 LNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGD 491 (885)
Q Consensus 412 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 491 (885)
||.|.+. ++|+.+.++.+|+.|+||+|+|+ .+........+|++|+||.|+++ .+|+++.+
T Consensus 229 lS~N~Lp-~vPecly~l~~LrrLNLS~N~it-----------------eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcK 289 (1255)
T KOG0444|consen 229 LSENNLP-IVPECLYKLRNLRRLNLSGNKIT-----------------ELNMTEGEWENLETLNLSRNQLT-VLPDAVCK 289 (1255)
T ss_pred ccccCCC-cchHHHhhhhhhheeccCcCcee-----------------eeeccHHHHhhhhhhccccchhc-cchHHHhh
Confidence 8888887 78888888888888888888886 44455666778888888888888 78888888
Q ss_pred ccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccc
Q 047790 492 SLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQ 571 (885)
Q Consensus 492 l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~ 571 (885)
+++|+.|++.+|+++- ..+|..|+.|.+|+.+..++|.|+ -+|+.++.+.+
T Consensus 290 L~kL~kLy~n~NkL~F---------------eGiPSGIGKL~~Levf~aanN~LE--------------lVPEglcRC~k 340 (1255)
T KOG0444|consen 290 LTKLTKLYANNNKLTF---------------EGIPSGIGKLIQLEVFHAANNKLE--------------LVPEGLCRCVK 340 (1255)
T ss_pred hHHHHHHHhccCcccc---------------cCCccchhhhhhhHHHHhhccccc--------------cCchhhhhhHH
Confidence 8888888888888871 235788888888888888877665 67888888888
Q ss_pred ccccccccccCCCCCCccccCccccceeecccCcCCCCCCC
Q 047790 572 LEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPR 612 (885)
Q Consensus 572 L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~ 612 (885)
|+.|.|++|+|- .+|+.+.-|+.|++||+..|+=--.||.
T Consensus 341 L~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 341 LQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred HHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCC
Confidence 888888888887 6888888888888888888864444443
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=318.63 Aligned_cols=219 Identities=23% Similarity=0.282 Sum_probs=190.6
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||.|+-++ |..+|+|++++.. ....++...|-.+|....+|+|+++|-.|.+.++.||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 45789999999999999999998665 9999999998754 3345678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC-
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD- 813 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~- 813 (885)
||||++||++..++.+. +.+++..++.++.+.+-|+..+| +.||+||||||+|+++|..|++||+|||++.-+..
T Consensus 219 iMEylPGGD~mTLL~~~-~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRK-DTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEecCCccHHHHHHhc-CcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 99999999999999854 45999999999999999999999 99999999999999999999999999999743210
Q ss_pred ---------------------CC-C-----------------------CcccCCCCCCccCCcccccCCCCCCcchhHHH
Q 047790 814 ---------------------CE-S-----------------------HVSTDTADTIGYVPSEYGQAGRANERGDIYSF 848 (885)
Q Consensus 814 ---------------------~~-~-----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvwsl 848 (885)
.+ . .......||+.|+|||++.+.+|+..+|.||+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 00 0 00112348999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHH
Q 047790 849 GVILLELVTGKQPTGPEFEDKDGGNLVDWVLLM 881 (885)
Q Consensus 849 Gvvl~elltg~~P~~~~~~~~~~~~l~~~~~~~ 881 (885)
|||||||+.|++||....+.+.-++|+.|...+
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l 407 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETL 407 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhc
Confidence 999999999999999988888888888887544
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=317.65 Aligned_cols=204 Identities=26% Similarity=0.357 Sum_probs=179.9
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|.|++.||+|+|+.||+|+..+ ++.||+|++.+.. ....+....|-.+|.+| .||.|+++|..|.++...|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 35789999999999999999998654 8999999997643 22234577888999999 6999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+|+||+++|+|.+++.+. +.+++.-.+.++.+|+.|++||| +.|||||||||+||+++++|+++|+|||.|+.+.+
T Consensus 151 FvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 999999999999999966 45999999999999999999999 99999999999999999999999999999988754
Q ss_pred CCCC----------cc--cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 814 CESH----------VS--TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 814 ~~~~----------~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.... .+ ....||..|.+||++.....++++|+|+|||++|+|+.|.+||....
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N 291 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN 291 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc
Confidence 2211 11 34679999999999999999999999999999999999999998643
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=295.10 Aligned_cols=199 Identities=27% Similarity=0.321 Sum_probs=176.1
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.|+...++|+|+||+||++++++ |+.||+|++..... ...+-..+|++++++++|||++.++++|......++||||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 47788899999999999999876 88999999976542 2345578999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
| ..++.+-++....+.+...+..+++|++.|++|+| +.+++||||||+||+++..|.+|+||||+|+....+ ...
T Consensus 83 ~-dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p-gd~ 157 (396)
T KOG0593|consen 83 C-DHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP-GDN 157 (396)
T ss_pred c-chHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCC-cch
Confidence 9 45777778877778999999999999999999999 999999999999999999999999999999988742 233
Q ss_pred ccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+....|.+|.|||.+-+ .+|..+.||||+||++.||++|.+.|-+.
T Consensus 158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~ 205 (396)
T KOG0593|consen 158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR 205 (396)
T ss_pred hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc
Confidence 345678999999998887 78999999999999999999999887654
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=312.65 Aligned_cols=202 Identities=26% Similarity=0.317 Sum_probs=179.5
Q ss_pred eEEeecceecccCCceEEEEEe-CCCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~lv 735 (885)
..|+..++||+|+||.||+|++ .+|+.||+|++.-.. .....-..+||.|++++.||||+++.+..... +.+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 4588899999999999999986 459999999987543 34455678999999999999999999988765 689999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
+||| ..+|.-++...+-.+++.++..++.|++++++||| .+||.|||||..||++|++|.+||+|||+|+.+....
T Consensus 197 FeYM-dhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 197 FEYM-DHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred Eecc-cchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 9999 55999999887778999999999999999999999 9999999999999999999999999999999887765
Q ss_pred CCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
....+...-|.+|.|||.+.|. .|+.+.|+||.|||+.||++|++.|.+..
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t 324 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT 324 (560)
T ss_pred CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc
Confidence 5555666789999999988875 69999999999999999999999987654
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=317.42 Aligned_cols=223 Identities=49% Similarity=0.847 Sum_probs=190.7
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC-eeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE-EKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e~~ 739 (885)
..|.-.++||+|+||.||+|...+++.||||++.....+...+|.+|++++.+++|||++++++||.+.+ +.++|+||+
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym 154 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYM 154 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEcc
Confidence 3466678999999999999999999999999887655431456999999999999999999999999888 599999999
Q ss_pred cCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNRAA-SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~~~-~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+.|+|.+.+..+.. .++|..+.+||.++|+|++|||..+...|+||||||.||++|++.++|++|||+|+.........
T Consensus 155 ~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~ 234 (361)
T KOG1187|consen 155 PNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSV 234 (361)
T ss_pred CCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccce
Confidence 99999999987665 78999999999999999999998777789999999999999999999999999996543211111
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHHhc
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMKK 884 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~~~~~~l~~~~~~~~~~ 884 (885)
.....||.+|+|||+......+.++|||||||++.|++||+.|.+... ......+++|+..++++
T Consensus 235 ~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~-~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 235 STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSR-PRGELSLVEWAKPLLEE 299 (361)
T ss_pred eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCC-CcccccHHHHHHHHHHC
Confidence 111179999999999999999999999999999999999998877543 33444599999877764
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=335.82 Aligned_cols=360 Identities=31% Similarity=0.423 Sum_probs=222.2
Q ss_pred EEEEEEecccccc-cccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee
Q 047790 66 VVSLVIQTQSLKG-PVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144 (885)
Q Consensus 66 v~~l~l~~~~l~g-~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 144 (885)
|..+|+++++++| ..|.....+++++.|.|...++. .+|.+++.|.+|++|.+++|++. .+-.++..|+.|+.+++.
T Consensus 9 VrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R 86 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVR 86 (1255)
T ss_pred eecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhh
Confidence 4556666666663 45556666666666666666663 56666666666666666666666 455556666666666666
Q ss_pred ccCCC-CCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcc
Q 047790 145 SNSFT-GEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSG 223 (885)
Q Consensus 145 ~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 223 (885)
.|++. .-+|..+..+..|..||||+|+++ ..|..+....++-.|+||+|+|. +||...|-+++.|-+||||+|++.
T Consensus 87 ~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe- 163 (1255)
T KOG0444|consen 87 DNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE- 163 (1255)
T ss_pred ccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-
Confidence 66664 235556666666666666666666 56666666666666666666665 666666666666666666666664
Q ss_pred cCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCccc
Q 047790 224 NIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE 303 (885)
Q Consensus 224 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 303 (885)
. +|+.+..+..|+.|+|++|.+....-..+-
T Consensus 164 ~-----------------------------LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLP-------------------- 194 (1255)
T KOG0444|consen 164 M-----------------------------LPPQIRRLSMLQTLKLSNNPLNHFQLRQLP-------------------- 194 (1255)
T ss_pred h-----------------------------cCHHHHHHhhhhhhhcCCChhhHHHHhcCc--------------------
Confidence 2 333344444444445555444322222222
Q ss_pred ccccccCCcceeeccccccC-CCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccc
Q 047790 304 DVFDRCTNLSELVLVNNRIS-GSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAV 381 (885)
Q Consensus 304 ~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 381 (885)
.+++|+.|.+++.+-+ ..+|..+..+ +|..+|+|.|++. ..|+.+.++++|+.|+|++|+|+.. ........
T Consensus 195 ----smtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL-~~~~~~W~ 268 (1255)
T KOG0444|consen 195 ----SMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITEL-NMTEGEWE 268 (1255)
T ss_pred ----cchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeee-eccHHHHh
Confidence 2333444444433221 2333333333 3444555555554 5566666666666666666666532 22344556
Q ss_pred cccEEEccCCcccccCcccccccccccceeccccccc-CcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCC
Q 047790 382 ALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFD-GIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGK 460 (885)
Q Consensus 382 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~ 460 (885)
+|++|+||.|+++ .+|.++..+++|+.|++.+|+++ .-+|..++++.+|+.+..++|++. .
T Consensus 269 ~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-----------------l 330 (1255)
T KOG0444|consen 269 NLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-----------------L 330 (1255)
T ss_pred hhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-----------------c
Confidence 7778888888876 67777777888888888777765 126777777777777777777775 6
Q ss_pred CchhcccCCCCCEEeccCccccCCCCCCcccccccceeeecccc
Q 047790 461 IPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQ 504 (885)
Q Consensus 461 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 504 (885)
+|+.++.+..|+.|.|+.|++- ++|+.+.-++.|+.||+..|.
T Consensus 331 VPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 331 VPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred CchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 7777777777777777777776 677777777777777777774
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=283.40 Aligned_cols=199 Identities=22% Similarity=0.317 Sum_probs=176.1
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.+|...+++|+|.||.||+|++. .|+.||+|+++.... .......+|++.++.++|+||+.++++|.+.+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 46888999999999999999864 599999999975432 234568899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|++ .+|+.+++.....++..++..++.+++++++||| +..|.|||+||+|++++.+|.+|++|||+|+.+.++...
T Consensus 82 fm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred ecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 995 5999999988888999999999999999999999 999999999999999999999999999999998875433
Q ss_pred cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. ....|.+|.|||.+.| +.|+...||||.||+++|++-|.+-|.+
T Consensus 158 ~~-~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG 204 (318)
T KOG0659|consen 158 QT-HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG 204 (318)
T ss_pred cc-cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC
Confidence 33 3368899999998777 5789999999999999999998755443
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=313.20 Aligned_cols=201 Identities=35% Similarity=0.509 Sum_probs=176.7
Q ss_pred EEeecceecccCCceEEEEEeCCCCeEEEEEeccccccc--HHHHHHHHHHhcccCCCCccceeeeeEeCC-eeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQC--DREFAAEMETLDMVKHQNLVQLLGYCSVGE-EKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e~ 738 (885)
...+.+.+|+|+||.||+|.+.....||+|++....... .+.|.+|+.++.+++||||+++++++.... ..++||||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 355677799999999999999887779999997654322 458999999999999999999999998877 78999999
Q ss_pred ccCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCC-ceecCCCCCcEEEcCCC-cEEEeeccCcccccCCC
Q 047790 739 MVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPY-IIHMDIKTSNILLNDYF-EAKVSDFGLARLISDCE 815 (885)
Q Consensus 739 ~~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~-i~H~dlkp~Nil~~~~~-~vkl~Dfg~a~~~~~~~ 815 (885)
+++|+|.+++.. +...+++..+..++.+++.|+.||| +.+ |||||+||+||+++.++ ++||+|||+++......
T Consensus 122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 999999999987 4677999999999999999999999 888 99999999999999997 99999999998765422
Q ss_pred CCcccCCCCCCccCCccccc--CCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQ--AGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.......||..|||||++. ...|+.++||||||+++|||+||+.||....
T Consensus 199 -~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~ 250 (362)
T KOG0192|consen 199 -TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLA 250 (362)
T ss_pred -ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCC
Confidence 2222368999999999999 6699999999999999999999999997543
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=310.31 Aligned_cols=197 Identities=29% Similarity=0.403 Sum_probs=178.3
Q ss_pred eEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.+|.+-+.||+|.||.||+|+.++ .+.||+|.+.+.... +.+.+.+|++|++.++||||+.++++|+...+.|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 368888999999999999998765 778999999765533 34568899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+.| +|..+++.. +.++++.++.++.++..|+.||| +.+|.|||+||.||++++.+.+|++|||+|+.++. ...
T Consensus 82 ~a~g-~L~~il~~d-~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~t~ 155 (808)
T KOG0597|consen 82 YAVG-DLFTILEQD-GKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST-NTS 155 (808)
T ss_pred hhhh-hHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhccc-Cce
Confidence 9977 999999854 45999999999999999999999 99999999999999999999999999999998876 344
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
+-....||+.|||||+..++.|+..+|+||+||++||+++|++||.
T Consensus 156 vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~ 201 (808)
T KOG0597|consen 156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFY 201 (808)
T ss_pred eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCch
Confidence 4556679999999999999999999999999999999999999984
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=310.73 Aligned_cols=202 Identities=25% Similarity=0.378 Sum_probs=179.6
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc----c-ccHHHHHHHHHHhcccC-CCCccceeeeeEeCC
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT----G-QCDREFAAEMETLDMVK-HQNLVQLLGYCSVGE 730 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~----~-~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~ 730 (885)
...+.|.+++.||+|+||.|+.|.+. .+..||+|++.+.. . ...+.+.+|+.+++.++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 45678999999999999999999764 58999999776641 1 23456778999999999 999999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC-CcEEEeeccCcc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY-FEAKVSDFGLAR 809 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~-~~vkl~Dfg~a~ 809 (885)
.+++||||+.||+|.+++.. .+++.+..+++++.|++.|++||| ++||+||||||+||+++.+ +++||+|||++.
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 99999999999999999997 566899999999999999999999 9999999999999999998 999999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCCC-CC-CcchhHHHHHHHHHHHhCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAGR-AN-ERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~-~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... .........+|++.|+|||++.+.. |+ .++||||+||++|.|++|+.||..
T Consensus 170 ~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d 225 (370)
T KOG0583|consen 170 ISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD 225 (370)
T ss_pred ccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence 764 2334455678999999999999987 85 789999999999999999999975
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=344.37 Aligned_cols=478 Identities=28% Similarity=0.344 Sum_probs=292.6
Q ss_pred EEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeec
Q 047790 66 VVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145 (885)
Q Consensus 66 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 145 (885)
++.++++.+.+...--+++..--+|+.|||++|.+. ..|..+..+.+|+.|+++.|.|. ..|.+..++.+|++|.|..
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~ 100 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKN 100 (1081)
T ss_pred HHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheecc
Confidence 455555555443211233333444888888888774 67778888888888888888887 6778888888888888888
Q ss_pred cCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccC
Q 047790 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNI 225 (885)
Q Consensus 146 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~ 225 (885)
|.+. ..|..+..+++|++|++|.|++. .+|..+..++.+..+..++|.....++. . ..+.+++..|.+.+.+
T Consensus 101 n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~-----~-~ik~~~l~~n~l~~~~ 172 (1081)
T KOG0618|consen 101 NRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQ-----T-SIKKLDLRLNVLGGSF 172 (1081)
T ss_pred chhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhcc-----c-cchhhhhhhhhcccch
Confidence 8887 77888888888888888888887 7777788888888888888832213322 2 2777777777777777
Q ss_pred CccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCccccc
Q 047790 226 PPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDV 305 (885)
Q Consensus 226 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 305 (885)
+..+.+++. .|+|.+|... ...+..+.+|+.|....|++.... -..++++.|+.++|.++...+.
T Consensus 173 ~~~i~~l~~--~ldLr~N~~~--------~~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~- 237 (1081)
T KOG0618|consen 173 LIDIYNLTH--QLDLRYNEME--------VLDLSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVH- 237 (1081)
T ss_pred hcchhhhhe--eeecccchhh--------hhhhhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeeccc-
Confidence 777777766 6677555422 123556677777777777776321 2245677777777777633322
Q ss_pred ccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCccccccccccc
Q 047790 306 FDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE 384 (885)
Q Consensus 306 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 384 (885)
....+|+++++++|++++ +|+++... .++.++..+|+++ .+|..+...++|+.|.+.+|.++.+ |.....++.|+
T Consensus 238 -p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yi-p~~le~~~sL~ 313 (1081)
T KOG0618|consen 238 -PVPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYI-PPFLEGLKSLR 313 (1081)
T ss_pred -cccccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhC-CCcccccceee
Confidence 233567777777777774 34666666 6777777777774 5666677777777777777777643 33456677777
Q ss_pred EEEccCCcccccCccccccccc-ccceecccccccCcCCCccCCCCcccEEEcCCcccCcce--------eEEEEeecCC
Q 047790 385 KLDLSSNMLTRQIPKKIGNLTN-IQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCV--------VVVYLLLNNN 455 (885)
Q Consensus 385 ~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--------~~~~l~l~~n 455 (885)
+|+|..|+|....+..+..+.. |..|+.+.|++....-..=...+.|+.|++.+|.++... .+..|+|++|
T Consensus 314 tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyN 393 (1081)
T KOG0618|consen 314 TLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYN 393 (1081)
T ss_pred eeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccc
Confidence 7777777776443333333333 666666777766433222233455666666666664211 1122333333
Q ss_pred cccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccC
Q 047790 456 MLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGL 535 (885)
Q Consensus 456 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L 535 (885)
++.......+.++..|+.|+||+|+++ .+|+++.++..|+.|...+|++. ..| .+..+++|
T Consensus 394 rL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-----------------~fP-e~~~l~qL 454 (1081)
T KOG0618|consen 394 RLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-----------------SFP-ELAQLPQL 454 (1081)
T ss_pred ccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-----------------ech-hhhhcCcc
Confidence 333222233455566666666666665 45555666666666666666655 335 56666666
Q ss_pred cEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccC
Q 047790 536 THLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADN 604 (885)
Q Consensus 536 ~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N 604 (885)
+.+|+|+|+|+.+ .+|..... ++|++|||++|.-...--..+..+.++...++.-|
T Consensus 455 ~~lDlS~N~L~~~------------~l~~~~p~-p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 455 KVLDLSCNNLSEV------------TLPEALPS-PNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred eEEecccchhhhh------------hhhhhCCC-cccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 6666666666522 23333222 56666666666522122223333444444444433
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=305.49 Aligned_cols=204 Identities=22% Similarity=0.299 Sum_probs=179.2
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccC-CCCccceeeeeEeCC-eeE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGE-EKL 733 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~-~~~ 733 (885)
.+-.+|.+.++||.|+||.||+|+.. .++.||+|++++.- ..++..-.+|++.+++++ ||||+++.+++.+.+ ..|
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 34568999999999999999999864 58899999997543 344455668999999999 999999999998877 899
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||| ..+|.+.++.+.+.+++.+++.|+.||+++|+|+| +.|+.|||+||+||++.....+||+|||+|+.+.+
T Consensus 87 fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 87 FVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEeccccccccccc
Confidence 999999 56999999999888999999999999999999999 99999999999999999888999999999998875
Q ss_pred CCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
.. ..+....|.+|.|||++... .|+.+.|+||+|||++|+.+-++.|-+..+
T Consensus 163 kp--PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE 215 (538)
T KOG0661|consen 163 KP--PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE 215 (538)
T ss_pred CC--CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH
Confidence 33 33456789999999987765 579999999999999999999988866544
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=306.79 Aligned_cols=199 Identities=33% Similarity=0.523 Sum_probs=177.4
Q ss_pred EeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCC
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
+.+.+.||+|-||.||.|.+.....||+|.++.. .....+|.+|+++|++++|++|+++++++..++.+|+||||++.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 4567899999999999999998889999998764 344678889999999999999999999999988999999999999
Q ss_pred CHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 743 SLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 743 sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
+|.++++. .+..+...+...++.|||++++||+ ++++||||+.++||+|+++..|||+|||+|+.+.++.......
T Consensus 287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~ 363 (468)
T KOG0197|consen 287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG 363 (468)
T ss_pred cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCC
Confidence 99999996 5566899999999999999999999 9999999999999999999999999999999666544334444
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
......|.|||.+....++.++|||||||+|||+.| |+.||.+.
T Consensus 364 ~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m 408 (468)
T KOG0197|consen 364 GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM 408 (468)
T ss_pred CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC
Confidence 445678999999999999999999999999999999 88887544
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=291.38 Aligned_cols=201 Identities=22% Similarity=0.333 Sum_probs=181.9
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.-++|++.++||+|.||.|-+|.. ..|+.||+|.+++.... +..++.+|++||..++||||+.+|++|+..+.+++
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 346799999999999999999975 56999999999876533 34578899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||..+|.|.+++..++ .+++..+++++.||.+|+.|+| +.+++|||+|-+||++|.++++||+|||++-.+...
T Consensus 131 vMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 131 VMEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK 206 (668)
T ss_pred EEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhccc
Confidence 999999999999998665 4999999999999999999999 999999999999999999999999999999888752
Q ss_pred CCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..-..++|.+-|++||++.+.+| .+..|-||+||++|-++.|..||++.
T Consensus 207 --kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~ 256 (668)
T KOG0611|consen 207 --KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR 256 (668)
T ss_pred --cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc
Confidence 33345789999999999999988 57899999999999999999999764
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=285.74 Aligned_cols=209 Identities=24% Similarity=0.283 Sum_probs=180.6
Q ss_pred eeceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEe--
Q 047790 654 VGSVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSV-- 728 (885)
Q Consensus 654 ~g~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-- 728 (885)
.+++-.+..|+...+|++|+||.||+|+++ +++.||+|+++-... ...--..+|+.++.+++||||+.+-++.+.
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~ 148 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN 148 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc
Confidence 455555667999999999999999999875 488899999975442 223346789999999999999999998764
Q ss_pred CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 729 GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 729 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
-+.+|+||||++ .+|.++++...+++...++..+..|++.|++||| ...|+|||+||+|+++...|.+||+|||+|
T Consensus 149 ~d~iy~VMe~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLA 224 (419)
T KOG0663|consen 149 MDKIYIVMEYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLA 224 (419)
T ss_pred cceeeeeHHHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchh
Confidence 357999999995 5999999988888999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
+.++++.+.. +...-|.+|.|||.+.+. .|+++.|+||+|||+.|++++++.|.+..+
T Consensus 225 R~ygsp~k~~-T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE 283 (419)
T KOG0663|consen 225 REYGSPLKPY-TPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE 283 (419)
T ss_pred hhhcCCcccC-cceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch
Confidence 9998764433 345689999999988775 689999999999999999999998876543
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=301.98 Aligned_cols=199 Identities=24% Similarity=0.352 Sum_probs=178.9
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.++.|++++.||.|+.|.|-.|++. .|+.+|||++.++. ......+++|+-+|+-++||||+++|++++++.+.|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 4567999999999999999999875 59999999998763 2234679999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|.||++||.|.+++-.++ ++.+..+.+++.||..|+.||| ..+|||||+||+|+++|..+++||+|||.|..-.+
T Consensus 90 vlEyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~- 164 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP- 164 (786)
T ss_pred EEEecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccC-
Confidence 999999999999998655 4888999999999999999999 89999999999999999999999999999987543
Q ss_pred CCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~ 863 (885)
.+.-...+|.+.|+|||++.|.+| +.++||||.|||+|.++||+.||+
T Consensus 165 -gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd 213 (786)
T KOG0588|consen 165 -GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD 213 (786)
T ss_pred -CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC
Confidence 233345689999999999999998 588999999999999999999996
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=300.55 Aligned_cols=197 Identities=28% Similarity=0.384 Sum_probs=178.7
Q ss_pred EEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 662 IIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.|.--++||+|+.|.||.|.. ..++.||+|.+........+-+.+|+.+|+..+|+||+.+++.|..++..|+||||++
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 478889999999999999975 4588899999987766666778899999999999999999999988899999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
||+|.+++.... +++.++..|+.++++||+||| .+||+|||||.+||+++.+|.+||+|||++..+..... ...
T Consensus 354 ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-KR~ 427 (550)
T KOG0578|consen 354 GGSLTDVVTKTR--MTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-KRS 427 (550)
T ss_pred CCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccC-ccc
Confidence 999999997543 899999999999999999999 99999999999999999999999999999888765433 334
Q ss_pred CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 821 DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
...||++|||||+.....|+++.||||||++++||+.|.+||-.
T Consensus 428 TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln 471 (550)
T KOG0578|consen 428 TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN 471 (550)
T ss_pred cccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC
Confidence 46799999999999999999999999999999999999999863
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=284.73 Aligned_cols=211 Identities=20% Similarity=0.230 Sum_probs=181.5
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
.+-...|++.++||+|+-|.||.|+..+ +..+|+|++.++.- ....+...|.+||+.+.||.++.+|+.|+.+++.
T Consensus 73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~ 152 (459)
T KOG0610|consen 73 SLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYS 152 (459)
T ss_pred ccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecccee
Confidence 3445678999999999999999998766 68899999987642 2345788899999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 733 LLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
|++||||+||+|....+++ ++.+++..++.++..++-||+||| ..|||+||+||+||++.++|++.++||.++...
T Consensus 153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 9999999999999998864 455999999999999999999999 999999999999999999999999999986432
Q ss_pred cC---------------------------------C-C---------------------CCcccCCCCCCccCCcccccC
Q 047790 812 SD---------------------------------C-E---------------------SHVSTDTADTIGYVPSEYGQA 836 (885)
Q Consensus 812 ~~---------------------------------~-~---------------------~~~~~~~~~~~~y~aPE~~~~ 836 (885)
.. . + ...+....||-+|+|||++.+
T Consensus 230 ~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G 309 (459)
T KOG0610|consen 230 PVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG 309 (459)
T ss_pred CCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec
Confidence 10 0 0 011122347889999999999
Q ss_pred CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC
Q 047790 837 GRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870 (885)
Q Consensus 837 ~~~~~~~DvwslGvvl~elltg~~P~~~~~~~~~ 870 (885)
.+.+.+.|.|+|||++|||+.|+-||.+...++.
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T 343 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET 343 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh
Confidence 9999999999999999999999999998766655
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=304.50 Aligned_cols=207 Identities=22% Similarity=0.324 Sum_probs=180.5
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccC-CCCccceeeeeEeCCe
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEE 731 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~ 731 (885)
.+....|.+.++||+|.||+|+.|..+. ++.+|||.+++.. ..+.+....|.+|+.... ||+++.++..|...++
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 4456779999999999999999998764 7789999998765 234567888999988776 9999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.|.||||+.||++..++ +...+++..++.+|..++.||+||| +.||+|||+|-+||++|.+|++||+|||+++.-
T Consensus 444 l~fvmey~~Ggdm~~~~--~~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHI--HTDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEEEecCCCcEEEEE--ecccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEeccccccccc
Confidence 99999999999944433 3355999999999999999999999 999999999999999999999999999999864
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~~ 869 (885)
-.. .....+.+||+.|+|||++.+..|+.+.|.|||||+||||+.|..||.+..+++
T Consensus 519 m~~-g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee 575 (694)
T KOG0694|consen 519 MGQ-GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE 575 (694)
T ss_pred CCC-CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence 322 234556899999999999999999999999999999999999999998765544
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=291.39 Aligned_cols=202 Identities=29% Similarity=0.435 Sum_probs=173.8
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC--eeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE--EKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~ 736 (885)
...|...+.||+|+||.||.+...+ |...|+|.+........+.+.+|++++++++||+|+++++...... .+++.|
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 3457889999999999999998765 8899999987653223567899999999999999999999754444 688999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-CCcEEEeeccCcccccC--
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-YFEAKVSDFGLARLISD-- 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-~~~vkl~Dfg~a~~~~~-- 813 (885)
||+++|+|.+++.+.+..+++..++.+..|++++++|+| ++||+||||||+||+++. ++.+||+|||.+.....
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 999999999999976657999999999999999999999 999999999999999999 79999999999887653
Q ss_pred CCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..........||+.|||||++..+ ...+++||||+||++.||+||+.||..
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence 122233456799999999999963 344699999999999999999999975
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=280.82 Aligned_cols=204 Identities=24% Similarity=0.340 Sum_probs=177.2
Q ss_pred eeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
.....|++.+.||.|..+.||+|+. +.+..||||++.-+.- .+.+.+.+|++.++.++||||++++..|..+...|+|
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 3456799999999999999999975 4589999999975442 3357899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 736 YEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|+||.+||+.+++.. ....+++..+..+.+++++||.||| ++|.+|||||+.||+++.+|.|||+|||.+..+.+.
T Consensus 103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 999999999999985 3344999999999999999999999 999999999999999999999999999976555332
Q ss_pred CCC---cccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESH---VSTDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... .+....+|++|||||++.. .+|+.|+||||||++..|+.+|..||..
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k 234 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSK 234 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCccc
Confidence 211 1245579999999998443 5799999999999999999999999974
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=304.33 Aligned_cols=201 Identities=24% Similarity=0.252 Sum_probs=174.0
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+|++.+.||+|+||.||+|+.. +++.||+|++.+.. ......+.+|+++++.++||+|+++++.+.+....|+|||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 5889999999999999999865 48899999987543 1223567889999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC-
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES- 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~- 816 (885)
|+++|+|.+++... ..+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 82 FLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence 99999999999754 45899999999999999999999 99999999999999999999999999999875432110
Q ss_pred ---------------------------------CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 817 ---------------------------------HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 817 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 00123468999999999999999999999999999999999999997
Q ss_pred CCC
Q 047790 864 PEF 866 (885)
Q Consensus 864 ~~~ 866 (885)
...
T Consensus 238 ~~~ 240 (363)
T cd05628 238 SET 240 (363)
T ss_pred CCC
Confidence 543
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=265.49 Aligned_cols=206 Identities=24% Similarity=0.370 Sum_probs=182.3
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
..+.+.+|++++.||+|-||.||.|+.+ .+-.||+|++.+.. .+...++.+|++|-..++||||+++|++|.+...
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~r 96 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKR 96 (281)
T ss_pred cccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccce
Confidence 3456788999999999999999999865 47789999987643 3445789999999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 732 KLLVYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.|+++||..+|++...++. +...+++.....+..|++.|+.|+| .++|+||||||+|++++..+.+|++|||-+..
T Consensus 97 iyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~ 173 (281)
T KOG0580|consen 97 IYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVH 173 (281)
T ss_pred eEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence 9999999999999999884 3345899999999999999999999 99999999999999999999999999999876
Q ss_pred ccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
... ......+||..|.|||...+..++...|+|++|++.||++.|.+||.....
T Consensus 174 ~p~---~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~ 227 (281)
T KOG0580|consen 174 APS---NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH 227 (281)
T ss_pred cCC---CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh
Confidence 542 233456899999999999999999999999999999999999999976543
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.6e-33 Score=282.64 Aligned_cols=195 Identities=26% Similarity=0.349 Sum_probs=164.6
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC-----eeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE-----EKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-----~~~l 734 (885)
-.|+-.+++|+|.||.||+|... .++.||+|+.-+.. +.-.+|.++|+.+.||||+++.-+|.... +..+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 35888999999999999999754 47899999986543 23347999999999999999998875432 2348
Q ss_pred EEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC-CcEEEeeccCccc
Q 047790 735 VYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY-FEAKVSDFGLARL 810 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~-~~vkl~Dfg~a~~ 810 (885)
||||++. +|.++++. ....++.-.++-+.+|+++|++||| +.|||||||||.|+++|.+ |.+||+|||.|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999955 99999884 2455888899999999999999999 8999999999999999955 8999999999998
Q ss_pred ccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....... .....+.+|.|||.+.+. .|+.+.||||.|||++||+-|++.|.+.
T Consensus 176 L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~ 229 (364)
T KOG0658|consen 176 LVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD 229 (364)
T ss_pred eccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC
Confidence 8764433 345789999999988875 6899999999999999999999998764
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.1e-32 Score=294.80 Aligned_cols=201 Identities=22% Similarity=0.277 Sum_probs=177.3
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
.+....|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 93 (329)
T PTZ00263 14 SWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRV 93 (329)
T ss_pred CCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEE
Confidence 345678999999999999999999875 48889999987542 12345688999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....
T Consensus 94 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 94 YFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred EEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 99999999999999998543 4888999999999999999999 9999999999999999999999999999998764
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. .....+++.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 170 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 218 (329)
T PTZ00263 170 DR----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD 218 (329)
T ss_pred CC----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC
Confidence 32 22346899999999999999999999999999999999999999653
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.5e-32 Score=290.08 Aligned_cols=196 Identities=22% Similarity=0.283 Sum_probs=173.6
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.++...++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 5889999999999999999875 58899999986432 1234568899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 82 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~--- 154 (291)
T cd05612 82 YVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR--- 154 (291)
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC---
Confidence 999999999997543 4889999999999999999999 999999999999999999999999999998765431
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....+++.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 155 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~ 201 (291)
T cd05612 155 -TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD 201 (291)
T ss_pred -cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 22346889999999999999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.8e-32 Score=273.29 Aligned_cols=201 Identities=25% Similarity=0.302 Sum_probs=172.9
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCC-ccceeeeeEeCC------e
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQN-LVQLLGYCSVGE------E 731 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~-i~~~~~~~~~~~------~ 731 (885)
.|+..++||+|+||.||+|+.. +|+.||+|++.-... .......+|+.+++.++|+| |+++++++.... .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 4677788999999999999864 588999999975432 23456789999999999999 999999987766 7
Q ss_pred eEEEEecccCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA---ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
.++||||+ ..+|..+++... ...+...++.+..|++.|++||| +.+|+|||+||+||++++.|.+||+|||+|
T Consensus 92 l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccchH
Confidence 88999999 559999998755 45888899999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
+.+.-+... ......|..|.|||++.+. .|+...||||+||+++||++++..|.+..+
T Consensus 168 ra~~ip~~~-yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se 226 (323)
T KOG0594|consen 168 RAFSIPMRT-YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE 226 (323)
T ss_pred HHhcCCccc-ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH
Confidence 877643322 3446789999999999987 689999999999999999999988876544
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-32 Score=295.22 Aligned_cols=196 Identities=28% Similarity=0.335 Sum_probs=171.5
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccC-C-----CCccceeeeeEeCCeeEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVK-H-----QNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~-----~~i~~~~~~~~~~~~~~l 734 (885)
+|+|.+.||+|+||.|.+|.+.. ++.||||+++... ....+...|+++|+.++ | -|+++++++|...++.|+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 99999999999999999997654 8999999997654 33566778999999997 3 489999999999999999
Q ss_pred EEecccCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC--CCcEEEeeccCcccc
Q 047790 735 VYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND--YFEAKVSDFGLARLI 811 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~--~~~vkl~Dfg~a~~~ 811 (885)
|+|.+ ..+|.++++. +..+++...++.++.|++.+|.+|| +.+|||+|+||||||+.+ ...||++|||.|+..
T Consensus 266 VfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999 5699999985 4556999999999999999999999 999999999999999963 447999999999875
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.. .-+...-+..|.|||++.|.+|+.++||||||||++||++|.+.|.+..
T Consensus 342 ~q----~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 342 SQ----RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred CC----cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 43 2235678899999999999999999999999999999999987775543
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=293.71 Aligned_cols=200 Identities=21% Similarity=0.314 Sum_probs=175.2
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC--CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD--QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~--~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
.....|++.+.||+|+||.||+|.+.. +..||+|++.+.. ......+.+|+++++.++||||+++++++.+++..
T Consensus 27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~ 106 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYL 106 (340)
T ss_pred CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEE
Confidence 345679999999999999999997543 3689999986532 22345688899999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||+++|+|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+....
T Consensus 107 ~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 107 YLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 99999999999999998543 5899999999999999999999 9999999999999999999999999999997654
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. .....+|+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 183 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 231 (340)
T PTZ00426 183 TR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYAN 231 (340)
T ss_pred CC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCC
Confidence 31 23456899999999999999999999999999999999999999754
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-32 Score=296.63 Aligned_cols=196 Identities=24% Similarity=0.298 Sum_probs=174.4
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.|++.++||+|+||.||+|++.+ ++.||+|++.+.. ......+.+|+++++.++||||+++++++..++..|+|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 58999999999999999998764 8899999997543 1234568889999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 82 ~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---- 153 (333)
T cd05600 82 YVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---- 153 (333)
T ss_pred CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc----
Confidence 99999999999754 34889999999999999999999 99999999999999999999999999999876543
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......+++.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 154 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 201 (333)
T cd05600 154 YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGS 201 (333)
T ss_pred ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCC
Confidence 223456899999999999999999999999999999999999999753
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=291.50 Aligned_cols=193 Identities=20% Similarity=0.222 Sum_probs=168.1
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
+.||+|+||.||+|+.. +++.||+|++.+.. .....++.+|+++++.++||||+++++++..++..|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999865 58899999987543 222356778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCC
Q 047790 743 SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT 822 (885)
Q Consensus 743 sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~ 822 (885)
+|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++...... ......
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-~~~~~~ 155 (323)
T cd05571 81 ELFFHLSRE-RVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKTF 155 (323)
T ss_pred cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-Ccccce
Confidence 999988754 45899999999999999999999 9999999999999999999999999999987543211 122334
Q ss_pred CCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 823 ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 823 ~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.+++.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 197 (323)
T cd05571 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 197 (323)
T ss_pred ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCC
Confidence 689999999999999999999999999999999999999964
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-32 Score=301.66 Aligned_cols=201 Identities=22% Similarity=0.215 Sum_probs=172.1
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.|++.+.||+|+||.||+|+.. +++.||+|++.+.. .....++.+|+++++.++||+|+++++++.+++..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 4888999999999999999865 47889999997543 1224568899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC-
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES- 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~- 816 (885)
|+++|+|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||++........
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 82 YIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 999999999987543 4888999999999999999999 99999999999999999999999999998754311000
Q ss_pred ---------------------------------------------CcccCCCCCCccCCcccccCCCCCCcchhHHHHHH
Q 047790 817 ---------------------------------------------HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVI 851 (885)
Q Consensus 817 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvv 851 (885)
.......||..|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 00112458999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCC
Q 047790 852 LLELVTGKQPTGPEF 866 (885)
Q Consensus 852 l~elltg~~P~~~~~ 866 (885)
+|||++|+.||....
T Consensus 238 l~elltG~~Pf~~~~ 252 (381)
T cd05626 238 LFEMLVGQPPFLAPT 252 (381)
T ss_pred HHHHHhCCCCCcCCC
Confidence 999999999997543
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-32 Score=300.01 Aligned_cols=201 Identities=23% Similarity=0.250 Sum_probs=174.2
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
...|++.+.||+|+||.||+|+... ++.+|+|++.+.. ......+.+|+++++.++||||+++++++..++..|+|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 4679999999999999999998764 7889999986532 12345678899999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++|+|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||.+.......
T Consensus 122 ~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 122 MEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 9999999999999753 4788899999999999999999 9999999999999999999999999999998765433
Q ss_pred CCcccCCCCCCccCCcccccCCC----CCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGR----ANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
........+|+.|+|||++.+.. ++.++|+||+||++|||++|+.||...
T Consensus 197 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 22334557899999999987643 788999999999999999999999753
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-32 Score=302.84 Aligned_cols=200 Identities=24% Similarity=0.226 Sum_probs=171.9
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+|++.++||+|+||.||+|... +++.||+|++.+.. .....++.+|++++++++||||+++++++.++...|+|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 5889999999999999999765 58899999986532 2234567889999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++... ..+++..++.++.|++.|++||| +.||+||||||+||+++.++.++++|||+++.+......
T Consensus 82 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 82 FLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 99999999998754 45889999999999999999999 999999999999999999999999999998643211000
Q ss_pred ----------------------------------------------cccCCCCCCccCCcccccCCCCCCcchhHHHHHH
Q 047790 818 ----------------------------------------------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVI 851 (885)
Q Consensus 818 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvv 851 (885)
......||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 237 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence 0012358999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCC
Q 047790 852 LLELVTGKQPTGPE 865 (885)
Q Consensus 852 l~elltg~~P~~~~ 865 (885)
+|||++|+.||...
T Consensus 238 l~elltG~~Pf~~~ 251 (377)
T cd05629 238 MFECLIGWPPFCSE 251 (377)
T ss_pred hhhhhcCCCCCCCC
Confidence 99999999999643
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-32 Score=300.86 Aligned_cols=200 Identities=25% Similarity=0.267 Sum_probs=173.4
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+++++.++||||+++++++.++...|+|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 5889999999999999999875 48899999997532 2233567889999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++++|||++..+......
T Consensus 82 ~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 82 YLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred CCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence 999999999987544 5899999999999999999999 999999999999999999999999999998754321100
Q ss_pred -------------------------------------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCC
Q 047790 818 -------------------------------------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQ 860 (885)
Q Consensus 818 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~ 860 (885)
......||+.|+|||++.+..++.++||||+||++|||++|+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 0112358999999999999999999999999999999999999
Q ss_pred CCCCC
Q 047790 861 PTGPE 865 (885)
Q Consensus 861 P~~~~ 865 (885)
||...
T Consensus 238 Pf~~~ 242 (364)
T cd05599 238 PFCSD 242 (364)
T ss_pred CCCCC
Confidence 99643
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=284.14 Aligned_cols=198 Identities=25% Similarity=0.314 Sum_probs=172.3
Q ss_pred EeecceecccCCceEEEEEe-CCCCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 663 IVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+++++.++|++|+++++++.+++..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67889999999999999986 4689999999865431 2234577899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 739 MVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
+++++|.+.+... ...+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||.+..+....
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-- 156 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC--
Confidence 9999999887643 335899999999999999999999 9999999999999999999999999999998754322
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 204 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKR 204 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCC
Confidence 223446899999999999999999999999999999999999999753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=288.29 Aligned_cols=194 Identities=20% Similarity=0.227 Sum_probs=168.0
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
+.||+|+||.||+|+.. +++.||+|++.... .....++.+|+++++.++||||+++++++..++..|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 47999999999999865 58899999987543 223356778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCC
Q 047790 743 SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT 822 (885)
Q Consensus 743 sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~ 822 (885)
+|..++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++....... ......
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~ 155 (323)
T cd05595 81 ELFFHLSRE-RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKTF 155 (323)
T ss_pred cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Cccccc
Confidence 999888754 35899999999999999999999 9999999999999999999999999999887532211 122234
Q ss_pred CCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 823 ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 823 ~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+++.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 198 (323)
T cd05595 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198 (323)
T ss_pred cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCC
Confidence 6899999999999999999999999999999999999999643
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-32 Score=301.52 Aligned_cols=200 Identities=22% Similarity=0.229 Sum_probs=171.6
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+|++.++||+|+||.||+|+.. +++.||+|++.+.. ......+.+|++++++++||+|+++++.+.+++..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5889999999999999999865 58889999987543 1234568899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC--
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-- 815 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~-- 815 (885)
|+++|+|.+++... ..+++..++.++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 82 YIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 99999999998754 34889999999999999999999 9999999999999999999999999999875321000
Q ss_pred --------------------------------------------CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHH
Q 047790 816 --------------------------------------------SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVI 851 (885)
Q Consensus 816 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvv 851 (885)
........||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 000112358899999999999999999999999999
Q ss_pred HHHHHhCCCCCCCC
Q 047790 852 LLELVTGKQPTGPE 865 (885)
Q Consensus 852 l~elltg~~P~~~~ 865 (885)
+|||++|+.||...
T Consensus 238 l~elltG~~Pf~~~ 251 (382)
T cd05625 238 LYEMLVGQPPFLAQ 251 (382)
T ss_pred HHHHHhCCCCCCCC
Confidence 99999999999753
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-32 Score=302.15 Aligned_cols=201 Identities=23% Similarity=0.236 Sum_probs=172.3
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+|++.+.||+|+||.||+|+.. +++.||+|++.+.. ......+.+|+++++.++||+|+++++.+.+++..|+|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 5899999999999999999865 48899999986532 1234568899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC--
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-- 815 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~-- 815 (885)
|+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||+|..+....
T Consensus 82 ~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 82 YIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 999999999997543 4888999999999999999999 9999999999999999999999999999875321000
Q ss_pred ----------------------------------------CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHH
Q 047790 816 ----------------------------------------SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLEL 855 (885)
Q Consensus 816 ----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~el 855 (885)
........||+.|+|||++.+..++.++||||+||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0001123589999999999999999999999999999999
Q ss_pred HhCCCCCCCCC
Q 047790 856 VTGKQPTGPEF 866 (885)
Q Consensus 856 ltg~~P~~~~~ 866 (885)
++|+.||....
T Consensus 238 l~G~~Pf~~~~ 248 (376)
T cd05598 238 LVGQPPFLADT 248 (376)
T ss_pred hhCCCCCCCCC
Confidence 99999997543
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-32 Score=280.36 Aligned_cols=209 Identities=22% Similarity=0.323 Sum_probs=186.3
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+.+.|.+++.||+|.|++|-.|++- .|..||||++.+..-. ...++.+|++.|+-++||||+++|++...+...|+|
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 4467999999999999999999865 5899999999876533 356899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE-cCCCcEEEeeccCcccccCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL-NDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~-~~~~~vkl~Dfg~a~~~~~~ 814 (885)
.|.=.+|+|.++|.+++..+.+..+++++.||+.|+.|+| +..+||||+||+|+.+ .+.|-||++|||++-.+.+.
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 9999999999999999888999999999999999999999 9999999999999876 57789999999999888764
Q ss_pred CCCcccCCCCCCccCCcccccCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRAN-ERGDIYSFGVILLELVTGKQPTGPEFEDKDGG 872 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslGvvl~elltg~~P~~~~~~~~~~~ 872 (885)
.+. ...+|...|-|||++.+..|+ ++.||||+||++|.++.|++||....+.|...
T Consensus 173 ~kL--~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLT 229 (864)
T KOG4717|consen 173 KKL--TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLT 229 (864)
T ss_pred chh--hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhh
Confidence 333 456899999999999999886 67899999999999999999999877766543
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-32 Score=283.41 Aligned_cols=202 Identities=25% Similarity=0.370 Sum_probs=178.6
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..|.-.++||+|.||.||+|.+. .++.||+|++.-... .+.+++.+|+.++.+++++||.++|+.+..+...+++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 34777799999999999999865 488999999986553 3457899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+.||++.+.++.. ..+++..+..+..+++.|+.|+| .++.+|||||+.||++...|.||++|||.+..........
T Consensus 93 ~~gGsv~~lL~~~-~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr 168 (467)
T KOG0201|consen 93 CGGGSVLDLLKSG-NILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR 168 (467)
T ss_pred hcCcchhhhhccC-CCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhhcc
Confidence 9999999999843 33588888899999999999999 9999999999999999999999999999887765533333
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
....||++|||||++....|+.++||||||+++|||.+|.+||....+
T Consensus 169 -~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP 216 (467)
T KOG0201|consen 169 -KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP 216 (467)
T ss_pred -ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc
Confidence 667899999999999999999999999999999999999999875433
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=286.99 Aligned_cols=199 Identities=23% Similarity=0.271 Sum_probs=170.0
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCC-CccceeeeeEeCCeeEEEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQ-NLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~-~i~~~~~~~~~~~~~~lv~ 736 (885)
+|++.+.||+|+||.||+|+..+ ++.||+|++.+.. ....+.+..|.+++..+.|+ +|+.+++++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 47899999999999999998764 7789999987542 22345677899999988765 5888899999889999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||++.......
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~- 155 (324)
T cd05587 81 EYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG- 155 (324)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC-
Confidence 9999999999987543 4889999999999999999999 9999999999999999999999999999986532211
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......++..|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~ 204 (324)
T cd05587 156 KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 204 (324)
T ss_pred CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 1223346899999999999999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=286.67 Aligned_cols=191 Identities=25% Similarity=0.277 Sum_probs=167.1
Q ss_pred ecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCH
Q 047790 669 IGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSL 744 (885)
Q Consensus 669 lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL 744 (885)
||+|+||.||+|+..+ ++.||+|++.+.. ......+.+|++++++++||||+++++++..++..++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 6999999999998764 7889999987532 22345678899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCC
Q 047790 745 DDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD 824 (885)
Q Consensus 745 ~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~ 824 (885)
.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+...... ........+
T Consensus 81 ~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~g 155 (312)
T cd05585 81 FHHLQRE-GRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-DDKTNTFCG 155 (312)
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC-CCccccccC
Confidence 9998754 45899999999999999999999 999999999999999999999999999998754322 122234568
Q ss_pred CCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 825 TIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 825 ~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
++.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~ 195 (312)
T cd05585 156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYD 195 (312)
T ss_pred CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCC
Confidence 9999999999999999999999999999999999999964
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=276.79 Aligned_cols=206 Identities=25% Similarity=0.278 Sum_probs=171.0
Q ss_pred eeceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--------------ccHHHHHHHHHHhcccCCCC
Q 047790 654 VGSVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--------------QCDREFAAEMETLDMVKHQN 718 (885)
Q Consensus 654 ~g~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--------------~~~~~~~~E~~~l~~l~~~~ 718 (885)
..+...+..|++.+.||+|.||.|-+|+.. +++.||+|++.+... ...++..+|+.|++++.|||
T Consensus 90 ~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~n 169 (576)
T KOG0585|consen 90 DQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPN 169 (576)
T ss_pred cccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcC
Confidence 455667788999999999999999999864 589999999975321 11247889999999999999
Q ss_pred ccceeeeeEeC--CeeEEEEecccCCCHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc
Q 047790 719 LVQLLGYCSVG--EEKLLVYEYMVNGSLDDWLRNRAAS-LDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795 (885)
Q Consensus 719 i~~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~-~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~ 795 (885)
|++++++..+. +..|||+|||..|.+...-. .+. +++.+++.++.++..+|+||| .+||+||||||.|++++
T Consensus 170 VV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~--d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~ 244 (576)
T KOG0585|consen 170 VVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPP--DKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLS 244 (576)
T ss_pred eeEEEEeecCcccCceEEEEEeccCCccccCCC--CcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEc
Confidence 99999998654 67899999998887755332 233 899999999999999999999 99999999999999999
Q ss_pred CCCcEEEeeccCcccccCCCC----CcccCCCCCCccCCcccccCCC----CCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 796 DYFEAKVSDFGLARLISDCES----HVSTDTADTIGYVPSEYGQAGR----ANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 796 ~~~~vkl~Dfg~a~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.+|.|||+|||-+..+..... ..-....||+.|+|||...+.. .+.+.||||+||++|.++.|+.||..
T Consensus 245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~ 321 (576)
T KOG0585|consen 245 SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD 321 (576)
T ss_pred CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc
Confidence 999999999998876632111 1112367999999999877732 36789999999999999999999975
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=289.29 Aligned_cols=200 Identities=24% Similarity=0.233 Sum_probs=173.7
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+|++.+.||+|+||.||+|+.. +++.||+|++.+.. ......+.+|+.+++.++||+|+++++++..++..|+|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 5899999999999999999865 48899999987532 2234567889999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++......+++..+..++.|++.|++||| +++|+||||||+||+++.++.++|+|||.+..+......
T Consensus 82 ~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 158 (331)
T cd05597 82 YYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV 158 (331)
T ss_pred cCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc
Confidence 99999999999865566899999999999999999999 999999999999999999999999999998766543332
Q ss_pred cccCCCCCCccCCcccccC-----CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQA-----GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......+++.|+|||++.. ..++.++||||+||++|+|++|+.||..
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 3333468999999999863 4578899999999999999999999965
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=293.89 Aligned_cols=202 Identities=22% Similarity=0.229 Sum_probs=174.4
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
+....|++.+.||+|+||.||+|++. +++.+|+|++.+.. ......+.+|+.+++.++||||+++++++..++..+
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY 119 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 34478999999999999999999876 47889999986432 122345778999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++... .+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 120 lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 120 MVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 194 (371)
T ss_pred EEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence 999999999999998753 3788899999999999999999 99999999999999999999999999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCC----CCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGR----ANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..........+|+.|+|||++.+.. ++.++||||+||++|||++|+.||..
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 195 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred CCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 3333334557899999999987643 78899999999999999999999974
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-31 Score=286.81 Aligned_cols=194 Identities=20% Similarity=0.235 Sum_probs=168.4
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
+.||+|+||.||+|+.. +++.||+|++.+.. .....++.+|+++++.++||+|+++++++..++..++||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999865 58899999987542 223456788999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCC
Q 047790 743 SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT 822 (885)
Q Consensus 743 sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~ 822 (885)
+|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++....... ......
T Consensus 81 ~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~~ 155 (328)
T cd05593 81 ELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATMKTF 155 (328)
T ss_pred CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-cccccc
Confidence 999888754 45899999999999999999999 9999999999999999999999999999987533211 122334
Q ss_pred CCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 823 ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 823 ~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+++.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~ 198 (328)
T cd05593 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198 (328)
T ss_pred cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCC
Confidence 6899999999999999999999999999999999999999643
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=286.21 Aligned_cols=203 Identities=25% Similarity=0.303 Sum_probs=182.4
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccc---cHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ---CDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~ 733 (885)
....|++.+.||+|.||.||+++.+. |+.+|+|++.+.... +.....+|+++|+++. ||||+.++++|++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 44579999999999999999998876 999999999876543 3468999999999999 999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC----CcEEEeeccCcc
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY----FEAKVSDFGLAR 809 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~----~~vkl~Dfg~a~ 809 (885)
+|||++.||.|.+.+... . +++..+..++.|++++++||| +.||+|||+||+|+++... +.++++|||+|.
T Consensus 113 lvmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 999999999999999866 3 999999999999999999999 9999999999999999632 479999999999
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFED 868 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~ 868 (885)
.... ........||++|+|||++....|+..+||||+||++|.|+.|..||....+.
T Consensus 188 ~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~ 244 (382)
T KOG0032|consen 188 FIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF 244 (382)
T ss_pred EccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh
Confidence 8776 34455678999999999999999999999999999999999999999866543
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=283.31 Aligned_cols=200 Identities=28% Similarity=0.377 Sum_probs=172.0
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+|++.++||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56999999999999999999865 58889999986543 23345678999999999999999999999988899999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++ ++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+|++|||.+....... ..
T Consensus 85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-~~ 159 (288)
T cd07871 85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-KT 159 (288)
T ss_pred CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC-cc
Confidence 965 999988766666889999999999999999999 9999999999999999999999999999987654322 12
Q ss_pred ccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~ 207 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGS 207 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 233467889999998865 56899999999999999999999999654
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-31 Score=285.63 Aligned_cols=194 Identities=28% Similarity=0.379 Sum_probs=167.6
Q ss_pred ceecccCCceEEEEEe----CCCCeEEEEEecccc----cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 667 NVIGGGGFRTAFKGTM----PDQKTVAVKKLSQAT----GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~----~~~~~valK~~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
++||+|+||.||+|+. ..++.||+|++.... ......+..|++++++++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6899999999999975 357889999987532 12235678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++... ..+.+..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++...... ...
T Consensus 82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 156 (323)
T cd05584 82 LSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE-GTV 156 (323)
T ss_pred CCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-CCc
Confidence 9999999998754 34788889999999999999999 999999999999999999999999999998654321 122
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....+++.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~ 203 (323)
T cd05584 157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAE 203 (323)
T ss_pred ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCC
Confidence 23456899999999999999999999999999999999999999753
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-31 Score=288.95 Aligned_cols=199 Identities=24% Similarity=0.287 Sum_probs=171.4
Q ss_pred EEeecceecccCCceEEEEEeC----CCCeEEEEEecccc----cccHHHHHHHHHHhcccC-CCCccceeeeeEeCCee
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQAT----GQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~----~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~ 732 (885)
.|++.+.||+|+||.||+|+.. +++.||+|++.+.. ....+++..|+++++.++ ||+|+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 3889999999999999998753 57889999986532 122456788999999995 89999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||+++++|.+++..+. .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++.+.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 99999999999999987543 4899999999999999999999 9999999999999999999999999999988654
Q ss_pred CCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
...........++..|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 157 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 209 (332)
T cd05614 157 SEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL 209 (332)
T ss_pred ccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence 4333333345689999999998875 478899999999999999999999964
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=289.85 Aligned_cols=200 Identities=24% Similarity=0.230 Sum_probs=173.7
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+|++.+.||+|+||.||+|+.. +++.||+|++.+.. ......+.+|+.+++.++|++|+++++++..++..|+|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 5899999999999999999875 47889999986532 1223457789999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|++||+|.+++......+++..+..++.|++.|++|+| +.+|+||||||+||+++.++.+||+|||.+..+......
T Consensus 82 y~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 158 (331)
T cd05624 82 YYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV 158 (331)
T ss_pred CCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce
Confidence 99999999999865556899999999999999999999 999999999999999999999999999998776543332
Q ss_pred cccCCCCCCccCCcccccC-----CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQA-----GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......+++.|+|||++.+ ..++.++|+||+||++|||++|+.||..
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 159 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 3334568999999998876 4678899999999999999999999964
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=291.60 Aligned_cols=202 Identities=22% Similarity=0.221 Sum_probs=174.3
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
....|++.++||+|+||.||+|+.. +++.||+|++.+.. ......+.+|+++++.++||+|+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4567999999999999999999875 48889999986532 2233457789999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++|+|.+++... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 121 v~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 99999999999998753 3788889999999999999999 999999999999999999999999999999876543
Q ss_pred CCCcccCCCCCCccCCcccccCC----CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAG----RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.........+++.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 250 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 250 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCC
Confidence 33333445789999999988654 3788999999999999999999999753
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=282.33 Aligned_cols=200 Identities=27% Similarity=0.368 Sum_probs=171.9
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+|++.++||+|+||.||+|+.. +++.||+|++..... .....+.+|+++++.++||||+++++++..+...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 56999999999999999999876 588999999875432 2335677899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+. +++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....... ..
T Consensus 85 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~ 159 (303)
T cd07869 85 VH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-HT 159 (303)
T ss_pred CC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-cc
Confidence 95 6888888766666899999999999999999999 9999999999999999999999999999987543321 22
Q ss_pred ccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....+++.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 207 (303)
T cd07869 160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGM 207 (303)
T ss_pred CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 233567899999998765 45788999999999999999999999753
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=290.62 Aligned_cols=204 Identities=27% Similarity=0.375 Sum_probs=177.0
Q ss_pred eEEeecceecccCCceEEEEEe-CCCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeC------Cee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG------EEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~------~~~ 732 (885)
+.|...+.||+|+||.||+++. ..|+.||+|.+++.. ....++..+|++++++++||||++++++-.++ +..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 5578899999999999999995 459999999998754 33457788999999999999999999987654 356
Q ss_pred EEEEecccCCCHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc----CCCcEEEeecc
Q 047790 733 LLVYEYMVNGSLDDWLRN--RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN----DYFEAKVSDFG 806 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~--~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~----~~~~vkl~Dfg 806 (885)
.+|||||.||||..+++. ...++++..+..+..++..|+.||| +.||+||||||.||++- ..-..||+|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 899999999999999985 3456999999999999999999999 99999999999999994 22346999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~~~~~ 869 (885)
+|+...+. .......||..|.+||.... +.|+.-+|.|||||++|++.||..||.+.....
T Consensus 170 ~Arel~d~--s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk 231 (732)
T KOG4250|consen 170 AARELDDN--SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPK 231 (732)
T ss_pred ccccCCCC--CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcc
Confidence 99988753 35667789999999999885 788899999999999999999999998765443
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-31 Score=282.88 Aligned_cols=200 Identities=26% Similarity=0.317 Sum_probs=172.7
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 5899999999999999999876 47889999987543 22345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++.+..+.. ....+++..++.++.|++.|++||| +.+|+||||||+||+++.++.+||+|||.+..........
T Consensus 82 ~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (287)
T cd07848 82 VEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNAN 157 (287)
T ss_pred CCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccc
Confidence 98876665544 3455899999999999999999999 9999999999999999999999999999998765432222
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~ 204 (287)
T cd07848 158 YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGE 204 (287)
T ss_pred ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCC
Confidence 33456889999999999989999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=296.17 Aligned_cols=200 Identities=25% Similarity=0.268 Sum_probs=176.5
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+|++.+.||+|+||.||+|+.. +++.||+|++.+.. ......+.+|++++..++||+|+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 5889999999999999999876 58899999987543 1234568889999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC--
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-- 815 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~-- 815 (885)
|+++++|.+++... ..+++..++.++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 157 (350)
T cd05573 82 YMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR 157 (350)
T ss_pred CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence 99999999999865 45899999999999999999999 8999999999999999999999999999987765422
Q ss_pred --------------------------CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 --------------------------SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
........+++.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 11223446899999999999999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=296.44 Aligned_cols=201 Identities=24% Similarity=0.255 Sum_probs=173.4
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++..++||+|+++++.+.+++..|+|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 4888999999999999999875 48899999987532 2234567889999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC-
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES- 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~- 816 (885)
|+++++|.+++... ..+++..++.++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+........
T Consensus 82 ~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 82 FLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred CCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 99999999998754 34899999999999999999999 99999999999999999999999999999865422100
Q ss_pred ---------------------------------CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 817 ---------------------------------HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 817 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 01123468999999999999999999999999999999999999997
Q ss_pred CCC
Q 047790 864 PEF 866 (885)
Q Consensus 864 ~~~ 866 (885)
...
T Consensus 238 ~~~ 240 (360)
T cd05627 238 SET 240 (360)
T ss_pred CCC
Confidence 543
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=288.92 Aligned_cols=194 Identities=24% Similarity=0.245 Sum_probs=168.4
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.+|++.++||+|+||.||+|.+. .++.||+|+.. ...+.+|++++++++||||+++++++..+...++|||++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 46999999999999999999865 48889999643 245678999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++..++... ..+++..+..++.|++.|++|+| +.||+||||||+||+++..+.++|+|||.|...........
T Consensus 166 -~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~ 240 (391)
T PHA03212 166 -KTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKY 240 (391)
T ss_pred -CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccccc
Confidence 46888888654 34889999999999999999999 89999999999999999999999999999875433222233
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 241 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~ 286 (391)
T PHA03212 241 YGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEK 286 (391)
T ss_pred ccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCc
Confidence 3457899999999999999999999999999999999999887543
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=284.77 Aligned_cols=199 Identities=23% Similarity=0.256 Sum_probs=169.9
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc---ccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG---QCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 736 (885)
+|++.+.||+|+||.||+|+... ++.||+|++.+... ........|.+++..+. ||+|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 47889999999999999998764 77899999875432 22345667888887764 789999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||+++|+|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+...... .
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~-~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD-G 155 (323)
T ss_pred cCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC-C
Confidence 9999999999887543 4889999999999999999999 999999999999999999999999999998754321 1
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......+++.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~ 204 (323)
T cd05616 156 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 204 (323)
T ss_pred CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCC
Confidence 2223456899999999999999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=294.08 Aligned_cols=200 Identities=22% Similarity=0.225 Sum_probs=175.4
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.|++.+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|+++++.++||+|+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 5889999999999999999865 588999999976432 234568889999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++......+++..+..++.|++.|++|+| +.+|+||||||+||+++.++.+||+|||.+..+......
T Consensus 82 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 158 (330)
T cd05601 82 YQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV 158 (330)
T ss_pred CCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce
Confidence 99999999999876566999999999999999999999 999999999999999999999999999999876543333
Q ss_pred cccCCCCCCccCCccccc------CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQ------AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~------~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......+++.|+|||++. +..++.++||||+||++|||++|+.||..
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 211 (330)
T cd05601 159 NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHE 211 (330)
T ss_pred eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCC
Confidence 333456899999999987 45678899999999999999999999964
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=283.92 Aligned_cols=197 Identities=20% Similarity=0.288 Sum_probs=168.2
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHh---cccCCCCccceeeeeEeCCeeEEE
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETL---DMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l---~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
|++.+.||+|+||.||+|.+. +++.||+|++++.. ....+.+.+|++++ +.++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 678899999999999999865 58899999997542 22234566676665 566799999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|...+.. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 81 ~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 81 MEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC
Confidence 999999999988864 35899999999999999999999 9999999999999999999999999999886543211
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......+++.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 156 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~ 204 (324)
T cd05589 156 -DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD 204 (324)
T ss_pred -CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC
Confidence 1223456899999999999999999999999999999999999999753
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-33 Score=263.16 Aligned_cols=200 Identities=22% Similarity=0.273 Sum_probs=175.1
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEeccc--ccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQA--TGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
.-..|++.+.||+|.|+.||++.+ +.|+.+|+|++... ...+.+.+.+|++|-+.++||||+++.+.+......|+|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 345688999999999999999864 45888999988643 233567899999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc---CCCcEEEeeccCccccc
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN---DYFEAKVSDFGLARLIS 812 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~---~~~~vkl~Dfg~a~~~~ 812 (885)
+|++.|++|-.-+-.+. .+++..+.....||++|+.|+| ..+|+|||+||+|+++. ....||++|||.|...+
T Consensus 89 Fe~m~G~dl~~eIV~R~-~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVARE-FYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred EecccchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 99999999876555443 3889999999999999999999 99999999999999995 34469999999998887
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
+...-..+.||++|+|||+....+|+..+|||+-||++|-++.|++||.+
T Consensus 165 --~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~ 214 (355)
T KOG0033|consen 165 --DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 214 (355)
T ss_pred --CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC
Confidence 34445567899999999999999999999999999999999999999976
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=281.81 Aligned_cols=194 Identities=27% Similarity=0.372 Sum_probs=164.9
Q ss_pred ceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcc-cCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDM-VKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
++||+|+||.||+|+..+ ++.||+|+++... .........|.+++.. .+||+|+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 479999999999998754 7889999987543 1223445566777664 4799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|..++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||.+....... .....
T Consensus 81 g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~ 155 (316)
T cd05592 81 GDLMFHIQSSG-RFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKAST 155 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Ccccc
Confidence 99999887543 5899999999999999999999 8999999999999999999999999999987643322 22234
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..++..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~ 199 (316)
T cd05592 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE 199 (316)
T ss_pred ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Confidence 56899999999999999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-31 Score=286.91 Aligned_cols=201 Identities=24% Similarity=0.245 Sum_probs=173.1
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+|++.++||+|+||.||+++... ++.+|+|++.+.. ......+.+|+.++..++|++|+++++++.++...++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 58899999999999999998765 7789999986532 1223457889999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++|+|.+++......+++..++.++.|++.|++||| +.+|+||||||+||+++.++.++|+|||.+.........
T Consensus 82 y~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~ 158 (332)
T cd05623 82 YYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 158 (332)
T ss_pred ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcc
Confidence 99999999999865566899999999999999999999 999999999999999999999999999998765433333
Q ss_pred cccCCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......|++.|+|||++. ...++.++||||+||++|||++|+.||...
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 159 QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 333456899999999886 346788999999999999999999999643
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-31 Score=285.74 Aligned_cols=194 Identities=19% Similarity=0.221 Sum_probs=167.3
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
+.||+|+||.||+|... +++.||+|++.+... ....++..|+++++.++||||+++++++..++..|+||||++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999864 588999999975431 22356778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 743 SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 743 sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
+|..++... ..+++..+..++.|++.|++||| + .||+||||||+||+++.++.+||+|||.+....... .....
T Consensus 81 ~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~ 155 (325)
T cd05594 81 ELFFHLSRE-RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATMKT 155 (325)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-ccccc
Confidence 999888754 35899999999999999999999 7 799999999999999999999999999987533211 11223
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..++..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~ 199 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 199 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCC
Confidence 46899999999999999999999999999999999999999643
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=284.69 Aligned_cols=194 Identities=23% Similarity=0.301 Sum_probs=166.6
Q ss_pred ceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
++||+|+||.||+|+..+ ++.||+|++.+.. ......+..|.++++.+ +||+|+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 469999999999998754 7889999987543 22234567788888765 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|...+... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+....... .....
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~~ 155 (321)
T cd05591 81 GDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTTTT 155 (321)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCC-ccccc
Confidence 9999988754 34889999999999999999999 9999999999999999999999999999987543222 22234
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..++..|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~ 199 (321)
T cd05591 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEAD 199 (321)
T ss_pred cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCC
Confidence 56899999999999999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=283.44 Aligned_cols=194 Identities=24% Similarity=0.305 Sum_probs=166.6
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
+.||+|+||.||+|+.. +++.||+|++.+.. ......+..|.++++.+ +||+|+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999875 48889999987542 22345667888888776 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||.+....... .....
T Consensus 81 g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~~~ 155 (320)
T cd05590 81 GDLMFHIQKS-RRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTTST 155 (320)
T ss_pred chHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Ccccc
Confidence 9999988754 34899999999999999999999 9999999999999999999999999999987543211 22233
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..+++.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~ 199 (320)
T cd05590 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE 199 (320)
T ss_pred cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 56899999999999999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=282.87 Aligned_cols=193 Identities=20% Similarity=0.278 Sum_probs=166.8
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
+.||+|+||.||+|++. +++.||+|++++... .....+..|..+++++ +||||+++++++..+...|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 47899999999999865 588899999976432 2234577899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|.+++... ..+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||.+...... ......
T Consensus 81 g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~~~~ 155 (329)
T cd05588 81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDTTST 155 (329)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccC-CCcccc
Confidence 9999888754 45899999999999999999999 999999999999999999999999999998643221 122234
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..++..|+|||++.+..++.++|+||+||++|+|++|+.||..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence 5689999999999999999999999999999999999999963
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=281.36 Aligned_cols=198 Identities=22% Similarity=0.279 Sum_probs=169.5
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEEe
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e 737 (885)
|++.+.||+|+||.||+|... +++.||+|++.+.. ......+..|.++++.+. |++|+++++++..++..|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 678899999999999999865 58899999987542 122345778888888776 5778889999998899999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+....... .
T Consensus 82 y~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~-~ 156 (323)
T cd05615 82 YVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG-V 156 (323)
T ss_pred CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-c
Confidence 99999999988754 34899999999999999999999 9999999999999999999999999999987543211 2
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++.+..++.++|+||+||++|+|++|+.||...
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~ 204 (323)
T cd05615 157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 204 (323)
T ss_pred cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCC
Confidence 223346899999999999999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=280.91 Aligned_cols=194 Identities=24% Similarity=0.329 Sum_probs=165.6
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
++||+|+||.||+|++. +++.||+|++++.. .........|.+++... .||+|+++++++.+++..|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 47999999999999876 48889999987542 22334566788887654 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|..++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+....... .....
T Consensus 81 g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 155 (316)
T cd05620 81 GDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRAST 155 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-Cceec
Confidence 9999988754 44889999999999999999999 9999999999999999999999999999986432211 12234
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..++..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~ 199 (316)
T cd05620 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD 199 (316)
T ss_pred cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 56899999999999999999999999999999999999999743
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-30 Score=278.52 Aligned_cols=194 Identities=25% Similarity=0.341 Sum_probs=165.7
Q ss_pred ceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcc-cCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDM-VKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
+.||+|+||.||+|++.+ ++.||+|+++... .........|..+++. .+||+|+++++++.+++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 479999999999998764 7889999987642 2233456677888775 4899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+....... .....
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 155 (316)
T cd05619 81 GDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTCT 155 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Cceee
Confidence 9999998754 34889999999999999999999 9999999999999999999999999999987532211 12233
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..++..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~ 199 (316)
T cd05619 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGH 199 (316)
T ss_pred ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCC
Confidence 46899999999999999999999999999999999999999643
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=280.73 Aligned_cols=201 Identities=24% Similarity=0.319 Sum_probs=179.4
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCe-eEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEE-KLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~-~~lv~ 736 (885)
..|++.+++|+|+||.++.++++ +.+.+|+|++.-+... ..+...+|+.++++++||||+.+.+.|..++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 46899999999999999998764 5788999999765433 23467899999999999999999999988777 89999
Q ss_pred ecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 737 EYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
+|++||++.+.+.+.. ..+++..+..|+.|++.|+.||| +.+|+|||+|+.|||++.++.|+++|||+|+...++.
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 9999999999998644 66999999999999999999999 9999999999999999999999999999999988754
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ......||+.|+.||.+.+.+|..++|+||+||++|||++-+.+|...
T Consensus 161 ~-~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~ 209 (426)
T KOG0589|consen 161 S-LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS 209 (426)
T ss_pred h-hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc
Confidence 2 334578999999999999999999999999999999999999998743
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-30 Score=280.37 Aligned_cols=192 Identities=20% Similarity=0.280 Sum_probs=165.6
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
+.||+|+||.||+|+.. +++.||+|++.+... .....+..|+.++.++ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999865 478899999876432 2234577888888776 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|..++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||.+....... .....
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~~~~ 155 (329)
T cd05618 81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTST 155 (329)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Ccccc
Confidence 9999888754 45899999999999999999999 9999999999999999999999999999987532211 12234
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
..++..|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 568999999999999999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-32 Score=266.11 Aligned_cols=196 Identities=25% Similarity=0.369 Sum_probs=177.3
Q ss_pred EeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
|.+.++||+|.||.||+|.++. |..+|+|++.-. .+.+++..|+.|++++..|+|+++|+.+......|+|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 6778999999999999998765 889999998653 3568899999999999999999999988888899999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
|++.++++.+.+++++..+..+...-+++++||| ...-+|||||+.||++.-+|.+|++|||.|-...+. ......
T Consensus 113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT-MAKRNT 188 (502)
T KOG0574|consen 113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT-MAKRNT 188 (502)
T ss_pred CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhh-HHhhCc
Confidence 9999999999899999999999999999999999 777899999999999999999999999988665442 223356
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..||+.|||||++..-+|+.++|+||+|++..||..|++||..
T Consensus 189 VIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsD 231 (502)
T KOG0574|consen 189 VIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSD 231 (502)
T ss_pred cccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccc
Confidence 7899999999999999999999999999999999999999874
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-30 Score=292.00 Aligned_cols=203 Identities=23% Similarity=0.315 Sum_probs=174.6
Q ss_pred eeEEeecceecccCCceEEEEEeCC--CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD--QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~--~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
...|.+.+.||+|++|.||+|.... ++.||+|.+..........+.+|+++++.++||||+++++++..++..|+|||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 3459999999999999999997543 56788887755444444567889999999999999999999999999999999
Q ss_pred cccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 738 YMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 738 ~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|+++|+|.+++.. ....+++..+..++.|++.|++|+| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 9999999988753 2345889999999999999999999 999999999999999999999999999999876542
Q ss_pred CC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~ 274 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP 274 (478)
T ss_pred cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 21 1233456899999999999999999999999999999999999999743
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=281.83 Aligned_cols=194 Identities=27% Similarity=0.315 Sum_probs=164.2
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHH-HhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEME-TLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
+.||+|+||.||+|.+. +++.||+|++.+... ....++..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 47999999999999875 588999999875321 22334455544 46788999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|..++... ..+++..+..++.|+++|++||| +.||+||||||+||+++.++.+||+|||++...... ......
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~ 155 (323)
T cd05575 81 GELFFHLQRE-RSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTTST 155 (323)
T ss_pred CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCcccc
Confidence 9999988754 45889999999999999999999 999999999999999999999999999998653221 122234
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..+++.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 199 (323)
T cd05575 156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (323)
T ss_pred ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC
Confidence 46899999999999999999999999999999999999999653
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=284.79 Aligned_cols=202 Identities=27% Similarity=0.429 Sum_probs=167.6
Q ss_pred eEEeecceecccCCceEEEEEe------CCCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeC-Ce
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVG-EE 731 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~-~~ 731 (885)
.+|++.++||+|+||.||+|.+ .+++.||+|++..... .....+.+|+++++.+ +||||+++++++... ..
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP 86 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence 4799999999999999999974 2356799999875432 2345688999999999 899999999987654 46
Q ss_pred eEEEEecccCCCHHHHHhhcC-----------------------------------------------------------
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA----------------------------------------------------------- 752 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~----------------------------------------------------------- 752 (885)
.+++|||+++|+|.+++....
T Consensus 87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T cd05102 87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL 166 (338)
T ss_pred eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence 789999999999999987421
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC-cccCCCCCCccC
Q 047790 753 --ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH-VSTDTADTIGYV 829 (885)
Q Consensus 753 --~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~ 829 (885)
..+++..+..++.|+++|++||| +.||+||||||+||+++.++.+||+|||+++........ ......++..|+
T Consensus 167 ~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 243 (338)
T cd05102 167 WKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWM 243 (338)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcccc
Confidence 23677888999999999999999 999999999999999999999999999999765432211 112234567899
Q ss_pred CcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 830 PSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 830 aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
|||++.+..++.++|||||||++|||++ |..||...
T Consensus 244 aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~ 280 (338)
T cd05102 244 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGV 280 (338)
T ss_pred CcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999999999997 99998753
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=298.85 Aligned_cols=201 Identities=25% Similarity=0.342 Sum_probs=171.9
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
++|++.++||+|+||.||+|.+. .++.||+|++...... ..+++.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999875 4889999998754322 2457889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhc----------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeecc
Q 047790 737 EYMVNGSLDDWLRNR----------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFG 806 (885)
Q Consensus 737 e~~~~~sL~~~l~~~----------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg 806 (885)
||++|++|.+++... ....+...+..++.|+++|++||| +.||+||||||+||+++.++.++++|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 999999999988631 122456778899999999999999 8999999999999999999999999999
Q ss_pred CcccccCCCC-----------------CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 807 LARLISDCES-----------------HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 807 ~a~~~~~~~~-----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.+........ .......||+.|+|||++.+..++.++||||+||++|||+||+.||..
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 9976521100 011123589999999999999999999999999999999999999975
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=298.23 Aligned_cols=206 Identities=33% Similarity=0.534 Sum_probs=178.1
Q ss_pred EEeecceecccCCceEEEEEeC------CCCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
..++.+.||+|+||+||+|+.. +...||||.++..... ...+|++|++.+..++||||+++++++..++..+|
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 4667899999999999999742 3566999999876544 56799999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcC-------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEE
Q 047790 735 VYEYMVNGSLDDWLRNRA-------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAK 801 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~-------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vk 801 (885)
|+|||..|+|.++++.+. ..++..+..+||.||+.++.||- ++.+||||+.++|.+|.++..||
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~VK 643 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVVK 643 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEEE
Confidence 999999999999997521 12778899999999999999999 89999999999999999999999
Q ss_pred EeeccCcccccCCCCCccc-CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCC
Q 047790 802 VSDFGLARLISDCESHVST-DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPEFEDKD 870 (885)
Q Consensus 802 l~Dfg~a~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~~~~~~ 870 (885)
|+|||+++.+-..+.+... ...-..+|||||.+..+++++++||||+||++||+++ |+.||.+...+|.
T Consensus 644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV 714 (774)
T KOG1026|consen 644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV 714 (774)
T ss_pred ecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH
Confidence 9999999876543322221 2334678999999999999999999999999999998 9999987766654
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=280.16 Aligned_cols=198 Identities=25% Similarity=0.320 Sum_probs=173.6
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
..+|++.+.||+|+||.||+|++. ++..+|+|.+.... .....++.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 357999999999999999999876 47888999886543 2234678999999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|+++++|.+++.... .+++..+..++.|++.++.||| ++ +|+||||||+||+++.++.++|+|||.+......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 999999999997543 4889999999999999999999 65 6999999999999999999999999998765432
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......++..|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 12234688999999999999999999999999999999999999964
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=274.24 Aligned_cols=193 Identities=25% Similarity=0.323 Sum_probs=166.6
Q ss_pred ecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCH
Q 047790 669 IGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSL 744 (885)
Q Consensus 669 lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL 744 (885)
||+|+||.||++.+. +++.||+|++...... ..+.+..|+++++.++||+|+++.+++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999865 5889999998754322 224567899999999999999999999999999999999999999
Q ss_pred HHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 745 DDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 745 ~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
...+.. ....+++..+..++.|++.|++||| +.+|+||||||+||++++++.++++|||.+..+.... .....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~-~~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ-SKTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC-ccccc
Confidence 887743 3345899999999999999999999 9999999999999999999999999999987664422 22233
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..++..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 200 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRAR 200 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 46889999999999999999999999999999999999999753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=263.57 Aligned_cols=204 Identities=26% Similarity=0.366 Sum_probs=172.4
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccc--ccccHHHHHHHHHHhcccCCCCccceeeeeEe-----
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQA--TGQCDREFAAEMETLDMVKHQNLVQLLGYCSV----- 728 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~----- 728 (885)
+.+...|...+.||+|+||.|..|.+. +|+.||+|++... .....++..+|+++++.++|+||+.+++++..
T Consensus 18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence 445556666899999999999999754 5899999998742 23356789999999999999999999999865
Q ss_pred CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 729 GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 729 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
-...|+|+|+| +.+|..+++. .+.++...++.+.+|++.|+.|+| +.+|+|||+||.|++++.+..+||+|||+|
T Consensus 98 f~DvYiV~elM-etDL~~iik~-~~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 98 FNDVYLVFELM-ETDLHQIIKS-QQDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred cceeEEehhHH-hhHHHHHHHc-CccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccce
Confidence 24689999999 6699999874 344999999999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCCCcc-cCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVS-TDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~-~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+.......... +....|.+|.|||++.. ..|+.+.||||+||+++||++|++.|.+.
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~ 231 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK 231 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC
Confidence 98754211112 34567999999997655 57999999999999999999999988654
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=280.04 Aligned_cols=194 Identities=27% Similarity=0.302 Sum_probs=163.8
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHH-HhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEME-TLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
++||+|+||.||+|++. +++.||+|++.+... ....++..|.. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999875 488899999865431 22334555554 57889999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|...+... ..+++..+..++.|+++|++||| +.||+||||||+||+++.++.+||+|||++....... .....
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 155 (321)
T cd05603 81 GELFFHLQRE-RCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETTST 155 (321)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Ccccc
Confidence 9999888743 45888999999999999999999 9999999999999999999999999999987532211 22233
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..+++.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 199 (321)
T cd05603 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (321)
T ss_pred ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC
Confidence 46899999999999999999999999999999999999999653
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-30 Score=279.16 Aligned_cols=194 Identities=21% Similarity=0.267 Sum_probs=166.9
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
++||+|+||.||+|... +++.||+|++.+... .....+..|+.+++++ +||+|+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999865 478899999976432 2234577899998888 599999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|...+... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....... .....
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 155 (327)
T cd05617 81 GDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DTTST 155 (327)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-Cceec
Confidence 9999888754 35899999999999999999999 9999999999999999999999999999987532211 12234
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..+++.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~ 199 (327)
T cd05617 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDII 199 (327)
T ss_pred ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCcc
Confidence 56899999999999999999999999999999999999999643
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=249.17 Aligned_cols=208 Identities=24% Similarity=0.256 Sum_probs=175.5
Q ss_pred eeeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeC-----C
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVG-----E 730 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~ 730 (885)
++-..+|+|.+++|+|||+.||.++. .+++.||+|++.....++.+...+|++..++++||||++++++...+ .
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 33457999999999999999999984 45888999999877766778899999999999999999999987543 3
Q ss_pred eeEEEEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEcCCCcEEEeec
Q 047790 731 EKLLVYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLNDYFEAKVSDF 805 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~~~~~vkl~Df 805 (885)
..|++++|...|+|.+.++. .+..+++.++..|+.++++|++++| ... +.||||||.||++++.+.+++.||
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH---~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALH---EKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHh---ccCCcccccCCCcceeEecCCCceEEEec
Confidence 48999999999999999875 3445999999999999999999999 777 999999999999999999999999
Q ss_pred cCcccccCCCC--------CcccCCCCCCccCCcccccC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 806 GLARLISDCES--------HVSTDTADTIGYVPSEYGQA---GRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 806 g~a~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
|.+....-.-. ..-.....|..|.|||.+.- +..+.++|||||||++|+|+.|.-||....+
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~ 246 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ 246 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh
Confidence 99876531100 01122347889999997664 4568999999999999999999999986554
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-31 Score=280.44 Aligned_cols=203 Identities=26% Similarity=0.454 Sum_probs=172.3
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+...+.++||+|.||.||+|+|.. .||||+++..... ..+.|++|+.++++-+|.||+-+++++..+.. .+|+.|
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqw 468 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQW 468 (678)
T ss_pred HHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehh
Confidence 345678999999999999999864 6899998755433 34679999999999999999999999987776 999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC-CCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD-CESH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~-~~~~ 817 (885)
|+|-+|..+++..+..++..+.+.||.|+++++.||| .++|+|||+|..||++.+++.|||+|||++..-.. ....
T Consensus 469 CeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~ 545 (678)
T KOG0193|consen 469 CEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQ 545 (678)
T ss_pred ccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeeeeeecccc
Confidence 9999999999977777999999999999999999999 99999999999999999999999999999864221 1112
Q ss_pred cccCCCCCCccCCcccccCC---CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAG---RANERGDIYSFGVILLELVTGKQPTGPEFEDK 869 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslGvvl~elltg~~P~~~~~~~~ 869 (885)
.....-+...|||||++.-+ +|+..+||||||+|+|||++|..||....++.
T Consensus 546 q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq 600 (678)
T KOG0193|consen 546 QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ 600 (678)
T ss_pred ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh
Confidence 22334467789999988764 57999999999999999999999998544443
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=282.16 Aligned_cols=194 Identities=26% Similarity=0.314 Sum_probs=168.9
Q ss_pred ceecccCCceEEEEEe----CCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 667 NVIGGGGFRTAFKGTM----PDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~----~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
+.||+|+||.||+++. .+++.||+|++.+... ....++..|++++++++||||+++++++..++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 6799999999999875 3578999999975432 233567789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
+++|.+++... ..+++..+..++.|+++|++||| +.+|+||||||+||+++.++.++|+|||.+....... ....
T Consensus 82 ~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~~ 156 (318)
T cd05582 82 GGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKAY 156 (318)
T ss_pred CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-Ccee
Confidence 99999998754 35899999999999999999999 9999999999999999999999999999987654321 2223
Q ss_pred CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 821 DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...++..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 201 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGK 201 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCC
Confidence 456899999999999989999999999999999999999999753
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-30 Score=268.22 Aligned_cols=200 Identities=29% Similarity=0.482 Sum_probs=174.0
Q ss_pred EEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
.|++.+.||+|+||.||+|+++++..+|+|.+.... ....++.+|+++++.++||||+++++++..++..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 478889999999999999999888889999886443 2356788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|.+++......+++..+..++.|++.|++|+| +.+++||||+|+||++++++.++++|||.+.............
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05114 84 GCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG 160 (256)
T ss_pred CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence 9999999765556899999999999999999999 9999999999999999999999999999987654322222222
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
..++..|+|||++.+..++.++|+||+|+++||+++ |+.||...
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~ 205 (256)
T cd05114 161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK 205 (256)
T ss_pred CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 335568999999998899999999999999999999 89998643
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=277.72 Aligned_cols=187 Identities=29% Similarity=0.469 Sum_probs=166.5
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCHHH
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDD 746 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~ 746 (885)
+=+|.|+.|.||.|+.+ ++.||||+++.-. +.+++=+++|+||||+.+.+++....-+|+|||||..|-|..
T Consensus 130 eWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~ 201 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE 201 (904)
T ss_pred hhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence 35899999999999874 5779999986533 346777899999999999999998888999999999999999
Q ss_pred HHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCC
Q 047790 747 WLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI 826 (885)
Q Consensus 747 ~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~ 826 (885)
+++.. ..+.......|..+|+.++.||| ...|||||+|.-||+++.+..|||+|||-++...+. .....++||.
T Consensus 202 VLka~-~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSFaGTV 275 (904)
T KOG4721|consen 202 VLKAG-RPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSFAGTV 275 (904)
T ss_pred HHhcc-CccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhhhhhH
Confidence 99854 45899999999999999999999 899999999999999999999999999999887653 3334568999
Q ss_pred ccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 827 GYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 827 ~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
.|||||++...+++.|.||||||||+|||+||..||.....
T Consensus 276 aWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds 316 (904)
T KOG4721|consen 276 AWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS 316 (904)
T ss_pred hhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch
Confidence 99999999999999999999999999999999999986543
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=301.04 Aligned_cols=203 Identities=24% Similarity=0.228 Sum_probs=183.9
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
.+-..+|+|.++||+|+||.|..++++. ++.||+|++++.. ..+...|..|-.+|--...+.|+.++-.|.++.+.
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 4556789999999999999999998765 8889999998743 33456788899999988899999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
|+||||++||+|...+.+.+ .+++.-++.++..+.-|+..+| +.|||||||||+||++|..|++|++|||.+-.+.
T Consensus 151 YlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred EEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhcC
Confidence 99999999999999998777 6999999999999999999999 9999999999999999999999999999999988
Q ss_pred CCCCCcccCCCCCCccCCcccccC-----CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQA-----GRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
..+...+....|||.|++||++.. +.|++.+|.||+||++|||+.|.-||.
T Consensus 227 ~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 227 ADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred CCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 777777888899999999998664 468899999999999999999999986
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-32 Score=279.79 Aligned_cols=203 Identities=22% Similarity=0.254 Sum_probs=182.1
Q ss_pred eeeeEEeecceecccCCceEEEEEeCCCCe-EEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPDQKT-VAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~-valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
+...+.++...||.|+||.|=.+.....+. +|+|++++.. ....++...|-+||...+.|+|+++|..|.+.++.|
T Consensus 417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY 496 (732)
T KOG0614|consen 417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY 496 (732)
T ss_pred cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence 344567778899999999999988765444 8888887654 334678889999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
|.||-|-||.++.++++++. ++..+.+.++..+++|++||| ++||++||+||+|.+++.+|.+|+.|||+|+.++.
T Consensus 497 mLmEaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 497 MLMEACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hhHHhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 99999999999999997654 999999999999999999999 99999999999999999999999999999999886
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.. .....+||+.|.|||++.+++.+.+.|.||+|+++||+++|.+||.+..
T Consensus 573 g~--KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~d 623 (732)
T KOG0614|consen 573 GR--KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVD 623 (732)
T ss_pred CC--ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCc
Confidence 43 4466799999999999999999999999999999999999999998653
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=279.84 Aligned_cols=194 Identities=27% Similarity=0.302 Sum_probs=164.2
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHH-HhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEME-TLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
+.||+|+||.||+|+.. +++.||+|++.+.. .....++..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999865 58899999986542 122344555554 46778999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|..++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+...... ......
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~ 155 (325)
T cd05604 81 GELFFHLQRE-RSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTTTT 155 (325)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCccc
Confidence 9999888754 45899999999999999999999 999999999999999999999999999998653221 112234
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..++..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~ 199 (325)
T cd05604 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR 199 (325)
T ss_pred ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC
Confidence 56899999999999999999999999999999999999999643
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-30 Score=273.50 Aligned_cols=198 Identities=27% Similarity=0.349 Sum_probs=171.9
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
|++.++||+|+||.||+|... +++.||+|++..... .....+.+|+++++.++||+|+++++.+..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 788899999999999999864 588999999865331 1234567899999999999999999999988999999999
Q ss_pred ccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 739 MVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
+++++|.+++... ...+++..+..++.|++.|++||| +.|++||||||+||++++++.++++|||.+..+....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-- 156 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC--
Confidence 9999999888643 345899999999999999999999 8999999999999999999999999999987754321
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++.+..++.++|+||+||++||+++|+.||...
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~ 204 (285)
T cd05605 157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQR 204 (285)
T ss_pred ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCC
Confidence 122346889999999999989999999999999999999999999753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-30 Score=278.78 Aligned_cols=193 Identities=24% Similarity=0.304 Sum_probs=162.8
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHH-HhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEME-TLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
+.||+|+||.||+|++. +++.||+|++.+... ....++..|.. +++.++||||+++++++..++..|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 47999999999999876 477899999875321 22234444444 46788999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|.+++... ..+.+..+..++.|+++|++||| +.||+||||||+||+++.++.++|+|||.+....... .....
T Consensus 81 ~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~~~~ 155 (325)
T cd05602 81 GELFYHLQRE-RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GTTST 155 (325)
T ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CCccc
Confidence 9999998754 34788889999999999999999 9999999999999999999999999999987543211 22234
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..+++.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 198 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCC
Confidence 5689999999999999999999999999999999999999964
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=279.82 Aligned_cols=198 Identities=24% Similarity=0.348 Sum_probs=166.9
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC-----CeeE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG-----EEKL 733 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 733 (885)
+|++.++||+|+||.||+|... +++.||+|++.... .....++.+|+++++.++||||+++++++... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4899999999999999999865 58899999986432 22345688999999999999999999987543 3579
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+ +++|.+++.... .+++..+..++.|+++|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 81 lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 81 VVFELM-ESDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEEecC-CCCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 999999 568999887543 4899999999999999999999 99999999999999999999999999999876432
Q ss_pred CCC--CcccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CES--HVSTDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... .......++..|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~ 210 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 210 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 111 11233468999999999876 6789999999999999999999999964
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-30 Score=270.94 Aligned_cols=201 Identities=26% Similarity=0.413 Sum_probs=171.1
Q ss_pred eEEeecceecccCCceEEEEEeC----CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..|++.+.||+|+||.||+|.+. .+..||+|.++.... .....+.+|+.++++++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46899999999999999999753 366899999876432 2235688999999999999999999999988999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|.+++......+++..+..++.|++.|++|+| +++++||||||+||+++.++.++++|||.+.......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 9999999999999876566899999999999999999999 9999999999999999999999999999876543221
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
........++..|+|||.+.+..++.++||||+||++||+++ |+.||..
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~ 211 (266)
T cd05064 162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWD 211 (266)
T ss_pred hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence 111122234578999999999999999999999999999775 9999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-31 Score=283.76 Aligned_cols=203 Identities=31% Similarity=0.433 Sum_probs=172.1
Q ss_pred eeEEeecceecccCCceEEEEEeCC--C--Ce-EEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD--Q--KT-VAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~--~--~~-valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
..+..+.++||+|+||.||+|+... + .. ||+|..+... .....++.+|++++++++||||+++||++..+..
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 3456677999999999999997543 2 23 8999887522 2345689999999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
+++|||+|.||+|.+++++....++..+...++.+.+.+++||| +.+++||||.++|++++.++.+||+|||+++.-
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 99999999999999999987767999999999999999999999 999999999999999999989999999997653
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPEF 866 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~~ 866 (885)
.... ......--...|+|||.+....++.++|||||||++||+++ |..||.+..
T Consensus 313 ~~~~-~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~ 367 (474)
T KOG0194|consen 313 SQYV-MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK 367 (474)
T ss_pred ccee-eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC
Confidence 2111 11111234578999999999999999999999999999999 888986543
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=266.88 Aligned_cols=201 Identities=29% Similarity=0.464 Sum_probs=173.4
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.+|++.+.||+|++|.||+|.+++++.+|+|++.+... ....+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 35889999999999999999988888899999865432 34578889999999999999999999998899999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
+++|.+++......+++..+..++.|++.+++||| +.|++|||+||+||++++++.+|++|||.++...........
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (256)
T cd05059 83 NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ 159 (256)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence 99999999865556899999999999999999999 999999999999999999999999999998765432222222
Q ss_pred CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 821 DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
....+..|+|||...+..++.++|+||+|+++||+++ |+.||...
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 205 (256)
T cd05059 160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERF 205 (256)
T ss_pred CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCC
Confidence 2233457999999999899999999999999999999 89998643
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=276.02 Aligned_cols=194 Identities=24% Similarity=0.319 Sum_probs=166.5
Q ss_pred ceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
+.||+|+||.||+|++.. ++.||+|++++.. ......+..|.++++.+ +||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 479999999999998764 7889999997543 22345567888888877 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|..++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||.+...... ......
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~ 155 (318)
T cd05570 81 GDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG-GVTTST 155 (318)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC-CCcccc
Confidence 9999988754 35899999999999999999999 999999999999999999999999999988653221 112233
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..++..|+|||++.+..++.++|+||+||++|+|++|+.||...
T Consensus 156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~ 199 (318)
T cd05570 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD 199 (318)
T ss_pred eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCC
Confidence 46889999999999999999999999999999999999999643
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=267.09 Aligned_cols=200 Identities=29% Similarity=0.469 Sum_probs=174.4
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.+|++.+.||+|++|.||.|++.++..+|+|.+.... .....+.+|++++++++||||+++++++..+...+++|||+.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4588999999999999999998877789999887543 235678999999999999999999999988888999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
+++|.+++......+++..++.++.|++.|++||| +.|++|+||||.||+++.++.+|++|||.+............
T Consensus 83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05113 83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSV 159 (256)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecC
Confidence 99999999765556899999999999999999999 999999999999999999999999999998766443222222
Q ss_pred CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 821 DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
...++..|+|||+..+..++.++|||||||++|+|++ |+.||..
T Consensus 160 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~ 204 (256)
T cd05113 160 GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYER 204 (256)
T ss_pred CCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence 2345678999999998889999999999999999998 9999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=279.04 Aligned_cols=192 Identities=29% Similarity=0.383 Sum_probs=170.1
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
|.-.+.||.|.||.||.|++. +...||||++.=...+ ...++..|++++++++|||++.+.++|..+...|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 555678999999999999864 5778999998633322 246899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
|- |+-.+++..+.+++.+..+..|+++.+++|+||| +.+.||||||+.||++++.|.||++|||.|..+.+
T Consensus 108 Cl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----- 178 (948)
T KOG0577|consen 108 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----- 178 (948)
T ss_pred Hh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCc-----
Confidence 95 5999999888888999999999999999999999 99999999999999999999999999999987654
Q ss_pred ccCCCCCCccCCcccccC---CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQA---GRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
...+.||++|||||++.. +.|+-++||||+|++..|+...++|+.
T Consensus 179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlF 226 (948)
T KOG0577|consen 179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 226 (948)
T ss_pred hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCcc
Confidence 234689999999998765 679999999999999999999999964
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-30 Score=275.65 Aligned_cols=202 Identities=25% Similarity=0.466 Sum_probs=168.2
Q ss_pred eeEEeecceecccCCceEEEEEeCC-----------------CCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-----------------QKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQ 721 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-----------------~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~ 721 (885)
.++|++.++||+|+||.||+|.+.+ +..||+|.+...... ...++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3579999999999999999997532 336999988754322 3457889999999999999999
Q ss_pred eeeeeEeCCeeEEEEecccCCCHHHHHhhcC------------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCce
Q 047790 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRA------------------ASLDWGKRCKIAYGAARGISFLHHGFKPYII 783 (885)
Q Consensus 722 ~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~ 783 (885)
+++++.+.+..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCcc
Confidence 9999998899999999999999999886421 23577788999999999999999 89999
Q ss_pred ecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh--CCC
Q 047790 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT--GKQ 860 (885)
Q Consensus 784 H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt--g~~ 860 (885)
||||||+||+++.++.+||+|||.+......... ......++..|+|||++.+..++.++||||||+++|||++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999998765432211 1222345678999999988899999999999999999987 556
Q ss_pred CCCC
Q 047790 861 PTGP 864 (885)
Q Consensus 861 P~~~ 864 (885)
||..
T Consensus 241 p~~~ 244 (304)
T cd05096 241 PYGE 244 (304)
T ss_pred CCCc
Confidence 7764
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=276.90 Aligned_cols=199 Identities=25% Similarity=0.332 Sum_probs=173.0
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
..+|++.++||+|+||.||+|.+. ++..+|+|.+..... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 357999999999999999999876 477888888765432 234578899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|+++++|.+++... ..+++..+..++.|++.+++||| + .+++||||||+||+++.++.+|++|||.+..+...
T Consensus 84 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-- 157 (333)
T cd06650 84 HMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (333)
T ss_pred cCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--
Confidence 99999999999754 34888999999999999999999 6 47999999999999999999999999998765332
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred -ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 122346888999999999989999999999999999999999999743
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=274.64 Aligned_cols=200 Identities=24% Similarity=0.383 Sum_probs=171.1
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..|++.++||+|+||.||+|+.. +++.||+|.+.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56999999999999999999875 47889999987543 22345677899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++ ++.+++......++...+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+........ .
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~ 160 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK-T 160 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc-c
Confidence 965 888888766666899999999999999999999 99999999999999999999999999999876543221 1
Q ss_pred ccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~ 208 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGS 208 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 223457889999998765 46789999999999999999999999654
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=280.37 Aligned_cols=195 Identities=29% Similarity=0.417 Sum_probs=165.1
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
...|++.++||+|+||.||+|++. +++.||+|++..... .....+.+|+++++.++|+||+++++++..++..++|||
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 456888899999999999999865 589999999865432 234578899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+.. ..++..+..++.|++.|++||| +.||+||||||+||++++++.+||+|||.+..+.... .
T Consensus 153 ~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~ 223 (353)
T PLN00034 153 FMDGGSLEGTH-----IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-D 223 (353)
T ss_pred cCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc-c
Confidence 99999986532 2567788899999999999999 9999999999999999999999999999987764321 1
Q ss_pred cccCCCCCCccCCcccccC-----CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQA-----GRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
......++..|+|||++.. ...+.++|||||||++|||++|+.||.
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 274 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG 274 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 2233568999999998743 234568999999999999999999997
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-29 Score=264.90 Aligned_cols=201 Identities=30% Similarity=0.474 Sum_probs=174.1
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
..|++.+.||+|++|.||+|...+++.||+|.+.... ...+.+.+|++++++++||||+++++++...+..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence 5689999999999999999998788889999987543 235678899999999999999999999999899999999999
Q ss_pred CCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 741 NGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 741 ~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+++|.+++.... ..+++..+..++.|++.|++++| +.||+||||||+||+++.++.++++|||.+..+........
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05068 85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAR 161 (261)
T ss_pred CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccccc
Confidence 999999997543 45899999999999999999999 89999999999999999999999999999987653221111
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.....+..|+|||+..+..++.++|+||||+++|||++ |+.||...
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 208 (261)
T cd05068 162 EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGM 208 (261)
T ss_pred CCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 22223457999999999999999999999999999999 99998653
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=265.78 Aligned_cols=201 Identities=32% Similarity=0.493 Sum_probs=172.0
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.++|++.++||+|++|.||+|.+.+...||+|++..... ...++.+|++++++++||+|+++++++. +...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence 357999999999999999999887777899999875432 3467889999999999999999999875 45678999999
Q ss_pred cCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++|.+++... ...+++..+..++.|+++|++|+| +.+++||||||+||++++++.++|+|||.+..+.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 999999999753 344788999999999999999999 9999999999999999999999999999997765433222
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.....++..|+|||+..+..++.++|+||+|+++||+++ |+.||...
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~ 207 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 207 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 223345678999999998899999999999999999999 88888643
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=272.31 Aligned_cols=199 Identities=26% Similarity=0.345 Sum_probs=165.7
Q ss_pred EEeecceecccCCceEEEEEeC--CCCeEEEEEeccccc--ccHHHHHHHHHHhccc---CCCCccceeeeeEe-----C
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP--DQKTVAVKKLSQATG--QCDREFAAEMETLDMV---KHQNLVQLLGYCSV-----G 729 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~--~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l---~~~~i~~~~~~~~~-----~ 729 (885)
+|++.+.||+|+||.||+|++. +++.||+|++..... .....+.+|+++++.+ .||||+++++++.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 6899999999999999999863 367899998864332 2234566777777665 69999999998752 3
Q ss_pred CeeEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
...++||||+. +++.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+|++|||.+
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccce
Confidence 56899999995 5899988753 344889999999999999999999 999999999999999999999999999998
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
...... .......++..|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 158 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 213 (290)
T cd07862 158 RIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 213 (290)
T ss_pred EeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCC
Confidence 765432 22334568899999999998899999999999999999999999997643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=281.10 Aligned_cols=198 Identities=24% Similarity=0.248 Sum_probs=169.9
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
......|.+.+.||+|+||.||+|.+.. ++.||+|... ...+.+|++++++++||||+++++++..++..++|
T Consensus 165 ~~~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 165 VVAGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred ccccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 3345579999999999999999998765 7789999632 23456899999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
||++ .+++.+++......+++..+..++.|++.+++||| +.||+||||||+||+++..+.++|+|||+++......
T Consensus 239 ~e~~-~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 239 LPKY-RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred EEcc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 9999 46898888765566999999999999999999999 9999999999999999999999999999987654322
Q ss_pred CC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. ......||..|+|||++.+..++.++|||||||++|||++|..|+..
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~ 364 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFS 364 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCccc
Confidence 11 22234689999999999999999999999999999999999876543
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-29 Score=281.12 Aligned_cols=198 Identities=20% Similarity=0.218 Sum_probs=170.6
Q ss_pred eeEEeecceecccCCceEEEEEeC---CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP---DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~---~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.+.||+|+||.||+|... .++.||+|.+... ....+|++++++++||||+++++++..+...++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 357999999999999999999753 3577889987543 23468999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|++. +++.+++.. ...+++..+..++.|++.|++||| +.||+||||||+||+++..+.++|+|||++........
T Consensus 166 e~~~-~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 166 PKYK-CDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred hhcC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 9995 688888853 445899999999999999999999 99999999999999999999999999999877654322
Q ss_pred -CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 817 -HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 817 -~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
.......+|..|+|||++.+..++.++||||+||++|||++|+.||.+...
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~ 292 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQV 292 (392)
T ss_pred cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCC
Confidence 222345689999999999999999999999999999999999999976543
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=285.24 Aligned_cols=197 Identities=21% Similarity=0.311 Sum_probs=162.5
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeC--------C
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVG--------E 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--------~ 730 (885)
...|++.++||+|+||.||+|... .++.||+|++.... ....+|+.+++.++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 357999999999999999999875 48899999885432 3345799999999999999999876432 2
Q ss_pred eeEEEEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-cEEEeecc
Q 047790 731 EKLLVYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-EAKVSDFG 806 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-~vkl~Dfg 806 (885)
..++||||+++ ++.+++.. ....+++..++.++.|++.|++||| +.+|+||||||+||+++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 46799999964 77776642 3455899999999999999999999 99999999999999998654 69999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
+|+.+..... .....+++.|+|||++.+. .++.++||||+||++|||++|++||.+..
T Consensus 217 la~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 275 (440)
T PTZ00036 217 SAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS 275 (440)
T ss_pred cchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9987653222 2234678999999987764 68999999999999999999999997543
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-29 Score=268.32 Aligned_cols=200 Identities=26% Similarity=0.366 Sum_probs=175.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|++|.||+|... +++.|++|.+..........+.+|+++++.+.||||+++++.+..+.+.++||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 357999999999999999999864 5889999998765545567788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+.........
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~- 172 (296)
T cd06654 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 172 (296)
T ss_pred cCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccccc-
Confidence 9999999998643 3788999999999999999999 999999999999999999999999999988765432211
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||...+..++.++|||||||++|+|++|+.||...
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~ 219 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 219 (296)
T ss_pred cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 22346788999999999888999999999999999999999999643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=266.89 Aligned_cols=192 Identities=27% Similarity=0.322 Sum_probs=165.2
Q ss_pred ecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCH
Q 047790 669 IGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSL 744 (885)
Q Consensus 669 lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL 744 (885)
||+|+||.||+++.+ +++.||+|++..... .....+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999865 489999999864321 1234456799999999999999999999999999999999999999
Q ss_pred HHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCC
Q 047790 745 DDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA 823 (885)
Q Consensus 745 ~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~ 823 (885)
.+++... ...+++..+..++.|++.|++|+| +.||+||||||+||+++.++.++|+|||.+....... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQRA 155 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeeccC
Confidence 9887643 334888899999999999999999 9999999999999999999999999999987765322 223346
Q ss_pred CCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 824 DTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 824 ~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
++..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~ 197 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDH 197 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Confidence 888999999999988999999999999999999999999753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-30 Score=270.11 Aligned_cols=193 Identities=25% Similarity=0.385 Sum_probs=173.1
Q ss_pred cceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCC
Q 047790 666 ENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
+++||.|-||.||-|.++ .|+.||+|++.+.. +.....+.+|++|++++.||.|+.+.--|+..+..++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 789999999999999865 59999999998654 344577999999999999999999999999999999999999776
Q ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc---CCCcEEEeeccCcccccCCCCCcc
Q 047790 743 SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN---DYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 743 sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~---~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
=|+.++....+++++...+.+..||+.|++||| .++|+|+|+||+||++. .--.+|++|||+|+.++. +...
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE--ksFR 723 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE--KSFR 723 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecch--hhhh
Confidence 777777777778999999999999999999999 89999999999999996 345799999999999875 3344
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
....||+.|.|||++..++|...-|+||+||++|--++|..||+
T Consensus 724 rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFN 767 (888)
T KOG4236|consen 724 RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFN 767 (888)
T ss_pred hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCC
Confidence 55789999999999999999999999999999999999999997
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=284.18 Aligned_cols=223 Identities=26% Similarity=0.346 Sum_probs=180.5
Q ss_pred eEEeecceecccCCceEEEEEeCCC-CeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceee-eeEe------CCe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQ-KTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLG-YCSV------GEE 731 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~-~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~-~~~~------~~~ 731 (885)
.+++|++.|.+|||+.||.|+...+ ..||+|++........+.+.+|+++|++|+ |||||.+++ .... .-+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 5788999999999999999987765 999999997766666778999999999998 999999999 3322 135
Q ss_pred eEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.++.||||+||.|.+++..+ ...+++..+.+|+.++++|+++||.. +..|||||||.||||++.++..||||||.|.-
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 67999999999999999853 23399999999999999999999933 44599999999999999999999999998764
Q ss_pred ccCCC-CC-------cccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCCC-----------CC-
Q 047790 811 ISDCE-SH-------VSTDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGPE-----------FE- 867 (885)
Q Consensus 811 ~~~~~-~~-------~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~~-----------~~- 867 (885)
.-... .. ..-....|+.|.|||++. +...+.|+|||||||++|-++....||... ++
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~~P~ 275 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYSFPP 275 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccccCCC
Confidence 32111 11 112234789999999755 557899999999999999999999999854 11
Q ss_pred -CCCCCCHHHHHHHHHhc
Q 047790 868 -DKDGGNLVDWVLLMMKK 884 (885)
Q Consensus 868 -~~~~~~l~~~~~~~~~~ 884 (885)
+.....+.+.|+.|+..
T Consensus 276 ~p~ys~~l~~LI~~mL~~ 293 (738)
T KOG1989|consen 276 FPNYSDRLKDLIRTMLQP 293 (738)
T ss_pred CccHHHHHHHHHHHHhcc
Confidence 23456677788877753
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=281.90 Aligned_cols=198 Identities=29% Similarity=0.345 Sum_probs=168.7
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCC-----eeEE
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE-----EKLL 734 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-----~~~l 734 (885)
|++.+.||+|+||.||+|... +++.||+|++.... .....++.+|+++++.++||||+++++++.... ..|+
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 678999999999999999864 68999999986532 223457889999999999999999999987765 7899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+. +++.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 82 v~e~~~-~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 82 VTELMQ-SDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred Eeeccc-cCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 999995 5888877643 45899999999999999999999 999999999999999999999999999998765443
Q ss_pred CCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.........++..|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 208 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQ 208 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCC
Confidence 33333344678899999998874 4789999999999999999999999754
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-29 Score=261.90 Aligned_cols=199 Identities=24% Similarity=0.332 Sum_probs=172.0
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc-----cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ-----CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
.|++.+.||+|++|.||+|... +++.+|+|.+...... ....+.+|++++++++||||+++++++..+...++|
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 82 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF 82 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence 5889999999999999999864 5889999988643211 234688899999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
+||+++++|.+++... ..+++..+..++.|++.|+++|| +.|++||||+|+||++++++.++|+|||.+.......
T Consensus 83 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 83 MEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 158 (263)
T ss_pred EEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence 9999999999998754 34888999999999999999999 9999999999999999999999999999987654322
Q ss_pred CCcc--cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SHVS--TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.... ....++..|+|||+..+..++.++||||+|+++||+++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 209 (263)
T cd06625 159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAE 209 (263)
T ss_pred cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence 1111 234577899999999999999999999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=264.73 Aligned_cols=200 Identities=31% Similarity=0.510 Sum_probs=176.7
Q ss_pred EEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
.|++.++||.|++|.||+|...+++.+|+|.+..........+..|+++++.++||||+++++++......++||||+++
T Consensus 7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (261)
T cd05148 7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEK 86 (261)
T ss_pred HHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeeccc
Confidence 58899999999999999999888999999999876655567899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 742 GSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 742 ~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
++|.+++... ...+++..+..++.|++.|++||| +.|++|+||+|+||++++++.++++|||.+....... ....
T Consensus 87 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~-~~~~ 162 (261)
T cd05148 87 GSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV-YLSS 162 (261)
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcc-cccc
Confidence 9999999753 345899999999999999999999 9999999999999999999999999999987765422 1122
Q ss_pred CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 821 DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
...++..|+|||+..+..++.++|+||||+++|++++ |+.||...
T Consensus 163 ~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~ 208 (261)
T cd05148 163 DKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGM 208 (261)
T ss_pred CCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcC
Confidence 3345678999999998899999999999999999998 89998653
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-29 Score=267.25 Aligned_cols=202 Identities=21% Similarity=0.287 Sum_probs=174.4
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
....|++.++||+|+||.||+|...+ ++.+++|.+.........++.+|+++++.++||||+++++.+..+...++|||
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 44669999999999999999998765 88899999876555556678899999999999999999999998999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|++++++..++......+++..+..++.|++.+++||| +.+++|||+||+||+++.++.++|+|||.+...... ..
T Consensus 90 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-~~ 165 (292)
T cd06644 90 FCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-LQ 165 (292)
T ss_pred cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccc-cc
Confidence 99999999888765566899999999999999999999 899999999999999999999999999988764331 11
Q ss_pred cccCCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......++..|+|||++. ...++.++|+||+||++|||++|+.||..
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 217 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 217 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcc
Confidence 122345788999999875 34568899999999999999999999864
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-30 Score=250.50 Aligned_cols=198 Identities=24% Similarity=0.369 Sum_probs=167.8
Q ss_pred cceecccCCceEEEEE-eCCCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEEecccCCC
Q 047790 666 ENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVYEYMVNGS 743 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~-~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~s 743 (885)
.+.||+|+++.|--+. ...++.||||++.+...-...+..+|++++.+.+ |+||++++++|+++...|+|||-|.||.
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGp 162 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGP 162 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCch
Confidence 5789999999998875 4569999999998876556778999999999997 9999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC---cEEEeeccCccccc--CC----
Q 047790 744 LDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF---EAKVSDFGLARLIS--DC---- 814 (885)
Q Consensus 744 L~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~---~vkl~Dfg~a~~~~--~~---- 814 (885)
+.+.|+++.. +++..+.++...|+.||.+|| .+||.|||+||+||+-.... -|||+||.++.-+. .+
T Consensus 163 lLshI~~~~~-F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa 238 (463)
T KOG0607|consen 163 LLSHIQKRKH-FNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA 238 (463)
T ss_pred HHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCC
Confidence 9999987654 899999999999999999999 99999999999999996443 48999998765432 11
Q ss_pred CCCcccCCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
....-....|...|||||+.. ...|+.++|.||+|||+|-|++|++||.+.=.
T Consensus 239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg 296 (463)
T KOG0607|consen 239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCG 296 (463)
T ss_pred CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccC
Confidence 111223346788899999643 24689999999999999999999999987543
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-29 Score=262.69 Aligned_cols=201 Identities=29% Similarity=0.518 Sum_probs=172.6
Q ss_pred eEEeecceecccCCceEEEEEeCC----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
.+|++.+.||+|+||.||+|.++. ...||+|.++.... ....++.+|+.++++++||||+++++++...+..+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 468899999999999999998743 45789998865432 2345788999999999999999999999988999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|.+++......+++..+..++.|++.+++||| +.+|+||||||+||++++++.++++|||.++......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 9999999999999876667899999999999999999999 9999999999999999999999999999998775222
Q ss_pred C-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 816 S-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 816 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
. .......++..|+|||...+..++.++||||+|+++|++++ |..||..
T Consensus 161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~ 211 (266)
T cd05033 161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWD 211 (266)
T ss_pred cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCC
Confidence 1 12222334568999999999999999999999999999998 9999853
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=277.80 Aligned_cols=202 Identities=30% Similarity=0.465 Sum_probs=168.8
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
.+|++.+.||+|+||.||+|.+. +++.||+|++..... .....+.+|+++++.+ +||||+++++++...+..
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 46999999999999999998742 245799999875432 2345688999999999 899999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcC------------------------------------------------------------
Q 047790 733 LLVYEYMVNGSLDDWLRNRA------------------------------------------------------------ 752 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~------------------------------------------------------------ 752 (885)
++||||+++|+|.+++....
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 99999999999999886421
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC-cccCC
Q 047790 753 ---------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH-VSTDT 822 (885)
Q Consensus 753 ---------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~ 822 (885)
..+++..+..++.|+++|++||| ++||+||||||+||++++++.++|+|||+++.+...... .....
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 23677889999999999999999 999999999999999999999999999998765432211 11122
Q ss_pred CCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 823 ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 823 ~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.++..|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~ 318 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGI 318 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccc
Confidence 34567999999999999999999999999999997 99998643
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-29 Score=264.85 Aligned_cols=201 Identities=29% Similarity=0.476 Sum_probs=174.1
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++.++||+|++|.||+|...++..||+|.+.... ...+.+.+|+.++++++||||+++++++..+...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 35689999999999999999998888889999876543 23567889999999999999999999999888999999999
Q ss_pred cCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++|.+++... ....+...+..++.|++.|++||| +.+++||||||+||++++++.++++|||.+..........
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence 999999998753 345788899999999999999999 8999999999999999999999999999998765422222
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.....++..|+|||+..+..++.++|+||+||++|+|++ |+.||..
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~ 207 (261)
T cd05072 161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPG 207 (261)
T ss_pred cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCC
Confidence 222345678999999998889999999999999999998 9999853
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-29 Score=267.49 Aligned_cols=199 Identities=26% Similarity=0.368 Sum_probs=175.7
Q ss_pred eEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.+|++.++||+|++|.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 5799999999999999999986 468999999987655445567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+++++.+++... .+++..+..++.|++.++.||| +.|++||||||+||+++.++.++++|||.+....... ...
T Consensus 99 ~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~ 172 (297)
T cd06656 99 AGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKR 172 (297)
T ss_pred CCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc-cCc
Confidence 999999998653 3788999999999999999999 8999999999999999999999999999987654422 222
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....++..|+|||...+..++.++|+||+||++|++++|+.||...
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~ 218 (297)
T cd06656 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE 218 (297)
T ss_pred CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3346788999999999988999999999999999999999999653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-29 Score=278.69 Aligned_cols=201 Identities=30% Similarity=0.475 Sum_probs=169.0
Q ss_pred eEEeecceecccCCceEEEEEe------CCCCeEEEEEecccc-cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQAT-GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
.+|++.++||+|+||.||+|.+ ..+..||+|+++... ....+.+.+|+++++.+ +||||+++++++...+..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 3699999999999999999963 236689999986543 23345788999999999 799999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcC------------------------------------------------------------
Q 047790 733 LLVYEYMVNGSLDDWLRNRA------------------------------------------------------------ 752 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~------------------------------------------------------------ 752 (885)
++||||+++|+|.+++....
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 99999999999999886421
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 753 --------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 753 --------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+|++|||++..........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 271 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV 271 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCccccc
Confidence 13678889999999999999999 8999999999999999999999999999987664322111
Q ss_pred -ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 819 -STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 819 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.....++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 272 ~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~ 319 (375)
T cd05104 272 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPG 319 (375)
T ss_pred ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCC
Confidence 112234567999999999999999999999999999998 8889864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-29 Score=267.65 Aligned_cols=190 Identities=20% Similarity=0.328 Sum_probs=164.8
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEeccccccc---HHHHHHHHHHhcccCCCCccceeeeeEe----CCeeEEEEecc
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQC---DREFAAEMETLDMVKHQNLVQLLGYCSV----GEEKLLVYEYM 739 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~----~~~~~lv~e~~ 739 (885)
..+|+|+++.||+|.+ +|+.||+|++....... .+.+.+|++++++++||||+++++++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5789999999999987 68899999997654333 3567899999999999999999999876 34678999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++|+|.+++... ..+++.....++.+++.+++|+| + .+++||||||+||++++++.+|++|||++.......
T Consensus 105 ~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~--- 177 (283)
T PHA02988 105 TRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP--- 177 (283)
T ss_pred CCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---
Confidence 999999999854 45889999999999999999999 6 489999999999999999999999999987654321
Q ss_pred ccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~ 225 (283)
T PHA02988 178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL 225 (283)
T ss_pred -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC
Confidence 23457889999999876 67899999999999999999999999754
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=272.62 Aligned_cols=204 Identities=23% Similarity=0.353 Sum_probs=181.8
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
...++.|.+.++||+|.|+.|..|++. .+..||+|.+.+..-. ....+.+|+++|+.++||||++++.+...+...|
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 445677999999999999999999875 4889999999875533 2345889999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||..+|.+.+++.+++. ..+..+..++.|+.+|++||| ++.|+|||+|++|++++.+.++||+|||++..+..
T Consensus 132 lV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeecc
Confidence 99999999999999997766 445889999999999999999 99999999999999999999999999999988763
Q ss_pred CCCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.......+|++.|+|||++.+.+| ++.+|+|++|+++|-++.|..||++..
T Consensus 208 --~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~ 259 (596)
T KOG0586|consen 208 --GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN 259 (596)
T ss_pred --cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc
Confidence 334456789999999999999887 688999999999999999999998653
|
|
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-29 Score=261.60 Aligned_cols=200 Identities=34% Similarity=0.533 Sum_probs=174.3
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.+|++.++||+|++|.||+|...+++.+|+|.+.... ....++.+|+.++++++||+|+++++++..+...+++|||++
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 5699999999999999999998888889999987543 235678999999999999999999999998889999999999
Q ss_pred CCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 741 NGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 741 ~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+++|.+++.... ..+++..+..++.+++.|++|+| +.+++|+||+|+||+++.++.++++|||.+...........
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR 161 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhh
Confidence 999999997643 45899999999999999999999 89999999999999999999999999999877653221222
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.....+..|+|||...+..++.++|+||+|+++|++++ |+.||..
T Consensus 162 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 207 (261)
T cd05034 162 EGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPG 207 (261)
T ss_pred hccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 22234568999999998899999999999999999998 9999854
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-30 Score=254.97 Aligned_cols=203 Identities=21% Similarity=0.233 Sum_probs=177.9
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
.+.-.+|.+.++||+|.||+|-.++.+ .++.+|+|+++++..- ...+-..|-++++..+||+...+.-.|..+++.
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 345567999999999999999999765 5899999999887532 334667899999999999999999899999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
|.||||..||.|.-.+.+ ...++++..+.+...|..|+.||| +++||+||+|-+|.++|++|++||+|||+++.--
T Consensus 244 CFVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhcc
Confidence 999999999999877764 445899999999999999999999 9999999999999999999999999999987633
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. .......+||+.|.|||++....|..+.|.|.+||+||||+.|+.||..
T Consensus 320 ~~-g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn 370 (516)
T KOG0690|consen 320 KY-GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN 370 (516)
T ss_pred cc-cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc
Confidence 22 2233457899999999999999999999999999999999999999863
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=275.73 Aligned_cols=199 Identities=30% Similarity=0.300 Sum_probs=168.8
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCC----
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE---- 730 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~---- 730 (885)
.+..+|++.+.||+|+||.||+|.+. .++.||+|++.... .....++.+|+.+++.++||||+++++++..++
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 45688999999999999999999865 48899999986542 223456788999999999999999999886443
Q ss_pred --eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 731 --EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 731 --~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
..|+||||+++ ++.+.+.. .++...+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 46899999965 67666642 3788899999999999999999 999999999999999999999999999998
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..... ........++..|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 171 ~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 171 RTACT--NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred ccccc--CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 76432 12223456789999999999999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=266.74 Aligned_cols=198 Identities=25% Similarity=0.325 Sum_probs=171.1
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
|+..+.||+|+||.||+|.+. +++.+|+|.+...... ....+.+|++++++++|++|+++++++..++..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999865 5889999998654322 234567899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 739 MVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
+++++|.+.+... ...+++..+..++.|++.++.|+| +.||+||||||+||++++++.++++|||.+.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-- 156 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence 9999999887643 335899999999999999999999 9999999999999999999999999999987654321
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++.+..++.++|+||+||++||+++|+.||...
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~ 204 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGR 204 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 123346889999999999999999999999999999999999999753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=261.05 Aligned_cols=200 Identities=30% Similarity=0.459 Sum_probs=171.7
Q ss_pred eEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|.+.+.||+|++|.||+|.+.+ ++.||+|++.... .....+.+|++++++++||+|+++++++..+...+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 458889999999999999998654 8889999886543 23467889999999999999999999999889999999999
Q ss_pred cCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++|.+++... ...+++..++.++.|++++++||| +.|++||||||+||++++++.++++|||.+..........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~ 161 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 161 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence 999999998753 345889999999999999999999 8999999999999999999999999999987765432222
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
......+..|+|||.+.+..++.++|||||||++|||++ |..||..
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 208 (263)
T cd05052 162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 208 (263)
T ss_pred cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 222234567999999999999999999999999999998 8899854
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-30 Score=275.90 Aligned_cols=200 Identities=26% Similarity=0.393 Sum_probs=177.0
Q ss_pred eeEEeecc-----eecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 660 IAIIVFEN-----VIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 660 ~~~~~~~~-----~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
-..|+..+ ++|+|.||.||.|++.+ +..+|+|.+........+-++.|+..-+.++|+||+++.+.+.++++.-
T Consensus 569 efeYeyde~~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~k 648 (1226)
T KOG4279|consen 569 EFEYEYDESNERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFK 648 (1226)
T ss_pred EEEeeecCCCceEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEE
Confidence 33455544 79999999999999766 6679999998776666778999999999999999999999999989889
Q ss_pred EEEecccCCCHHHHHhhcCCCC--CHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-CCCcEEEeeccCccc
Q 047790 734 LVYEYMVNGSLDDWLRNRAASL--DWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARL 810 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~--~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-~~~~vkl~Dfg~a~~ 810 (885)
+.||.++||+|.+.++...+++ .+.++-.+.+||++++.||| ...|||||||.+|+++. -.|.+||.|||-+++
T Consensus 649 IFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKR 725 (1226)
T KOG4279|consen 649 IFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKR 725 (1226)
T ss_pred EEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchh
Confidence 9999999999999999887777 88899999999999999999 99999999999999996 678999999999988
Q ss_pred ccCCCCCcccCCCCCCccCCcccccCC--CCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQAG--RANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
... -........||..|||||++..+ +|..++|||||||++.||.||++||.
T Consensus 726 LAg-inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ 779 (1226)
T KOG4279|consen 726 LAG-INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFV 779 (1226)
T ss_pred hcc-CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCee
Confidence 653 33445566799999999998874 68999999999999999999999986
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=277.61 Aligned_cols=192 Identities=23% Similarity=0.248 Sum_probs=161.0
Q ss_pred ecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhccc---CCCCccceeeeeEeCCeeEEEEecccC
Q 047790 669 IGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMV---KHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 669 lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l---~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
||+|+||.||+|+.. +++.||+|++.+... ....+...|..++... .||+|+++++++..+...|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999875 488999999865321 1223445566666655 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|.+++... ..+++..+..++.|+++|++||| +.||+||||||+||+++.++.++|+|||++....... .....
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~~ 155 (330)
T cd05586 81 GELFWHLQKE-GRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTNT 155 (330)
T ss_pred ChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCccC
Confidence 9999988754 45899999999999999999999 9999999999999999999999999999987643321 22234
Q ss_pred CCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..++..|+|||++.+. .++.++||||+||++|+|++|+.||...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~ 200 (330)
T cd05586 156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE 200 (330)
T ss_pred ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC
Confidence 5689999999998764 5789999999999999999999998653
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=260.42 Aligned_cols=200 Identities=31% Similarity=0.502 Sum_probs=172.5
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
..|++.++||+|+||.||+|..++++.||+|.+..... ...++.+|+.++++++||||+++++++. ++..+++|||+.
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME 83 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence 46899999999999999999988999999999876543 3567889999999999999999999874 467899999999
Q ss_pred CCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 741 NGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 741 ~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+++|.+++.. ....+++..+..++.|++.|++||| +.|++||||||+||+++.++.++++|||.+...........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05067 84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc
Confidence 9999998864 3345889999999999999999999 99999999999999999999999999999877653222222
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
....++..|+|||++.+..++.++|+||||+++||+++ |+.||...
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 207 (260)
T cd05067 161 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGM 207 (260)
T ss_pred cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 22345678999999999899999999999999999999 99999643
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-29 Score=261.17 Aligned_cols=200 Identities=33% Similarity=0.514 Sum_probs=171.7
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++.++||+|++|.||+|...++..+|+|.+..... ..+.+.+|+.++++++||+++++++++. +...+++|||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 357899999999999999999988888899999876443 3567899999999999999999999875 45678999999
Q ss_pred cCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++|.+++... ...+++..++.++.|++.|++||| +.+++||||||+||++++++.++++|||.+..+.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence 999999998753 344899999999999999999999 8999999999999999999999999999997764422222
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.....++..|+|||+..+..++.++|+||||+++|++++ |+.||..
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~ 206 (260)
T cd05070 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 206 (260)
T ss_pred ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 222334567999999988889999999999999999999 8899864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=263.84 Aligned_cols=199 Identities=26% Similarity=0.380 Sum_probs=175.6
Q ss_pred eEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.+|++.+.||.|++|.||+|.. .+++.|++|.+..........+.+|+++++.++|||++++++++......++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 5699999999999999999976 468899999987655455677889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++... .+++..+..++.|++.+++||| +.|++||||+|+||+++.++.++++|||.+........ ..
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~ 172 (296)
T cd06655 99 AGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-KR 172 (296)
T ss_pred CCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc-cC
Confidence 999999988743 4899999999999999999999 99999999999999999999999999998876543222 22
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....++..|+|||.+.+..++.++|+|||||++|++++|+.||...
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~ 218 (296)
T cd06655 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE 218 (296)
T ss_pred CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2346788999999999988999999999999999999999999754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.2e-29 Score=265.13 Aligned_cols=198 Identities=25% Similarity=0.334 Sum_probs=171.2
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
|++.+.||+|+||.||+|.+. +++.||+|.+...... ....+.+|+.++++++|++|+++++.+.+++..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 677889999999999999865 5889999998654322 234567899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 739 MVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
+++++|.+++... ...+++..+..++.|++.|+.|+| +.+|+||||||+||++++++.++++|||.+.......
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 9999999988643 335889999999999999999999 9999999999999999999999999999987654322
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++.+..++.++|+||+||++|+|++|+.||...
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~ 204 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 204 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCC
Confidence 122346889999999999999999999999999999999999999753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-29 Score=284.40 Aligned_cols=203 Identities=23% Similarity=0.272 Sum_probs=172.5
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCC-----
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE----- 730 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----- 730 (885)
...+|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+.++..++|++++++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 3468999999999999999999764 58999999986543 223456788999999999999999988765332
Q ss_pred ---eeEEEEecccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEee
Q 047790 731 ---EKLLVYEYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSD 804 (885)
Q Consensus 731 ---~~~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~D 804 (885)
..++||||+++|+|.+++..+ ...+++..+..++.|++.+++|+| +.+|+||||||+||+++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEEe
Confidence 367999999999999988642 345889999999999999999999 99999999999999999999999999
Q ss_pred ccCcccccCCC-CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 805 FGLARLISDCE-SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 805 fg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
||+++.+.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~ 247 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG 247 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 99998765322 1122345689999999999999999999999999999999999999964
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.2e-29 Score=262.78 Aligned_cols=199 Identities=25% Similarity=0.304 Sum_probs=171.5
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.+|++.+.||+|+||.||+|+.. +++.||+|++..........+.+|+.++++++||+|+++++++..+...++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 46999999999999999999864 58889999987554444567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++... ..+++..+..++.|++.+++||| +.+|+|||++|+||+++.++.++++|||.+....... ...
T Consensus 89 ~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~~~ 163 (267)
T cd06646 89 GGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI-AKR 163 (267)
T ss_pred CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecccc-ccc
Confidence 999999988754 35899999999999999999999 8999999999999999999999999999988764321 112
Q ss_pred cCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....++..|+|||.+. ...++.++|+||+||++|||++|+.||..
T Consensus 164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~ 211 (267)
T cd06646 164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFD 211 (267)
T ss_pred CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccc
Confidence 2345788999999875 34578899999999999999999999853
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=258.94 Aligned_cols=200 Identities=27% Similarity=0.493 Sum_probs=173.6
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
..|++.+.||+|++|.||+|.+.+++.+|+|++..... ....+.+|++++++++||+++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 46888999999999999999887788999998865432 34678899999999999999999999998899999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
+++|.+++......+++..+..++.|++.++++|| +.+++|+|+||+||+++.++.++++|||.+............
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05112 83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence 99999999865556889999999999999999999 899999999999999999999999999998765432211122
Q ss_pred CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 821 DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....+..|+|||+..+..++.++||||+|+++||+++ |+.||..
T Consensus 160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~ 204 (256)
T cd05112 160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYEN 204 (256)
T ss_pred CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCc
Confidence 2334568999999998899999999999999999998 9999864
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-29 Score=268.68 Aligned_cols=202 Identities=24% Similarity=0.373 Sum_probs=172.6
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
-..+|++.++||+|+||.||+|++. +++.||+|.+.... ......+.+|+++++.++||||+++++++..+...++||
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 3567999999999999999999875 47889999986443 233456788999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||++ +++.+++......+++..+..++.|+++|++||| +.+++|+||||+||+++.++.++++|||.+........
T Consensus 84 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 84 EYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 9996 5999988866666899999999999999999999 99999999999999999999999999999876543221
Q ss_pred CcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++.+. .++.++||||+||++|+|++|+.||...
T Consensus 160 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~ 208 (301)
T cd07873 160 -TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGS 208 (301)
T ss_pred -cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 12234568899999987664 5788999999999999999999999754
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-29 Score=265.42 Aligned_cols=201 Identities=22% Similarity=0.291 Sum_probs=174.5
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.+|++.+.||+|++|.||+|.+. +++.+|+|.+..........+.+|++++++++||+|+++++++..+...++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 45899999999999999999875 58889999987655445567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++......+++..++.++.|++.+++|+| +.+|+|+|++|+||+++.++.++++|||.+........ ..
T Consensus 85 ~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~ 160 (280)
T cd06611 85 DGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ-KR 160 (280)
T ss_pred CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhccccc-cc
Confidence 999999999876667999999999999999999999 99999999999999999999999999998876543221 22
Q ss_pred cCCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....++..|+|||++. +..++.++|+||+|+++|||++|+.||...
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~ 211 (280)
T cd06611 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL 211 (280)
T ss_pred ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC
Confidence 2345788999999875 345678999999999999999999998753
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-29 Score=264.39 Aligned_cols=201 Identities=31% Similarity=0.543 Sum_probs=171.8
Q ss_pred eEEeecceecccCCceEEEEEeCC------CCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
..|.+.+.||+|+||.||+|...+ ++.||+|++...... ....+.+|+++++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 458889999999999999997643 478999998765433 3468899999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcC-------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcE
Q 047790 734 LVYEYMVNGSLDDWLRNRA-------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA 800 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~-------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~v 800 (885)
+||||+++++|.+++.... ..+++..+..++.|++.+++++| +.|++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeE
Confidence 9999999999999997532 33788899999999999999999 9999999999999999999999
Q ss_pred EEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 801 KVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+++|||.+..+...... .......+..|+|||++.+..++.++||||+||++|||++ |+.||..
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~ 227 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYG 227 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 99999998765332211 1122345678999999999999999999999999999998 9999854
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=257.43 Aligned_cols=195 Identities=30% Similarity=0.464 Sum_probs=168.5
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCHH
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLD 745 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~ 745 (885)
++||+|+||.||+|...+++.+|+|.+...... ....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 478999999999999888999999998765432 2346889999999999999999999999889999999999999999
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCC
Q 047790 746 DWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT 825 (885)
Q Consensus 746 ~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~ 825 (885)
+++......+++..+..++.+++.++.|+| +.|++|||++|+||+++.++.++++|||.+................+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP 157 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCc
Confidence 998765556899999999999999999999 99999999999999999999999999999875443222122223345
Q ss_pred CccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 826 IGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 826 ~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
..|+|||+..+..++.++|+||+|+++|++++ |..||..
T Consensus 158 ~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~ 197 (250)
T cd05085 158 IKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPG 197 (250)
T ss_pred ccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCC
Confidence 67999999998889999999999999999998 9999864
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=262.43 Aligned_cols=193 Identities=23% Similarity=0.375 Sum_probs=168.5
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
+|++.++||+|+||.||+|.+. +++.||+|.+.... ......+.+|++++++++||||+++++++..+...++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 5788999999999999999864 58889999886543 223456889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+++++..+. .+++..+..++.|++.|++|+| +.||+|+||||+||+++.++.++++|||.+..+... ..
T Consensus 82 ~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---~~ 150 (279)
T cd06619 82 DGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---IA 150 (279)
T ss_pred CCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---cc
Confidence 999996643 2678889999999999999999 999999999999999999999999999998765432 12
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....++..|+|||++.+..++.++|+||+|+++|+|++|+.||...
T Consensus 151 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 196 (279)
T cd06619 151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQI 196 (279)
T ss_pred cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhh
Confidence 2346888999999999999999999999999999999999999653
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=263.31 Aligned_cols=196 Identities=24% Similarity=0.296 Sum_probs=173.8
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.|++.+.||+|++|.||+|.+. +++.+|+|.+.... ......+.+|+++++++.||||+++++++......++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 5899999999999999999875 48899999986533 1234568899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++... ..+++..+..++.|++++++||| +.|++||||+|+||+++.++.++++|||.+......
T Consensus 82 ~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~--- 154 (290)
T cd05580 82 YVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR--- 154 (290)
T ss_pred cCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---
Confidence 99999999999865 45899999999999999999999 899999999999999999999999999998776542
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....+++.|+|||.+.+..++.++|+||+|+++|+|++|+.||...
T Consensus 155 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 201 (290)
T cd05580 155 -TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD 201 (290)
T ss_pred -CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 23346788999999998888899999999999999999999998643
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-29 Score=269.37 Aligned_cols=201 Identities=26% Similarity=0.420 Sum_probs=170.2
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CC----eEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QK----TVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~----~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
..+|++.+.||+|+||.||+|++.. ++ .||+|.+..... ...+++.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 4579999999999999999998643 33 389999865432 3346788999999999999999999998754 567
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+++||+++|++.+++......+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||.++.+..
T Consensus 85 ~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 85 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccC
Confidence 999999999999999876666889999999999999999999 99999999999999999999999999999987654
Q ss_pred CCCCc-ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 814 CESHV-STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 814 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
..... ......+..|+|||++.+..++.++|||||||++||+++ |+.||..
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 32221 122234568999999999999999999999999999998 9999865
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-30 Score=250.07 Aligned_cols=205 Identities=23% Similarity=0.299 Sum_probs=173.0
Q ss_pred EEeecceecccCCceEEEEEeCC-----CCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEe-CCeeE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-----QKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSV-GEEKL 733 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-----~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~~ 733 (885)
.|++.+.||+|+||.||+|...+ .+.+|+|+++.+.. .......+|+..++.++||||+.+..+|.. +...+
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence 48889999999999999995432 34799999986642 345678899999999999999999998876 77889
Q ss_pred EEEecccCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC----CcEEEeec
Q 047790 734 LVYEYMVNGSLDDWLRN----RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY----FEAKVSDF 805 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~----~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~----~~vkl~Df 805 (885)
+++||.+ .+|..+|+. ....++...+..+..||+.++.||| +.=|+|||+||.||++..+ |.|||+||
T Consensus 105 l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 105 LLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred EEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 9999995 499999874 2345889999999999999999999 7779999999999999766 89999999
Q ss_pred cCcccccCCCCCc--ccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC
Q 047790 806 GLARLISDCESHV--STDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870 (885)
Q Consensus 806 g~a~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~~~~~ 870 (885)
|+++.+..+-... .....-|.+|.|||.+.+. .|+.+.||||+||++.||+|-.+.|.+...+..
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~ 248 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIK 248 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcc
Confidence 9999987754332 3445678999999988875 689999999999999999999999987544433
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=262.53 Aligned_cols=199 Identities=27% Similarity=0.373 Sum_probs=173.6
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.+.||+|++|.||+|.+. +++.||+|++.... ......+.+|+.++++++|||++++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4889999999999999999875 58899999987543 23346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+ +++|.+++......+++..++.++.|++++++||| +.+++|+||+|+||+++.++.++++|||.+..........
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 156 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRL 156 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCc
Confidence 9 99999998766667999999999999999999999 8999999999999999999999999999988765433323
Q ss_pred ccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||++.+. .++.++||||+|+++|||++|.+||..
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~ 203 (286)
T cd07832 157 YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPG 203 (286)
T ss_pred cccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCC
Confidence 3445688899999988664 468999999999999999999887753
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-29 Score=262.26 Aligned_cols=198 Identities=32% Similarity=0.475 Sum_probs=172.9
Q ss_pred EeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHH--HHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDR--EFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~--~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
|++.+.||+|+||.||+|+... ++.+|+|++......... ...+|+.++++++||+|+++++++.++...++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 7899999999999999998765 668999999776533222 3356999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++.. ...+++..+..++.|+++++++|| +.+++|+||||+||++++++.++++|||.+..+.. .....
T Consensus 81 ~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~-~~~~~ 155 (260)
T PF00069_consen 81 PGGSLQDYLQK-NKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE-NNENF 155 (260)
T ss_dssp TTEBHHHHHHH-HSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS-TTSEB
T ss_pred ccccccccccc-cccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc-ccccc
Confidence 99999999983 344899999999999999999999 89999999999999999999999999999876422 22334
Q ss_pred cCCCCCCccCCccccc-CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQ-AGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~-~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....++..|+|||+.. +..++.++|+||+|+++|+|++|..||...
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4567889999999998 888999999999999999999999998754
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=273.96 Aligned_cols=199 Identities=27% Similarity=0.303 Sum_probs=169.3
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC-----
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG----- 729 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~----- 729 (885)
.+..+|++.+.||+|+||.||+|.+. .++.||+|++.... .....++.+|+.+++.++||||+++++++...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 45688999999999999999999865 48889999987543 22345678899999999999999999987543
Q ss_pred -CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 730 -EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 730 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
...|+||||+++ ++.+.+.. .++...+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 357999999954 77777753 3788899999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+..... .......++..|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 174 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 174 RTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred cccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 765432 2223456889999999999999999999999999999999999999653
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=258.56 Aligned_cols=199 Identities=26% Similarity=0.328 Sum_probs=173.3
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
+|++.+.||+|+||.||++.+. +++.+|+|.+.... ....+.+.+|+++++.++||||+++++.+..++..+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4789999999999999999865 58889999886432 234567888999999999999999999999999999999999
Q ss_pred cCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++.+++.. ....+++..+..++.|++.|++++| +.|++|+||||+||++++++.++++|||.+....... ..
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~ 156 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-AY 156 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeecccc-cc
Confidence 99999998864 3445789999999999999999999 9999999999999999999999999999987654322 12
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||+..+..++.++|+||+|+++|+|++|+.||..
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~ 202 (255)
T cd08219 157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQA 202 (255)
T ss_pred cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCC
Confidence 2234578889999999998999999999999999999999999974
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=257.54 Aligned_cols=195 Identities=27% Similarity=0.437 Sum_probs=165.8
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCH
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSL 744 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL 744 (885)
+.||+|+||.||+|... +++.+|+|.+..... .....+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46999999999999875 688899998765432 2346788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc-ccCCC
Q 047790 745 DDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV-STDTA 823 (885)
Q Consensus 745 ~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~-~~~~~ 823 (885)
.+++......+++..+..++.|+++|++||| +.|++||||||+||+++.++.++++|||.+.......... .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 9999765556899999999999999999999 9999999999999999999999999999987644311111 11112
Q ss_pred CCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 824 DTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 824 ~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.+..|+|||.+.+..++.++|+||+||++||+++ |..||..
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~ 199 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYAN 199 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 3456999999999899999999999999999998 8888853
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=260.26 Aligned_cols=200 Identities=24% Similarity=0.342 Sum_probs=172.3
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.+|++.+.||+|+||.||+|+.. +++.||+|.+.... .....++.+|+++++.++||+|+++++++...+..+++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57999999999999999999865 68899999876432 222356888999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
||+++++|.+++.. ....+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999988863 2344788999999999999999999 99999999999999999999999999999877653
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... ......++..|+|||...+..++.++|+||+|+++|||++|+.||..
T Consensus 159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~ 208 (267)
T cd08228 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 208 (267)
T ss_pred hhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcc
Confidence 221 11234577889999999988899999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=258.54 Aligned_cols=201 Identities=23% Similarity=0.312 Sum_probs=176.5
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|++.+.+|+|++|.||+|... +++.+++|.+........+.+.+|++++++++||||+++++++......+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 46899999999999999999875 47889999987655555678899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+++++.+++......+++..+..++.|++.+++||| +.+++|+|++|+||++++++.++++|||.+....... ...
T Consensus 83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~ 158 (262)
T cd06613 83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-AKR 158 (262)
T ss_pred CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhh-hcc
Confidence 999999998866456899999999999999999999 9999999999999999999999999999987654321 112
Q ss_pred cCCCCCCccCCcccccCC---CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAG---RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~---~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....++..|+|||...+. .++.++|+||+|+++|+|++|+.||...
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~ 207 (262)
T cd06613 159 KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDL 207 (262)
T ss_pred ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 234577889999998877 7889999999999999999999998653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=258.01 Aligned_cols=199 Identities=32% Similarity=0.502 Sum_probs=170.3
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.+|++.+.||+|++|.||+|...++..+|+|++.... ...+.+.+|++++++++||+++++++++. ....+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 5689999999999999999998777789999876543 23467889999999999999999998875 456789999999
Q ss_pred CCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 741 NGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 741 ~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+++|.+++... ...+++..+..++.|+++|++||| +.|++|+||+|+||++++++.++|+|||.+...........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence 99999999753 334788999999999999999999 99999999999999999999999999999976643222222
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....++..|+|||...+..++.++|+||+|+++|||++ |+.||..
T Consensus 161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 206 (260)
T cd05069 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 206 (260)
T ss_pred CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 23345678999999998899999999999999999999 8999864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=264.59 Aligned_cols=202 Identities=31% Similarity=0.526 Sum_probs=172.2
Q ss_pred eEEeecceecccCCceEEEEEe------CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
..|.+.+.||+|+||.||++.. .++..+|+|.+..........+.+|++++++++||+|+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 3588999999999999999974 2345688998876554445678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcC------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEE
Q 047790 735 VYEYMVNGSLDDWLRNRA------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKV 802 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl 802 (885)
||||+++++|.+++.... ..+++..+..++.|++.|++|+| +.|++||||||+||++++++.+++
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEe
Confidence 999999999999987432 24899999999999999999999 999999999999999999999999
Q ss_pred eeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 803 SDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 803 ~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+|||.+..+..... .......++..|+|||++.+..++.++|+|||||++|+|++ |..||...
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~ 226 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 226 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999876543221 11223345678999999999999999999999999999998 89998643
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-30 Score=262.58 Aligned_cols=202 Identities=26% Similarity=0.327 Sum_probs=176.2
Q ss_pred eEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..|..-++||+|+||.||-++.++ |+-+|+|++.+.. ........+|..|+++++.++|+.+--.|+..+..|+|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 346667899999999999997654 8999999886432 223345778999999999999999988888899999999
Q ss_pred ecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 737 EYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
..|.||+|.-.|...+ ..+++..+..+|.+|+.+|++|| +.+||+||+||+||++|+.|+|+|+|.|+|..+....
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~ 341 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK 341 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCCCC
Confidence 9999999988776543 45999999999999999999999 9999999999999999999999999999999987644
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
.. ....||.+|||||++.+..|+...|.||+||++|||+.|+-||...-+
T Consensus 342 ~~--~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke 391 (591)
T KOG0986|consen 342 PI--RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE 391 (591)
T ss_pred cc--ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence 33 345899999999999999999999999999999999999999986433
|
|
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=257.71 Aligned_cols=201 Identities=28% Similarity=0.472 Sum_probs=171.9
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
...+|++.++||+|+||.||+|...++..+|+|.+.... .....+.+|++++++++|++|+++++++.. ...+++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 346799999999999999999998788889999886543 234678899999999999999999999876 778999999
Q ss_pred ccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 739 MVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
+++++|.+++... ....++..+..++.|++.|++|+| +.|++|+||+|+||+++.++.++++|||.+.........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 158 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 158 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence 9999999999753 344788889999999999999999 899999999999999999999999999998765432222
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
......++..|+|||++.+..++.++|+||+||++|++++ |+.||..
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~ 206 (260)
T cd05073 159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 206 (260)
T ss_pred cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCC
Confidence 2222334567999999998889999999999999999999 9999864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=272.51 Aligned_cols=203 Identities=26% Similarity=0.400 Sum_probs=169.2
Q ss_pred eeEEeecceecccCCceEEEEEeCC------CCeEEEEEeccccc-ccHHHHHHHHHHhcccC-CCCccceeeeeEeCCe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATG-QCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~ 731 (885)
-.+|++.++||+|+||.||+|.+.. +..||+|++..... ...+.+.+|+++++.+. ||||+++++++.....
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 3468899999999999999997532 34699999865432 23457889999999996 9999999999998899
Q ss_pred eEEEEecccCCCHHHHHhhcC-----------------------------------------------------------
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA----------------------------------------------------------- 752 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~----------------------------------------------------------- 752 (885)
.|+||||+++|+|.+++....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999998876421
Q ss_pred ------------------------------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC
Q 047790 753 ------------------------------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND 796 (885)
Q Consensus 753 ------------------------------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~ 796 (885)
..+++..+..++.|+++|++||| +.+|+||||||+||++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeC
Confidence 23677788899999999999999 899999999999999999
Q ss_pred CCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 797 YFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 797 ~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
++.+|++|||.+......... ......++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~ 343 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM 343 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence 999999999998765432211 1222346678999999999899999999999999999997 99998643
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=258.67 Aligned_cols=200 Identities=23% Similarity=0.328 Sum_probs=173.8
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
+.|++.+.||+|++|.||+|... +++.||+|.++... .....++.+|++++++++|++++++++++..++..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 46999999999999999999876 68999999886432 223467889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
||+++++|.+++.. ....+++..+..++.+++.+++||| +.|++||||+|+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999998864 2344789999999999999999999 99999999999999999999999999999876543
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. .......++..|+|||...+..++.++|+||+||++|+|++|+.||..
T Consensus 159 ~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 208 (267)
T cd08224 159 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 208 (267)
T ss_pred CC-cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCccc
Confidence 22 122234578889999999988999999999999999999999999854
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=263.39 Aligned_cols=199 Identities=20% Similarity=0.293 Sum_probs=171.0
Q ss_pred EeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
|++.+.||+|+||.||+|.... +..+++|.+..........+.+|+++++.++||||+++++++..+...++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 6788999999999999998765 777888888655444456788899999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
+++..++......+++..+..++.|++++++||| +.|++||||||+||+++.++.++++|||.+....... .....
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~~~ 162 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRRDS 162 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccccccc-ccccc
Confidence 9999988765556899999999999999999999 9999999999999999999999999999987654321 12223
Q ss_pred CCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..++..|+|||++. +..++.++|+||+||++|||++|+.||...
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~ 211 (282)
T cd06643 163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL 211 (282)
T ss_pred ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcccc
Confidence 45788999999874 345778999999999999999999998743
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=257.92 Aligned_cols=200 Identities=27% Similarity=0.399 Sum_probs=174.5
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.|.+.+.||+|++|.||+|... +++.|++|.+.... ......+.+|+++++.++|||++++++++..++..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 3788999999999999999875 58889999886432 23456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 739 MVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
+++++|.+++... ...+++..+..++.|++.|+.||| +.|++|+|++|+||+++.++.++++|||.+..+.....
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~- 156 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN- 156 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc-
Confidence 9999999999764 456899999999999999999999 89999999999999999999999999999887654322
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||+..+..++.++|+||||+++|+|++|+.||...
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 204 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDAN 204 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 222345788999999999999999999999999999999999998643
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=259.64 Aligned_cols=201 Identities=29% Similarity=0.480 Sum_probs=171.5
Q ss_pred eEEeecceecccCCceEEEEEeC----CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
.+|++.+.||+|+||.||+|.+. .+..+|+|.++.... .....+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46899999999999999999764 234789998865432 2345788999999999999999999999988999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|.+++......+++..+..++.|++.+++++| +.+++||||||+||+++.++.++++|||.+..+....
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 9999999999999876666899999999999999999999 9999999999999999999999999999988765432
Q ss_pred CCccc--CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 816 SHVST--DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 816 ~~~~~--~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
..... ....+..|+|||++.+..++.++|+||||+++||+++ |+.||..
T Consensus 161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~ 212 (267)
T cd05066 161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWE 212 (267)
T ss_pred ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCccc
Confidence 22111 1123467999999999999999999999999999886 9999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=266.84 Aligned_cols=195 Identities=23% Similarity=0.324 Sum_probs=160.5
Q ss_pred cceecccCCceEEEEEeC---CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe--CCeeEEEEeccc
Q 047790 666 ENVIGGGGFRTAFKGTMP---DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV--GEEKLLVYEYMV 740 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~---~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~ 740 (885)
+++||+|+||.||+|+.. +++.||+|.+.... ....+.+|+++++.++||||+++++++.. +...+++|||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 568999999999999864 46789999986543 23567789999999999999999998854 456789999984
Q ss_pred CCCHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE----cCCCcEEEeeccCc
Q 047790 741 NGSLDDWLRNR--------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL----NDYFEAKVSDFGLA 808 (885)
Q Consensus 741 ~~sL~~~l~~~--------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~----~~~~~vkl~Dfg~a 808 (885)
+++.+++... ...+++..++.++.|++.|++||| +.||+||||||+||++ +..+.+||+|||.+
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 5888877531 224888999999999999999999 9999999999999999 45678999999999
Q ss_pred ccccCCCCC--cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 809 RLISDCESH--VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 809 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
..+...... ......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 876543221 1234567899999999877 458899999999999999999999997543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=260.23 Aligned_cols=201 Identities=27% Similarity=0.475 Sum_probs=170.4
Q ss_pred eEEeecceecccCCceEEEEEeCC-C---CeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-Q---KTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~---~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
.+|++.+.||+|+||.||+|.... + ..||+|.+.... .....++..|++++++++||||+++++++..+...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 458899999999999999998653 3 359999987543 23346789999999999999999999999988899999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|.+++......+++..++.++.|++.|++||| +.|++||||||+||+++.++.++++|||.+.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 9999999999999876666899999999999999999999 8999999999999999999999999999987654322
Q ss_pred CCcc--cCCC--CCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 816 SHVS--TDTA--DTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 816 ~~~~--~~~~--~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.... .... .+..|+|||+..+..++.++||||+||++||+++ |..||..
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~ 214 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 214 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCC
Confidence 1111 1111 1347999999999999999999999999999886 9999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=272.97 Aligned_cols=199 Identities=28% Similarity=0.299 Sum_probs=169.1
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeC-----
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVG----- 729 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~----- 729 (885)
.+..+|++.+.||+|+||.||+|.+. .++.||+|++..... ....++.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 46688999999999999999999865 488899999875432 2345677899999999999999999988643
Q ss_pred -CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 730 -EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 730 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
...++||||+++ ++.+.+.. .++...+..++.|+++|++||| +.||+||||||+||+++.++.+||+|||.+
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCccc
Confidence 346899999965 67776653 3788899999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+..... .......++..|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 167 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 167 RTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred ccCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 765432 2223456889999999999999999999999999999999999999653
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=258.16 Aligned_cols=199 Identities=26% Similarity=0.394 Sum_probs=176.8
Q ss_pred eEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|++.++||+|++|.||+|...+ ++.+++|.+..... ...+.+|++++++++||||+++++++..+...|+++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 468999999999999999998775 78899999865432 578999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++......+++..+..++.|++.++.||| +.+++|||++|+||+++.++.++++|||.+........ ..
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~ 156 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-KR 156 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc-cc
Confidence 999999999866667899999999999999999999 89999999999999999999999999999887654221 22
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....++..|+|||+..+..++.++||||+|+++|+|++|+.||...
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~ 202 (256)
T cd06612 157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDI 202 (256)
T ss_pred ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 2345788999999999999999999999999999999999998643
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=264.74 Aligned_cols=200 Identities=25% Similarity=0.307 Sum_probs=171.7
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEeccc--ccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQA--TGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~--~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 736 (885)
...|++.++||+||.+.||++...+.+.||+|++... ..+....+.+|+..|.+++ |.+|+++|+|...+++.||||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 3569999999999999999999988889999887543 3344578999999999997 899999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||= ..+|..+++.+....+..-++.+..|++.|+.+.| +.||||.|+||.|+++-+ |.+||+|||.|..+..+..
T Consensus 440 E~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred ecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhcccCcccc
Confidence 965 66999999977665665588899999999999999 999999999999999975 4899999999998876443
Q ss_pred C-cccCCCCCCccCCcccccCC-----------CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 817 H-VSTDTADTIGYVPSEYGQAG-----------RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 817 ~-~~~~~~~~~~y~aPE~~~~~-----------~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
. ....-.||+.||+||.+..- +.++++||||+||++|+|+.|+.||+.
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~ 574 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ 574 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH
Confidence 3 33456799999999976542 246789999999999999999999973
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=264.71 Aligned_cols=198 Identities=27% Similarity=0.333 Sum_probs=164.6
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhccc---CCCCccceeeeeEe-----CC
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMV---KHQNLVQLLGYCSV-----GE 730 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l---~~~~i~~~~~~~~~-----~~ 730 (885)
+|++.+.||+|+||.||+|++. +++.||+|.+...... ......+|+++++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4889999999999999999876 4888999988653322 234566777777665 69999999998754 24
Q ss_pred eeEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
..+++|||+. +++.+++... ...+++..+..++.|++.|++|+| +.||+||||||+||+++.++.+||+|||.+.
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 5789999996 4888888753 334899999999999999999999 9999999999999999999999999999987
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..... .......++..|+|||++.+..++.++||||+||++|+|++|++||...
T Consensus 157 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~ 210 (288)
T cd07863 157 IYSCQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 210 (288)
T ss_pred cccCc--ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence 76432 1223346788999999999999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=289.36 Aligned_cols=202 Identities=30% Similarity=0.492 Sum_probs=174.0
Q ss_pred EEeecceecccCCceEEEEEeCC--CC----eEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD--QK----TVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~--~~----~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
..++.+.||+|+||.||+|...+ +. .||+|.+.+.. .++..+|.+|..+|+.+.||||+++++++.+....++
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 46678999999999999997544 43 38999987654 4456789999999999999999999999998889999
Q ss_pred EEecccCCCHHHHHhhc------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 735 VYEYMVNGSLDDWLRNR------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
++|||+||+|..++++. ...++..+...++.++++++.||+ ++.+|||||.++|.|++....|||+|||+|
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccchh
Confidence 99999999999999975 566899999999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCCCcccCC-CCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCC
Q 047790 809 RLISDCESHVSTDT-ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPEF 866 (885)
Q Consensus 809 ~~~~~~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~~ 866 (885)
+.+.+.+....... .-...|||||.+....++.++|||||||++||++| |..||....
T Consensus 850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~ 909 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS 909 (1025)
T ss_pred HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc
Confidence 96544332222222 33468999999999999999999999999999999 788876543
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=263.27 Aligned_cols=203 Identities=30% Similarity=0.546 Sum_probs=171.7
Q ss_pred eeEEeecceecccCCceEEEEEeCC------CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|+||.||+|.... .+.||+|.+..... ....++.+|++++++++||+|+++++++......
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 3468999999999999999997543 25789998865432 2345688999999999999999999999988899
Q ss_pred EEEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC
Q 047790 733 LLVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY 797 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~ 797 (885)
+++|||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCC
Confidence 99999999999999987531 34788899999999999999999 9999999999999999999
Q ss_pred CcEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 798 FEAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 798 ~~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+.++|+|||.+........ .......++..|+|||+..+..++.++|||||||++|||++ |..||...
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~ 230 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGF 230 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999876543221 12233345788999999998899999999999999999998 99998753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=263.32 Aligned_cols=201 Identities=32% Similarity=0.522 Sum_probs=172.0
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+|.+.+.||+|+||.||+|.+. ++..+++|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 46888999999999999999743 355688888876554445678899999999999999999999999899999
Q ss_pred EEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc
Q 047790 735 VYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE 799 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~ 799 (885)
||||+++++|.+++.... ..+++..++.++.|++.|++||| ++|++||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCc
Confidence 999999999999987432 23788999999999999999999 999999999999999999999
Q ss_pred EEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 800 AKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 800 vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
++++|||.+........ .......++..|+|||++.+..++.++||||+||++|||++ |+.||..
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 228 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQ 228 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999876543221 12223445778999999999999999999999999999999 9999854
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-28 Score=257.06 Aligned_cols=199 Identities=27% Similarity=0.398 Sum_probs=172.0
Q ss_pred EEeecceecccCCceEEEEEeCCCCeEEEEEeccccc------ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG------QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+|++.+.||+|+||.||+|...+++.+|+|.+..... .....+.+|++++++++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 3788999999999999999888899999998864321 1224688899999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|.+++.... .+++..++.++.|++.+++|+| +.+++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 81 MEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 99999999999997543 4789999999999999999999 8999999999999999999999999999887653211
Q ss_pred -----CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 -----SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
........++..|+|||+..+..++.++||||+||++|++++|+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~ 210 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLAS 210 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCcccc
Confidence 1112234578899999999998899999999999999999999999964
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=262.09 Aligned_cols=202 Identities=31% Similarity=0.512 Sum_probs=170.3
Q ss_pred eEEeecceecccCCceEEEEEe-----CCCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM-----PDQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~-----~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
..|++.++||+|+||.||+|.. .+++.+++|.+..... .....+.+|++++++++||||+++++++..+...|+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4588999999999999999974 2467899999875432 233578899999999999999999999999899999
Q ss_pred EEecccCCCHHHHHhhcC----------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC
Q 047790 735 VYEYMVNGSLDDWLRNRA----------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~----------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~ 798 (885)
||||+++++|.+++..+. ..+++..+..++.|++.|++|+| +.|++||||||+||+++.++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCC
Confidence 999999999999985321 23678889999999999999999 89999999999999999999
Q ss_pred cEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 799 EAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 799 ~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.+|++|||.+........ .......++..|+|||+..+..++.++|||||||++|||++ |..||...
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~ 230 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF 230 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999876543221 12223345677999999988889999999999999999999 99998653
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=260.39 Aligned_cols=201 Identities=34% Similarity=0.542 Sum_probs=171.2
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+|++.++||+|+||.||+|... ++..+|+|.+..........+.+|++++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45788999999999999999632 356788998876655556789999999999999999999999998899999
Q ss_pred EEecccCCCHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcE
Q 047790 735 VYEYMVNGSLDDWLRNRA--------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA 800 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~v 800 (885)
+|||+++++|.+++.... ..+++..+..++.|++.|++||| +.|++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCE
Confidence 999999999999987543 24788999999999999999999 9999999999999999999999
Q ss_pred EEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 801 KVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+++|||.+..+..... .......++..|+|||+..+..++.++|||||||++|||++ |+.||..
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 227 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQ 227 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCcc
Confidence 9999999876543211 11122334678999999999999999999999999999998 8999853
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=260.24 Aligned_cols=199 Identities=23% Similarity=0.309 Sum_probs=172.1
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|++.++||+|+||.||+|... +++.||+|.++.........+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46889999999999999999865 58889999987654444556788999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++.... .+++..++.++.|++.+++||| +.|++|+||||+||+++.++.++++|||.+....... ...
T Consensus 89 ~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-~~~ 163 (267)
T cd06645 89 GGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-AKR 163 (267)
T ss_pred CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-ccc
Confidence 9999999987544 5899999999999999999999 8999999999999999999999999999987654321 122
Q ss_pred cCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....++..|+|||++. ...++.++|+||+||++|+|++|+.||..
T Consensus 164 ~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~ 211 (267)
T cd06645 164 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFD 211 (267)
T ss_pred ccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCccc
Confidence 3346888999999874 45578899999999999999999999853
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=280.36 Aligned_cols=196 Identities=20% Similarity=0.286 Sum_probs=161.7
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCC------CCccceeeeeEeC-Ce
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKH------QNLVQLLGYCSVG-EE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~~~~~~~~~-~~ 731 (885)
.++|++.++||+|+||.||+|.+. .++.||+|+++... ........|+++++.++| ++++.+++++..+ .+
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence 468999999999999999999865 47789999986432 223455667777777654 4588888888654 57
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCCCCcEEEcCCC------------
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIKTSNILLNDYF------------ 798 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlkp~Nil~~~~~------------ 798 (885)
.|+|||++ ++++.+++..+ ..+++..+..++.|++.|++||| + .||+||||||+||+++..+
T Consensus 207 ~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~ 281 (467)
T PTZ00284 207 MCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVTNRALP 281 (467)
T ss_pred EEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence 88999988 77899888754 35899999999999999999999 6 5999999999999998655
Q ss_pred ----cEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 799 ----EAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 799 ----~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+||+|||.+.... .......+|..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 282 ~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 282 PDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred CCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 49999999875432 2223457899999999999999999999999999999999999999754
|
|
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-28 Score=259.83 Aligned_cols=201 Identities=23% Similarity=0.356 Sum_probs=170.5
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
...|++.+.||+|++|.||+|..+ +++.||+|.+..... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 467999999999999999999876 588999999865432 223456789999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+.+ +|.+++......+++..++.++.|+++|+.||| +.+++||||||+||+++.++.++++|||.+........
T Consensus 84 ~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~- 158 (291)
T cd07844 84 YLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK- 158 (291)
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc-
Confidence 9974 999988766556899999999999999999999 89999999999999999999999999999865432111
Q ss_pred cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||+..+ ..++.++||||+|+++|+|++|+.||...
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 207 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGS 207 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1122346788999998865 45789999999999999999999999643
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=259.12 Aligned_cols=197 Identities=24% Similarity=0.365 Sum_probs=174.2
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
+|++.+.||.|++|.||+|... +++.||+|.+.... ......+.+|+++++.++||||+++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5889999999999999999865 58889999987543 233457889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++... .+++..+..++.|++.++.|+| +.+++|||++|+||++++++.++++|||.+....... ...
T Consensus 82 ~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~ 155 (274)
T cd06609 82 GGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-SKR 155 (274)
T ss_pred CCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc-ccc
Confidence 999999999854 5899999999999999999999 9999999999999999999999999999998775432 222
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....++..|+|||+..+..++.++||||+|+++|+|++|+.||..
T Consensus 156 ~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~ 200 (274)
T cd06609 156 NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSD 200 (274)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 334677889999999998899999999999999999999999964
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=263.13 Aligned_cols=196 Identities=26% Similarity=0.329 Sum_probs=170.6
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.|++.++||+|+||.||+|.+. ++..+|+|.+..... ....++.+|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 5889999999999999999865 477888888765422 23456889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++|.+++... ..+++..+..++.|+++++.||| + .+++|+||||+||++++++.++++|||.+...... .
T Consensus 82 ~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---~ 154 (308)
T cd06615 82 DGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 154 (308)
T ss_pred CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEccCCCccccccc---c
Confidence 999999999754 45889999999999999999999 6 58999999999999999999999999988665332 1
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||+..+..++.++|+||+||++|+|++|+.||..
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~ 200 (308)
T cd06615 155 ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200 (308)
T ss_pred cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 2334678899999999888899999999999999999999999853
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-28 Score=261.01 Aligned_cols=198 Identities=25% Similarity=0.346 Sum_probs=168.5
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.++||+|++|.||+|++. +|+.||+|++..... .....+.+|++++++++||||+++++++.+....++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4888999999999999999875 588999999865322 2235677899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++ +++.+++......+++..++.++.|+++|++||| +.+++||||||+||+++.++.++|+|||.+........ .
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-~ 155 (284)
T cd07839 81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR-C 155 (284)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC-C
Confidence 96 5888887765566899999999999999999999 89999999999999999999999999999876543221 1
Q ss_pred ccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||++.+. .++.++||||+||++|+|++|..||..
T Consensus 156 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~ 202 (284)
T cd07839 156 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 202 (284)
T ss_pred cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcC
Confidence 2234567899999988765 468999999999999999999998643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=286.20 Aligned_cols=206 Identities=20% Similarity=0.285 Sum_probs=168.3
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEe--CCe
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSV--GEE 731 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~ 731 (885)
.....+|++.+.||+|+||.||+|.+.. ++.+|+|++.... ......+..|+.++++++||||++++++|.. ...
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 3455689999999999999999998765 6778888876432 2234578899999999999999999998854 356
Q ss_pred eEEEEecccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccC----CCCceecCCCCCcEEEcC--------
Q 047790 732 KLLVYEYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGF----KPYIIHMDIKTSNILLND-------- 796 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~----~~~i~H~dlkp~Nil~~~-------- 796 (885)
.|+||||+++++|.+++... ...+++..++.|+.||+.||+|||... ..+|+||||||+||+++.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999999999998742 345899999999999999999999321 145999999999999964
Q ss_pred ---------CCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 797 ---------YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 797 ---------~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.+.+||+|||++..+... .......+++.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 234899999999776432 22234468999999998864 4578999999999999999999999964
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-29 Score=263.24 Aligned_cols=202 Identities=25% Similarity=0.418 Sum_probs=176.6
Q ss_pred EeecceecccCCceEEEEEeCC-----CCeEEEEEecc-cccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD-----QKTVAVKKLSQ-ATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~-----~~~valK~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.+..++||+|-||.||+|...+ .-.||+|.++. ..+.+.+.|..|+.+|+.+.||||+++++++.+ ...|+||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wivm 469 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVM 469 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEE
Confidence 5567899999999999997532 33588999886 345567789999999999999999999999985 6789999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|.++-|.|.++++.+...++......++.|++.|++||| +..+|||||.++||+|....-||++|||+++.+.++..
T Consensus 470 EL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~y 546 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAY 546 (974)
T ss_pred ecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccccch
Confidence 999999999999988888999999999999999999999 99999999999999999888899999999998877544
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPEFED 868 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~~~~ 868 (885)
.......-...|||||-+..+.++.++|||-|||+|||++. |..||.+....
T Consensus 547 YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs 599 (974)
T KOG4257|consen 547 YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS 599 (974)
T ss_pred hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc
Confidence 44333445678999999999999999999999999999876 99999976443
|
|
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-28 Score=257.20 Aligned_cols=202 Identities=24% Similarity=0.369 Sum_probs=170.4
Q ss_pred eeEEeecceecccCCceEEEEEeCC----CCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
..+|.+.++||+|+||.||+|.+.+ ...||+|...... ....+.+.+|+++++++.||||+++++++.+ ...++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 3468899999999999999997643 3468899887554 3345678899999999999999999998875 55789
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++......+++..+..++.+++.|++|+| +.+++||||||+||+++..+.++++|||.+......
T Consensus 84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 84 VMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 99999999999999865556899999999999999999999 999999999999999999999999999998766443
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.........++..|+|||.+.+..++.++||||+|+++||+++ |..||...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~ 212 (270)
T cd05056 161 SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGV 212 (270)
T ss_pred cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCC
Confidence 2222222334567999999988899999999999999999886 99998654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-28 Score=254.32 Aligned_cols=197 Identities=30% Similarity=0.505 Sum_probs=172.7
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
...|++.+.||.|++|.||+|... ++.||+|.+..... ..+++.+|+.+++.++|+||+++++++......++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 457899999999999999999875 78899999976654 4567889999999999999999999998888999999999
Q ss_pred cCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++|.++++... ..+++..+..++.|++.+++|+| +.+++||||||+||+++.++.++++|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-- 157 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-- 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence 9999999997644 25899999999999999999999 99999999999999999999999999999887643211
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
....+..|+|||++....++.++|+||+|+++||+++ |+.||...
T Consensus 158 --~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 203 (256)
T cd05039 158 --SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 203 (256)
T ss_pred --cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 2234567999999988889999999999999999997 99998643
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-28 Score=256.45 Aligned_cols=199 Identities=25% Similarity=0.409 Sum_probs=170.6
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccccc---------HHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQC---------DREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~---------~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
+|.+.+.||+|++|.||+|... +++.+|+|.+....... .+.+.+|++++++++||+|+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3778899999999999999864 57889999886543221 2467889999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.+++|||+++++|.+++... ..+++..+..++.|++.|++|+| +.|++||||+|+||++++++.++++|||.+...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 99999999999999999754 44888999999999999999999 899999999999999999999999999998776
Q ss_pred cCCCCC-----cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 812 SDCESH-----VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 812 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
...... ......++..|+|||+..+..++.++|+||+||++|++++|+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 214 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPD 214 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence 421111 11123477889999999988899999999999999999999999974
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-28 Score=258.16 Aligned_cols=199 Identities=26% Similarity=0.323 Sum_probs=168.6
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.|++.+.||+|++|.||+|+.. +++.||+|++..... .....+.+|++++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 3788999999999999999875 588999999865332 2345788899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNR--AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~--~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
++ +++.+++... ...+++..++.++.|+++|++||| +.+++||||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 96 5888887642 245899999999999999999999 9999999999999999999999999999987654322
Q ss_pred CcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......++..|+|||++.+. .++.++||||+||++|+|++|+.||...
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~ 205 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGD 205 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 122233567889999987654 5688999999999999999999999743
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-28 Score=255.73 Aligned_cols=199 Identities=24% Similarity=0.322 Sum_probs=168.2
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc-----ccHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG-----QCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKL 733 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~ 733 (885)
.|++.++||+|+||.||.|...+ ++.||+|.+..... .....+.+|++++++++||+|+++++++.+. ...+
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS 82 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence 58899999999999999998654 88999998753221 1235688899999999999999999988653 4678
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
++|||+++++|.+++... ..+++..+..++.|++.+++++| +.+++|+||+|+||+++.++.++++|||.+.....
T Consensus 83 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 83 IFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred EEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 999999999999998754 34788899999999999999999 99999999999999999999999999999876532
Q ss_pred CCC--CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CES--HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... .......++..|+|||+..+..++.++|+|||||++|++++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 211 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAE 211 (265)
T ss_pred ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCc
Confidence 111 111234578899999999988899999999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=263.01 Aligned_cols=201 Identities=30% Similarity=0.468 Sum_probs=167.0
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CC--eEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QK--TVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~--~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 733 (885)
-+..|++.+.||+|+||.||+|.+.+ +. .+|+|.+..... ....++.+|++++.++ +||||+++++++..++..+
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 35679999999999999999998653 43 457777654332 2345788899999999 7999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC
Q 047790 734 LVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~ 798 (885)
+||||+++++|.+++.... ..+++..+..++.|++.|++||| +.|++||||||+||+++.++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCC
Confidence 9999999999999987432 24788999999999999999999 99999999999999999999
Q ss_pred cEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 799 EAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 799 ~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.++++|||.+..... .........+..|+|||++.+..++.++|||||||++|||+| |..||..
T Consensus 162 ~~kl~dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 226 (303)
T cd05088 162 VAKIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 226 (303)
T ss_pred cEEeCccccCcccch--hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCccc
Confidence 999999999864221 111111233567999999988889999999999999999998 9999864
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-28 Score=267.46 Aligned_cols=190 Identities=23% Similarity=0.284 Sum_probs=164.2
Q ss_pred eEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|++.+.||+|+||.||+|.+.. ++.||+|+.... ....|+.++++++||||+++++++......++|||++
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence 469999999999999999998764 678888875332 2346899999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
.+++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++..+.++|+|||.++..... ...
T Consensus 140 -~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~ 213 (357)
T PHA03209 140 -SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--PAF 213 (357)
T ss_pred -CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccccC--ccc
Confidence 46888888766667999999999999999999999 899999999999999999999999999998753321 122
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~ 862 (885)
....++..|+|||++.+..++.++||||+||++|||+++..|+
T Consensus 214 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 3356899999999999999999999999999999999866554
|
|
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-28 Score=256.43 Aligned_cols=199 Identities=25% Similarity=0.295 Sum_probs=175.9
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.|++.+.||.|+||.||+|.+. .++.||+|.+.+... ...+.+.+|++++++++||||+++++++..+...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 3889999999999999999876 488999999975432 235678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++... ..+++..+..++.|+++++.||| +.+++|+||+|+||++++++.++++|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence 99999999999865 45899999999999999999999 8999999999999999999999999999987765422
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
......++..|+|||+..+..++.++|+||+|+++|+|++|+.||....
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 203 (258)
T cd05578 155 LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHS 203 (258)
T ss_pred cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCC
Confidence 2234567889999999998889999999999999999999999998544
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=260.39 Aligned_cols=199 Identities=29% Similarity=0.461 Sum_probs=165.5
Q ss_pred eEEeecceecccCCceEEEEEeCC-CC--eEEEEEecccc-cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QK--TVAVKKLSQAT-GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~--~valK~~~~~~-~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 735 (885)
..|++.+.||+|+||.||+|...+ +. .+++|.++... ....+.+.+|++++.++ +||||+++++++...+..+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468999999999999999998654 32 46888776432 22345788999999999 699999999999988899999
Q ss_pred EecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcE
Q 047790 736 YEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA 800 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~v 800 (885)
|||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence 99999999999986422 24788899999999999999999 8999999999999999999999
Q ss_pred EEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 801 KVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
|++|||.+...... ........+..|+|||+..+..++.++|||||||++|||++ |..||..
T Consensus 159 kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~ 221 (297)
T cd05089 159 KIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCG 221 (297)
T ss_pred EECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 99999998643211 11111223457999999998889999999999999999997 9999864
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-28 Score=254.01 Aligned_cols=199 Identities=25% Similarity=0.329 Sum_probs=174.0
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.+.||+|+||.||.++.. +++.+++|.+.... .....++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4889999999999999998754 58889999876432 23346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 739 MVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
+++++|.+++... ...+++..+..++.|++.+++|+| +.+++|+|++|+||++++++.+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999999999764 455899999999999999999999 89999999999999999999999999999877644321
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......++..|+|||+..+..++.++|+||+|+++|||++|+.||..
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~ 203 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDA 203 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCC
Confidence 22345678999999999988899999999999999999999999865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-28 Score=260.33 Aligned_cols=198 Identities=24% Similarity=0.316 Sum_probs=169.5
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc-----cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ-----CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+|++.+.||+|++|.||+|... +++.||+|++...... ....+..|++++++++|+||+++++++.++...++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4788999999999999999865 5889999999754322 234577899999999999999999999998999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+ +++|.+++......+++..+..++.|+++|++||| +.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 9999 88999999865546899999999999999999999 9999999999999999999999999999998765432
Q ss_pred CCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. .....++..|+|||.+.+ ..++.++|+||+||++|||++|..||..
T Consensus 157 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~ 205 (298)
T cd07841 157 RK-MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPG 205 (298)
T ss_pred cc-ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccC
Confidence 22 222346778999998755 4578999999999999999999877754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-28 Score=254.10 Aligned_cols=196 Identities=31% Similarity=0.521 Sum_probs=171.3
Q ss_pred ceecccCCceEEEEEeCC----CCeEEEEEeccccccc-HHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATGQC-DREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~~~-~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
+.||+|+||.||+|...+ +..|++|.+....... .+.+.+|+++++.++|++++++++++..+...+++|||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 479999999999998754 7889999987654332 56788999999999999999999999988999999999999
Q ss_pred CCHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 742 GSLDDWLRNR--------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 742 ~sL~~~l~~~--------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
++|.+++... ...+++..+..++.|++.|+++|| +.+++||||+|+||++++++.++++|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999875 466899999999999999999999 99999999999999999999999999999987654
Q ss_pred CCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 814 CES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 814 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
... .......++..|+|||.+....++.++||||+|+++|+|++ |..||...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 211 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL 211 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC
Confidence 321 12233456788999999998899999999999999999999 69998643
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=258.12 Aligned_cols=200 Identities=23% Similarity=0.312 Sum_probs=173.0
Q ss_pred eEEeecceecccCCceEEEEEe-CCCCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..|++.+.||+|++|.||+|.. .+++.+|+|.+..... ....++.+|+++++.++||||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688999999999999999986 4689999998765322 23357889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
||+++++|.+++.. ....+++..++.++.|++.+++||| +.|++|+||+|+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998863 2345889999999999999999999 99999999999999999999999999999876643
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... ......++..|+|||+..+..++.++|+||+|+++|+|++|..||..
T Consensus 159 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 208 (267)
T cd08229 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 208 (267)
T ss_pred CCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCccc
Confidence 221 12234578899999999988899999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=276.31 Aligned_cols=202 Identities=28% Similarity=0.488 Sum_probs=177.5
Q ss_pred eeEEeecceecccCCceEEEEEeC----CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.....|+++||.|.||.|++|+.+ ....||+|.++.... ....+|..|+.||-++.||||+++.++....+..++
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEE
Confidence 345678999999999999999754 355699999986553 345689999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|.|||+.|+|+.+++.+++.+...+...+.+.|+.+++||- +.+|||||+.++||+++.+-.+|++|||+++...++
T Consensus 708 iTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred EhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccC
Confidence 99999999999999999999999999999999999999999 999999999999999999999999999999987654
Q ss_pred CCCcccCCCC--CCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 815 ESHVSTDTAD--TIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 815 ~~~~~~~~~~--~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.........| ..+|.|||.+..++++.++||||+||+|||.++ |.+||-.
T Consensus 785 ~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd 837 (996)
T KOG0196|consen 785 PEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 837 (996)
T ss_pred CCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc
Confidence 4233333333 368999999999999999999999999999776 9999754
|
|
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-28 Score=259.34 Aligned_cols=198 Identities=25% Similarity=0.397 Sum_probs=168.4
Q ss_pred EEeecceecccCCceEEEEEe-----CCCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeE
Q 047790 662 IIVFENVIGGGGFRTAFKGTM-----PDQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKL 733 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~-----~~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~ 733 (885)
.|++.+.||+|+||.||.|.. .+++.||+|.++... ......+.+|++++++++|||++++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 478899999999999999973 347889999987543 22346788999999999999999999988765 5678
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++......+++..+..++.|++.|++|+| +.|++||||||+||+++.++.++++|||.+..+..
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence 999999999999999765556899999999999999999999 99999999999999999999999999999887654
Q ss_pred CCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 047790 814 CESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 814 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~ 862 (885)
.... ......++..|+|||+..+..++.++||||+||++||+++++.|+
T Consensus 162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~ 212 (284)
T cd05079 162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSE 212 (284)
T ss_pred CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCC
Confidence 3221 112334667899999998888999999999999999999987664
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-28 Score=259.06 Aligned_cols=202 Identities=27% Similarity=0.421 Sum_probs=168.6
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CC----eEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QK----TVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~----~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
...|++.+.||+|+||.||+|.+.. ++ .+++|.+..... ....++..|+.+++++.||||+++++++. ....+
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~ 84 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQ 84 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccE
Confidence 4568899999999999999998643 44 367777654322 22356778888999999999999999875 45577
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+++||+++++|.+++......+++..+..++.|++.|++|+| +.+++||||||+||++++++.+|++|||.++....
T Consensus 85 ~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 899999999999999876667899999999999999999999 89999999999999999999999999999987644
Q ss_pred CCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 814 CESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 814 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.... ......++..|+|||+..+..++.++|||||||++||+++ |+.||.+.
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~ 215 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGM 215 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 3222 2233456678999999998899999999999999999998 99998654
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=270.83 Aligned_cols=196 Identities=30% Similarity=0.359 Sum_probs=166.9
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeC------
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVG------ 729 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~------ 729 (885)
+..+|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 4567999999999999999999864 578899999875322 2335677899999999999999999987543
Q ss_pred CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
...|++++++ ++++.+++.. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~ 166 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR 166 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCccce
Confidence 3468999988 7899888764 34899999999999999999999 9999999999999999999999999999988
Q ss_pred cccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..... .....++..|+|||++.+ ..++.++||||+||++|+|++|+.||..
T Consensus 167 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 167 QADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred ecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 65431 223467899999999877 5688999999999999999999999964
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-28 Score=259.92 Aligned_cols=203 Identities=26% Similarity=0.438 Sum_probs=169.1
Q ss_pred eeEEeecceecccCCceEEEEEeC------CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|++|.||+|.+. .+..||+|++..... ....++.+|+.+++.++||||+++++++..+...
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~ 84 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 84 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCe
Confidence 457999999999999999998753 256799998865332 2345688999999999999999999999988899
Q ss_pred EEEEecccCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEe
Q 047790 733 LLVYEYMVNGSLDDWLRNRA---------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVS 803 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~---------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~ 803 (885)
++||||+++++|.+++.... ...++..+..++.|++.|++|+| +.+++||||||+||++++++.++++
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 85 LVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEEC
Confidence 99999999999999987522 22567788999999999999999 8999999999999999999999999
Q ss_pred eccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 804 DFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 804 Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
|||.+......... ......++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~ 225 (277)
T cd05062 162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM 225 (277)
T ss_pred CCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99998765432211 1122334678999999999899999999999999999999 78888643
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=264.70 Aligned_cols=204 Identities=27% Similarity=0.441 Sum_probs=174.7
Q ss_pred EEeecceecccCCceEEEEEeCCCCeEEEEEecccccccH-HHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCD-REFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~-~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
...+.++||+|-||.|..+....+..||+|+++....... .+|.+|+++|.+++||||+++++++..++.+++++||++
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE 618 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME 618 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence 3668999999999999999988889999999987654443 789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC-c
Q 047790 741 NGSLDDWLRNRAAS-LDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH-V 818 (885)
Q Consensus 741 ~~sL~~~l~~~~~~-~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~-~ 818 (885)
.|+|.+++.++..+ .+......|+.||+.+++||. +..+||||+.++|+++++++++||+|||.++-.-+.+.+ .
T Consensus 619 nGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 619 NGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred cCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 99999999876433 355667789999999999999 999999999999999999999999999999854432222 2
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh--CCCCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT--GKQPTGPEFED 868 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt--g~~P~~~~~~~ 868 (885)
.....-...|||+|.+.-.+++.++|||+||+++||+++ ...||..-.++
T Consensus 696 qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e 747 (807)
T KOG1094|consen 696 QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE 747 (807)
T ss_pred ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH
Confidence 222334578999999999999999999999999999776 67787654444
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=259.48 Aligned_cols=198 Identities=35% Similarity=0.585 Sum_probs=166.2
Q ss_pred eecceecccCCceEEEEEeC-----CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 664 VFENVIGGGGFRTAFKGTMP-----DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 664 ~~~~~lG~G~~g~vy~a~~~-----~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.+.+.||.|.||.||+|.+. .+..|++|.++.... ...+.+.+|++.+++++||||+++++++...+..++|||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 46789999999999999876 266799999965332 235789999999999999999999999998788999999
Q ss_pred cccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC-
Q 047790 738 YMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE- 815 (885)
Q Consensus 738 ~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~- 815 (885)
|+++|+|.+++... ...+++..+..++.|+++|++||| +.+++|+||+++||+++.++.+||+|||.+.......
T Consensus 82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 99999999999876 566999999999999999999999 8999999999999999999999999999988763211
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
............|+|||.+....++.++||||||+++||+++ |+.||..
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~ 208 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSD 208 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 122233446678999999999999999999999999999999 7788754
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-29 Score=240.86 Aligned_cols=197 Identities=26% Similarity=0.359 Sum_probs=169.9
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc----c----HHHHHHHHHHhcccC-CCCccceeeeeEeCC
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ----C----DREFAAEMETLDMVK-HQNLVQLLGYCSVGE 730 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~----~----~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~ 730 (885)
..|+-.+.+|.|..+.|.++.++ .++.+|+|++.-.... . .+...+|+.|++++. ||+|+++.++++.+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 45777899999999999988654 5888999998532211 1 134567999999986 999999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..++|+|.++.|.|.+++... -.+++...+.+..|+.+++.|+| .+.|+|||+||+||+++++.+++|+|||+|+.
T Consensus 97 F~FlVFdl~prGELFDyLts~-VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSK-VTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred hhhhhhhhcccchHHHHhhhh-eeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccceeec
Confidence 999999999999999999854 45899999999999999999999 99999999999999999999999999999998
Q ss_pred ccCCCCCcccCCCCCCccCCccccc------CCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQ------AGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
+.+.++ -...+||++|.|||.+. ..+|+...|+||.||+||-++.|.+||-
T Consensus 173 l~~Gek--LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw 229 (411)
T KOG0599|consen 173 LEPGEK--LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW 229 (411)
T ss_pred cCCchh--HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh
Confidence 876433 34578999999999654 3568889999999999999999999985
|
|
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=251.77 Aligned_cols=195 Identities=30% Similarity=0.453 Sum_probs=168.0
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCHH
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLD 745 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~ 745 (885)
++||+|++|.||+|...+++.||+|++...... ....+.+|+++++++.||+|+++++++......++||||++++++.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 479999999999999877999999998765443 3467889999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc-cCCCC
Q 047790 746 DWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS-TDTAD 824 (885)
Q Consensus 746 ~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~-~~~~~ 824 (885)
+++......++...+..++.+++.+++|+| +.+++||||+|+||+++.++.++++|||.+........... .....
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 999765556889999999999999999999 99999999999999999999999999999876542111111 11223
Q ss_pred CCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 825 TIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 825 ~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+..|+|||.+.+..++.++|+||+||++|||++ |..||..
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~ 198 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPG 198 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCcc
Confidence 567999999988889999999999999999999 8888864
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=260.87 Aligned_cols=200 Identities=26% Similarity=0.330 Sum_probs=171.4
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.+.||+|++|.||+|+.+ +++.||+|++..... ...+.+.+|++++++++|||++++++++..+...++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 6899999999999999999876 488999998865432 2345678999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++.+..+... ...+++..+..++.|++.+++||| +.+++||||||+||+++.++.++++|||.+........ .
T Consensus 82 ~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~ 156 (286)
T cd07847 82 CDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-D 156 (286)
T ss_pred cCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-c
Confidence 999888877654 345899999999999999999999 89999999999999999999999999999987654321 2
Q ss_pred ccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.....++..|+|||++.+ ..++.++|+||+|+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~ 205 (286)
T cd07847 157 YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKS 205 (286)
T ss_pred ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 223457788999998876 457889999999999999999999997543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-28 Score=254.29 Aligned_cols=194 Identities=24% Similarity=0.430 Sum_probs=162.9
Q ss_pred eecccCCceEEEEEeC---CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCC
Q 047790 668 VIGGGGFRTAFKGTMP---DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGS 743 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~~---~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~s 743 (885)
.||+|+||.||+|.+. ++..||+|++..... ...+.+.+|++++++++||+|+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999754 355689998875432 23457889999999999999999999875 457899999999999
Q ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc--C
Q 047790 744 LDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST--D 821 (885)
Q Consensus 744 L~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~--~ 821 (885)
|.+++..+...+++..+..++.|++.+++|+| +.|++||||||+||+++.++.+|++|||.+............ .
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 99999865666899999999999999999999 899999999999999999999999999998765433222111 1
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
..++..|+|||+..+..++.++|||||||++||+++ |..||...
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 202 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKM 202 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcC
Confidence 223568999999988889999999999999999996 99998643
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=266.92 Aligned_cols=197 Identities=21% Similarity=0.325 Sum_probs=172.6
Q ss_pred EeecceecccCCceEEEEEeCCCCeEE-EEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQKTVA-VKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~~~va-lK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
|+|...||-|+||.||+|..++.+..| .|++........+++.-|++|+..+.||+|+++++.|..++..|+..|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 778889999999999999987766555 6666555555678899999999999999999999988888999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
|.+..++-.-+..+.+.+++.+++|++.||.||| ++.|+|||+|+.||+++-+|.++++|||.+..... .......
T Consensus 114 GAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~qkRDs 189 (1187)
T KOG0579|consen 114 GAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQKRDS 189 (1187)
T ss_pred chHhHHHHHhccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchh-HHhhhcc
Confidence 9999998877777999999999999999999999 99999999999999999999999999998765433 2223456
Q ss_pred CCCCCccCCccc-----ccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 822 TADTIGYVPSEY-----GQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 822 ~~~~~~y~aPE~-----~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
++||++|||||+ +...+|+.++||||||+++.||..+.+|-.
T Consensus 190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHh 236 (1187)
T KOG0579|consen 190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHH 236 (1187)
T ss_pred ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcc
Confidence 789999999996 445789999999999999999999999854
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-28 Score=260.35 Aligned_cols=196 Identities=25% Similarity=0.319 Sum_probs=170.0
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
|.....||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++..++..+++|||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 334557999999999999864 5889999998654444456788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
+++.+++.. ..+++..+..++.|++.+++++| +.+++||||+|+||+++.++.++|+|||.+..+.... .....
T Consensus 103 ~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~ 176 (297)
T cd06659 103 GALTDIVSQ--TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKS 176 (297)
T ss_pred CCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccccc
Confidence 999998764 34889999999999999999999 9999999999999999999999999999987654322 11233
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..++..|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 219 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFS 219 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 4678899999999988899999999999999999999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=265.84 Aligned_cols=201 Identities=29% Similarity=0.455 Sum_probs=167.2
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEecccccc-cHHHHHHHHHHhccc-CCCCccceeeeeEe-CCe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQ-CDREFAAEMETLDMV-KHQNLVQLLGYCSV-GEE 731 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~-~~~ 731 (885)
.+|++.+.||+|+||.||+|... .++.||+|++...... ....+..|+++++++ +||||+++++++.. +..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 47999999999999999999642 2478999998754322 234677899999999 79999999998754 456
Q ss_pred eEEEEecccCCCHHHHHhhcC-----------------------------------------------------------
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA----------------------------------------------------------- 752 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~----------------------------------------------------------- 752 (885)
.+++|||+++++|.+++....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 789999999999999886321
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc-ccCCCCCCccCC
Q 047790 753 -ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV-STDTADTIGYVP 830 (885)
Q Consensus 753 -~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~-~~~~~~~~~y~a 830 (885)
..+++..+..++.|++.|++|+| +.+|+||||||+||++++++.++|+|||++..+....... .....++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 24788999999999999999999 9999999999999999999999999999998764322211 222345678999
Q ss_pred cccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 831 SEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 831 PE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
||++.+..++.++||||+||++|||++ |..||..
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~ 278 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPG 278 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999999998 9999864
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=252.55 Aligned_cols=200 Identities=30% Similarity=0.435 Sum_probs=174.1
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.+.||+|++|.||+|... +++.|++|.++..... ..+.+..|+++++.++|++|+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4888999999999999999865 6889999998755432 456789999999999999999999999988999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++... ..+++..++.++.+++++++||| +.|++|+||+|+||++++++.++++|||.+..........
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 81 CSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred CCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence 9999999999854 34788899999999999999999 9999999999999999999999999999988765433222
Q ss_pred cc---CCCCCCccCCcccccCCC---CCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 ST---DTADTIGYVPSEYGQAGR---ANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~---~~~~~~~y~aPE~~~~~~---~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ...++..|+|||++.+.. ++.++||||||+++|++++|+.||...
T Consensus 157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~ 209 (264)
T cd06626 157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL 209 (264)
T ss_pred cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence 11 345788999999988776 889999999999999999999999643
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=252.44 Aligned_cols=199 Identities=32% Similarity=0.538 Sum_probs=171.3
Q ss_pred EeecceecccCCceEEEEEeCC-----CCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD-----QKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~-----~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
+++.+.||+|+||.||+|.+.+ +..||+|.+...... ....+..|+++++.++||+|+++++++.+++..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3578899999999999998764 478999998655433 4568889999999999999999999999989999999
Q ss_pred ecccCCCHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 737 EYMVNGSLDDWLRNRAAS-LDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~-~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
||+++++|.+++...... +++..+..++.|++.++++|| +.+++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 999999999999764433 899999999999999999999 9999999999999999999999999999988765432
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
........++..|+|||...+..++.++|+||+|+++|+|++ |+.||..
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~ 207 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPG 207 (258)
T ss_pred ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence 222212336788999999988889999999999999999998 7888763
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-28 Score=253.33 Aligned_cols=194 Identities=28% Similarity=0.420 Sum_probs=167.6
Q ss_pred ceecccCCceEEEEEeCC--C--CeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMPD--Q--KTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~--~--~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
++||+|++|.||+|.+.+ + ..||+|.+..... ...+++.+|++++++++||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998643 2 3589999987655 445689999999999999999999999887 888999999999
Q ss_pred CCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc--
Q 047790 742 GSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV-- 818 (885)
Q Consensus 742 ~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~-- 818 (885)
++|.+++.... ..+++..+..++.|++.|++|+| +.+++|+||+|+||+++.++.+|++|||.+..+.......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 99999998654 45899999999999999999999 9999999999999999999999999999988765422221
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.....++..|+|||++.+..++.++||||+||++|||++ |+.||..
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 203 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAG 203 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 122346678999999999999999999999999999998 9999853
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-28 Score=257.11 Aligned_cols=199 Identities=26% Similarity=0.390 Sum_probs=173.2
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..|+..++||.|+||.||+|.+. .++.||+|.+.... ......+.+|+++++++.||+|+++++++..+...++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 35788899999999999999875 48889999887543 23356788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++.. ..+++..+..++.|++.+++++| +.+++|+|++|+||+++.++.++++|||.+....... ..
T Consensus 84 ~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~ 157 (277)
T cd06640 84 LGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IK 157 (277)
T ss_pred CCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-cc
Confidence 999999998874 34888999999999999999999 8999999999999999999999999999987664322 12
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||+..+..++.++|+|||||++|||++|..||...
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 204 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 204 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 22345788899999999888999999999999999999999998743
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=257.20 Aligned_cols=201 Identities=25% Similarity=0.436 Sum_probs=167.2
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
.+|++.++||+|+||.||+|..+ .+..||+|.+..... ....++.+|+.+++.++||+|+++++++......+
T Consensus 6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (288)
T cd05061 6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL 85 (288)
T ss_pred HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 57999999999999999998643 245799998764432 22346788999999999999999999998888999
Q ss_pred EEEecccCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEee
Q 047790 734 LVYEYMVNGSLDDWLRNRA---------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSD 804 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~---------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~D 804 (885)
+||||+++++|.+++.... ...+...+..++.|++.|++||| +.+|+||||||+||+++.++.++++|
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L~D 162 (288)
T cd05061 86 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGD 162 (288)
T ss_pred EEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEECc
Confidence 9999999999999997422 22466788899999999999999 99999999999999999999999999
Q ss_pred ccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 805 FGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 805 fg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
||.++........ ......++..|+|||...+..++.++|+|||||++|||++ |..||..
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~ 224 (288)
T cd05061 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG 224 (288)
T ss_pred CCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9998765432211 1122234667999999998889999999999999999998 7888864
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-28 Score=258.21 Aligned_cols=200 Identities=29% Similarity=0.434 Sum_probs=169.1
Q ss_pred eEEeecceecccCCceEEEEEe-----CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe--CCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM-----PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV--GEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~-----~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~~ 733 (885)
..|++.+.||+|+||.||+|.. .+++.||+|++........+.+.+|++++++++||||+++++++.. +...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4688999999999999999974 2478899999876655555678999999999999999999997643 34678
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++......+++..+..++.|++.|++||| +.|++||||||+||++++++.++++|||.+.....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 999999999999999765556899999999999999999999 99999999999999999999999999999987654
Q ss_pred CCCCc--ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 814 CESHV--STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 814 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
..... .....++..|+|||+..+..++.++|+||+||++|||++|..|+.
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~ 212 (284)
T cd05081 161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSC 212 (284)
T ss_pred CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCC
Confidence 32211 111223456999999998889999999999999999999877654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=250.17 Aligned_cols=199 Identities=29% Similarity=0.441 Sum_probs=177.7
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
+|++.+.||+|++|.||+|... +++.+++|++..........+.+|++++++++||+++++++++..+...++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4788899999999999999876 688899999977654456789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
+++|.+++......+++..+..++.|++++++++| +.+++|||++|+||++++++.++|+|||.+........ ..
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~ 155 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--RN 155 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc--cc
Confidence 99999999876556899999999999999999999 89999999999999999999999999999887654322 23
Q ss_pred CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 821 DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...++..|+|||...+..++.++|+||+|+++|+|++|+.||...
T Consensus 156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 200 (253)
T cd05122 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSEL 200 (253)
T ss_pred ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 456788999999999888999999999999999999999998754
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=252.32 Aligned_cols=192 Identities=26% Similarity=0.441 Sum_probs=162.0
Q ss_pred eecccCCceEEEEEeC---CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCC
Q 047790 668 VIGGGGFRTAFKGTMP---DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~~---~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
.||+|+||.||+|.++ +++.+|+|++..... ...+.+.+|+.+++.+.||||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 6899999999999653 578899998864432 23457889999999999999999999875 45678999999999
Q ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc--c
Q 047790 743 SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS--T 820 (885)
Q Consensus 743 sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~--~ 820 (885)
+|.+++... ..+++..+..++.|++.|++++| ++|++||||||.||++++++.++++|||.+..+........ .
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 81 PLNKFLQKN-KHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 999999754 35899999999999999999999 99999999999999999999999999999887654322211 1
Q ss_pred CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 821 DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
...++..|+|||.+....++.++|+|||||++|||++ |+.||..
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 201 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKG 201 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 2233578999999988889999999999999999998 9999874
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-28 Score=257.26 Aligned_cols=202 Identities=28% Similarity=0.424 Sum_probs=169.7
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCC----eEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQK----TVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~----~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
...+|++.++||+|+||.||+|++. +++ .||+|.+..... .....+.+|+.+++.+.||||+++++++.. ...
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~ 83 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STV 83 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCc
Confidence 3467899999999999999999864 344 478998865432 234578899999999999999999998875 457
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++++||+++|++.+++......+++..+..++.|++.|++|+| +.+++||||||+||++++++.+||+|||+++.+.
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 7999999999999999865566899999999999999999999 9999999999999999999999999999998765
Q ss_pred CCCCCc-ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 813 DCESHV-STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 813 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
...... .....++..|+|||...+..++.++|||||||++||+++ |..||..
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 214 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG 214 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 322221 112234578999999999999999999999999999998 8999864
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=256.48 Aligned_cols=200 Identities=26% Similarity=0.346 Sum_probs=168.7
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..|++.+.||+|+||.||+|... +++.||+|.+..... .....+.+|+++++.++|+||+++++++..+...++||||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence 57999999999999999999764 588999999865432 2234677899999999999999999999998999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+. +++.+++......+.+..+..++.|++.|++||| +.+|+|+||||+||+++.++.++|+|||.+....... ..
T Consensus 85 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~ 159 (291)
T cd07870 85 MH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-QT 159 (291)
T ss_pred cc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC-CC
Confidence 95 6887777655555788889999999999999999 8999999999999999999999999999987643321 11
Q ss_pred ccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||++.+. .++.++||||+||++|+|++|+.||...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 2233468899999998764 5788999999999999999999999643
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=252.14 Aligned_cols=199 Identities=23% Similarity=0.330 Sum_probs=168.7
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-----cccHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-----GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKL 733 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~ 733 (885)
.|++.+.||+|++|.||+|... +++.||+|.+.... ......+.+|++++++++||+|+++++++.+. ...+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 5899999999999999999865 48899999875321 22335788999999999999999999988654 4678
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
++|||+++++|.+++.... .+++..+..++.|++.|+.||| +.|++|+|++|+||+++.++.++++|||.+.....
T Consensus 83 ~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 83 IFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred EEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 9999999999999987544 3788899999999999999999 99999999999999999999999999999876532
Q ss_pred CCC--CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CES--HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... .......++..|+|||+..+..++.++|+||+||++|++++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 211 (264)
T cd06653 159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAE 211 (264)
T ss_pred ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence 111 111234578899999999998899999999999999999999999863
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=256.19 Aligned_cols=199 Identities=24% Similarity=0.311 Sum_probs=171.8
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.+.||+|++|.||+|.+. +++.||+|++..... .....+.+|++++++++|+||+++++++..++..+++|||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 6899999999999999999876 478899998865432 2346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++.+..+.. ....+++..+..++.|++.+++||| +.+++|+|++|+||++++++.++++|||.+..........
T Consensus 82 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 157 (288)
T cd07833 82 VERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASP 157 (288)
T ss_pred CCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc
Confidence 98866665554 3445899999999999999999999 8999999999999999999999999999988765533323
Q ss_pred ccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||++.+. .++.++|+||+|+++|+|++|+.||..
T Consensus 158 ~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~ 204 (288)
T cd07833 158 LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPG 204 (288)
T ss_pred ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 3345678889999999888 789999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=251.03 Aligned_cols=199 Identities=23% Similarity=0.293 Sum_probs=170.3
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEe-CCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSV-GEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e 737 (885)
.|++.+.||+|++|.||.|... +++.||+|++.... ....+.+.+|++++++++||+++++++.+.. +...+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 3899999999999999999865 47889999986433 2234568899999999999999999988764 446789999
Q ss_pred cccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 738 YMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|++++++.+++... ...+++..+..++.+++.+++++| +.|++||||+|+||+++.++.++++|||.+..+....
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 99999999998753 345899999999999999999999 9999999999999999999999999999987664322
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.......++..|+|||+..+..++.++|+||+|+++|++++|+.||..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~ 204 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNA 204 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 222334578899999999999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=253.56 Aligned_cols=201 Identities=28% Similarity=0.487 Sum_probs=170.2
Q ss_pred eEEeecceecccCCceEEEEEeCC-C---CeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-Q---KTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~---~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..|+..+.||+|++|.||+|.... + ..+|+|++.... ....+++..|++++++++|||++++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 457889999999999999998653 3 368899886543 22345788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|.+++......+++..+..++.|++.|++|+| +.+++|||+||+||++++++.++++|||.+.......
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 9999999999999866566899999999999999999999 9999999999999999999999999999987664322
Q ss_pred CCccc--CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 816 SHVST--DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 816 ~~~~~--~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
..... ....+..|+|||++.+..++.++||||+||++||+++ |+.||..
T Consensus 162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~ 213 (268)
T cd05063 162 EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWD 213 (268)
T ss_pred ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCc
Confidence 21111 1223457999999998899999999999999999997 9999854
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-28 Score=261.82 Aligned_cols=195 Identities=23% Similarity=0.317 Sum_probs=159.4
Q ss_pred cceecccCCceEEEEEeCC---CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe--CCeeEEEEeccc
Q 047790 666 ENVIGGGGFRTAFKGTMPD---QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV--GEEKLLVYEYMV 740 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~---~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~ 740 (885)
+.+||+|+||.||+|+..+ ++.||+|.+.... ....+.+|+++++.++||||+++++++.. +...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 4689999999999998653 5789999886543 23567889999999999999999998853 457789999985
Q ss_pred CCCHHHHHhh--------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE----cCCCcEEEeeccCc
Q 047790 741 NGSLDDWLRN--------RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL----NDYFEAKVSDFGLA 808 (885)
Q Consensus 741 ~~sL~~~l~~--------~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~----~~~~~vkl~Dfg~a 808 (885)
+++.+++.. ....+++..+..++.|++.|++||| +.+|+||||||+||++ +..+.+||+|||.+
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 588777652 1224788899999999999999999 9999999999999999 45678999999999
Q ss_pred ccccCCCCC--cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 809 RLISDCESH--VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 809 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
+.+...... ......++..|+|||++.+ ..++.++||||+||++|||+||+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 876543221 1223457889999999876 457899999999999999999999997543
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-29 Score=253.61 Aligned_cols=206 Identities=24% Similarity=0.262 Sum_probs=175.1
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccc---cHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ---CDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~ 733 (885)
-..+|.+..+||+|+||.|..|..+. .+.+|+|++++...- +.+--..|-+++..-. -|..++++..|...++.|
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 34578899999999999999998765 667999999876522 2233456777776554 588999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
.||||+.||+|--.++.- +.+-++.+..+|..|+-+|-+|| ++||++||+|-+||+++.+|++||+|||.++.---
T Consensus 427 FVMEyvnGGDLMyhiQQ~-GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQV-GKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred eEEEEecCchhhhHHHHh-cccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 999999999998888744 44888899999999999999999 99999999999999999999999999999875322
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~~ 869 (885)
+.......+||+.|+|||++...+|+.+.|.||+||++|||+.|.+||+++.+++
T Consensus 503 -~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e 557 (683)
T KOG0696|consen 503 -DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE 557 (683)
T ss_pred -CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence 2334456789999999999999999999999999999999999999998765554
|
|
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-28 Score=259.05 Aligned_cols=200 Identities=30% Similarity=0.469 Sum_probs=167.8
Q ss_pred EEeecceecccCCceEEEEEeC------CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
+|++.+.||+|+||.||+|... ....+++|.+..... ....++.+|++++++++||||+++++.+..++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 3788999999999999999753 235688888865443 234578899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhc-----------------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCc
Q 047790 735 VYEYMVNGSLDDWLRNR-----------------------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSN 791 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~-----------------------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~N 791 (885)
+|||+.+++|.+++... ...+++..+..++.|++.+++||| +.+++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhhe
Confidence 99999999999988642 123778899999999999999999 9999999999999
Q ss_pred EEEcCCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 792 ILLNDYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 792 il~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
|++++++.++++|||.++........ ......++..|+|||+..+..++.++||||||+++|||++ |..||..
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999998765432211 1122345678999999998899999999999999999998 9999864
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=260.83 Aligned_cols=201 Identities=22% Similarity=0.228 Sum_probs=173.1
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+|++.+.||+|++|.||+|...+ ++.||+|.+...... ....+..|+++++.++||+|+++++.+......++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 58899999999999999998765 899999998764422 34568899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 738 YMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|+.+++|.+++... ...+++..+..++.|++++++||| +.|++||||||+||+++.++.++++|||.+........
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP 158 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence 99999999998753 345899999999999999999999 99999999999999999999999999998875432111
Q ss_pred C----------------------------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 H----------------------------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ......++..|+|||+..+..++.++||||+|+++|++++|+.||...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 0 111234678899999999999999999999999999999999999643
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=258.24 Aligned_cols=197 Identities=24% Similarity=0.384 Sum_probs=170.8
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.|+..+.||+|+||.||+|.+. +++.||+|.+.... ....+.+.+|++++++++||||+++++++..+...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4677889999999999999765 47789999886443 233457889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+++++.+++.. ..+++..+..++.|++.++.|+| +.+++|+||+|+||++++++.++++|||.+....... ...
T Consensus 85 ~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~ 158 (277)
T cd06642 85 GGGSALDLLKP--GPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKR 158 (277)
T ss_pred CCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcc-hhh
Confidence 99999998864 34889999999999999999999 8999999999999999999999999999987654322 112
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....++..|+|||++.+..++.++|+|||||++|||++|+.||..
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 203 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSD 203 (277)
T ss_pred hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcc
Confidence 234578889999999998999999999999999999999999864
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=256.60 Aligned_cols=198 Identities=26% Similarity=0.332 Sum_probs=169.6
Q ss_pred EeecceecccCCceEEEEEe----CCCCeEEEEEecccc----cccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeE
Q 047790 663 IVFENVIGGGGFRTAFKGTM----PDQKTVAVKKLSQAT----GQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~----~~~~~valK~~~~~~----~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~ 733 (885)
|++.+.||+|+||.||.|+. .+|+.||+|.+.... ....+++.+|++++++++ |++|+++++.+..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 78899999999999999976 368899999987532 223467888999999994 899999999999889999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++... ..+++..+..++.|++.|++|+| +.|++||||+|+||+++.++.++++|||.+.....
T Consensus 82 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 82 LILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred EEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence 999999999999998754 34888999999999999999999 99999999999999999999999999999877644
Q ss_pred CCCCcccCCCCCCccCCcccccCC--CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAG--RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..........++..|+|||...+. .++.++||||+|+++|++++|+.||..
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 210 (290)
T cd05613 158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTV 210 (290)
T ss_pred ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCc
Confidence 322222344578899999998753 467899999999999999999999863
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=254.63 Aligned_cols=192 Identities=25% Similarity=0.328 Sum_probs=165.5
Q ss_pred ecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCH
Q 047790 669 IGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSL 744 (885)
Q Consensus 669 lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL 744 (885)
||+|+||.||+|... +++.||+|.+.... ......+..|++++++++||+|+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999765 58899999986532 12234567899999999999999999999999999999999999999
Q ss_pred HHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCC
Q 047790 745 DDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA 823 (885)
Q Consensus 745 ~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~ 823 (885)
.+++.... ..+++..+..++.|++.++.|+| +.|++||||+|+||++++++.++++|||.+..... ........
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG--GKKIKGRA 155 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc--CCcccccc
Confidence 99987543 35899999999999999999999 99999999999999999999999999998876543 12222345
Q ss_pred CCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 824 DTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 824 ~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
++..|+|||+..+..++.++|+||+||++|+|++|+.||...
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 197 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQR 197 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCC
Confidence 778899999998888999999999999999999999999654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=254.62 Aligned_cols=201 Identities=26% Similarity=0.454 Sum_probs=169.8
Q ss_pred eEEeecceecccCCceEEEEEeCC------CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
.+|++.+.||+|+||.||+|...+ ++.||+|.+..... .....+.+|+++++.++||||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 468899999999999999997643 46799999865432 23456889999999999999999999999899999
Q ss_pred EEEecccCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEee
Q 047790 734 LVYEYMVNGSLDDWLRNRA---------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSD 804 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~---------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~D 804 (885)
+||||+++++|.+++.... ..+++..+..++.|++.|++|+| +.+++||||||+||+++.++.++++|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEECC
Confidence 9999999999999986422 23678889999999999999999 99999999999999999999999999
Q ss_pred ccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 805 FGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 805 fg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
||.++.+..... .......++..|+|||...+..++.++|||||||++||+++ |..||..
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 224 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQG 224 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCcc
Confidence 999876543221 12223345778999999988889999999999999999998 9999853
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=251.05 Aligned_cols=199 Identities=24% Similarity=0.311 Sum_probs=172.3
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.+.||+|+||.+|.+... +++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4889999999999999999764 58889999986532 22345788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 739 MVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
+.+++|.+++... ...+++..+..++.|++.+++|+| +.+++|+|++|+||+++.++.++++|||.+..+.... .
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-~ 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-E 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-h
Confidence 9999999988753 335788999999999999999999 8999999999999999999999999999987664321 1
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......++..|+|||+..+..++.++|+||+||++|++++|+.||..
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~ 203 (256)
T cd08218 157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEA 203 (256)
T ss_pred hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccC
Confidence 12233577889999999988899999999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=261.18 Aligned_cols=214 Identities=23% Similarity=0.275 Sum_probs=181.1
Q ss_pred eEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..|...+.||-|+||.|-.++-.| ...||+|.+.+.. .....+...|-.||.....+.|+++|-.|.+++..|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 347778999999999999997544 5668999987654 234567888999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc-----
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI----- 811 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~----- 811 (885)
+|++||++-+++.+.+. +++..++.++..+..|+++.| ..|+|||||||+||++|.+|++||+|||+++-+
T Consensus 709 dYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd 784 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 784 (1034)
T ss_pred eccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccceeccc
Confidence 99999999998886554 888999999999999999999 999999999999999999999999999997422
Q ss_pred ----cCCC-----C---------------------------CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHH
Q 047790 812 ----SDCE-----S---------------------------HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLEL 855 (885)
Q Consensus 812 ----~~~~-----~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~el 855 (885)
...+ . -......||+.|+|||++...+++..+|.||.|||+|||
T Consensus 785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em 864 (1034)
T KOG0608|consen 785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM 864 (1034)
T ss_pred cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence 1000 0 000112389999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCCCHHHHH
Q 047790 856 VTGKQPTGPEFEDKDGGNLVDWV 878 (885)
Q Consensus 856 ltg~~P~~~~~~~~~~~~l~~~~ 878 (885)
+.|+.||....+.+...++..|-
T Consensus 865 ~~g~~pf~~~tp~~tq~kv~nw~ 887 (1034)
T KOG0608|consen 865 LVGQPPFLADTPGETQYKVINWR 887 (1034)
T ss_pred hhCCCCccCCCCCcceeeeeehh
Confidence 99999999888888777776663
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.8e-28 Score=256.94 Aligned_cols=200 Identities=23% Similarity=0.319 Sum_probs=173.0
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+|++.+.||+|++|.||+|.+. +++.||+|++.... .....++.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46889999999999999999875 48889999876543 23356788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++... +.+++..+..++.+++.++.|||+ ..+++||||+|+||++++++.++++|||.+...... .
T Consensus 85 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~---~ 158 (284)
T cd06620 85 MDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS---I 158 (284)
T ss_pred CCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh---c
Confidence 9999999988754 358999999999999999999993 258999999999999999999999999988654321 1
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.....++..|+|||++.+..++.++|+||+||++|++++|+.||....
T Consensus 159 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~ 206 (284)
T cd06620 159 ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSN 206 (284)
T ss_pred cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence 123467889999999988899999999999999999999999998544
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-28 Score=254.59 Aligned_cols=198 Identities=28% Similarity=0.396 Sum_probs=174.5
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
+|++.+.||+|++|.||+|.+. +++.+|+|.+.... .....++.+|++++++++||||+++++++..+...++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5788999999999999999876 58889999887643 233457889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++|.+++......+++..+..++.|++++++|+| + .+++|+||+|+||++++++.++++|||.+.........
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~- 157 (265)
T cd06605 82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK- 157 (265)
T ss_pred CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh-
Confidence 999999999865466899999999999999999999 8 99999999999999999999999999998765432211
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...++..|+|||+..+..++.++||||+|+++|++++|+.||...
T Consensus 158 --~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 202 (265)
T cd06605 158 --TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPE 202 (265)
T ss_pred --cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 256788999999999999999999999999999999999999754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-28 Score=257.99 Aligned_cols=198 Identities=23% Similarity=0.394 Sum_probs=169.1
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.|++.+.||+|+||.||+|.+. .++.||+|.+.... ......+.+|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5889999999999999999876 68899999886542 223457889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 740 VNGSLDDWLRNR--AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 740 ~~~sL~~~l~~~--~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
++++|.+++... ...+++..+..++.|++.++.|||. +.+++||||||+||+++.++.++++|||.+..+...
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 156 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--- 156 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC---
Confidence 999999988753 2358999999999999999999993 259999999999999999999999999998765432
Q ss_pred cccCCCCCCccCCcccccCC------CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAG------RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......++..|+|||+..+. .++.++|+||+||++|+|++|+.||..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 209 (286)
T cd06622 157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPP 209 (286)
T ss_pred ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence 22234577889999988554 347899999999999999999999964
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=253.03 Aligned_cols=199 Identities=23% Similarity=0.317 Sum_probs=168.7
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-----ccHHHHHHHHHHhcccCCCCccceeeeeEe--CCeeE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-----QCDREFAAEMETLDMVKHQNLVQLLGYCSV--GEEKL 733 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~~ 733 (885)
.|++.+.||+|+||.||+|... .++.||+|++..... .....+.+|++++++++||||+++++++.+ +...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 4888999999999999999875 488999998864321 223468889999999999999999998865 35778
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
++|||+++++|.+++.... .+++..+..++.|++.+++||| +.+++|||++|+||+++.++.++++|||.+.....
T Consensus 83 l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 9999999999999987543 4788999999999999999999 99999999999999999999999999999876532
Q ss_pred CCC--CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CES--HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... .......++..|+|||++.+..++.++|+||+||++||+++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~ 211 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE 211 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccc
Confidence 111 111223478889999999998999999999999999999999999964
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=258.66 Aligned_cols=202 Identities=27% Similarity=0.448 Sum_probs=170.6
Q ss_pred eeEEeecceecccCCceEEEEEeC------CCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~ 731 (885)
..+|++.+.||+|+||.||+|... .+..+|+|.++.... ...+.+.+|+++++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 356999999999999999999642 355799998875432 2345788999999999 79999999999998899
Q ss_pred eEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.+++|||+.+++|.+++.... ..+++.++..++.|++.+++|+| +.+++|+||||+||+++.++.++++|||.+..
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence 999999999999999987533 33799999999999999999999 89999999999999999999999999999876
Q ss_pred ccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 811 ISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 811 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....... ......++..|+|||++.+..++.++||||+||++||+++ |..||..
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~ 246 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPG 246 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCC
Confidence 5432211 1122345678999999999999999999999999999998 9999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=251.76 Aligned_cols=194 Identities=26% Similarity=0.385 Sum_probs=166.1
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCHH
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLD 745 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~ 745 (885)
..||+|+||.||+|.+. ++..||+|.+........+.+.+|++++++++|+||+++++++..++..+++|||+++++|.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS 93 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence 57999999999999865 57789999887665555678899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCC--CHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-CCcEEEeeccCcccccCCCCCcccCC
Q 047790 746 DWLRNRAASL--DWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-YFEAKVSDFGLARLISDCESHVSTDT 822 (885)
Q Consensus 746 ~~l~~~~~~~--~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~~ 822 (885)
+++....... +...+..++.|++.|++||| +.||+|||+||+||+++. .+.++|+|||.+..+.... ......
T Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~-~~~~~~ 169 (268)
T cd06624 94 ALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN-PCTETF 169 (268)
T ss_pred HHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC-CccccC
Confidence 9998654445 78888999999999999999 999999999999999975 6789999999987654322 122234
Q ss_pred CCCCccCCcccccCC--CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 823 ADTIGYVPSEYGQAG--RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 823 ~~~~~y~aPE~~~~~--~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.++..|+|||+..+. .++.++|+||+|+++|++++|+.||..
T Consensus 170 ~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 170 TGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred CCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 578899999998664 478899999999999999999999864
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=253.35 Aligned_cols=198 Identities=21% Similarity=0.373 Sum_probs=170.1
Q ss_pred EeecceecccCCceEEEEEe-CCCCeEEEEEeccccc------ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 663 IVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATG------QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
|+.++.||+|++|.||+|.. .+++.+|+|.+..... .....+.+|++++++++|||++++++++.+.+..++|
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v 81 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF 81 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence 78889999999999999985 4588999999864331 1235788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-cEEEeeccCcccccCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-EAKVSDFGLARLISDC 814 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-~vkl~Dfg~a~~~~~~ 814 (885)
|||+++++|.+++.... .+++..+..++.|++.|++||| +.|++|+||+|+||+++.++ .++++|||.+..+...
T Consensus 82 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 82 VEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 99999999999987543 5889999999999999999999 99999999999999998765 5899999998776543
Q ss_pred CCC---cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESH---VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... ......++..|+|||+..+..++.++|+||+|+++|++++|+.||..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 210 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNA 210 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 211 11223577899999999888899999999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-28 Score=256.01 Aligned_cols=202 Identities=29% Similarity=0.425 Sum_probs=167.7
Q ss_pred eEEeecceecccCCceEEEEEeCC------CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
..|++.+.||+|++|.||+|.+.+ +..||+|.+..... .....+.+|+.++++++|+||+++++++.+....+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF 85 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence 458899999999999999998753 56788888764432 23456889999999999999999999998888899
Q ss_pred EEEecccCCCHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC---cEEEee
Q 047790 734 LVYEYMVNGSLDDWLRNRA------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF---EAKVSD 804 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~---~vkl~D 804 (885)
+||||+++++|.+++.... ..+++..+..++.|++.+++||| +.+++||||||+||+++..+ .+|++|
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEecc
Confidence 9999999999999987532 24888999999999999999999 89999999999999998654 589999
Q ss_pred ccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 805 FGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 805 fg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
||.++.+...... .......+..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~ 225 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGR 225 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999876332111 1112233567999999999999999999999999999997 99998643
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=251.05 Aligned_cols=199 Identities=29% Similarity=0.396 Sum_probs=176.1
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.|++.+.||+|++|.||+|...+ ++.|++|++..... .....+.+|++++++++||+++++++++......++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 47889999999999999998765 89999999876543 34567899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++|.+++... ..+++..+..++.|++++++++| + .+++|||++|+||+++.++.++++|||.+..+......
T Consensus 82 ~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~- 156 (264)
T cd06623 82 DGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ- 156 (264)
T ss_pred CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc-
Confidence 999999999855 45899999999999999999999 8 99999999999999999999999999998876542222
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||...+..++.++|+||||+++|++++|+.||...
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 203 (264)
T cd06623 157 CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPP 203 (264)
T ss_pred ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 22345788999999999999999999999999999999999998655
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=254.98 Aligned_cols=197 Identities=28% Similarity=0.427 Sum_probs=166.4
Q ss_pred EeecceecccCCceEEEEEe-----CCCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeEE
Q 047790 663 IVFENVIGGGGFRTAFKGTM-----PDQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKLL 734 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~-----~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~l 734 (885)
|++.+.||+|+||.||.+.. .+++.||+|.+..... .....+.+|+++++.++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 48999999999999988642 3577899999876432 2346788999999999999999999987653 46789
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
+|||+++++|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||++++++.++++|||.+..+...
T Consensus 86 v~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 160 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160 (283)
T ss_pred EecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence 99999999999999753 4899999999999999999999 999999999999999999999999999998876542
Q ss_pred CCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... ......++..|+|||+..+..++.++||||||+++|||++|+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~ 212 (283)
T cd05080 161 HEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQS 212 (283)
T ss_pred chhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCC
Confidence 211 11223456679999999888899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=254.93 Aligned_cols=199 Identities=24% Similarity=0.382 Sum_probs=168.2
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeC------Cee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVG------EEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~------~~~ 732 (885)
++|++.+.||+|+||.||+|... +++.||+|.+.... .....+..|+.+++++ +||||+++++++... ...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 56889999999999999999865 47889999886543 3356788999999988 699999999988653 467
Q ss_pred EEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 733 LLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
+++|||+++++|.+++... ...+++..+..++.|++.+++||| +.+|+|+|++|+||++++++.++++|||.+...
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 8999999999999998853 345889999999999999999999 899999999999999999999999999998765
Q ss_pred cCCCCCcccCCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.... .......++..|+|||++. +..++.++||||+||++|||++|+.||..
T Consensus 162 ~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~ 218 (272)
T cd06637 162 DRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 218 (272)
T ss_pred cccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 4321 2223356788999999876 34578899999999999999999999863
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=249.66 Aligned_cols=194 Identities=28% Similarity=0.472 Sum_probs=163.7
Q ss_pred ceecccCCceEEEEEeCC----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
++||+|+||.||+|.+.. +..+|+|.+..... ...+++.+|+++++++.||+|+++++++. ....++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 579999999999997533 36899999876543 23567889999999999999999999876 4567999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc-
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST- 820 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~- 820 (885)
++|.+++.... .+++..+..++.|++.++++|| ..+++||||||+||+++.++.++++|||.+............
T Consensus 80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 99999998654 5899999999999999999999 899999999999999999999999999998876443222211
Q ss_pred -CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 821 -DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 821 -~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
...++..|+|||...+..++.++|+|||||++|++++ |+.||...
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~ 202 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEM 202 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccC
Confidence 1123467999999999999999999999999999998 99998653
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-28 Score=258.73 Aligned_cols=202 Identities=24% Similarity=0.433 Sum_probs=168.0
Q ss_pred eEEeecceecccCCceEEEEEeC-----------------CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccce
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-----------------DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQL 722 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-----------------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~ 722 (885)
.+|++.++||+|+||.||+|++. +...+|+|.+..... ....++.+|+++++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46999999999999999998543 234688998875432 234678899999999999999999
Q ss_pred eeeeEeCCeeEEEEecccCCCHHHHHhhcC----------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcE
Q 047790 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRA----------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNI 792 (885)
Q Consensus 723 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Ni 792 (885)
++++..++..+++|||+++++|.+++.... ..+++..+..++.|++.|++||| +.|++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChheE
Confidence 999999999999999999999999987532 23667789999999999999999 99999999999999
Q ss_pred EEcCCCcEEEeeccCcccccCCCCCc-ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh--CCCCCCCC
Q 047790 793 LLNDYFEAKVSDFGLARLISDCESHV-STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT--GKQPTGPE 865 (885)
Q Consensus 793 l~~~~~~vkl~Dfg~a~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt--g~~P~~~~ 865 (885)
+++.++.++++|||.+..+....... ......+..|+|||+..+..++.++|+|||||++|||++ |..||...
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 99999999999999987654322111 112234568999999888889999999999999999998 77888643
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=258.79 Aligned_cols=201 Identities=29% Similarity=0.474 Sum_probs=167.7
Q ss_pred eEEeecceecccCCceEEEEEeCC--------CCeEEEEEecccc-cccHHHHHHHHHHhccc-CCCCccceeeeeEeCC
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD--------QKTVAVKKLSQAT-GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGE 730 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~--------~~~valK~~~~~~-~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~ 730 (885)
.+|.+.+.||+|+||.||+|.+.. ...+|+|.+.... .....++..|+++++.+ +||||+++++++..++
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 569999999999999999997532 3469999987543 22345688899999999 7999999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~ 795 (885)
..++||||+++++|.+++..+. ..+++..+..++.|++.|++|+| +.|++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEEc
Confidence 9999999999999999997532 23788899999999999999999 89999999999999999
Q ss_pred CCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 796 DYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 796 ~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.++.++++|||.+......... .......+..|+|||+..+..++.++||||+||++|||++ |..||..
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~ 245 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 245 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCc
Confidence 9999999999998765431111 1111223468999999999889999999999999999998 8888753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-28 Score=278.00 Aligned_cols=200 Identities=19% Similarity=0.226 Sum_probs=159.7
Q ss_pred eeeEEeecceecccCCceEEEEEeCC--CCeEEEEE--------------ecc---cccccHHHHHHHHHHhcccCCCCc
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD--QKTVAVKK--------------LSQ---ATGQCDREFAAEMETLDMVKHQNL 719 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~--~~~valK~--------------~~~---~~~~~~~~~~~E~~~l~~l~~~~i 719 (885)
...+|++.++||+|+||.||++..+. +..++.|. +.+ ........+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 34679999999999999999986532 22222221 111 111223467899999999999999
Q ss_pred cceeeeeEeCCeeEEEEecccCCCHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc
Q 047790 720 VQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRA----ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795 (885)
Q Consensus 720 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~ 795 (885)
+++++++...+..|+|++++. +++.+++.... .......+..++.|++.|++||| +.||+||||||+||+++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEC
Confidence 999999999999999999994 57777664321 22345667889999999999999 99999999999999999
Q ss_pred CCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 047790 796 DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 796 ~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~ 862 (885)
.++.+||+|||++..+............|+..|+|||++.+..++.++||||+||++|||++|..|+
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 9999999999999877654333334467899999999999999999999999999999999988654
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=250.57 Aligned_cols=189 Identities=25% Similarity=0.442 Sum_probs=160.6
Q ss_pred ceecccCCceEEEEEeCCCC-----------eEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 667 NVIGGGGFRTAFKGTMPDQK-----------TVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~-----------~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+.||+|+||.||+|...+.. .+++|.+...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 47899999999999876533 4677776544333 6788899999999999999999999887 778999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-------cEEEeeccCc
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-------EAKVSDFGLA 808 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-------~vkl~Dfg~a 808 (885)
|||+++++|.+++......+++..+..++.|++.|++||| +++|+||||||+||+++.++ .++++|||.+
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 9999999999999865546899999999999999999999 99999999999999999877 7999999998
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCC--CCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAG--RANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
..... .....++..|+|||++.+. .++.++|+||+||++|++++ |..||...
T Consensus 156 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~ 210 (259)
T cd05037 156 ITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTL 210 (259)
T ss_pred ccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccC
Confidence 76543 1223456679999998877 78999999999999999999 57777654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-28 Score=238.44 Aligned_cols=201 Identities=22% Similarity=0.358 Sum_probs=170.6
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccc-cHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ-CDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 736 (885)
+...++...||.|..|.||+++++. |...|||.+.+.... ..+++...++++..-. +|+|++++++|..+...++-|
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcM 170 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICM 170 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHH
Confidence 4456677899999999999998765 888999999876533 3457777788776655 899999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|.| ...++..+..-.+++++..+-++...+..||.||.. +.||+|||+||.||++|+.|++|++|||.+-++-++
T Consensus 171 elM-s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS-- 245 (391)
T KOG0983|consen 171 ELM-STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS-- 245 (391)
T ss_pred HHH-HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecc--
Confidence 988 446677776666678999999999999999999986 789999999999999999999999999999887653
Q ss_pred CcccCCCCCCccCCcccccCC---CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAG---RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+.....|-+.|||||.+... +|+.++||||||+.++|+.||..||.+.
T Consensus 246 kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c 297 (391)
T KOG0983|consen 246 KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGC 297 (391)
T ss_pred cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCC
Confidence 344556788999999988764 6899999999999999999999999863
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=250.73 Aligned_cols=194 Identities=29% Similarity=0.456 Sum_probs=166.0
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeE-eCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCS-VGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~ 739 (885)
.+|++.+.||+|+||.||+|... +..+|+|.+.... ..+.+.+|+.++++++|++++++++++. .+...+++|||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46889999999999999999764 6779999886432 3457889999999999999999999764 456789999999
Q ss_pred cCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++|.+++.... ..+++..+..++.|++.+++||| +.|++||||||+||++++++.+|++|||.+.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 9999999987543 34788999999999999999999 9999999999999999999999999999987643311
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.....+..|+|||+..+..++.++||||+||++|+|++ |+.||..
T Consensus 157 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~ 202 (256)
T cd05082 157 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 202 (256)
T ss_pred -CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 22234568999999999899999999999999999997 9999853
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=255.31 Aligned_cols=202 Identities=27% Similarity=0.425 Sum_probs=171.1
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CC----eEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QK----TVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~----~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
..+|++.+.||+|+||.||+|.+.+ ++ .+|+|....... .....+.+|++++++++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 3568999999999999999998643 32 588888765543 234678899999999999999999999886 7889
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||.+.....
T Consensus 85 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 999999999999999876666899999999999999999999 89999999999999999999999999999987653
Q ss_pred CCCCcc-cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 814 CESHVS-TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
...... .....+..|+|||......++.++|+||+|+++||+++ |+.||...
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 215 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI 215 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 222211 11223567999999988899999999999999999998 99998753
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-28 Score=258.93 Aligned_cols=201 Identities=25% Similarity=0.435 Sum_probs=167.6
Q ss_pred eEEeecceecccCCceEEEEEeCC---------------CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD---------------QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLG 724 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~---------------~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~ 724 (885)
.+|++.++||+|+||.||+|..++ ...||+|.++.... .....+.+|++++++++||+++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 479999999999999999987543 22488998875432 23456889999999999999999999
Q ss_pred eeEeCCeeEEEEecccCCCHHHHHhhcC-----------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEE
Q 047790 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRA-----------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNIL 793 (885)
Q Consensus 725 ~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil 793 (885)
++..+...++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhEE
Confidence 9999999999999999999999986432 13678889999999999999999 999999999999999
Q ss_pred EcCCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh--CCCCCCC
Q 047790 794 LNDYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT--GKQPTGP 864 (885)
Q Consensus 794 ~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt--g~~P~~~ 864 (885)
+++++.+|++|||.+......... ......++..|+|||+..+..++.++|+|||||++|+|++ |..||..
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 999999999999998765432211 1122234678999999998899999999999999999998 6677764
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=256.13 Aligned_cols=199 Identities=27% Similarity=0.380 Sum_probs=173.7
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.+|.+.+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++......++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57999999999999999999754 57889999986544444567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++... .+++..+..++.|++.+++||| +.|++|+|++|+||+++.++.++|+|||.+......... .
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~-~ 172 (293)
T cd06647 99 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-R 172 (293)
T ss_pred CCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccc-c
Confidence 999999998753 3788899999999999999999 999999999999999999999999999988765432221 2
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....++..|+|||+..+..++.++|+|||||++|++++|+.||...
T Consensus 173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~ 218 (293)
T cd06647 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE 218 (293)
T ss_pred ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2335778899999998888999999999999999999999999743
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=251.93 Aligned_cols=190 Identities=24% Similarity=0.360 Sum_probs=159.9
Q ss_pred ceecccCCceEEEEEeCC-------------CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 667 NVIGGGGFRTAFKGTMPD-------------QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~-------------~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
+.||+|+||.||+|.... ...|++|.+..........+.+|+.++++++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999997432 2357888876544444567888999999999999999999999888999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc-------EEEeecc
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE-------AKVSDFG 806 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~-------vkl~Dfg 806 (885)
+||||++++++..++..+...+++..+..++.|+++|++||| +.+|+||||||+||+++.++. ++++|||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 999999999999998766566899999999999999999999 999999999999999986554 8999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCccccc-CCCCCCcchhHHHHHHHHHHH-hCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQ-AGRANERGDIYSFGVILLELV-TGKQPTGP 864 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslGvvl~ell-tg~~P~~~ 864 (885)
.+...... ....++..|+|||++. +..++.++|||||||++|||+ +|+.||..
T Consensus 158 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~ 212 (262)
T cd05077 158 IPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKD 212 (262)
T ss_pred CCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 88654321 1234677899999887 467889999999999999997 58888764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=252.23 Aligned_cols=193 Identities=30% Similarity=0.482 Sum_probs=160.4
Q ss_pred ceecccCCceEEEEEeCC-CC--eEEEEEecccc-cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMPD-QK--TVAVKKLSQAT-GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~-~~--~valK~~~~~~-~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
+.||+|+||.||+|...+ +. .+++|.++... ....+.+.+|+++++++ .||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999998754 33 46788876533 23346788999999999 799999999999998899999999999
Q ss_pred CCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeecc
Q 047790 742 GSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFG 806 (885)
Q Consensus 742 ~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg 806 (885)
++|.+++.... ..+++..+..++.|++.|++|+| +.|++||||||+||++++++.++++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCC
Confidence 99999987432 23788999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
++...... ........+..|+|||+..+..++.++|+|||||++|||++ |..||..
T Consensus 158 l~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~ 214 (270)
T cd05047 158 LSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 214 (270)
T ss_pred Cccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 87532211 11111223567999999988899999999999999999997 9999854
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=256.88 Aligned_cols=201 Identities=31% Similarity=0.500 Sum_probs=169.4
Q ss_pred eEEeecceecccCCceEEEEEeCC------CCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
.+|++.+.||+|+||.||+|...+ ...+|+|.+..... ....++.+|+++++++ +||||+++++++..++..
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 91 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL 91 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence 568899999999999999997643 35789998875432 2335688999999999 799999999999988999
Q ss_pred EEEEecccCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC
Q 047790 733 LLVYEYMVNGSLDDWLRNR---------------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY 797 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~---------------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~ 797 (885)
+++|||+++++|.++++.+ ...+++..+..++.|++.|++||| +.+|+||||||+||+++++
T Consensus 92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTED 168 (293)
T ss_pred EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEcCC
Confidence 9999999999999998642 345889999999999999999999 9999999999999999999
Q ss_pred CcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 798 FEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 798 ~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+.++++|||.++.+...... ......++..|+|||+..+..++.++|||||||++||+++ |..||..
T Consensus 169 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 237 (293)
T cd05053 169 HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 237 (293)
T ss_pred CeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCC
Confidence 99999999999876542211 1122234567999999999999999999999999999998 8888864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-28 Score=257.90 Aligned_cols=202 Identities=26% Similarity=0.428 Sum_probs=169.1
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
.+|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|+.++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 35788999999999999999753 3578999998754322 2356889999999999999999999999889999
Q ss_pred EEEecccCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC
Q 047790 734 LVYEYMVNGSLDDWLRNR---------------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~---------------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~ 798 (885)
+++||+.+++|.+++..+ ...+++..+..++.|++.|++|+| +.|++||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCC
Confidence 999999999999998532 123788889999999999999999 99999999999999999999
Q ss_pred cEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 799 EAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 799 ~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.+|++|||.++....... .......+++.|+|||++.+..++.++||||+||++|||++ |..||.+.
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 230 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 230 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999876543221 11222345678999999988889999999999999999998 88888653
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=252.40 Aligned_cols=198 Identities=24% Similarity=0.406 Sum_probs=162.9
Q ss_pred eecceecccCCceEEEEEeCCCC---eEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC------Cee
Q 047790 664 VFENVIGGGGFRTAFKGTMPDQK---TVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG------EEK 732 (885)
Q Consensus 664 ~~~~~lG~G~~g~vy~a~~~~~~---~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~------~~~ 732 (885)
.++++||+|+||.||+|.+.+.. .+|+|.++... ....+.+.+|+++++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 56899999999999999875533 58899876542 22346788899999999999999999976432 246
Q ss_pred EEEEecccCCCHHHHHhh-----cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 733 LLVYEYMVNGSLDDWLRN-----RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~-----~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
+++|||+++++|.+++.. ....+++..+..++.|++.|++||| +.+|+||||||+||++++++.++++|||.
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCc
Confidence 899999999999988742 2234789999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 808 ARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 808 a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+..+...... .......+..|+|||+..+..++.++||||+|+++||+++ |+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 217 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPG 217 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 9876542211 1122345678999999999999999999999999999999 8888864
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=253.60 Aligned_cols=201 Identities=25% Similarity=0.408 Sum_probs=169.4
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
.+|++.+.||+|+||.||+|+.+ +.+.+++|.+...... ..+.+.+|++++++++||+|+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 35788999999999999999854 3567889987654433 3467899999999999999999999999888999
Q ss_pred EEEecccCCCHHHHHhhcC--------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeec
Q 047790 734 LVYEYMVNGSLDDWLRNRA--------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDF 805 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~--------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Df 805 (885)
+||||+++++|.+++.... ..+++..+..++.|++.+++||| +.+|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999987533 14899999999999999999999 999999999999999999999999999
Q ss_pred cCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 806 GLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 806 g~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
|.+...............++..|+|||...+..++.++||||+|+++|++++ |..||..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~ 221 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYG 221 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 9886543222222223345677999999988888999999999999999998 7888854
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=257.18 Aligned_cols=202 Identities=27% Similarity=0.472 Sum_probs=169.3
Q ss_pred eeEEeecceecccCCceEEEEEeC--------CCCeEEEEEecccc-cccHHHHHHHHHHhccc-CCCCccceeeeeEeC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP--------DQKTVAVKKLSQAT-GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVG 729 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~--------~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 729 (885)
..+|++.+.||+|+||.||+|++. ++..||+|.+.... .....++.+|+.+++.+ +||||+++++++..+
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456889999999999999999642 24468999886543 23346788999999999 799999999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL 794 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~ 794 (885)
...+++|||+++++|.+++..+. ..+++..+..++.|+++|++||| +.|++||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEEE
Confidence 99999999999999999987532 23678889999999999999999 8999999999999999
Q ss_pred cCCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 795 NDYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 795 ~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+.++.++++|||.+......... ......++..|+|||+..+..++.++||||||+++|++++ |..||..
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 242 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 242 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 99999999999999876542221 1222345678999999998889999999999999999998 7888753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=250.99 Aligned_cols=198 Identities=25% Similarity=0.357 Sum_probs=171.8
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-----cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-----GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+|+..+.||+|++|.||+|... +++.|++|.+.... ....+.+.+|+++++.++||+|+++++++..+...+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4778899999999999999876 68999999886433 12345788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|.+++.... .+++..+..++.|++++++++| +.|++|+||+|+||+++.++.+|++|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 99999999999997543 4889999999999999999999 9999999999999999999999999999887654322
Q ss_pred CCcccCCCCCCccCCcccccCCC-CCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGR-ANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||...... ++.++|+||+|+++|++++|+.||...
T Consensus 157 --~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~ 205 (258)
T cd06632 157 --FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQL 205 (258)
T ss_pred --cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccC
Confidence 223345788899999988776 899999999999999999999998643
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-27 Score=247.68 Aligned_cols=198 Identities=24% Similarity=0.376 Sum_probs=171.1
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.+.||+|++|.||+|... +++.+|+|.+.... ......+.+|++++++++||+++++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4889999999999999999864 58889999886543 22346788999999999999999999999988999999999
Q ss_pred ccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC-CcEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY-FEAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~-~~vkl~Dfg~a~~~~~~~~ 816 (885)
+++++|.+++... ...+++..+..++.+++.+++|+| +++++|+||+|+||+++++ +.++++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 9999999999764 344889999999999999999999 9999999999999999854 457999999988765422
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......++..|+|||...+..++.++||||+|+++|+|++|+.||..
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 203 (256)
T cd08220 157 -KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA 203 (256)
T ss_pred -cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCccc
Confidence 22234578899999999988899999999999999999999999865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=257.04 Aligned_cols=199 Identities=19% Similarity=0.263 Sum_probs=169.6
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.|++.+.||+|+||.||+|.+.. ++.||+|.+..... .....+.+|+++++.++||||+++++.+..+++.++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 58889999999999999998764 78899998875432 223567789999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC--
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-- 815 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~-- 815 (885)
|++|++|.+++... ..+++..+..++.|++.+++|+| +.+++||||||+||+++..+.++++|||.+.......
T Consensus 82 ~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 82 YVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred cCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence 99999999999754 34889999999999999999999 8999999999999999999999999999876321100
Q ss_pred ------------CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 ------------SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
........++..|+|||.+.+..++.++|+|||||++||+++|..||.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~ 218 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG 218 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 0011123467789999999988899999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=260.86 Aligned_cols=197 Identities=19% Similarity=0.270 Sum_probs=163.9
Q ss_pred ecceeccc--CCceEEEEEe-CCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 665 FENVIGGG--GFRTAFKGTM-PDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 665 ~~~~lG~G--~~g~vy~a~~-~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
+.++||+| +|+.||++.. .+++.||+|++..... .....+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 57889999 6789999976 4689999999875432 22356778999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC-
Q 047790 740 VNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH- 817 (885)
Q Consensus 740 ~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~- 817 (885)
+++++.+++..+ ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++++||+.+.........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999998753 344889999999999999999999 999999999999999999999999999865433211110
Q ss_pred -----cccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 -----VSTDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 -----~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......++..|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 1112345677999999876 4688999999999999999999999964
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-28 Score=258.15 Aligned_cols=196 Identities=26% Similarity=0.340 Sum_probs=169.8
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
|.....||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++.+..++..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 444567999999999999864 5889999998654444456788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
+++.+++.. ..+++..+..++.|++.+++|+| +.+|+||||||+||++++++.++++|||.+........ ....
T Consensus 104 ~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~~ 177 (292)
T cd06658 104 GALTDIVTH--TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-KRKS 177 (292)
T ss_pred CcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-cCce
Confidence 999998864 34889999999999999999999 89999999999999999999999999999876543221 1223
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..++..|+|||+..+..++.++|+||+|+++||+++|+.||..
T Consensus 178 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~ 220 (292)
T cd06658 178 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFN 220 (292)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 4578899999999888899999999999999999999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-29 Score=289.18 Aligned_cols=202 Identities=29% Similarity=0.364 Sum_probs=174.3
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+--+|+-...||.|.||.||-|...+ |...|+|.+.-.. ....+.+.+|..+++.++|||++++|++-.+++..++.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 45678899999999999999998655 7788899876432 23345688999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
||||++|+|.+..+. +.-.++...+.+-.|++.+++||| +.|||||||||+||+++.+|.+|.+|||.|..+....
T Consensus 1313 MEyC~~GsLa~ll~~-gri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEH-GRIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHhccCcHHHHHHh-cchhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 999999999999984 344788888899999999999999 9999999999999999999999999999998886532
Q ss_pred CCcc---cCCCCCCccCCcccccCCC---CCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SHVS---TDTADTIGYVPSEYGQAGR---ANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~~~---~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.... ....||+.|||||++.+.. ...++||||+|||+.||+||+.||+.
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~ 1443 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAE 1443 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhh
Confidence 1111 2346999999999998854 57889999999999999999999974
|
|
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=252.45 Aligned_cols=196 Identities=27% Similarity=0.386 Sum_probs=160.4
Q ss_pred ceecccCCceEEEEEeCC---CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCC
Q 047790 667 NVIGGGGFRTAFKGTMPD---QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~---~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
+.||+|+||.||+|.+.+ +..+|+|.+..... .....+.+|+.++++++||||+++++++.+....++||||++++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 468999999999997643 45789998865432 23457888999999999999999999998888899999999999
Q ss_pred CHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC-
Q 047790 743 SLDDWLRNRA----ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH- 817 (885)
Q Consensus 743 sL~~~l~~~~----~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~- 817 (885)
+|.+++.... ...++..+..++.|++.|++||| +.+++|+||||+||+++.++.++++|||.+.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999987422 23567778899999999999999 999999999999999999999999999998754332211
Q ss_pred cccCCCCCCccCCcccccCC-------CCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAG-------RANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~-------~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
......++..|+|||++.+. .++.++|+||||+++|||++ |+.||...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 213 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL 213 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence 11223467789999987643 35789999999999999996 99999643
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-28 Score=257.41 Aligned_cols=198 Identities=28% Similarity=0.383 Sum_probs=169.3
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.|++.++||+|++|.||+|.+.+ ++.||+|++...... ..+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 58899999999999999998764 889999988654322 245688899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++++..+.... ..+++..+..++.|++++++||| +.+++|||++|+||++++++.++++|||.+....... ..
T Consensus 82 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-~~ 156 (286)
T cd07846 82 VDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EV 156 (286)
T ss_pred CCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-cc
Confidence 9998888876543 34899999999999999999999 8999999999999999999999999999987654422 22
Q ss_pred ccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||+..+. .++.++||||||+++|||++|+.||..
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~ 203 (286)
T cd07846 157 YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPG 203 (286)
T ss_pred cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCC
Confidence 2234568889999988763 467899999999999999999998854
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-27 Score=249.05 Aligned_cols=195 Identities=28% Similarity=0.466 Sum_probs=166.8
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++.+.||+|+||.||++.. .++.||+|.+.... ....+.+|+.+++.++|||++++++++..+ ..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 46799999999999999999874 67789999986543 246788999999999999999999998754 478999999
Q ss_pred cCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++|.+++.... ..+++..+..++.|++.|++|+| +.|++||||||+||+++.++.++++|||.+......
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---- 153 (254)
T cd05083 81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---- 153 (254)
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceecccc----
Confidence 9999999997543 34788999999999999999999 899999999999999999999999999998764321
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
......+..|+|||++.+..++.++|+||+||++|+|++ |+.||...
T Consensus 154 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 201 (254)
T cd05083 154 VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM 201 (254)
T ss_pred CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC
Confidence 112234567999999998899999999999999999997 99998643
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=251.27 Aligned_cols=201 Identities=27% Similarity=0.399 Sum_probs=174.0
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
+|++.+.||.|++|.||+|... ++..+|+|++.... ......+.+|+++++.++|++++++++.+..+...+++||++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 5889999999999999999865 57889999986533 234567899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 740 VNGSLDDWLRNR--AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 740 ~~~sL~~~l~~~--~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
+++++.++++.. ...+++..+..++.|++.|+++|| +.|++|||++|+||++++++.++++|||.+..+......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 999999999753 245899999999999999999999 999999999999999999999999999998776543222
Q ss_pred ---cccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 ---VSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ---~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++... .++.++|+||+||++|+|++|+.||...
T Consensus 159 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~ 210 (267)
T cd06610 159 TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKY 210 (267)
T ss_pred cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcccc
Confidence 22334578899999998877 7899999999999999999999999743
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=252.93 Aligned_cols=199 Identities=23% Similarity=0.409 Sum_probs=165.0
Q ss_pred EeecceecccCCceEEEEEeCC----CCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCe-----
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE----- 731 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~----- 731 (885)
|++.+.||+|+||.||+|.... +..||+|+++.... .....+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5688999999999999997642 46799999875432 223578899999999999999999998765443
Q ss_pred -eEEEEecccCCCHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeec
Q 047790 732 -KLLVYEYMVNGSLDDWLRNR-----AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDF 805 (885)
Q Consensus 732 -~~lv~e~~~~~sL~~~l~~~-----~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Df 805 (885)
.+++|||+++++|..++... ...+++..+..++.|++.|++|+| +.+++||||||+||++++++.+|++||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 78999999999999988532 234889999999999999999999 899999999999999999999999999
Q ss_pred cCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 806 GLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 806 g~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
|.++.+...... .......+..|+|||+..+..++.++||||+||++|||++ |..||..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~ 218 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPG 218 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 998876432221 1122234568999999988899999999999999999999 8888854
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=258.08 Aligned_cols=202 Identities=26% Similarity=0.311 Sum_probs=169.6
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~ 733 (885)
....|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|++++++++|++|+++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 4567999999999999999999875 5889999998644322 233566899999999999999999998754 5689
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+. +++.+++......+++..+..++.|++.+++||| +.|++||||||+||+++.++.++|+|||.+..+..
T Consensus 85 lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 85 LVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 9999996 5898888765566899999999999999999999 99999999999999999999999999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... .....++..|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 161 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~ 212 (309)
T cd07845 161 PAKP-MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK 212 (309)
T ss_pred ccCC-CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3222 222345778999998865 55789999999999999999999998643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=257.50 Aligned_cols=201 Identities=28% Similarity=0.486 Sum_probs=167.4
Q ss_pred eEEeecceecccCCceEEEEEeC--------CCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCC
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP--------DQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGE 730 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~--------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~ 730 (885)
.+|.++++||+|+||.||+|+.. ....+|+|.+..... ....++.+|+++++++ +||||+++++++..++
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46889999999999999999742 245688998875432 2345688899999999 5999999999999888
Q ss_pred eeEEEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~ 795 (885)
..+++|||+++++|.+++.... ..+++..+..++.|++.|++|+| +.|++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEEc
Confidence 9999999999999999997532 34788889999999999999999 99999999999999999
Q ss_pred CCCcEEEeeccCcccccCCCCCc-ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 796 DYFEAKVSDFGLARLISDCESHV-STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 796 ~~~~vkl~Dfg~a~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.++.+|++|||.++......... .....++..|+|||++.+..++.++||||+||++|++++ |..||..
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~ 239 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPG 239 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCC
Confidence 99999999999997664321111 111223467999999999899999999999999999999 8888854
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-27 Score=248.75 Aligned_cols=203 Identities=23% Similarity=0.297 Sum_probs=171.4
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEe--CCeeEEEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSV--GEEKLLVY 736 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~ 736 (885)
+|++.+.||.|++|.||+|... +++.+|+|.+.... ....+++..|++++++++||||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788999999999999999764 57889999886432 2234568889999999999999999997753 45678999
Q ss_pred ecccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccC--CCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 737 EYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGF--KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 737 e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~--~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
||+++++|.+++... ...+++..++.++.|++.+++++|... +.+++|+||+|+||++++++.++++|||.+...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998753 456899999999999999999999443 578999999999999999999999999998876
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..... ......++..|+|||++.+..++.++|+||+|+++|+|++|+.||...
T Consensus 161 ~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 213 (265)
T cd08217 161 GHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTAR 213 (265)
T ss_pred cCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCc
Confidence 54322 122346788999999999988999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-27 Score=250.29 Aligned_cols=197 Identities=26% Similarity=0.392 Sum_probs=170.9
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.|++.++||+|+||.||+|... +++.+|+|.+..... .....+.+|++++++++||||+++++++..+...++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 3778899999999999999764 588999998764432 23457889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+++++.+++... .+++..+..++.|++.++++|| +.|++|+|++|+||+++.++.++++|||.+....... ...
T Consensus 85 ~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-~~~ 158 (277)
T cd06641 85 GGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKR 158 (277)
T ss_pred CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccch-hhh
Confidence 999999998743 4889999999999999999999 9999999999999999999999999999987654321 122
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....++..|+|||...+..++.++|+||+||++|++++|..||..
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 203 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSE 203 (277)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCc
Confidence 234578889999999888889999999999999999999999864
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-27 Score=250.98 Aligned_cols=196 Identities=26% Similarity=0.336 Sum_probs=169.9
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
|.-.+.||+|++|.||+|... +++.+++|++........+.+.+|+.+++.+.||+|+++++++...++.++++||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 444579999999999999864 6888999988654444456688999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|.+++.. ..+++..+..++.|++.+++++| +.|++||||+|+||+++.++.++++|||.+....... .....
T Consensus 101 ~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-~~~~~ 174 (285)
T cd06648 101 GALTDIVTH--TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV-PRRKS 174 (285)
T ss_pred CCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC-ccccc
Confidence 999999876 44889999999999999999999 9999999999999999999999999999876554321 12223
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..++..|+|||...+..++.++|+||+||++|+|++|+.||..
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~ 217 (285)
T cd06648 175 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFN 217 (285)
T ss_pred ccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcC
Confidence 4578899999999888899999999999999999999999854
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-27 Score=253.86 Aligned_cols=201 Identities=32% Similarity=0.547 Sum_probs=169.3
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
.+|++.+.||+|+||.||+|... ++..||+|.+..... .....+.+|++++++++||+|+++++++.++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence 46899999999999999999853 467899999875432 23456889999999999999999999999888999
Q ss_pred EEEecccCCCHHHHHhhcC---------------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcE
Q 047790 734 LVYEYMVNGSLDDWLRNRA---------------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNI 792 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~---------------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Ni 792 (885)
++|||+++++|.+++.... ..+++..++.++.|++.|++|+| +.+++||||||+||
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~ni 161 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRNC 161 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhhe
Confidence 9999999999999987422 23678888999999999999999 89999999999999
Q ss_pred EEcCCCcEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 793 LLNDYFEAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 793 l~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+++.++.++++|||.+..+..... ........+..|+|||...+..++.++|||||||++|||++ |..||.+
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred EecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999876543211 11122234567999999998899999999999999999998 8888854
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-27 Score=250.47 Aligned_cols=191 Identities=23% Similarity=0.308 Sum_probs=158.0
Q ss_pred eecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhc---ccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 668 VIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLD---MVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~---~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.||+|+||.||+|... +++.+|+|.+.+... .......+|..+++ ...||+|+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999875 488999998865432 11223344444433 3468999999999998899999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
+++|.+++.... .+++..+..++.|++.|++|+| +.+|+||||||+||+++.++.++++|||.+....... ..
T Consensus 81 ~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---~~ 153 (279)
T cd05633 81 GGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PH 153 (279)
T ss_pred CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---cc
Confidence 999999887544 4899999999999999999999 9999999999999999999999999999987654321 22
Q ss_pred CCCCCCccCCccccc-CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 821 DTADTIGYVPSEYGQ-AGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~-~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...++..|+|||... +..++.++|+||+||++|+|++|+.||...
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 199 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCC
Confidence 346889999999886 456889999999999999999999999643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-27 Score=252.98 Aligned_cols=202 Identities=26% Similarity=0.414 Sum_probs=171.2
Q ss_pred eeEEeecceecccCCceEEEEEeCC-----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEe-CCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSV-GEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~ 732 (885)
..+|++.+.||+|+||.||+|.+.+ +..|++|++..... .....+.+|+.++++++||||+++++++.. +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 3568999999999999999998765 67889998865432 234668899999999999999999998765 4678
Q ss_pred EEEEecccCCCHHHHHhhcC-------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeec
Q 047790 733 LLVYEYMVNGSLDDWLRNRA-------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDF 805 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~-------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Df 805 (885)
++++||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+|++||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCC
Confidence 89999999999999987532 34889999999999999999999 999999999999999999999999999
Q ss_pred cCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 806 GLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 806 g~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
|+++.+...... ......++..|+|||+..+..++.++||||+|+++||+++ |+.||..
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 222 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVE 222 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCc
Confidence 999876432221 1223345678999999998899999999999999999999 9999864
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=253.91 Aligned_cols=202 Identities=27% Similarity=0.439 Sum_probs=172.9
Q ss_pred eEEeecceecccCCceEEEEEeC-----CCCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEe--CCee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-----DQKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSV--GEEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-----~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~ 732 (885)
..|++.+.||+|+||.||+|.+. .++.+|+|.+...... ....+.+|+++++.++||||+++++++.. +...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45788899999999999999753 3688999998765443 35679999999999999999999999876 5578
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
+++|||+++++|.+++......+++..+..++.|++.|++||| +.|++|+||||+||+++.++.++++|||.+....
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 9999999999999999876656899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCc--ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHV--STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...... ......+..|+|||...+..++.++|+||+|+++|||++|+.|+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~ 215 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSP 215 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccc
Confidence 322211 11223456799999998889999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=255.89 Aligned_cols=201 Identities=27% Similarity=0.463 Sum_probs=170.1
Q ss_pred eEEeecceecccCCceEEEEEeCC-----------------CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccce
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-----------------QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQL 722 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-----------------~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~ 722 (885)
.+|++.++||+|+||.||+|...+ +..||+|.+..... .....+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 468999999999999999987543 24588998875432 234678899999999999999999
Q ss_pred eeeeEeCCeeEEEEecccCCCHHHHHhhcC----------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcE
Q 047790 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRA----------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNI 792 (885)
Q Consensus 723 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Ni 792 (885)
++++..++..+++|||+++++|.+++.... ..+++..++.++.|++.|++||| +.+++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhce
Confidence 999998899999999999999999987543 25899999999999999999999 99999999999999
Q ss_pred EEcCCCcEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh--CCCCCCC
Q 047790 793 LLNDYFEAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT--GKQPTGP 864 (885)
Q Consensus 793 l~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt--g~~P~~~ 864 (885)
++++++.++++|||.+........ .......++..|+|||+..+..++.++|||||||++||+++ |..||..
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 999999999999999876543221 11223345678999999988889999999999999999998 6778754
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=262.30 Aligned_cols=201 Identities=27% Similarity=0.430 Sum_probs=167.9
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEecccccc-cHHHHHHHHHHhcccC-CCCccceeeeeEeCCee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQ-CDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~ 732 (885)
..|.++++||+|+||.||+|++. .++.||+|++...... ..+.+.+|++++.++. ||||+++++++...+..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 35778899999999999999853 3467999999764322 2346889999999997 99999999999988899
Q ss_pred EEEEecccCCCHHHHHhhcC------------------------------------------------------------
Q 047790 733 LLVYEYMVNGSLDDWLRNRA------------------------------------------------------------ 752 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~------------------------------------------------------------ 752 (885)
++||||+++|+|.++++...
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 99999999999999986421
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc
Q 047790 753 -------------------------------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795 (885)
Q Consensus 753 -------------------------------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~ 795 (885)
..+++..+..++.|++.|++||| +.+++||||||+||+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl~ 273 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLIC 273 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEEe
Confidence 12566778889999999999999 89999999999999999
Q ss_pred CCCcEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 796 DYFEAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 796 ~~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+.+.++++|||.++.+..... .......++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~ 344 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPE 344 (401)
T ss_pred CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999876533211 11122346778999999998889999999999999999998 8889864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-27 Score=251.85 Aligned_cols=199 Identities=24% Similarity=0.298 Sum_probs=165.5
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.+|++.+.||+|++|.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++..+...++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46999999999999999999875 588999999865432 223568889999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-CCcEEEeeccCcccccCCC
Q 047790 738 YMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-YFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-~~~vkl~Dfg~a~~~~~~~ 815 (885)
|++ +++.+.+.... ...++..+..++.|++.|++||| +.+++|+||+|+||+++. ++.+|++|||.+.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 995 57877775432 33678888899999999999999 899999999999999985 5579999999997654321
Q ss_pred CCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.......++..|+|||++.+ ..++.++||||+||++|+|+||+.||..
T Consensus 158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~ 206 (294)
T PLN00009 158 -RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPG 206 (294)
T ss_pred -cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11223356789999998766 4578999999999999999999999853
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-27 Score=247.60 Aligned_cols=192 Identities=26% Similarity=0.307 Sum_probs=168.2
Q ss_pred ecccCCceEEEEEeCC-CCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCH
Q 047790 669 IGGGGFRTAFKGTMPD-QKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSL 744 (885)
Q Consensus 669 lG~G~~g~vy~a~~~~-~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL 744 (885)
||+|++|.||+|+... ++.+|+|.+..... .....+.+|+++++.++||||+++++++.++...+++|||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 6899999999998764 88999999875432 2346788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCC
Q 047790 745 DDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD 824 (885)
Q Consensus 745 ~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~ 824 (885)
.+++... ..++...+..++.|++++++|+| +.+++|+||+|+||+++.++.++++|||.+....... ......+
T Consensus 81 ~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~ 154 (262)
T cd05572 81 WTILRDR-GLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCG 154 (262)
T ss_pred HHHHhhc-CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccC
Confidence 9999854 34889999999999999999999 9999999999999999999999999999988765432 2233467
Q ss_pred CCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 825 TIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 825 ~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
+..|+|||...+..++.++|+||+|+++|++++|..||....
T Consensus 155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 196 (262)
T cd05572 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDD 196 (262)
T ss_pred CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCC
Confidence 889999999988889999999999999999999999997543
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-27 Score=250.13 Aligned_cols=199 Identities=26% Similarity=0.373 Sum_probs=168.8
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCC------ee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGE------EK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~------~~ 732 (885)
++|++.+.||+|++|.||+|... +++.+++|++..... ...++.+|+++++++ .||||+++++++.... ..
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 67999999999999999999875 477899998865443 346788999999998 6999999999986543 47
Q ss_pred EEEEecccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 733 LLVYEYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
++||||+++++|.+++... ...+++..++.++.|+++|+.||| +.+++|+||+|+||+++.++.++++|||.+.
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~ 161 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSA 161 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCccce
Confidence 9999999999999988742 356899999999999999999999 9999999999999999999999999999987
Q ss_pred cccCCCCCcccCCCCCCccCCcccccC-----CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQA-----GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
...... .......++..|+|||++.. ..++.++||||+||++|++++|+.||..
T Consensus 162 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 220 (275)
T cd06608 162 QLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCD 220 (275)
T ss_pred ecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccc
Confidence 654322 22233457889999998754 3467889999999999999999999964
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-28 Score=237.70 Aligned_cols=198 Identities=23% Similarity=0.280 Sum_probs=162.8
Q ss_pred eeeEEeec-ceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcc-cCCCCccceeeeeEe----CCe
Q 047790 659 VIAIIVFE-NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDM-VKHQNLVQLLGYCSV----GEE 731 (885)
Q Consensus 659 ~~~~~~~~-~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~-l~~~~i~~~~~~~~~----~~~ 731 (885)
+..+|.+. .+||-|-.|.|..+.++ .|+.+|+|++... ....+|++.--. -.||||+.++++++. .+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 33456654 58999999999999765 5888999987542 345567766433 359999999998854 234
Q ss_pred eEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc---CCCcEEEeeccC
Q 047790 732 KLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN---DYFEAKVSDFGL 807 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~---~~~~vkl~Dfg~ 807 (885)
..+|||.++||.|.+.++.+ .+.+++..+..|..||+.|++||| +..|.|||+||+|++.+ .+..+|++|||+
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEeccccc
Confidence 56999999999999999864 445999999999999999999999 99999999999999996 445689999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
|+...... .-...+-|++|+|||++...+|+..+|+||+||+||-|+.|++||....
T Consensus 211 AK~t~~~~--~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~h 267 (400)
T KOG0604|consen 211 AKETQEPG--DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267 (400)
T ss_pred ccccCCCc--cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccC
Confidence 98755322 2234578999999999999999999999999999999999999997543
|
|
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-27 Score=249.83 Aligned_cols=199 Identities=24% Similarity=0.380 Sum_probs=169.0
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---c-------cHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---Q-------CDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~-------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
.|.+.+.||+|++|.||+|... +++.+|+|.+..... . ..+.+..|++++++++||+++++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4888999999999999999765 588999998753211 0 1235788999999999999999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..++||||+++++|.++++.. ..+++..+..++.|++.|+.++| +.+++||||+|+||+++.++.++++|||.+..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 999999999999999999865 45889999999999999999999 89999999999999999999999999999876
Q ss_pred ccCCCC-CcccCCCCCCccCCcccccCCC--CCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 811 ISDCES-HVSTDTADTIGYVPSEYGQAGR--ANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 811 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
...... .......++..|+|||...... ++.++|+||+|+++|++++|..||..
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 214 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD 214 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence 543211 1122345788999999887654 78999999999999999999999853
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=251.34 Aligned_cols=198 Identities=23% Similarity=0.384 Sum_probs=170.9
Q ss_pred EEeecceecccCCceEEEEEe-CCCCeEEEEEecccc-cccHHHHHHHHHHhcccC---CCCccceeeeeEeCCeeEEEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT-GQCDREFAAEMETLDMVK---HQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.|++.+.||+|+||.||+|.+ .+++.||+|.+.... .....++.+|++++++++ ||+++++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 478889999999999999986 468899999986543 233467888999999987 999999999999889999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||+++++|.++++.. .+++..+..++.|++.+++|+| +.|++|+||+|+||+++..+.++++|||.+........
T Consensus 82 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 82 EYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred ecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 999999999998753 5889999999999999999999 99999999999999999999999999999887654332
Q ss_pred CcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. .....++..|+|||...+ ..++.++|+||+||++|+|++|+.||...
T Consensus 157 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~ 205 (277)
T cd06917 157 K-RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDV 205 (277)
T ss_pred c-cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCC
Confidence 2 233467889999998765 45688999999999999999999999643
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=251.28 Aligned_cols=196 Identities=26% Similarity=0.371 Sum_probs=157.8
Q ss_pred ceecccCCceEEEEEeCC---CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCC
Q 047790 667 NVIGGGGFRTAFKGTMPD---QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~---~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
+.||+|+||.||+|...+ ...+|+|.+..... .....+.+|+++++.++||||+++++.+......++||||++++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 368999999999997543 34577887654332 22356788999999999999999999999889999999999999
Q ss_pred CHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC-
Q 047790 743 SLDDWLRNRA----ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH- 817 (885)
Q Consensus 743 sL~~~l~~~~----~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~- 817 (885)
+|.+++.... ...++..+..++.|++.|++|+| +++|+||||||+||+++.++.+|++|||.+.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 9999987532 22467788899999999999999 999999999999999999999999999998654332111
Q ss_pred cccCCCCCCccCCcccccC-------CCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQA-------GRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
......++..|+|||+... ..++.++||||+||++|||++ |..||...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL 213 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 1122345677999998643 456789999999999999999 78888643
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-28 Score=262.63 Aligned_cols=202 Identities=26% Similarity=0.397 Sum_probs=174.0
Q ss_pred eEEeecceecccCCceEEEEEeCC--CC--eEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD--QK--TVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~--~~--~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+.....++||+|.||+|++|.|.. |+ .||||.+...... ...+|.+|+.+|.+|+|||++++|++..+ ....||
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV 188 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV 188 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence 345677899999999999998853 44 4889998765433 56789999999999999999999999987 678899
Q ss_pred EecccCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 736 YEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||.++.|+|.+.+++ ....+-......++.||++|+.||. .+++||||+.++|+++.....|||+|||+.+..+..
T Consensus 189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 999999999999987 4455888899999999999999999 999999999999999998889999999999887654
Q ss_pred CCCccc--CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCC
Q 047790 815 ESHVST--DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPEF 866 (885)
Q Consensus 815 ~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~~ 866 (885)
+..+.. ...-.+.|+|||.+...+++-++|||++||++|||+| |..||.+..
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~ 320 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR 320 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC
Confidence 443322 2334567999999999999999999999999999998 788998653
|
|
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-27 Score=251.70 Aligned_cols=201 Identities=26% Similarity=0.355 Sum_probs=167.9
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeE-----eCCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCS-----VGEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-----~~~~ 731 (885)
...+|++.+.||+|+||.||+|... .++.+|+|++.... .....+.+|+.+++.+ +||||+++++++. .+..
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 94 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ 94 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence 4567999999999999999999865 47889999876432 2246688899999999 6999999999874 3456
Q ss_pred eEEEEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 732 KLLVYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
.++||||+++++|.+++.. ....+++..+..++.|++.|+.||| +.+++|||+||+||+++.++.++++|||.+
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 95 LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 8999999999999998753 2345888999999999999999999 899999999999999999999999999998
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccC-----CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQA-----GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..+.... .......++..|+|||++.. ..++.++||||+||++|||++|+.||..
T Consensus 172 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~ 231 (286)
T cd06638 172 AQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLAD 231 (286)
T ss_pred eecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCC
Confidence 7764321 22233468899999998753 4578899999999999999999999864
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-27 Score=251.87 Aligned_cols=199 Identities=27% Similarity=0.375 Sum_probs=175.2
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|++.+.+|+|++|.||+|.+. +++.+++|++..... ....+.+|++++++++|+|++++++++......++++||+
T Consensus 19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 97 (286)
T cd06614 19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYM 97 (286)
T ss_pred ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEecc
Confidence 45888999999999999999876 588899999876544 4567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++......+++..+..++.|++.+++++| +.|++|+|++|+||+++.++.++++|||.+........ ..
T Consensus 98 ~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~ 173 (286)
T cd06614 98 DGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS-KR 173 (286)
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-hh
Confidence 999999999876546999999999999999999999 89999999999999999999999999998876543221 11
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....++..|+|||+..+..++.++|+|||||++|+|++|+.||..
T Consensus 174 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~ 218 (286)
T cd06614 174 NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLR 218 (286)
T ss_pred ccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 223467889999999988899999999999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=250.88 Aligned_cols=189 Identities=26% Similarity=0.424 Sum_probs=159.4
Q ss_pred ceecccCCceEEEEEeCC--------CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 667 NVIGGGGFRTAFKGTMPD--------QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~--------~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+.||+|+||.||+|.... ...+|+|.+........+.+.+|+.+++.+.||||+++++++..+...++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999997643 234777877655444456788899999999999999999999988899999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc--------EEEeeccCccc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE--------AKVSDFGLARL 810 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~--------vkl~Dfg~a~~ 810 (885)
+++++|.+++..+...+++..+..++.|++.|++||| +.||+||||||+||+++.++. ++++|||.+..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 9999999999876666899999999999999999999 999999999999999987654 69999998865
Q ss_pred ccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCC-CCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGK-QPTG 863 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~-~P~~ 863 (885)
.... ....++..|+|||++.+ ..++.++||||+||++||+++|. .||.
T Consensus 158 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~ 207 (258)
T cd05078 158 VLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS 207 (258)
T ss_pred cCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChh
Confidence 4431 22356788999999887 45789999999999999999995 5544
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-27 Score=251.63 Aligned_cols=190 Identities=24% Similarity=0.365 Sum_probs=158.4
Q ss_pred eecccCCceEEEEEeCC-------------------------CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccce
Q 047790 668 VIGGGGFRTAFKGTMPD-------------------------QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~~~-------------------------~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 722 (885)
.||+|+||.||+|.... ...|++|.+..........+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 68999999999986321 23478888865544445678889999999999999999
Q ss_pred eeeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC----
Q 047790 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF---- 798 (885)
Q Consensus 723 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~---- 798 (885)
++++..+...++||||+++++|..++......+++..+..++.|++.|++|+| +++|+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCcccC
Confidence 99999999999999999999999999765566899999999999999999999 99999999999999997543
Q ss_pred ---cEEEeeccCcccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHH-hCCCCCCCC
Q 047790 799 ---EAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELV-TGKQPTGPE 865 (885)
Q Consensus 799 ---~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~ell-tg~~P~~~~ 865 (885)
.++++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||...
T Consensus 159 ~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 225 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKER 225 (274)
T ss_pred ccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 3799999987543221 12346778999998865 56899999999999999984 799998653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=255.52 Aligned_cols=200 Identities=25% Similarity=0.275 Sum_probs=170.2
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~lv 735 (885)
..|++.+.||+|++|.||+|.+. +++.+|+|.++..... ....+.+|++++++++||||+++++++..+ ...|+|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46899999999999999999876 4888999998644322 234567899999999999999999998777 789999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||++ ++|.+++......+++..+..++.|++.|++||| +.|++||||+|+||+++.++.++++|||.+..+....
T Consensus 85 ~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred ehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 99996 5999988765556899999999999999999999 8999999999999999999999999999988765432
Q ss_pred CCcccCCCCCCccCCcccccCCC-CCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGR-ANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ......++..|+|||.+.+.. ++.++|+||+|+++|+|++|+.||...
T Consensus 161 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~ 210 (293)
T cd07843 161 K-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGK 210 (293)
T ss_pred c-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1 222345678899999887654 688999999999999999999998743
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=243.84 Aligned_cols=198 Identities=27% Similarity=0.428 Sum_probs=174.6
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.+.||+|++|.||+|... +++.|++|.+..... .....+.+|++++++++||+++++++++..+...+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788999999999999999865 578899999876543 3456789999999999999999999999989999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++... ..+++..+..++.|++.++.++| +.|++||||+|+||+++.++.++++|||.+.........
T Consensus 81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 155 (254)
T cd06627 81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD- 155 (254)
T ss_pred CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-
Confidence 9999999998855 45899999999999999999999 999999999999999999999999999999876543221
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||...+..++.++|+|++|+++|++++|+.||..
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~ 201 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYD 201 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 2334678899999999888889999999999999999999999864
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-28 Score=261.01 Aligned_cols=197 Identities=26% Similarity=0.430 Sum_probs=166.3
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEE---EEEecc-cccccHHHHHHHHHHhcccCCCCccceeeeeEeCC--eeEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVA---VKKLSQ-ATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE--EKLL 734 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~va---lK~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--~~~l 734 (885)
..++..+||+|+|-.||+|.+.. |..|| +|.-.. ..+...+++..|++.++.|+||||+++|+++.+.. .+.+
T Consensus 41 y~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~ 120 (632)
T KOG0584|consen 41 YLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINF 120 (632)
T ss_pred eeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeee
Confidence 35678999999999999998654 77777 332111 12334578999999999999999999999887654 4779
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-CCCcEEEeeccCcccccC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARLISD 813 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-~~~~vkl~Dfg~a~~~~~ 813 (885)
|+|.+..|+|..+..+... .+...++.|+.||+++|.|||.. ...|+|||||=+|||++ ..|.|||+|.|+|+....
T Consensus 121 iTEL~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred eeecccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 9999999999999986554 89999999999999999999954 56799999999999997 678999999999998764
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
+. .....||+.|||||+.. ..|....||||||++|.||+|+.+||..
T Consensus 199 s~---aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE 245 (632)
T KOG0584|consen 199 SH---AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE 245 (632)
T ss_pred cc---cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh
Confidence 22 22368999999999876 8899999999999999999999999864
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-27 Score=252.12 Aligned_cols=200 Identities=26% Similarity=0.379 Sum_probs=169.6
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.|++.++||+|++|.||+|+.. +++.||+|++..... .....+.+|++++++++||||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 3889999999999999999875 588899999875432 23456778999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 740 VNGSLDDWLRNRA--ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 740 ~~~sL~~~l~~~~--~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
++ ++.+++.... ..+++..+..++.|++.|++|+| +.|++||||+|+||++++++.++++|||.+........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 75 8888876533 45899999999999999999999 89999999999999999999999999999876543211
Q ss_pred cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
......++..|+|||++.+ ..++.++|+||+||++|++++|+.||....
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~ 205 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTN 205 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1223346788999998766 456889999999999999999999997543
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-27 Score=259.01 Aligned_cols=201 Identities=28% Similarity=0.441 Sum_probs=165.4
Q ss_pred eEEeecceecccCCceEEEEEe------CCCCeEEEEEecccccc-cHHHHHHHHHHhccc-CCCCccceeeeeEe-CCe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATGQ-CDREFAAEMETLDMV-KHQNLVQLLGYCSV-GEE 731 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~-~~~ 731 (885)
.+|++.++||+|+||.||+|.+ .+++.||+|.++..... ....+.+|++++.++ +||||+++++++.. +..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 4799999999999999999973 34778999998754322 235688899999999 68999999998754 456
Q ss_pred eEEEEecccCCCHHHHHhhcC-----------------------------------------------------------
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA----------------------------------------------------------- 752 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~----------------------------------------------------------- 752 (885)
.+++|||+++|+|.+++....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 789999999999999886421
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC-cccCCCC
Q 047790 753 -------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH-VSTDTAD 824 (885)
Q Consensus 753 -------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~ 824 (885)
..+++..+..++.|+++|++|+| +.||+||||||+||+++.++.++++|||.+......... ......+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 12577788899999999999999 999999999999999999999999999998765332111 1112234
Q ss_pred CCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 825 TIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 825 ~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+..|+|||+..+..++.++|+||+|+++|++++ |..||..
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 284 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 284 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 567999999988899999999999999999997 9999864
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-27 Score=251.03 Aligned_cols=197 Identities=26% Similarity=0.335 Sum_probs=169.9
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
|....+||+|+||.||+|... +++.||+|++..........+.+|+.+++.++||+++++++++..++..++||||+++
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence 333468999999999999874 6889999998654444456788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
+++.+++... .+++..+..++.|++.+++|+| +.|++|||++|+||+++.++.++++|||.+....... .....
T Consensus 102 ~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~ 175 (292)
T cd06657 102 GALTDIVTHT--RMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKS 175 (292)
T ss_pred CcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccc
Confidence 9999987643 4788999999999999999999 8999999999999999999999999999887654322 12233
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..++..|+|||+..+..++.++|+||+|+++|+|++|+.||...
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~ 219 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 219 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 45788999999998888899999999999999999999998643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-27 Score=247.68 Aligned_cols=193 Identities=25% Similarity=0.307 Sum_probs=167.3
Q ss_pred ecccCCceEEEEEeCC-CCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCH
Q 047790 669 IGGGGFRTAFKGTMPD-QKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSL 744 (885)
Q Consensus 669 lG~G~~g~vy~a~~~~-~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL 744 (885)
||+|+||.||+|++.+ ++.+++|.+..... .....+.+|++++++++||||+++++.+..++..|++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999875 89999999875433 2345788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC-------C
Q 047790 745 DDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES-------H 817 (885)
Q Consensus 745 ~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~-------~ 817 (885)
.+++.... .+++..+..++.|++++++|+| +.+++||||+|+||++++++.++++|||++........ .
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence 99998644 5899999999999999999999 99999999999999999999999999998876433211 1
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||......++.++||||+|+++|++++|..||...
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 204 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGE 204 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 223345678899999998888999999999999999999999998643
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-26 Score=250.11 Aligned_cols=201 Identities=28% Similarity=0.374 Sum_probs=168.0
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeC-----Cee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVG-----EEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~-----~~~ 732 (885)
...|++.+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.+++++ +|||++++++++... ...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~ 99 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL 99 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence 467999999999999999999874 58889999886533 2245678899999998 799999999988643 357
Q ss_pred EEEEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 733 LLVYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
++||||+++++|.++++. ....+++..++.++.|++.|++||| +.+++||||||+||+++.++.++++|||.+.
T Consensus 100 ~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 100 WLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred EEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 999999999999998763 3445899999999999999999999 8999999999999999999999999999987
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCC-----CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAG-----RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....... ......++..|+|||++... .++.++|+||+||++|||++|+.||...
T Consensus 177 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~ 236 (291)
T cd06639 177 QLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM 236 (291)
T ss_pred hcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence 6543221 12234578889999987643 3688999999999999999999998643
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=251.85 Aligned_cols=196 Identities=28% Similarity=0.372 Sum_probs=168.0
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.+.||+|+||.||+|... +++.||+|++..... ....++.+|+++++.++||||+++++++..++..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 356899999999999999999865 588999998864332 2235688999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+. +++.+.+......+++..+..++.|++.++.||| +.+++||||+|+||++++++.++++|||.+......
T Consensus 94 ~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 94 MEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred HHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 99996 5787777655556899999999999999999999 899999999999999999999999999988764321
Q ss_pred CCcccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....++..|+|||++. ...++.++||||||+++|||++|+.||..
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~ 216 (307)
T cd06607 169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216 (307)
T ss_pred ----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCC
Confidence 2345778899999874 45678899999999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-27 Score=254.73 Aligned_cols=203 Identities=23% Similarity=0.302 Sum_probs=168.9
Q ss_pred EEeecceecccCCceEEEEEeCC---CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD---QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKL 733 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~---~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~ 733 (885)
+|++.+.||+|++|.||+|.... ++.||+|.+.... ......+.+|++++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 37889999999999999998754 7899999987633 23346778899999999999999999999887 7899
Q ss_pred EEEecccCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC----CCcEEEeec
Q 047790 734 LVYEYMVNGSLDDWLRNR----AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND----YFEAKVSDF 805 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~----~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~----~~~vkl~Df 805 (885)
+||||+++ ++.+.+... ...+++..+..++.|++.|++||| +.+++||||||+||+++. .+.+|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999964 777766431 235889999999999999999999 999999999999999998 899999999
Q ss_pred cCcccccCCCC--CcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 047790 806 GLARLISDCES--HVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEFED 868 (885)
Q Consensus 806 g~a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~~~ 868 (885)
|.+........ .......++..|+|||++.+. .++.++||||+||++|+|++|+.||.....+
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~ 222 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAK 222 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccc
Confidence 99887644222 122234578889999987764 5789999999999999999999999865443
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-27 Score=252.58 Aligned_cols=199 Identities=28% Similarity=0.330 Sum_probs=171.2
Q ss_pred EeecceecccCCceEEEEEeCC-CCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeEEEEe
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKLLVYE 737 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~e 737 (885)
|++.+.||+|++|.||+|...+ ++.+|+|++.... ......+.+|++++++++|||++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 6788999999999999998764 8889999998653 23346788999999999999999999999887 78999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|++ +++.+++......+++..+..++.|+++|+++|| +.|++|+||+|+||++++++.++++|||.+.........
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~ 156 (287)
T cd07840 81 YMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA 156 (287)
T ss_pred ccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc
Confidence 996 4899988765556899999999999999999999 899999999999999999999999999998876554322
Q ss_pred cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~ 205 (287)
T cd07840 157 DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGS 205 (287)
T ss_pred cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 2334456788999997765 45789999999999999999999998643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=245.78 Aligned_cols=194 Identities=31% Similarity=0.490 Sum_probs=158.8
Q ss_pred ceecccCCceEEEEEeCC----CCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeE-eCCeeEEEEeccc
Q 047790 667 NVIGGGGFRTAFKGTMPD----QKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCS-VGEEKLLVYEYMV 740 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~ 740 (885)
+.||+|+||.||+|.+.+ +..+|+|.+.... ......+.+|+.+++.++||||+++++++. .+...+++|||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999997542 4568999875432 233467888999999999999999999765 4556789999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC---C
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES---H 817 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~---~ 817 (885)
+++|.+++.......++..+..++.|+++|++|+| +.+++||||||+||++++++.+|++|||.++.+..... .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 99999999865555778888999999999999999 89999999999999999999999999999876543211 1
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhC-CCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTG-KQPTG 863 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg-~~P~~ 863 (885)
......++..|+|||+..+..++.++|||||||++|||++| .+||.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~ 204 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 204 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCC
Confidence 11122356789999999888999999999999999999995 45554
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-27 Score=247.76 Aligned_cols=197 Identities=21% Similarity=0.343 Sum_probs=168.1
Q ss_pred EeecceecccCCceEEEEEeCC--CCeEEEEEecccc----------cccHHHHHHHHHHhcc-cCCCCccceeeeeEeC
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD--QKTVAVKKLSQAT----------GQCDREFAAEMETLDM-VKHQNLVQLLGYCSVG 729 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~--~~~valK~~~~~~----------~~~~~~~~~E~~~l~~-l~~~~i~~~~~~~~~~ 729 (885)
|++.+.||+|+||.||+|.... ++.+|+|.+.... .....++.+|++++.+ ++||||+++++++..+
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 7889999999999999998765 7789999875322 1122456778888764 7899999999999999
Q ss_pred CeeEEEEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCCCCcEEEcCCCcEEEeec
Q 047790 730 EEKLLVYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIKTSNILLNDYFEAKVSDF 805 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlkp~Nil~~~~~~vkl~Df 805 (885)
+..+++|||+++++|.+++.. ....+++..++.++.|++.++.++| + .+++|+||+|+||+++.++.++++||
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH---KEKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhc---cCCceeecCCCHHHEEECCCCcEEEecc
Confidence 999999999999999988753 3455899999999999999999999 5 68999999999999999999999999
Q ss_pred cCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 806 GLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 806 g~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
|.+....... ......++..|+|||+..+..++.++|+||+|+++|++++|+.||..
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~ 215 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYS 215 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccc
Confidence 9988765432 22344678899999999988899999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=250.06 Aligned_cols=198 Identities=24% Similarity=0.287 Sum_probs=164.5
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccC-CCCccceeeeeEeCCe-----e
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVK-HQNLVQLLGYCSVGEE-----K 732 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~-----~ 732 (885)
.|++.+.||+|+||.||+|.+. +++.||+|++...... ....+.+|++++++++ ||||+++++++...+. .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 5889999999999999999865 5889999987654322 2356888999999996 6999999998876555 7
Q ss_pred EEEEecccCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-CCcEEEeeccC
Q 047790 733 LLVYEYMVNGSLDDWLRNR----AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-YFEAKVSDFGL 807 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~----~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-~~~vkl~Dfg~ 807 (885)
|+||||+++ ++.+++... ...+++..++.++.|++.|++||| +.+|+||||+|+||+++. ++.++++|||.
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeeccc
Confidence 999999975 888887642 234799999999999999999999 899999999999999998 88999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
+..+...... .....+++.|+|||++.+ ..++.++|+||+|+++|+|++|..||..
T Consensus 158 ~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 214 (295)
T cd07837 158 GRAFSIPVKS-YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPG 214 (295)
T ss_pred ceecCCCccc-cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCC
Confidence 8765432211 122356788999998765 4578999999999999999999999864
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-27 Score=253.43 Aligned_cols=201 Identities=28% Similarity=0.454 Sum_probs=167.3
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CC----eEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QK----TVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~----~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
..+|+..+.||+|+||.||+|.+.. ++ .+|+|.+..... .....+.+|+.+++.++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-CCce
Confidence 3567889999999999999998643 43 468888765432 223468899999999999999999998865 4467
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+++||+++|++.+++..+...+++..+..++.|++.|++||| +.+|+||||||+||++++++.+|++|||.++.+..
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccccC
Confidence 899999999999999876656899999999999999999999 99999999999999999999999999999987643
Q ss_pred CCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 814 CESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 814 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.... ......++..|+|||+..+..++.++|||||||++||+++ |..||..
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~ 214 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 214 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 2221 1222335678999999999999999999999999999997 8899864
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=244.90 Aligned_cols=199 Identities=25% Similarity=0.345 Sum_probs=171.0
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.+.||+|+||.||+|... +++.+|+|.+.... ....+.+.+|+++++.++||||+++++.+..+...++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4788999999999999999875 47889999986532 22345788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-cEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-EAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-~vkl~Dfg~a~~~~~~~~ 816 (885)
+++++|.+++.... ..+++..+..++.|++++++||| +.+++|+|++|+||++++++ .++++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 99999999987533 34789999999999999999999 89999999999999998775 46999999987765422
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.......++..|+|||+..+..++.++|+||+|+++||+++|..||..
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 204 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEG 204 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 122234578899999999888899999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=246.47 Aligned_cols=191 Identities=23% Similarity=0.309 Sum_probs=158.4
Q ss_pred eecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHH---hcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 668 VIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMET---LDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~---l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.||+|+||.||+|... .++.||+|.+.+.... ....+..|..+ ++...||+|+++++++...+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999865 4889999998754322 12223344433 444579999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
|++|.+++... ..+++..+..++.|++.+++||| +.+++||||||+||+++.++.++++|||.+...... ...
T Consensus 81 g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~---~~~ 153 (278)
T cd05606 81 GGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPH 153 (278)
T ss_pred CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc---CCc
Confidence 99999988754 45899999999999999999999 899999999999999999999999999998765432 122
Q ss_pred CCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 821 DTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...++..|+|||+..+. .++.++|+||+||++|+|++|+.||...
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~ 199 (278)
T cd05606 154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (278)
T ss_pred CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence 34688999999998754 6889999999999999999999999754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-27 Score=258.22 Aligned_cols=198 Identities=28% Similarity=0.304 Sum_probs=168.8
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC-----
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG----- 729 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~----- 729 (885)
.+..+|++.+.||+|+||.||+|... +++.||+|++.+.. ......+.+|++++++++||||+++++++..+
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 35678999999999999999999865 58899999986532 22345677899999999999999999987543
Q ss_pred -CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 730 -EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 730 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
...|+||||+. +++.+.+... ++...+..++.|++.|++||| +.||+||||||+||+++.++.++++|||.+
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35699999995 5888877642 788899999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....... ......++..|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 166 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 219 (353)
T cd07850 166 RTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPG 219 (353)
T ss_pred eeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence 8764321 12334578899999999999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=244.68 Aligned_cols=190 Identities=23% Similarity=0.283 Sum_probs=158.7
Q ss_pred EEeeccee--cccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVI--GGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~l--G~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.|++.+.+ |+|+||.||++..+ +++.+|+|.+........ |+.....+ +||||+++++.+..++..++|||
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e 89 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMD 89 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEE
Confidence 45565655 99999999999864 578899998865432211 22222212 69999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-cEEEeeccCcccccCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-EAKVSDFGLARLISDCES 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-~vkl~Dfg~a~~~~~~~~ 816 (885)
|+++++|.+++.... .+++..+..++.|+++|++|+| +.|++||||+|+||+++.++ .++++|||.+......
T Consensus 90 ~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-- 163 (267)
T PHA03390 90 YIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-- 163 (267)
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC--
Confidence 999999999997654 6899999999999999999999 89999999999999999888 9999999998765432
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....++..|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 164 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 209 (267)
T PHA03390 164 ---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKED 209 (267)
T ss_pred ---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 1235788999999999999999999999999999999999999744
|
|
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-27 Score=257.10 Aligned_cols=201 Identities=29% Similarity=0.475 Sum_probs=167.2
Q ss_pred eEEeecceecccCCceEEEEEeCC--------CCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCC
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD--------QKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGE 730 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~--------~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~ 730 (885)
.+|++.+.||+|+||.||+|++.. +..||+|.+..... .....+.+|+++++++ +||||+++++++..++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 468999999999999999997531 23689998865332 2345788999999999 7999999999999888
Q ss_pred eeEEEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~ 795 (885)
..+++|||+++++|.+++..+. ..+++..+..++.|+++|++||| +.|++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEc
Confidence 9999999999999999987532 23678889999999999999999 99999999999999999
Q ss_pred CCCcEEEeeccCcccccCCCCCc-ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 796 DYFEAKVSDFGLARLISDCESHV-STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 796 ~~~~vkl~Dfg~a~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.++.++|+|||.++......... .....++..|+|||+..+..++.++|||||||++|||++ |..||..
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 239 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 239 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999987654322111 112233467999999999999999999999999999998 8888754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=249.87 Aligned_cols=201 Identities=17% Similarity=0.212 Sum_probs=154.4
Q ss_pred eeEEeecceecccCCceEEEEEeCCC----CeEEEEEeccccccc-----------HHHHHHHHHHhcccCCCCccceee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQ----KTVAVKKLSQATGQC-----------DREFAAEMETLDMVKHQNLVQLLG 724 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~----~~valK~~~~~~~~~-----------~~~~~~E~~~l~~l~~~~i~~~~~ 724 (885)
..+|++.++||+|+||.||+|.+.+. ..+|+|+........ ......+...++.+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 35799999999999999999987553 445555433221110 011223344556778999999998
Q ss_pred eeEeCC----eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcE
Q 047790 725 YCSVGE----EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA 800 (885)
Q Consensus 725 ~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~v 800 (885)
...... ..+++++++ ..++.+.+... ...++..+..++.|++.|++|+| +.+|+||||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKL-VENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeeEecCCceEEEEEEehh-ccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcE
Confidence 765433 457888887 44777766543 23577888999999999999999 8999999999999999999999
Q ss_pred EEeeccCcccccCCCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 801 KVSDFGLARLISDCESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+++|||+|+.+...... ......+|+.|+|||+..+..++.++||||+||++|||++|+.||...
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~ 236 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF 236 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 99999999876432211 112245899999999999999999999999999999999999999765
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=248.00 Aligned_cols=197 Identities=25% Similarity=0.328 Sum_probs=167.3
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
|++.++||.|++|.||+|.+. +++.||+|++..... .....+.+|+++++.++||+++++++++.+++..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 678899999999999999865 689999999865432 22356888999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+ +++.+++.... ..+++..+..++.|++++++||| +.+++|||++|+||+++.++.++++|||.+..+......
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~- 155 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT- 155 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc-
Confidence 4 68999887543 35899999999999999999999 899999999999999999999999999998765432211
Q ss_pred ccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||++.+. .++.++|+||+|+++|+|++|+.||..
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 202 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPG 202 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 1223457889999987664 568899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-27 Score=250.60 Aligned_cols=200 Identities=25% Similarity=0.388 Sum_probs=167.2
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEe------CCe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSV------GEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~------~~~ 731 (885)
.+.|++.+.+|+|+||.||+|... +++.+|+|.+.... ....++..|+.+++++ +||||+++++++.. ...
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 93 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ 93 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence 357999999999999999999874 47889999886543 2345688899999988 69999999998853 457
Q ss_pred eEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.+++|||+++++|.+++... ...+++..++.++.|+++|++||| +.+++|+|++|+||++++++.++++|||.+..
T Consensus 94 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 94 LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 89999999999999998753 344788889999999999999999 89999999999999999999999999999876
Q ss_pred ccCCCCCcccCCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
...... ......++..|+|||.+. +..++.++|+||+||++|||++|+.||..
T Consensus 171 ~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~ 228 (282)
T cd06636 171 LDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCD 228 (282)
T ss_pred hhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccc
Confidence 532211 122345788999999875 34678899999999999999999999964
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=247.95 Aligned_cols=196 Identities=23% Similarity=0.269 Sum_probs=164.1
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccC-CCCccceeeeeEeC--CeeEEEEe
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVK-HQNLVQLLGYCSVG--EEKLLVYE 737 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~--~~~~lv~e 737 (885)
|++.++||+|+||.||+|... +++.||+|+++.... .......+|+.+++++. |||++++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 678899999999999999865 588899999876432 22334557888888886 99999999999877 88999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|++ +++.+.+......+++..+..++.|++.|++||| +.+++||||+|+||+++. +.++++|||.+........
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~- 154 (282)
T cd07831 81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP- 154 (282)
T ss_pred cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCCC-
Confidence 996 5888888765556899999999999999999999 899999999999999999 9999999999877643222
Q ss_pred cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||+... ..++.++|+||+||++|||++|+.||...
T Consensus 155 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~ 202 (282)
T cd07831 155 -YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGT 202 (282)
T ss_pred -cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCC
Confidence 123457889999997654 55688999999999999999999999643
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=243.20 Aligned_cols=200 Identities=25% Similarity=0.335 Sum_probs=175.8
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeEEEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKLLVY 736 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~ 736 (885)
+|.+.+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++||+|+++++.+... ...++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3778899999999999999876 688999999876542 3456788999999999999999999999887 8899999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||+++++|.+++.... .+++..+..++.|++.+++||| +.+++|+|++|+||+++.++.++|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 9999999999998654 6899999999999999999999 89999999999999999999999999999887654322
Q ss_pred C-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 H-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ......++..|+|||...+..++.++||||+|+++|++++|..||...
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSEL 206 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1 123456788999999999988999999999999999999999999754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=243.17 Aligned_cols=200 Identities=24% Similarity=0.331 Sum_probs=175.5
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|.+.+.||+|++|.||+|.+. +++.+|+|++..... .....+.+|+++++.++|||++++.+.+..+...++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4788999999999999999875 588899999875432 3456788999999999999999999999988999999999
Q ss_pred ccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 739 MVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 739 ~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
+++++|.+++... ...+++..+..++.+++.++++|| +.|++|+|++|+||++++++.++++|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999999999864 366899999999999999999999 8999999999999999999999999999987765422
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......++..|+|||...+..++.++|+||+|+++|+|++|+.||...
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 206 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGE 206 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCC
Confidence 2223346788899999999888999999999999999999999998643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=215.33 Aligned_cols=195 Identities=26% Similarity=0.358 Sum_probs=168.0
Q ss_pred EeecceecccCCceEEEEEeCC-CCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
|.-.++||+|.+|.||+|+..+ ++.||+|.+.... ........+|+-+++.++|+||++++++...++...+|+|||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c 83 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence 4456789999999999998654 8889999987543 233456789999999999999999999998889999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
..+|..+...-.+.++.+.++.+..|++.++.++| +..+.|||+||+|.++..+|++|++|||+++.++-+..-.+
T Consensus 84 -dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 84 -DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred -hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 55999999887777999999999999999999999 99999999999999999999999999999998875433222
Q ss_pred cCCCCCCccCCcccccCCC-CCCcchhHHHHHHHHHHHhCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGR-ANERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~P~ 862 (885)
...-|.+|.||+++.+.+ |++..|+||.||++.|+.....|.
T Consensus 160 -aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrpl 202 (292)
T KOG0662|consen 160 -AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202 (292)
T ss_pred -ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCC
Confidence 345789999999988865 789999999999999998755554
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-27 Score=248.17 Aligned_cols=195 Identities=31% Similarity=0.516 Sum_probs=163.1
Q ss_pred ceecccCCceEEEEEeCC-------CCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 667 NVIGGGGFRTAFKGTMPD-------QKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~-------~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+.||+|+||.||+|+..+ ++.+|+|.+.... ......+.+|+++++.++||+|+++++++..++..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 468999999999998653 2568889876543 23356788999999999999999999999988899999999
Q ss_pred ccCCCHHHHHhhc------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-----cEEEeeccC
Q 047790 739 MVNGSLDDWLRNR------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-----EAKVSDFGL 807 (885)
Q Consensus 739 ~~~~sL~~~l~~~------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-----~vkl~Dfg~ 807 (885)
+++++|.+++... ...+++..+..++.|++.+++|+| +.+++|+|++|+||+++.++ .++++|||.
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999998742 233788899999999999999999 89999999999999999877 899999999
Q ss_pred cccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 808 ARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 808 a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+......... .......+..|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~ 216 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPA 216 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcc
Confidence 8765432211 1122345678999999999999999999999999999998 9999853
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=248.45 Aligned_cols=197 Identities=23% Similarity=0.352 Sum_probs=163.3
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHH-hcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMET-LDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~-l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.+.||+|+||.||+|.+. +++.||+|++..... ....++..|+.+ ++...||||+++++++..++..+++|||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 5889999999999999999875 589999999875432 233455556665 5667899999999999988999999999
Q ss_pred ccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 739 MVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 739 ~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
++ +++.+++.. ....+++..+..++.|++.+++||| +. +++||||||+||+++.++.+||+|||.+..+...
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 95 688887754 2345899999999999999999999 76 9999999999999999999999999998765432
Q ss_pred CCCcccCCCCCCccCCcccccC----CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQA----GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.......++..|+|||++.+ ..++.++|+||+||++|+|++|+.||..
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (283)
T cd06617 158 --VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS 209 (283)
T ss_pred --cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence 11222457888999998765 4568899999999999999999999863
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-27 Score=251.00 Aligned_cols=198 Identities=24% Similarity=0.338 Sum_probs=167.9
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
|++.+.||.|++|.||+|+.. +++.||+|++..... .....+.+|++++++++||||+++++++..++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 788999999999999999875 588999998864332 22357889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
. +++.+++.. ....+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++++|||.+........ .
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~-~ 156 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-T 156 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-c
Confidence 5 688888864 2345899999999999999999999 89999999999999999999999999999876543221 1
Q ss_pred ccCCCCCCccCCcccccCCC-CCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGR-ANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||+..+.. ++.++||||+|+++|+|+||+.||...
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 204 (284)
T cd07860 157 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 204 (284)
T ss_pred cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 22334678899999877644 588999999999999999999998643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=251.56 Aligned_cols=202 Identities=26% Similarity=0.348 Sum_probs=167.6
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCC------
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGE------ 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~------ 730 (885)
+.+|++.++||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||+|+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457999999999999999999875 588999998864332 22345678999999999999999999876543
Q ss_pred --eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 731 --EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 731 --~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
..++||||+. +++.+.+......+++..+..++.|+++|++||| +.|++|+||||+||+++.++.++++|||.+
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 4599999995 5888888766556899999999999999999999 899999999999999999999999999998
Q ss_pred ccccCCCCC---cccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESH---VSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..+...... ......++..|+|||++.+. .++.++|+||+|+++|||++|+.||...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 876432211 11233467889999987664 4688999999999999999999998653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-30 Score=257.77 Aligned_cols=418 Identities=22% Similarity=0.228 Sum_probs=243.4
Q ss_pred CCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeec-cCCCCCCCccccCCccCceEEcc
Q 047790 90 LRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS-NSFTGEMPSELGDIKQLKSLDFS 168 (885)
Q Consensus 90 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~Ls 168 (885)
-+.++|..|+|+...|..|+.+++|++||||+|+|+.+-|++|.++.+|.+|-+.+ |+|+......|++|..|+.|.+.
T Consensus 69 tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 69 TVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred ceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcC
Confidence 45677777777776777777777777777777777777777777777766655544 77774444567777777777777
Q ss_pred CCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccc
Q 047790 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLS 248 (885)
Q Consensus 169 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~ 248 (885)
-|++.-+..++|..+++|..|.+.+|.+. .++...|..+..++.+.+..|.+. ...+++.+....
T Consensus 149 an~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~i-----cdCnL~wla~~~--------- 213 (498)
T KOG4237|consen 149 ANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFI-----CDCNLPWLADDL--------- 213 (498)
T ss_pred hhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccc-----cccccchhhhHH---------
Confidence 77777666677777777777777777776 677666777777777777777643 122222222111
Q ss_pred ccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCccccccccc-CCcceeeccccccCCCCC
Q 047790 249 LFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRC-TNLSELVLVNNRISGSIP 327 (885)
Q Consensus 249 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p 327 (885)
...|.+++.........+.++++. .+.+..|.-. ..+..=..+.....+.-|
T Consensus 214 ---a~~~ietsgarc~~p~rl~~~Ri~------------------------q~~a~kf~c~~esl~s~~~~~d~~d~~cP 266 (498)
T KOG4237|consen 214 ---AMNPIETSGARCVSPYRLYYKRIN------------------------QEDARKFLCSLESLPSRLSSEDFPDSICP 266 (498)
T ss_pred ---hhchhhcccceecchHHHHHHHhc------------------------ccchhhhhhhHHhHHHhhccccCcCCcCh
Confidence 111222222233333333333333 3333322111 111111111111111111
Q ss_pred cccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccc
Q 047790 328 EYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNI 407 (885)
Q Consensus 328 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 407 (885)
...|..+++|+.|++++|+|+.+-+.+|.++..+++|+|..|+|..+....|.++..|
T Consensus 267 ----------------------~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L 324 (498)
T KOG4237|consen 267 ----------------------AKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGL 324 (498)
T ss_pred ----------------------HHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccc
Confidence 1235555666666666666666666677777778888888888877777778888888
Q ss_pred cceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEE--eecCCcccCCCchhcccCCCCCEEeccCccccCC-
Q 047790 408 QILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYL--LLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS- 484 (885)
Q Consensus 408 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l--~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~- 484 (885)
++|+|.+|+|+...|..|..+.+|.+|.|-.|.+.....+.|| +|..+.-.|..| -+.-..++.++++++.+...
T Consensus 325 ~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~--Cq~p~~~~~~~~~dv~~~~~~ 402 (498)
T KOG4237|consen 325 KTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPR--CQSPGFVRQIPISDVAFGDFR 402 (498)
T ss_pred eeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCC--CCCCchhccccchhccccccc
Confidence 8888888888888888888888888888888888765555443 344444232222 22334566667776665421
Q ss_pred --CCCCcccccccceeeeccccceeccccccc---cc--cCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccc
Q 047790 485 --IPPEFGDSLKVQGLYLGHNQLTGSIPESLG---YL--SGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNK 557 (885)
Q Consensus 485 --~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~---~l--s~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~ 557 (885)
-|++.+-. -++.-|..-. .. -.|+....+|..+- ..-+. +|+.+|.
T Consensus 403 c~~~ee~~~~------------~s~~cP~~c~c~~tVvRcSnk~lk~lp~~iP--~d~te-------------lyl~gn~ 455 (498)
T KOG4237|consen 403 CGGPEELGCL------------TSSPCPPPCTCLDTVVRCSNKLLKLLPRGIP--VDVTE-------------LYLDGNA 455 (498)
T ss_pred cCCccccCCC------------CCCCCCCCcchhhhhHhhcccchhhcCCCCC--chhHH-------------Hhcccch
Confidence 12211110 0011111000 00 01111112221111 11223 4444555
Q ss_pred cccccchhccCcccccccccccccCCCCCCccccCccccceeecccC
Q 047790 558 FYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADN 604 (885)
Q Consensus 558 l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N 604 (885)
++ .+|.+ .+..| .+|+|+|+++..--..|.+|++|.+|-|++|
T Consensus 456 ~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 456 IT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 55 77877 67788 8999999998666667888999999888876
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=251.44 Aligned_cols=201 Identities=26% Similarity=0.319 Sum_probs=165.9
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCC------
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGE------ 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~------ 730 (885)
..+|++.++||+|++|.||+|.+. +++.+|+|++...... ....+.+|+++++.++||+|+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999865 5888999988654322 2346778999999999999999999875433
Q ss_pred --eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 731 --EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 731 --~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
..++||||+. +++...+......+++..+..++.|+++|++|+| +.|++|+|+||+||++++++.++++|||.+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccc
Confidence 4689999995 4787777765556999999999999999999999 999999999999999999999999999998
Q ss_pred ccccCCCCCc----------ccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 809 RLISDCESHV----------STDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 809 ~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.......... .....++..|+|||++.+ ..++.++||||+||++|||++|+.||.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~ 229 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQG 229 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCC
Confidence 7654321111 112245778999998765 4578999999999999999999999864
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=254.59 Aligned_cols=199 Identities=26% Similarity=0.333 Sum_probs=166.0
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeC-----Cee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG-----EEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~~ 732 (885)
..+|++.++||+|++|.||+|.+. +++.||+|++.... .....++.+|++++++++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 467999999999999999999864 58899999986432 22345678899999999999999999987543 357
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++++||+. +++.+.+.. ..+++..++.++.|++.|+++|| +.||+||||||+||+++.++.++++|||.+....
T Consensus 84 ~lv~e~~~-~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 84 YIVQELME-TDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEehhcc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 99999995 588887754 34899999999999999999999 9999999999999999999999999999987764
Q ss_pred CCCCC--cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 813 DCESH--VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 813 ~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..... ......++..|+|||.+.+ ..++.++||||+||++|+|++|+.||..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~ 212 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPG 212 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 32221 1123457889999998654 5688999999999999999999999954
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=247.39 Aligned_cols=200 Identities=28% Similarity=0.391 Sum_probs=173.4
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 736 (885)
+|++.+.||+|++|.||+|... +++.||+|++.... ......+.+|++++++++ ||||+++++++..++..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 5889999999999999999865 68899999986532 223456788999999998 999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||+++++|.+++.... .+++..+..++.|++.++++|| +.|++|+|++|+||+++.++.++++|||.+........
T Consensus 82 e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 82 EYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence 9999999999998653 5899999999999999999999 89999999999999999999999999999876643221
Q ss_pred -------------------CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 -------------------HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......++..|+|||+..+..++.++|+||+|++++++++|+.||...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 225 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGS 225 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCc
Confidence 1122334678899999999888999999999999999999999998743
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-26 Score=242.65 Aligned_cols=198 Identities=23% Similarity=0.332 Sum_probs=172.8
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.++||+|++|.||+|.+. +++.+|+|.+.... ......+.+|++++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4889999999999999999765 57889999987543 22345677899999999999999999999988999999999
Q ss_pred ccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 739 MVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 739 ~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
+++++|.+++... ...+++..++.++.|++.|++|+| +.|++|+||+|+||+++.++.++++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998752 345889999999999999999999 999999999999999999999999999998876543
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||...+..++.++|+||+|+++|++++|+.||...
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~ 204 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEAR 204 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 222345788999999999988999999999999999999999998743
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=254.02 Aligned_cols=199 Identities=24% Similarity=0.325 Sum_probs=167.5
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEe----CCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSV----GEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~----~~~~~ 733 (885)
..|++.+.||+|++|.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 57999999999999999999865 48899999987543 2234667889999999999999999998753 34679
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+. +++.+++... ..+++..+..++.|+++|++||| +.+++||||||+||+++.++.+||+|||.+..+..
T Consensus 85 lv~e~~~-~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 159 (334)
T cd07855 85 VVMDLME-SDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSS 159 (334)
T ss_pred EEEehhh-hhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeecc
Confidence 9999995 6899988754 34899999999999999999999 89999999999999999999999999999876543
Q ss_pred CCCC---cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESH---VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~ 214 (334)
T cd07855 160 SPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPG 214 (334)
T ss_pred cCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCC
Confidence 2211 1123467889999998766 4678999999999999999999999954
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=246.26 Aligned_cols=198 Identities=27% Similarity=0.344 Sum_probs=169.5
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEe--CCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSV--GEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e 737 (885)
.|++.++||.|++|.||+|... +++.+|+|.+..... ....++.+|+++++.++||||+++++++.. .+..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 5888999999999999999875 478899998875432 234678899999999999999999998854 346899999
Q ss_pred cccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 738 YMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 738 ~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|+++++|.+++.. ....+++..+..++.|++.+++|+| +.+++|+|++|+||+++.++.++++|||.+......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999987653 3445788999999999999999999 999999999999999999999999999998765432
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. .....++..|+|||...+..++.++||||+|+++|+|++|+.||...
T Consensus 159 ~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (287)
T cd06621 159 L---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE 206 (287)
T ss_pred c---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 1 12345678899999999999999999999999999999999999754
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.6e-27 Score=252.12 Aligned_cols=202 Identities=29% Similarity=0.346 Sum_probs=168.6
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCC-----
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE----- 730 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----- 730 (885)
....|++.+.||+|++|.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 3457999999999999999999876 48889999986543 223456778999999999999999999886544
Q ss_pred -----eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeec
Q 047790 731 -----EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDF 805 (885)
Q Consensus 731 -----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Df 805 (885)
..++||||+++ ++.+.+......+++..+..++.|++.|++||| +.||+||||+|+||++++++.+|++||
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~df 160 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADF 160 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCcc
Confidence 78999999965 777777765556899999999999999999999 899999999999999999999999999
Q ss_pred cCcccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 806 GLARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 806 g~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
|.+...............++..|+|||++.+ ..++.++||||+||++|++++|+.||..
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~ 220 (302)
T cd07864 161 GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQA 220 (302)
T ss_pred cccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 9988765432222222345778999998765 3568899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=248.02 Aligned_cols=198 Identities=26% Similarity=0.312 Sum_probs=168.5
Q ss_pred EeecceecccCCceEEEEEeC----CCCeEEEEEecccc----cccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeE
Q 047790 663 IVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQAT----GQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~----~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~ 733 (885)
|++.+.||+|++|.||+|+.. +++.||+|.+.+.. .....++.+|++++++++ ||+|+++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 788999999999999998743 57889999986532 123456889999999995 899999999999889999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++... ..+++..+..++.|++++++||| +.+++||||+|+||+++.++.++++|||.+.....
T Consensus 82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 82 LILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence 999999999999998754 34889999999999999999999 89999999999999999999999999999876543
Q ss_pred CCCCcccCCCCCCccCCcccccCCC--CCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGR--ANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..........++..|+|||...+.. .+.++|+||+|+++|+|++|+.||..
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 210 (288)
T cd05583 158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV 210 (288)
T ss_pred ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCccc
Confidence 3222223345788999999987755 78899999999999999999999863
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=244.67 Aligned_cols=195 Identities=24% Similarity=0.395 Sum_probs=155.5
Q ss_pred ceecccCCceEEEEEeCCCC---eEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCC
Q 047790 667 NVIGGGGFRTAFKGTMPDQK---TVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~---~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
+.||+|+||.||+|...++. .+++|.+.... ....+.+.+|+.+++.++||||+++++.+......++||||++++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 36899999999999754433 45566655433 233567899999999999999999999999888999999999999
Q ss_pred CHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC-CCc
Q 047790 743 SLDDWLRNRA---ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-SHV 818 (885)
Q Consensus 743 sL~~~l~~~~---~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~-~~~ 818 (885)
+|.+++.... ...+...+..++.|+++|++|+| +.+++||||||+||+++.++.++++|||.+....... ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 9999987532 23566778899999999999999 8999999999999999999999999999875432211 112
Q ss_pred ccCCCCCCccCCcccccC-------CCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQA-------GRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.....++..|+|||+... ..++.++|||||||++|||++ |..||..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~ 211 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSH 211 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Confidence 223457788999998753 245788999999999999997 5667753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.9e-28 Score=244.40 Aligned_cols=208 Identities=23% Similarity=0.297 Sum_probs=172.1
Q ss_pred eEeeceeeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCC--C----Cccceee
Q 047790 652 IVVGSVLVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKH--Q----NLVQLLG 724 (885)
Q Consensus 652 ~~~g~~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~--~----~i~~~~~ 724 (885)
+.+|+++ ..+|++.+++|+|+||.|-++-+.. +..||+|+++.-. ...+...-|+++++++.+ | -++.+.+
T Consensus 81 ~~~gD~l-~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~ 158 (415)
T KOG0671|consen 81 YQVGDIL-TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRD 158 (415)
T ss_pred EEecccc-ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeeh
Confidence 3455554 6799999999999999999996544 6889999886432 334556678999999952 2 3777788
Q ss_pred eeEeCCeeEEEEecccCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-------
Q 047790 725 YCSVGEEKLLVYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND------- 796 (885)
Q Consensus 725 ~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~------- 796 (885)
+|...++.|+|+|.+ |.|+.+++.. ...+++..+++.++.|+++++++|| +.+++|.|+||+||++..
T Consensus 159 wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~ 234 (415)
T KOG0671|consen 159 WFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTY 234 (415)
T ss_pred hhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEe
Confidence 899999999999988 7799999986 4556899999999999999999999 999999999999999932
Q ss_pred -------------CCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 797 -------------YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 797 -------------~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
...++++|||.|+.... .......|..|.|||++.+-+++.++||||+|||++|++||...|.
T Consensus 235 ~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e----~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq 310 (415)
T KOG0671|consen 235 NPKKKVCFIRPLKSTAIKVIDFGSATFDHE----HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQ 310 (415)
T ss_pred ccCCccceeccCCCcceEEEecCCcceecc----CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecc
Confidence 23589999999976432 2245678999999999999999999999999999999999999998
Q ss_pred CCCCCC
Q 047790 864 PEFEDK 869 (885)
Q Consensus 864 ~~~~~~ 869 (885)
.....|
T Consensus 311 tHen~E 316 (415)
T KOG0671|consen 311 THENLE 316 (415)
T ss_pred cCCcHH
Confidence 655333
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.4e-27 Score=255.52 Aligned_cols=199 Identities=28% Similarity=0.350 Sum_probs=171.6
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCC-----eeE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE-----EKL 733 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 733 (885)
+|++.+.||+|++|.||+|...+ ++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 48899999999999999998764 8899999987643 334567889999999999999999999987764 789
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
++|||++ +++.+++.... .+++..++.++.|++.|+++|| +.||+||||||+||+++.++.++++|||.+.....
T Consensus 81 lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred EEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 9999996 58988887544 6899999999999999999999 99999999999999999999999999999987654
Q ss_pred CCC--CcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CES--HVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... .......++..|+|||++.+. .++.++|+||+|+++|+|++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~ 210 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGR 210 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCC
Confidence 321 122334578889999999888 7899999999999999999999999654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-26 Score=248.27 Aligned_cols=194 Identities=28% Similarity=0.391 Sum_probs=166.4
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.|...+.||+|+||.||+|... ++..+|+|.+..... ....++.+|++++++++|||++++++++..+...++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3778899999999999999865 588899998864322 223468889999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+. |++.+.+......+++..+..++.|++.++.||| +.+++|||++|+||+++.++.++++|||.+.....
T Consensus 106 ~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---- 177 (317)
T cd06635 106 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP---- 177 (317)
T ss_pred CCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCC----
Confidence 996 4888877655566899999999999999999999 99999999999999999999999999998865432
Q ss_pred cccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||++. ...++.++||||+||++|||++|+.||..
T Consensus 178 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~ 226 (317)
T cd06635 178 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 226 (317)
T ss_pred -cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 12345778899999874 45688999999999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-26 Score=250.82 Aligned_cols=200 Identities=26% Similarity=0.343 Sum_probs=167.9
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC-----C
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG-----E 730 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~ 730 (885)
+..+|.+.+.||+|+||.||+|... +++.||+|.+.... .....++.+|+.+++.++||||+++++++... .
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 3457999999999999999999864 58899999987532 22345677899999999999999999987643 3
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..++|+||+. ++|.+++... ..+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++|+|||.+..
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 4799999995 6898888754 45899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..... .......++..|+|||.+.. ..++.++|+||+||++|+|++|+.||..
T Consensus 158 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 211 (337)
T cd07858 158 TSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPG 211 (337)
T ss_pred cCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCC
Confidence 64422 12223457888999998765 4688999999999999999999999864
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-27 Score=218.54 Aligned_cols=197 Identities=23% Similarity=0.336 Sum_probs=163.7
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEecc
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..-...||+|++|.|-+-++. .|...|+|.+..... +...+...|+.+..+. .+|+++.+|+........++-||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 445678999999998777654 588999999875543 3456777888886544 5899999999888888899999999
Q ss_pred cCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 740 VNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 740 ~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
..|+..+... +++.+++..+-+||..+.+|+.|||. +..++|||+||.||+++.+|+||+||||.+-...++-
T Consensus 128 -~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi- 203 (282)
T KOG0984|consen 128 -DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI- 203 (282)
T ss_pred -hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhh-
Confidence 5588877653 67779999999999999999999996 7889999999999999999999999999987765422
Q ss_pred CcccCCCCCCccCCcccccC----CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQA----GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
+-+...|-..|+|||.+.. ..|+.++||||+|++++||.++++||..
T Consensus 204 -Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 204 -AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred -HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 1222457778999998765 4789999999999999999999999864
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-26 Score=238.19 Aligned_cols=145 Identities=24% Similarity=0.326 Sum_probs=123.9
Q ss_pred ceeEEEeEeeceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC--------C
Q 047790 646 KLALVGIVVGSVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK--------H 716 (885)
Q Consensus 646 ~~~~~g~~~g~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~--------~ 716 (885)
+++.+.+.+|.++..++|.+.++||+|-|++||.|.+. ..+-||+|+.+.+. ...+-...||+++++++ .
T Consensus 63 kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~ 141 (590)
T KOG1290|consen 63 KGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGK 141 (590)
T ss_pred cCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 56778888999999999999999999999999999654 56778899886543 22355678999999886 2
Q ss_pred CCccceeeeeEe----CCeeEEEEecccCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCc
Q 047790 717 QNLVQLLGYCSV----GEEKLLVYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSN 791 (885)
Q Consensus 717 ~~i~~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~N 791 (885)
.+|+++++.|.. +.+.|||+|++ |.+|..+|.. ..+.++...+..|+.|++.+|.|||. ..||+|.||||+|
T Consensus 142 ~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPEN 218 (590)
T KOG1290|consen 142 KCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPEN 218 (590)
T ss_pred ceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcce
Confidence 479999999965 45889999999 8899999985 34459999999999999999999997 7899999999999
Q ss_pred EEE
Q 047790 792 ILL 794 (885)
Q Consensus 792 il~ 794 (885)
|++
T Consensus 219 vLl 221 (590)
T KOG1290|consen 219 VLL 221 (590)
T ss_pred eee
Confidence 999
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-27 Score=250.22 Aligned_cols=197 Identities=20% Similarity=0.250 Sum_probs=170.2
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc----c----cHHHHHHHHHHhcccC---CCCccceeeeeE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG----Q----CDREFAAEMETLDMVK---HQNLVQLLGYCS 727 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~----~----~~~~~~~E~~~l~~l~---~~~i~~~~~~~~ 727 (885)
+.+|.....+|+|+||.|+.|.++. ...|++|.+.++.. + ...-.-.|++||..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 4458999999999999999998765 66688888876531 1 1123557999999998 999999999999
Q ss_pred eCCeeEEEEecc-cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeecc
Q 047790 728 VGEEKLLVYEYM-VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFG 806 (885)
Q Consensus 728 ~~~~~~lv~e~~-~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg 806 (885)
+++++|++||-. +|-+|.++|+.+. .+++..+..|++|++.++++|| ++||+|||||-+|+.++.+|-+|++|||
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEeecc
Confidence 999999999986 3559999998554 4999999999999999999999 9999999999999999999999999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~ 863 (885)
.|..+.. ..+....||..|+|||++.+.+| ....|+|++|+++|-++....||.
T Consensus 716 saa~~ks---gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTKS---GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhcC---CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9887654 34556789999999999999988 567899999999999999999985
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-27 Score=248.58 Aligned_cols=199 Identities=29% Similarity=0.447 Sum_probs=173.9
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
++.+.++||.|.||.||.|.|+. .-.||||.++.. ....++|..|+.+|+.+.|||.+++.++|..+...|+|+|||.
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEeccc
Confidence 46677899999999999999987 556889988653 3556889999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 741 NGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 741 ~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+|+|.++++... ...+.-....+|.||..|+.||. .+.+||||+.++|.+|.++..||++|||+++.+..+.....
T Consensus 347 yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAH 423 (1157)
T KOG4278|consen 347 YGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAH 423 (1157)
T ss_pred CccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecc
Confidence 999999998643 33677778899999999999999 99999999999999999999999999999999876554444
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
...-....|.|||-+....++.++|||+|||++||+.| |-.||-+
T Consensus 424 AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG 469 (1157)
T KOG4278|consen 424 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 469 (1157)
T ss_pred cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC
Confidence 44455678999999999999999999999999999998 5556543
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=245.46 Aligned_cols=197 Identities=25% Similarity=0.313 Sum_probs=170.6
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
|++.+.||+|++|.||+|... +++.+++|.+...... ....+.+|++++++++||+|+++++++..+...+++|||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567889999999999999875 5888999998754422 3467888999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++ ++.+++......+++..+..++.|++++++||| +.+++|+|++|+||+++.++.++++|||.+....... ...
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~~ 155 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPY 155 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-ccc
Confidence 65 898888776566899999999999999999999 9999999999999999999999999999987765432 122
Q ss_pred cCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....++..|+|||...+. .++.++|+||+|+++|++++|+.||..
T Consensus 156 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~ 201 (283)
T cd05118 156 THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPG 201 (283)
T ss_pred cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 234577889999998876 789999999999999999999999854
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-26 Score=241.22 Aligned_cols=189 Identities=22% Similarity=0.260 Sum_probs=159.6
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHHh-cccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMETL-DMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~l-~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
+.||+|++|.||+|... +++.||+|.+.+.... ....+..|..++ ....|||++++++++..++..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56899999999999865 4889999998654321 122344454443 455799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|.+++.... .+++..+..++.|++.|+.|+| +.+++||||+|+||++++++.++++|||.+..... ...
T Consensus 82 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~ 152 (260)
T cd05611 82 GDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKK 152 (260)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc-----ccc
Confidence 99999997543 4889999999999999999999 89999999999999999999999999998875432 223
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..++..|+|||...+..++.++||||+|+++|++++|..||..
T Consensus 153 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 195 (260)
T cd05611 153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHA 195 (260)
T ss_pred CCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCC
Confidence 3577889999999888889999999999999999999999864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-28 Score=234.82 Aligned_cols=196 Identities=26% Similarity=0.332 Sum_probs=162.6
Q ss_pred eecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEeccc
Q 047790 664 VFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 664 ~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
+-...||.|+||.|++-.++ .|+..|+|+++.... .++.++..|.++..+- ++|+|+++|+....++..|+-||.|
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM- 145 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM- 145 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-
Confidence 33568999999999998765 499999999986553 4567788888876554 5899999999988889999999999
Q ss_pred CCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 741 NGSLDDWLRN----RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 741 ~~sL~~~l~~----~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
..|+..+... ....+++..+-+|......||.||.. ...|+||||||+||+++..|.||++|||.+-...+ .
T Consensus 146 d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~--S 221 (361)
T KOG1006|consen 146 DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD--S 221 (361)
T ss_pred hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHH--H
Confidence 5577766542 34558888999999999999999985 67899999999999999999999999998865443 2
Q ss_pred CcccCCCCCCccCCcccccCC--CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAG--RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.+.+...|-..|||||.+... +|+.++||||+|+++||+.||..||..
T Consensus 222 iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~ 271 (361)
T KOG1006|consen 222 IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK 271 (361)
T ss_pred HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch
Confidence 333445688899999988763 589999999999999999999999874
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-26 Score=250.27 Aligned_cols=199 Identities=24% Similarity=0.338 Sum_probs=164.7
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeC---------
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVG--------- 729 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--------- 729 (885)
..+|++.+.||+|+||.||+|... .++.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 368999999999999999999865 4889999998765555557788999999999999999999876543
Q ss_pred -----CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-CCCcEEEe
Q 047790 730 -----EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-DYFEAKVS 803 (885)
Q Consensus 730 -----~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-~~~~vkl~ 803 (885)
...++||||++ +++.+++.. ..+++..++.++.|+++|+.||| +.|++||||||+||+++ .++.++++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEEC
Confidence 35789999996 588888763 34889999999999999999999 99999999999999997 45578999
Q ss_pred eccCcccccCCCCCc--ccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 804 DFGLARLISDCESHV--STDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 804 Dfg~a~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
|||.+.......... .....++..|+|||++.. ..++.++|+||+||++|+|++|+.||..
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~ 221 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAG 221 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999987654321111 122346788999997654 5678899999999999999999999964
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-26 Score=246.50 Aligned_cols=196 Identities=26% Similarity=0.334 Sum_probs=166.1
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEe-CCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSV-GEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~~l 734 (885)
+..+|++.+.||+|+||.||+|... +++.||+|++.+.. ......+.+|++++++++||||+++++++.. ....++
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 5568999999999999999999865 68899999886533 2234678889999999999999999998865 457889
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
+|||+ ++++.+++.. ..++...+..++.|+++|++||| +.+++||||+|.||++++++.++++|||.+......
T Consensus 88 v~e~~-~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~ 161 (328)
T cd07856 88 VTELL-GTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ 161 (328)
T ss_pred Eeehh-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccccCCC
Confidence 99998 6689888764 34788888999999999999999 999999999999999999999999999998764321
Q ss_pred CCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||++.+ ..++.++|+||+|+++|++++|+.||..
T Consensus 162 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~ 208 (328)
T cd07856 162 ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPG 208 (328)
T ss_pred ----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 122346778999998766 5689999999999999999999999854
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=244.53 Aligned_cols=193 Identities=30% Similarity=0.396 Sum_probs=165.1
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
|...++||+|+||.||+|... +++.|++|++..... .....+.+|+++++.++|||++++++++.++...|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 666788999999999999864 588899999864332 2234678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+. +++.+++......+++..+..++.|++.+++||| +.|++|+|++|+||+++.++.++++|||.+.....
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----- 173 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----- 173 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-----
Confidence 95 5888888765666899999999999999999999 89999999999999999999999999998864322
Q ss_pred ccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||++. +..++.++||||+||++|+|++|+.||..
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~ 222 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 222 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 12345788899999874 45678899999999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=229.99 Aligned_cols=203 Identities=20% Similarity=0.272 Sum_probs=175.6
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHH---HHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDRE---FAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~---~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
+...+|.+.++||+|.|++|.+++... .+.+|+|+++++...+.++ ...|..+..+. +||+.+.+...|..+...
T Consensus 247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrl 326 (593)
T KOG0695|consen 247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRL 326 (593)
T ss_pred cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceE
Confidence 345789999999999999999998755 6779999998876554433 45677777766 589999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++|.||.+||+|--.++.+. .++++.++.+...|.-|+.||| ++||++||+|.+|++++.+|++|++|+|.++.--
T Consensus 327 ffvieyv~ggdlmfhmqrqr-klpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 327 FFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEEEecCcceeeehhhhh-cCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCC
Confidence 99999999999977776544 4899999999999999999999 9999999999999999999999999999987643
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+ .......+||+.|.|||++.+..|....|.|++||+|+||+.|+.||+..
T Consensus 403 ~~-gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 403 GP-GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred CC-CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 32 23345679999999999999999999999999999999999999999853
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9e-27 Score=266.62 Aligned_cols=195 Identities=24% Similarity=0.342 Sum_probs=157.7
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEe---------
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSV--------- 728 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--------- 728 (885)
..+|+..+.||+||||.||+++.+ ||+.||+|++.... ......+.+|++.+.+++||||+++|..+.+
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 345777889999999999999865 89999999997654 2234568899999999999999999943211
Q ss_pred --------------------------------------------------------------------------------
Q 047790 729 -------------------------------------------------------------------------------- 728 (885)
Q Consensus 729 -------------------------------------------------------------------------------- 728 (885)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred ----------------------C--------CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC
Q 047790 729 ----------------------G--------EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF 778 (885)
Q Consensus 729 ----------------------~--------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~ 778 (885)
. ...|+-||||+...+.++++.....-.....++++.+|++|++|+|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH--- 714 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH--- 714 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH---
Confidence 0 1238999999887777777653322257788999999999999999
Q ss_pred CCCceecCCCCCcEEEcCCCcEEEeeccCccccc-----------------CCCCCcccCCCCCCccCCcccccCCC---
Q 047790 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS-----------------DCESHVSTDTADTIGYVPSEYGQAGR--- 838 (885)
Q Consensus 779 ~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~-----------------~~~~~~~~~~~~~~~y~aPE~~~~~~--- 838 (885)
++||||||+||.|||++..+.|||+|||+|.... .......+...||.-|+|||++.+..
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~ 794 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK 794 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence 9999999999999999999999999999997621 01111334557999999999988865
Q ss_pred CCCcchhHHHHHHHHHHHh
Q 047790 839 ANERGDIYSFGVILLELVT 857 (885)
Q Consensus 839 ~~~~~DvwslGvvl~ellt 857 (885)
|+.|+|+||+|||++||+.
T Consensus 795 Yn~KiDmYSLGIVlFEM~y 813 (1351)
T KOG1035|consen 795 YNSKIDMYSLGIVLFEMLY 813 (1351)
T ss_pred ccchhhhHHHHHHHHHHhc
Confidence 8999999999999999984
|
|
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-26 Score=251.67 Aligned_cols=201 Identities=30% Similarity=0.402 Sum_probs=167.1
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhccc-CCCCccceeeeeEeC--Cee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVG--EEK 732 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~--~~~ 732 (885)
+..+|++.+.||+|+||.||+|.+. +++.+|+|++.... ......+.+|+++++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567999999999999999999875 57889999886432 22335677899999999 999999999988643 367
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||++ ++|.+++... .+++..+..++.|++.+++||| +.||+||||+|+||+++.++.++++|||.+....
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 99999996 5999988754 5888899999999999999999 8999999999999999999999999999987664
Q ss_pred CCCCC----cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESH----VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~----~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..... ......++..|+|||.+.+ ..++.++|+||+|+++|+|++|+.||...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~ 216 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGT 216 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCC
Confidence 32211 2223457889999998765 45788999999999999999999998643
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-26 Score=249.55 Aligned_cols=199 Identities=26% Similarity=0.317 Sum_probs=167.9
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCC---
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGE--- 730 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--- 730 (885)
|.+..+|++.+.||+|++|.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++..+.
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 445678999999999999999999754 688999999865322 22356789999999999999999999886543
Q ss_pred ---eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 731 ---EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 731 ---~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
..++||||+ ++++.+++.. ..+++..++.++.|+++|++||| +.||+||||||+||+++.++.++++|||.
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 458999999 7799988864 34899999999999999999999 99999999999999999999999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+...... .....++..|+|||.+.+ ..++.++|+||+||++|++++|+.||...
T Consensus 165 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 219 (343)
T cd07880 165 ARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGH 219 (343)
T ss_pred ccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 8765431 122356788999998876 45788999999999999999999999743
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-26 Score=241.66 Aligned_cols=199 Identities=22% Similarity=0.381 Sum_probs=162.9
Q ss_pred EeecceecccCCceEEEEEeC----CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCC------
Q 047790 663 IVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE------ 730 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~------ 730 (885)
|.+.++||+|+||.||+|.+. .++.||+|.+.... ....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 577899999999999999753 36789999987543 223456888999999999999999999876432
Q ss_pred eeEEEEecccCCCHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeec
Q 047790 731 EKLLVYEYMVNGSLDDWLRNR-----AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDF 805 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~-----~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Df 805 (885)
..++++||+.++++.+++... ...++...+..++.|++.+++||| +.+|+||||||+||+++.++.++++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 247889999999998876421 224788899999999999999999 899999999999999999999999999
Q ss_pred cCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 806 GLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 806 g~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
|.++........ ......++..|++||......++.++||||+|+++|++++ |+.||..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~ 218 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAG 218 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCC
Confidence 998876432211 1222334567999999998999999999999999999999 8888764
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-26 Score=247.25 Aligned_cols=198 Identities=21% Similarity=0.241 Sum_probs=163.7
Q ss_pred EeecceecccCCceEEEEEeCCCCeEEEEEeccc--ccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQA--TGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
|.+++.+|.|+++.||++.. +++.||+|++... .......+.+|++++++++||||+++++++..++..+++|||++
T Consensus 4 ~~i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~ 82 (314)
T cd08216 4 TLIGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMA 82 (314)
T ss_pred hhhhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccC
Confidence 44556666666666666654 6899999998754 23345679999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC--
Q 047790 741 NGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH-- 817 (885)
Q Consensus 741 ~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~-- 817 (885)
++++.+++... ...+++..+..++.|+++|++||| +.+|+||||||+||+++.++.++++|||.+..+......
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 83 YGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 99999998753 345889999999999999999999 999999999999999999999999999988755321111
Q ss_pred ----cccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 ----VSTDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ----~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......++..|+|||++.. ..++.++|+||+||++|||++|+.||..
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~ 212 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKD 212 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 1122346678999999876 3578999999999999999999999974
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-26 Score=250.44 Aligned_cols=201 Identities=25% Similarity=0.291 Sum_probs=166.3
Q ss_pred eeEEe-ecceecccCCceEEEEEeC-CCCeEEEEEeccccccc--------------HHHHHHHHHHhcccCCCCcccee
Q 047790 660 IAIIV-FENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQC--------------DREFAAEMETLDMVKHQNLVQLL 723 (885)
Q Consensus 660 ~~~~~-~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~--------------~~~~~~E~~~l~~l~~~~i~~~~ 723 (885)
..+|. +.+.||+|+||.||+|.+. +++.||+|++....... ...+.+|++++++++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 35565 5678999999999999865 58899999986543211 12477899999999999999999
Q ss_pred eeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEe
Q 047790 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVS 803 (885)
Q Consensus 724 ~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~ 803 (885)
+++..+...++||||+. +++.+++... ..+++..+..++.|++.|++||| +.|++||||+|+||+++.++.++++
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRK-IRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEEC
Confidence 99999999999999996 5999988753 34899999999999999999999 9999999999999999999999999
Q ss_pred eccCcccccCCC-------------CCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 804 DFGLARLISDCE-------------SHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 804 Dfg~a~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
|||.+....... ........++..|+|||++.+. .++.++|+||+||++|+|++|+.||...
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999987654110 1111123457789999988764 4689999999999999999999998654
|
|
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-26 Score=243.31 Aligned_cols=198 Identities=27% Similarity=0.319 Sum_probs=165.3
Q ss_pred EeecceecccCCceEEEEEeCC-CCeEEEEEecccccc--cHHHHHHHHHHhccc---CCCCccceeeeeEeCCe-----
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ--CDREFAAEMETLDMV---KHQNLVQLLGYCSVGEE----- 731 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~--~~~~~~~E~~~l~~l---~~~~i~~~~~~~~~~~~----- 731 (885)
|++.+.||+|++|.||+|++.. ++.||+|.+...... ....+.+|+.+++++ .||+++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6788999999999999999765 899999998744322 223566777777655 59999999999987666
Q ss_pred eEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.+++|||+. +++.+++.... ..+++..+..++.|+++|++||| +.+++|+|++|+||++++++.++++|||.+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 899999996 48988887533 35899999999999999999999 89999999999999999999999999999877
Q ss_pred ccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
+..... .....++..|+|||++.+..++.++|+||+||++|||++|+.||....
T Consensus 157 ~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~ 210 (287)
T cd07838 157 YSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS 210 (287)
T ss_pred ccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC
Confidence 643221 122346788999999999999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-26 Score=242.66 Aligned_cols=198 Identities=28% Similarity=0.357 Sum_probs=170.8
Q ss_pred EeecceecccCCceEEEEEeCC-CCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
|++.+.||+|++|.||+|...+ ++.+|+|.+.... ....+.+..|++++++++||+++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 5678899999999999998765 8899999987653 233467788999999999999999999999889999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+ ++|.+++......+++..+..++.|++.++++|| +.|++||||+|+||++++++.++++|||.+........ ..
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~~ 155 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-TY 155 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-cc
Confidence 7 5999999876456899999999999999999999 89999999999999999999999999999877654222 22
Q ss_pred cCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....+..|+|||.+.+. .++.++||||+||++||+++|+.||...
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 202 (282)
T cd07829 156 THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGD 202 (282)
T ss_pred CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 233456789999998776 7899999999999999999999998653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=247.62 Aligned_cols=198 Identities=27% Similarity=0.330 Sum_probs=164.7
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeC----
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVG---- 729 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---- 729 (885)
|-+..+|.+.+.||+|++|.||+|.+. +++.||+|++..... .....+.+|+++++.++||||+++++++...
T Consensus 11 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 90 (342)
T cd07879 11 WELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGD 90 (342)
T ss_pred hccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCC
Confidence 344568999999999999999999865 589999999875322 2235678999999999999999999988654
Q ss_pred --CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 730 --EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 730 --~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
...++|+||+. .++.++.. ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||.
T Consensus 91 ~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 91 EFQDFYLVMPYMQ-TDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred CCceEEEEecccc-cCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 24689999995 47776553 34889999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+...... .....++..|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 164 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~ 218 (342)
T cd07879 164 ARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218 (342)
T ss_pred CcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 8764321 122356788999998876 46889999999999999999999999753
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.9e-26 Score=243.67 Aligned_cols=200 Identities=23% Similarity=0.362 Sum_probs=166.6
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc-ccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG-QCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 735 (885)
....|++.+.||+|++|.||+|.+.+ ++.||+|.++.... .....+..|+.++.+.. ||||+++++++..+...+++
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 34568999999999999999999875 88999999875432 22345666777666665 99999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|||+ ++++.++.......+++..+..++.|++.+++||| + .+|+||||+|+||++++++.++|+|||.+..+...
T Consensus 93 ~e~~-~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 93 MELM-STCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eecc-CcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 9998 45888877765556899999999999999999999 6 59999999999999999999999999998765432
Q ss_pred CCCcccCCCCCCccCCcccccCCC----CCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGR----ANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
. ......++..|+|||++.+.. ++.++|+||||+++|+|++|+.||..
T Consensus 169 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 220 (296)
T cd06618 169 K--AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKN 220 (296)
T ss_pred C--cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCc
Confidence 2 122334678899999987654 78899999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-26 Score=249.99 Aligned_cols=196 Identities=29% Similarity=0.359 Sum_probs=165.1
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeC------
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVG------ 729 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~------ 729 (885)
+..+|++.+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|++++++++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 457799999999999999999975 4688999999875432 2245677899999999999999999987543
Q ss_pred CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
...+++++++ ++++.+++... .+++..++.++.|+++|++||| +.|++||||||+||++++++.++++|||.+.
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~ 168 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 168 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEecccccc
Confidence 3467888887 78998887643 4899999999999999999999 9999999999999999999999999999987
Q ss_pred cccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.... ......++..|+|||...+ ..++.++||||+||++|+|++|+.||..
T Consensus 169 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 169 HTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred cccc----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 6432 1223457888999998766 4678899999999999999999999854
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-26 Score=243.41 Aligned_cols=197 Identities=26% Similarity=0.342 Sum_probs=167.7
Q ss_pred EeecceecccCCceEEEEEeCC-CCeEEEEEecccccc-cHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEEecc
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ-CDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
|++.+.||+|++|.||+|...+ ++.|++|++...... ......+|+..+++++ ||+++++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 6788999999999999998764 788999998754322 2334567899999999 999999999999999999999999
Q ss_pred cCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++.+.+.... ..+++..+..++.|++.++.||| +.+++|+||+|+||++++++.++++|||.+....... .
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--~ 154 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--P 154 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC--C
Confidence 789998887543 45899999999999999999999 8999999999999999999999999999987664322 2
Q ss_pred ccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||++.+ ..++.++|+||||+++|++++|+.||...
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~ 202 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS 202 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence 233457889999998754 55789999999999999999999998644
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=234.83 Aligned_cols=192 Identities=27% Similarity=0.293 Sum_probs=167.5
Q ss_pred ecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCH
Q 047790 669 IGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSL 744 (885)
Q Consensus 669 lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL 744 (885)
||+|++|.||++... +++.+|+|.+...... ....+..|++++++++||+|+++++.+..+...+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999875 4889999998765422 345788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCC
Q 047790 745 DDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD 824 (885)
Q Consensus 745 ~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~ 824 (885)
.+++.... .+++..+..++.|+++++.|+| +.+++|+||+|+||+++.++.++++|||.+....... .......+
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~ 155 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCG 155 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCcC
Confidence 99998543 4899999999999999999999 8999999999999999999999999999987764321 12234567
Q ss_pred CCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 825 TIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 825 ~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+..|+|||...+..++.++|+||+|+++|++++|..||...
T Consensus 156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~ 196 (250)
T cd05123 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAE 196 (250)
T ss_pred CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 88999999999888999999999999999999999999643
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-26 Score=244.49 Aligned_cols=198 Identities=25% Similarity=0.316 Sum_probs=163.9
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.+.||+|+||.||++.+. +++.+|+|.+.... ......+.+|+.++.++. ||||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4677889999999999999865 48899999987543 233457888999999996 99999999999888889999999
Q ss_pred ccCCCHHHHHh----hcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 739 MVNGSLDDWLR----NRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 739 ~~~~sL~~~l~----~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
+. +++.++.. .....+++..+..++.|++.|++|+|+ +.+++||||||+||+++.++.++++|||.+......
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 85 46655432 123558999999999999999999992 359999999999999999999999999998765432
Q ss_pred CCCcccCCCCCCccCCcccccCC---CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAG---RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
. ......++..|+|||++.+. .++.++||||+||++|+|++|+.||..
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 212 (288)
T cd06616 162 I--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPK 212 (288)
T ss_pred C--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchh
Confidence 2 12233578889999998876 688999999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-28 Score=231.08 Aligned_cols=202 Identities=27% Similarity=0.375 Sum_probs=167.8
Q ss_pred eEEeecceecccCCceEEEEEeCC-CCeEEEEEecc--cccccHHHHHHHHHHhcccCCCCccceeeeeEe--------C
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQ--ATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV--------G 729 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--------~ 729 (885)
+.|+-..+||+|.||.||+|+.++ ++.||+|++-- +.........+|+++++.+.|+|++.+++.+.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 346667899999999999998765 77788776532 223344567899999999999999999988743 2
Q ss_pred CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
...|+||.+|+ .+|.-++..+...++..++.++..++..++.|+| +..|+|||+||+|++++.++.+|++|||+++
T Consensus 97 ~t~ylVf~~ce-hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 97 ATFYLVFDFCE-HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred ceeeeeHHHhh-hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 35799999995 4999999887778999999999999999999999 8899999999999999999999999999997
Q ss_pred cccCCCCCc---ccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 810 LISDCESHV---STDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 810 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.+..++... .+.+..|..|.+||.+.+ +.|+++.|+|+.||+|.||+||.+-+.+..
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnt 233 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNT 233 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCCh
Confidence 765433322 223445899999998776 578999999999999999999998876543
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-27 Score=220.45 Aligned_cols=213 Identities=17% Similarity=0.250 Sum_probs=174.5
Q ss_pred eceeeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeC--C
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVG--E 730 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~--~ 730 (885)
..|....+|++.+++|+|-++.||.|.. .+++.+++|+++... .+.+.+|++|++.+. ||||+.++++..+. .
T Consensus 32 i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sk 108 (338)
T KOG0668|consen 32 IDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESK 108 (338)
T ss_pred eeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCcccc
Confidence 3455778899999999999999999974 457789999986543 578899999999998 99999999998765 4
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-CCcEEEeeccCcc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-YFEAKVSDFGLAR 809 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-~~~vkl~Dfg~a~ 809 (885)
...+++||+...+.....+. ++..+++.+..+++.|+.|+| +.||.|||+||+|++++. .-.++++|||+|.
T Consensus 109 tpaLiFE~v~n~Dfk~ly~t----l~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAE 181 (338)
T KOG0668|consen 109 TPSLIFEYVNNTDFKQLYPT----LTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181 (338)
T ss_pred CchhHhhhhccccHHHHhhh----hchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHh
Confidence 56799999998888777653 777889999999999999999 999999999999999984 4468999999999
Q ss_pred cccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHH
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLM 881 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~~~~~~~~~l~~~~~~~ 881 (885)
.+.+.. ....+..+..|.-||.+-. +.|+..-|+|||||+++.|+..+.||-...+ ....+++.+..+
T Consensus 182 FYHp~~--eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~d--N~DQLVkIakVL 250 (338)
T KOG0668|consen 182 FYHPGK--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD--NYDQLVKIAKVL 250 (338)
T ss_pred hcCCCc--eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCC--CHHHHHHHHHHh
Confidence 887632 2233456678889997666 4678999999999999999999999864333 333566655443
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.6e-26 Score=238.22 Aligned_cols=197 Identities=22% Similarity=0.317 Sum_probs=164.2
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEecccc-----cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT-----GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~-----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+|.+.+.||+|+||.||+|.+.. +..+++|.++... .....++..|+.+++.++||||+++++++.++...++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 58899999999999999998654 3445555554321 22334677899999999999999999999888899999
Q ss_pred EecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 736 YEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
|||++++++.+++.. ....+++..++.++.|+++|++||| +.|++|+|++|+||++++ +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998863 3345899999999999999999999 999999999999999976 469999999987764
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
... .......++..|+|||...+..++.++|+||+|+++|++++|..||.
T Consensus 157 ~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~ 206 (260)
T cd08222 157 GSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFE 206 (260)
T ss_pred CCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 322 22233457788999999988888999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=232.79 Aligned_cols=180 Identities=24% Similarity=0.242 Sum_probs=153.1
Q ss_pred cCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCHHHHHhh
Q 047790 672 GGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRN 750 (885)
Q Consensus 672 G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~ 750 (885)
|.++.||+|.+. +++.||+|.+.... ....|...+....||||+++++++...+..+++|||+++++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 889999999875 58889999987643 223445555556799999999999999999999999999999999875
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCC
Q 047790 751 RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP 830 (885)
Q Consensus 751 ~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~a 830 (885)
.. .+++..+..++.|++++++|+| +.|++||||||+||+++.++.++++|||.+...... .....++..|+|
T Consensus 79 ~~-~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~a 150 (237)
T cd05576 79 FL-NIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCA 150 (237)
T ss_pred hc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccC
Confidence 43 4899999999999999999999 999999999999999999999999999987655431 122345677999
Q ss_pred cccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 831 SEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 831 PE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
||+..+..++.++|+||+|+++|||++|+.|+..
T Consensus 151 PE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~ 184 (237)
T cd05576 151 PEVGGISEETEACDWWSLGAILFELLTGKTLVEC 184 (237)
T ss_pred CcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence 9999888899999999999999999999987653
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=246.01 Aligned_cols=197 Identities=20% Similarity=0.296 Sum_probs=161.3
Q ss_pred cceeccc--CCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 666 ENVIGGG--GFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 666 ~~~lG~G--~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
++.||+| +|+.||+|.+. .++.||+|++..... ...+.+.+|+.+++.++||||+++++++..++..++||||+.
T Consensus 3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 4567777 88999999874 689999999865432 223578889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc-
Q 047790 741 NGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV- 818 (885)
Q Consensus 741 ~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~- 818 (885)
++++.+++... ...+++..++.++.|++.|++||| +.|++||||||+||+++.++.++++||+.+..........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 99999988753 234889999999999999999999 9999999999999999999999999998654332211110
Q ss_pred -----ccCCCCCCccCCcccccCC--CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 -----STDTADTIGYVPSEYGQAG--RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 -----~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~ 213 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDM 213 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 0112245669999998764 5789999999999999999999999754
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=244.36 Aligned_cols=199 Identities=25% Similarity=0.331 Sum_probs=163.2
Q ss_pred EEeecceecccCCceEEEEEeCC---CCeEEEEEecccccc--cHHHHHHHHHHhcccC-CCCccceeeeeEeC----Ce
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD---QKTVAVKKLSQATGQ--CDREFAAEMETLDMVK-HQNLVQLLGYCSVG----EE 731 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~---~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~----~~ 731 (885)
+|++.+.||+|+||.||+|+... ++.||+|++...... ...++.+|++++++++ ||||+++++..... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 37889999999999999998653 678999998653222 2456788999999995 99999999875432 45
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.+++++|+. ++|.+++... ..+++..++.++.|++.|++||| +.|++||||||+||+++.++.++|+|||.+..+
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 788999985 6899988643 45899999999999999999999 999999999999999999999999999999765
Q ss_pred cCCCCC---cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESH---VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...... ......++..|+|||+..+ ..++.++|+||+||++|++++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 432211 1123457889999998765 56899999999999999999999998653
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.2e-26 Score=233.15 Aligned_cols=193 Identities=28% Similarity=0.435 Sum_probs=161.1
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcc--cCCCCccceeeeeEeC----Cee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDM--VKHQNLVQLLGYCSVG----EEK 732 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~~~~~~~~----~~~ 732 (885)
+....++.+.||+|.||.||+|+|+ |+.||||++.... ++...+|.+|.+. ++|+||+.+++.-..+ .+.
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred hhheeEEEEEecCccccceeecccc-CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 4456788999999999999999995 5779999997643 5677888888875 5899999999876443 257
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc-----cCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH-----GFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~-----~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
|+|++|.+.|||.|++.+ .+++.....+++.-++.+|++||. ..+..|.|||||..||+|.+++.+.|+|+|+
T Consensus 285 wLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred EEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 999999999999999986 458999999999999999999993 2245699999999999999999999999999
Q ss_pred cccccCCC---CCcccCCCCCCccCCcccccCCC------CCCcchhHHHHHHHHHHHh
Q 047790 808 ARLISDCE---SHVSTDTADTIGYVPSEYGQAGR------ANERGDIYSFGVILLELVT 857 (885)
Q Consensus 808 a~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~------~~~~~DvwslGvvl~ellt 857 (885)
|.+..... ........||.+|||||++...- .-..+||||||.|+||+..
T Consensus 363 Av~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiar 421 (513)
T KOG2052|consen 363 AVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIAR 421 (513)
T ss_pred eEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHH
Confidence 98875532 22345677999999999987642 1346899999999999886
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-26 Score=247.48 Aligned_cols=195 Identities=24% Similarity=0.328 Sum_probs=164.9
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
....|++...+|.|+|+.|-.+.+. +++..++|++.+.. .+..+|+.++... .||||++..+.+.++.+.|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 3567999999999999999988754 57889999997763 2334566555544 5999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE-cCCCcEEEeeccCcccccCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL-NDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~-~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|.+.|+-+.+.+..... +. ..+..|+.+++.|+.||| .+|++|||+||+||++ +..++++|+|||.+....++
T Consensus 396 e~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hhccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 99999988887765332 22 666789999999999999 9999999999999999 58889999999999876543
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
....+-|..|+|||+.....|++++|+||+|+++|+|++|+.||...-
T Consensus 470 ---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P 517 (612)
T KOG0603|consen 470 ---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHP 517 (612)
T ss_pred ---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCC
Confidence 334567889999999999999999999999999999999999998543
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=249.42 Aligned_cols=199 Identities=26% Similarity=0.395 Sum_probs=169.8
Q ss_pred EEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEe-----CCeeEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSV-----GEEKLL 734 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~-----~~~~~l 734 (885)
.|+|.++||.|.+|.||+++..+ ++..|+|+..... ..+++++.|.+|++... |||++.+|+++.. ++..|+
T Consensus 20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL 98 (953)
T KOG0587|consen 20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL 98 (953)
T ss_pred ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence 48899999999999999998654 6667788765443 34678889999999885 8999999998853 468999
Q ss_pred EEecccCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 735 VYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
|||||.|||..+.+.. .+..+.++.+..|++.++.++.+|| ...++|||||-.||+++.++.||++|||.+.-...
T Consensus 99 VMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQlds 175 (953)
T KOG0587|consen 99 VMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS 175 (953)
T ss_pred EeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeeeeeeeec
Confidence 9999999999999885 4566999999999999999999999 89999999999999999999999999998766543
Q ss_pred CCCCcccCCCCCCccCCcccccC-----CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQA-----GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.........||++|||||++.- ..|+.++|+||+|++..||..|.+|+...
T Consensus 176 -T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm 231 (953)
T KOG0587|consen 176 -TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM 231 (953)
T ss_pred -ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc
Confidence 3334456789999999998764 35788999999999999999999998753
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=241.52 Aligned_cols=194 Identities=27% Similarity=0.386 Sum_probs=164.9
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.|...+.||+|++|.||+|+.. +++.+|+|.+.... .....++.+|+++++.++||+++++++++......++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3777889999999999999865 47889999886422 1223467789999999999999999999998899999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+. +++.+.+......+++..+..++.|++.++.||| +.+++||||+|+||+++.++.++++|||.+......
T Consensus 96 ~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 168 (308)
T cd06634 96 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 168 (308)
T ss_pred ccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc---
Confidence 996 5888877655556899999999999999999999 899999999999999999999999999998765431
Q ss_pred cccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....++..|+|||++. ...++.++||||+||++|++++|+.||..
T Consensus 169 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 216 (308)
T cd06634 169 --NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216 (308)
T ss_pred --ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcc
Confidence 2235778899999874 35678899999999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-25 Score=261.32 Aligned_cols=146 Identities=27% Similarity=0.380 Sum_probs=130.6
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+..|++.++||+|+||.||+|.+. +++.||+|++...... ....+..|+.+++.++||+|+++++++....+.|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 357999999999999999999876 5889999998754322 235688899999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
|||+.+++|.+++.... .+++..++.++.|++.||+||| ..+|+||||||+||+++.++.++|+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999997543 4888999999999999999999 8999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=233.74 Aligned_cols=193 Identities=30% Similarity=0.522 Sum_probs=159.9
Q ss_pred EeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhc--ccCCCCccceeeeeEeCC----eeEEEE
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLD--MVKHQNLVQLLGYCSVGE----EKLLVY 736 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~--~l~~~~i~~~~~~~~~~~----~~~lv~ 736 (885)
.++.+++|+|.||.||+|... ++.||||++.... .+.+.+|-+|.+ .++|+||++++++-+... .+++|+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt 287 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT 287 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence 566789999999999999874 4889999997644 556777777765 567999999999876544 789999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC------CCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF------KPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~------~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
+|.+.|+|.+++..+ .++|....+++.-++.+|+|||... +..|+|||||..||++.+++...|+|||+|.+
T Consensus 288 ~fh~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 288 EFHPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred eeccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 999999999999864 4999999999999999999999543 45699999999999999999999999999998
Q ss_pred ccCCCCC-cccCCCCCCccCCcccccCCC-C-----CCcchhHHHHHHHHHHHhCCCC
Q 047790 811 ISDCESH-VSTDTADTIGYVPSEYGQAGR-A-----NERGDIYSFGVILLELVTGKQP 861 (885)
Q Consensus 811 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~-~-----~~~~DvwslGvvl~elltg~~P 861 (885)
+.+.... ......||.+|||||++.+.- + -.+.||||+|.|+||++++..-
T Consensus 366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~ 423 (534)
T KOG3653|consen 366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTD 423 (534)
T ss_pred ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 8653211 122356999999999987752 1 2468999999999999996543
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-26 Score=235.78 Aligned_cols=204 Identities=27% Similarity=0.435 Sum_probs=168.7
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc-------cHHHHHHHHHHhcccCCCCccceeeeeEe-CC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ-------CDREFAAEMETLDMVKHQNLVQLLGYCSV-GE 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~-------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~ 730 (885)
..+|.+.++||+|||+.||+|.+- .++-||+|+-.-...+ ..++..+|.+|-+.+.||-|+++|++|.- .+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 357889999999999999999764 4777888876433221 23568899999999999999999999964 56
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc---CCCcEEEeeccC
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN---DYFEAKVSDFGL 807 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~---~~~~vkl~Dfg~ 807 (885)
..|-|.|||+|-+|.-++..+ +.+++..++.|+.||+.||.||... +..|+|=|+||.||++. .-|.+||+|||+
T Consensus 542 sFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 788999999999999888744 4589999999999999999999844 67799999999999995 457899999999
Q ss_pred cccccCCC------CCcccCCCCCCccCCcccccCC----CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCE------SHVSTDTADTIGYVPSEYGQAG----RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~----~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
++.+.++. ........||.+|+|||++--. +.+.+.||||+||++|.++.|+.||+..
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn 687 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN 687 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc
Confidence 99886532 1223445799999999976543 4578899999999999999999999753
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=244.74 Aligned_cols=196 Identities=29% Similarity=0.357 Sum_probs=166.5
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe----
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE---- 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~---- 731 (885)
...+|++.+.||+|++|.||+|+.. +++.||+|++.... ......+.+|++++++++|||++++.+++..++.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4567999999999999999999875 47889999886532 2233567789999999999999999998765554
Q ss_pred --eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 732 --KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 732 --~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
.++|+||+ +++|.+++.. ..+++..+..++.|++++++|+| +.||+||||+|+||+++.++.++|+|||.+.
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~ 166 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLAR 166 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEccccccc
Confidence 89999999 6799998874 34899999999999999999999 8999999999999999999999999999987
Q ss_pred cccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..... .....++..|+|||...+ ..++.++||||+||++|++++|+.||..
T Consensus 167 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~ 218 (343)
T cd07851 167 HTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPG 218 (343)
T ss_pred ccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 65432 223356788999998765 4678899999999999999999999964
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=223.26 Aligned_cols=199 Identities=31% Similarity=0.395 Sum_probs=172.7
Q ss_pred EeecceecccCCceEEEEEeCC-CCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
|.+.+.||+|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.++.++|++++++++++......++++|+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5678899999999999998876 889999999865544 56788999999999999999999999998899999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
+++|.+++......+++..+..++.+++.+++++| +.+++|+|++|.||+++.++.++++|||.+..+.........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK 157 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence 99999999864433789999999999999999999 889999999999999999999999999998876543211223
Q ss_pred CCCCCCccCCcccc-cCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 821 DTADTIGYVPSEYG-QAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 821 ~~~~~~~y~aPE~~-~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
...++..|++||.. ....++.++|+|++|++++++++|+.||..
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 34567789999998 667778899999999999999999999954
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-25 Score=246.43 Aligned_cols=199 Identities=29% Similarity=0.485 Sum_probs=171.9
Q ss_pred ecceecccCCceEEEEEe-CC----CCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 665 FENVIGGGGFRTAFKGTM-PD----QKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 665 ~~~~lG~G~~g~vy~a~~-~~----~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
-.++||+|+||.||+|.| ++ +-+||+|++.... .+....+..|+-+|.++.|||++++++++.... ..+|++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 346899999999999976 33 4468888886544 344578999999999999999999999997644 7799999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++.|+|.++.+.+...+-......|..||++++.||| .++++||||.++||+|..-..||+.|||+|+...+.....
T Consensus 779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred cccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 9999999999987777999999999999999999999 9999999999999999999999999999999887755554
Q ss_pred ccCCC-CCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCC
Q 047790 819 STDTA-DTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPEFE 867 (885)
Q Consensus 819 ~~~~~-~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~~~ 867 (885)
.+... -.+.|+|=|.+..+.++.++|||||||++||++| |..||.+..-
T Consensus 856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~ 906 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA 906 (1177)
T ss_pred cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH
Confidence 44332 2457999999999999999999999999999999 8899876533
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.7e-27 Score=224.60 Aligned_cols=198 Identities=28% Similarity=0.344 Sum_probs=165.5
Q ss_pred EEeecceecccCCceEEEEEe-CCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeC-----CeeE
Q 047790 662 IIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVG-----EEKL 733 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 733 (885)
+.+-.+.||.|+||+||-+++ ++|+.||+|++...-. ...+++.+|++++...+|.||....++.... .++|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 467789999999999999976 4699999999865332 2356788999999999999999998877543 2467
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+++|.+ ..+|..++-. .+.++.+.+..+.+||+.++.||| +.+|.||||||.|.+++.+..+||+|||+|+....
T Consensus 134 V~TELm-QSDLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 134 VLTELM-QSDLHKIIVS-PQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHH-Hhhhhheecc-CCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccch
Confidence 888888 4588777763 455889999999999999999999 99999999999999999999999999999987655
Q ss_pred CCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
++...-+...-|.+|.|||++.+. .|+.+.||||+||++.|++.++..|..
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 433333344568899999998875 689999999999999999999988864
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-25 Score=215.13 Aligned_cols=207 Identities=21% Similarity=0.356 Sum_probs=164.7
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeee-eEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGY-CSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~-~~~~~~~~lv~ 736 (885)
...|.|++.+|+|.||.+-.++++. +..+|+|.+++.... .++|.+|...---+. |.||+.-|++ |...+.++++|
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt-~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT-QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh-HHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 3458999999999999999998765 777899998765433 678888887655554 8999998885 66778889999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc--CCCcEEEeeccCcccccCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN--DYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~--~~~~vkl~Dfg~a~~~~~~ 814 (885)
||++.|+|.+-+.. .++.+.....++.|+++|+.||| ++.+||||||.+||++- +..+||++|||..+..+.-
T Consensus 102 E~aP~gdL~snv~~--~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t 176 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEA--AGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT 176 (378)
T ss_pred ccCccchhhhhcCc--ccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccCce
Confidence 99999999998765 34888899999999999999999 99999999999999994 4458999999998875532
Q ss_pred CCCcccCCCCCCccCCcccccCC-----CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHH
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAG-----RANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWV 878 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~DvwslGvvl~elltg~~P~~~~~~~~~~~~l~~~~ 878 (885)
.. ....+..|.|||..... ...+.+|+|.||+++|+++||+.||+.... .++..++|.
T Consensus 177 V~----~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~--~d~~Y~~~~ 239 (378)
T KOG1345|consen 177 VK----YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASI--MDKPYWEWE 239 (378)
T ss_pred eh----hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhc--cCchHHHHH
Confidence 11 12345568888864432 346789999999999999999999984333 233455554
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.3e-24 Score=239.62 Aligned_cols=202 Identities=21% Similarity=0.286 Sum_probs=150.5
Q ss_pred eeeEEeecceecccCCceEEEEEe-----------------CCCCeEEEEEecccccccH--------------HHHHHH
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-----------------PDQKTVAVKKLSQATGQCD--------------REFAAE 707 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-----------------~~~~~valK~~~~~~~~~~--------------~~~~~E 707 (885)
....|++.++||+|+||.||+|.. .+++.||+|++........ +....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 345799999999999999999863 2356799999864322111 223446
Q ss_pred HHHhcccCCCC-----ccceeeeeEe--------CCeeEEEEecccCCCHHHHHhhcC----------------------
Q 047790 708 METLDMVKHQN-----LVQLLGYCSV--------GEEKLLVYEYMVNGSLDDWLRNRA---------------------- 752 (885)
Q Consensus 708 ~~~l~~l~~~~-----i~~~~~~~~~--------~~~~~lv~e~~~~~sL~~~l~~~~---------------------- 752 (885)
+.++.+++|.+ ++++++++.. ++..++||||+++++|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 66677776554 3566666642 356799999999999999886421
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCc
Q 047790 753 -ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPS 831 (885)
Q Consensus 753 -~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aP 831 (885)
...++..+..++.|+++++.|+| +.+|+||||||+||+++.++.+|++|||++..+.............++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12356778899999999999999 89999999999999999999999999999876543222222223357899999
Q ss_pred ccccCCCC----------------------CCcchhHHHHHHHHHHHhCCC-CCC
Q 047790 832 EYGQAGRA----------------------NERGDIYSFGVILLELVTGKQ-PTG 863 (885)
Q Consensus 832 E~~~~~~~----------------------~~~~DvwslGvvl~elltg~~-P~~ 863 (885)
|.+..... ..+.|+||+||++|+|++|.. ||.
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 98754321 124699999999999999986 664
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-25 Score=233.43 Aligned_cols=204 Identities=23% Similarity=0.195 Sum_probs=172.4
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccC------CCCccceeeeeEe
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVK------HQNLVQLLGYCSV 728 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~------~~~i~~~~~~~~~ 728 (885)
+.+.-.+|.+....|+|-|+.|.+|.+.. |..||||++....... +.-..|++||++|+ .-|+++++..|.+
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~-KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMH-KTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHh-hhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 35566789999999999999999998654 7799999998765442 33457999999997 2489999999999
Q ss_pred CCeeEEEEecccCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC-CcEEEeec
Q 047790 729 GEEKLLVYEYMVNGSLDDWLRNR--AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY-FEAKVSDF 805 (885)
Q Consensus 729 ~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~-~~vkl~Df 805 (885)
.++.|||||.+ .-+|.+++.+. ..++...++..++.|+.-||..|. .+||+|.||||+||+|.+. ..+|||||
T Consensus 506 knHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDf 581 (752)
T KOG0670|consen 506 KNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDF 581 (752)
T ss_pred cceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccC
Confidence 99999999988 55999999863 344788899999999999999999 9999999999999999854 56799999
Q ss_pred cCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 806 GLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 806 g~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
|.|...+.. .-+++.....|.|||++.|-.|+...|+||+||++||++||+..|-+...
T Consensus 582 GSA~~~~en---eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN 640 (752)
T KOG0670|consen 582 GSASFASEN---EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN 640 (752)
T ss_pred ccccccccc---cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence 999776542 22334456789999999999999999999999999999999999876543
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=262.02 Aligned_cols=179 Identities=21% Similarity=0.285 Sum_probs=95.9
Q ss_pred CccCcCCCCEEeccCCc------CCCCCCccccccc-cccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcc
Q 047790 107 QVSNLKRLKMLSVGENQ------LSGSIPSQLGLLT-RLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR 179 (885)
Q Consensus 107 ~~~~l~~L~~L~L~~n~------l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 179 (885)
.|.++++|+.|.+..+. +...+|..|..++ +|+.|++.++.++ .+|..| ...+|+.|++++|++. .+|..
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~ 629 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDG 629 (1153)
T ss_pred HHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccc
Confidence 45566666666665443 2223555555543 4666666666665 555555 3466666666666665 45555
Q ss_pred cCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCcccc
Q 047790 180 LGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIG 259 (885)
Q Consensus 180 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~ 259 (885)
+..+++|+.|+|++|...+.+|. +..+++|++|++++|.....+|..+.++++|+.|+++.|.. .+.+|..+
T Consensus 630 ~~~l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~-----L~~Lp~~i- 701 (1153)
T PLN03210 630 VHSLTGLRNIDLRGSKNLKEIPD--LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCEN-----LEILPTGI- 701 (1153)
T ss_pred cccCCCCCEEECCCCCCcCcCCc--cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCC-----cCccCCcC-
Confidence 66666666666666543335553 55566666666666655445555555555555555543221 22333333
Q ss_pred CCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCc
Q 047790 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLS 299 (885)
Q Consensus 260 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 299 (885)
++++|+.|++++|...+.+|.. ..+|+.|++++|.++
T Consensus 702 ~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~ 738 (1153)
T PLN03210 702 NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE 738 (1153)
T ss_pred CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc
Confidence 4455555555555433333321 234444444444444
|
syringae 6; Provisional |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-23 Score=258.90 Aligned_cols=200 Identities=22% Similarity=0.278 Sum_probs=161.2
Q ss_pred ccccCCCCCCEEecCCCc------ccCcCCcCccCcC-CCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCc
Q 047790 82 PFLFNLSSLRILDLSKNL------LFGQLSPQVSNLK-RLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPS 154 (885)
Q Consensus 82 ~~l~~l~~L~~L~Ls~n~------l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 154 (885)
.++..+++|+.|.+..+. +...+|..|..++ +|+.|++.++.+. .+|..| ...+|++|++++|++. .+|.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 357889999999997653 3345778887774 6999999999997 788888 5799999999999998 6788
Q ss_pred cccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCc
Q 047790 155 ELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKK 234 (885)
Q Consensus 155 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 234 (885)
.+..+++|+.|+|++|.....+|. +..+++|++|+|++|.....+|.. +..+++|++|++++|...+.+|..+ ++++
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~s-i~~L~~L~~L~L~~c~~L~~Lp~~i-~l~s 705 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSS-IQYLNKLEDLDMSRCENLEILPTGI-NLKS 705 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchh-hhccCCCCEEeCCCCCCcCccCCcC-CCCC
Confidence 889999999999999875557775 889999999999998766689877 8899999999999976666788766 7999
Q ss_pred ccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCC
Q 047790 235 LSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNM 297 (885)
Q Consensus 235 L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 297 (885)
|+.|++++|.. .+.+|.. .++|++|++++|.++ .+|..+ .+++|++|++.++.
T Consensus 706 L~~L~Lsgc~~-----L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~ 758 (1153)
T PLN03210 706 LYRLNLSGCSR-----LKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMK 758 (1153)
T ss_pred CCEEeCCCCCC-----ccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccc
Confidence 99999976542 2334432 467999999999997 567654 46677777776543
|
syringae 6; Provisional |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.3e-24 Score=243.61 Aligned_cols=198 Identities=19% Similarity=0.220 Sum_probs=141.8
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-----CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeee------eE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-----QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGY------CS 727 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-----~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~------~~ 727 (885)
....|++.++||+|+||.||+|++.+ +..||+|++...... +....| + ++...+..+..++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e-~-l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE-R-VRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH-H-HHhhchhhHHHHHHhhhcccccc
Confidence 34579999999999999999998754 688999987643211 111111 1 111122222222221 13
Q ss_pred eCCeeEEEEecccCCCHHHHHhhcCCC-------------------CCHHHHHHHHHHHHHHHHHHhccCCCCceecCCC
Q 047790 728 VGEEKLLVYEYMVNGSLDDWLRNRAAS-------------------LDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIK 788 (885)
Q Consensus 728 ~~~~~~lv~e~~~~~sL~~~l~~~~~~-------------------~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlk 788 (885)
.+...++||||+.+++|.+++...... .....+..++.|++.+++|+| +.+|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 456789999999999999988753211 123346689999999999999 8999999999
Q ss_pred CCcEEEcC-CCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCC----------------------CCCCcchh
Q 047790 789 TSNILLND-YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG----------------------RANERGDI 845 (885)
Q Consensus 789 p~Nil~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----------------------~~~~~~Dv 845 (885)
|+||+++. .+.+||+|||+|..+............+++.|+|||.+... .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999985 57899999999986654333344456788999999964322 23345699
Q ss_pred HHHHHHHHHHHhCCCCCC
Q 047790 846 YSFGVILLELVTGKQPTG 863 (885)
Q Consensus 846 wslGvvl~elltg~~P~~ 863 (885)
||+||++|||+++..|+.
T Consensus 363 wSlGviL~el~~~~~~~~ 380 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSD 380 (566)
T ss_pred HHHHHHHHHHHhCcCCCc
Confidence 999999999999877654
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-23 Score=216.49 Aligned_cols=186 Identities=31% Similarity=0.395 Sum_probs=164.6
Q ss_pred CCceEEEEEeCC-CCeEEEEEeccccccc-HHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCHHHHHhh
Q 047790 673 GFRTAFKGTMPD-QKTVAVKKLSQATGQC-DREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRN 750 (885)
Q Consensus 673 ~~g~vy~a~~~~-~~~valK~~~~~~~~~-~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~ 750 (885)
+||.||+|.+.+ ++.+|+|++....... .+.+.+|++.+++++|++++++++++..+...+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999998865 8899999997655443 67899999999999999999999999988999999999999999999875
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCC
Q 047790 751 RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP 830 (885)
Q Consensus 751 ~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~a 830 (885)
... ++...+..++.+++.++++|| +.+++|+|++|.||++++++.++++|||.+....... ......++..|+|
T Consensus 81 ~~~-~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~ 154 (244)
T smart00220 81 RGR-LSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMA 154 (244)
T ss_pred ccC-CCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCC
Confidence 443 889999999999999999999 8999999999999999999999999999988765432 2234457888999
Q ss_pred cccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 831 SEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 831 PE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
||...+..++.++|+|++|+++|++++|..||..
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~ 188 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPG 188 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999988889999999999999999999999865
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=207.90 Aligned_cols=205 Identities=20% Similarity=0.291 Sum_probs=179.4
Q ss_pred eceeeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCee
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~ 732 (885)
++.+|+-.|.++++||+|.||+++.|+. -++++||||.-.. .....++..|.++.+.|. .+.|..+|-|...+.+-
T Consensus 22 ~~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~N 99 (449)
T KOG1165|consen 22 GVLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYN 99 (449)
T ss_pred CceEecccceeccccccCcceeeecccccccCceEEEEeccc--cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchh
Confidence 3455667899999999999999999974 5789999997433 345678889999999887 69999999999888899
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-----CCcEEEeeccC
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-----YFEAKVSDFGL 807 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-----~~~vkl~Dfg~ 807 (885)
.||+|.+ |.||+++.+-.+..++..++..+|.|+..-++++| .+..|+|||||+|+++.. ...+.++|||+
T Consensus 100 iLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGm 175 (449)
T KOG1165|consen 100 ILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGM 175 (449)
T ss_pred hhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccc
Confidence 9999998 88999999988888999999999999999999999 999999999999999963 34589999999
Q ss_pred cccccCCCCCccc------CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVST------DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
|+.+.+++.+... ...||..||+--...++..+++.|+-|+|-++++.+.|..||.+-
T Consensus 176 AK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 176 AKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred hhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 9999876544332 235899999999999999999999999999999999999999863
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-23 Score=240.20 Aligned_cols=263 Identities=23% Similarity=0.266 Sum_probs=196.8
Q ss_pred CCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEee
Q 047790 262 SMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQ 341 (885)
Q Consensus 262 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls 341 (885)
..-..|++++|.++ .+|..+. .+|+.|++.+|+++.++. .+++|++|++++|+|+. +|... ..|+.|+++
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~LP~----lp~~Lk~LdLs~N~Lts-LP~lp--~sL~~L~Ls 270 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTS-LPVLP--PGLLELSIF 270 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCCCCC----CCCCCcEEEecCCccCc-ccCcc--cccceeecc
Confidence 34668899999998 6777664 478999999999987543 35789999999999985 45432 268889999
Q ss_pred cCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcC
Q 047790 342 YNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGII 421 (885)
Q Consensus 342 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 421 (885)
+|.++.. |.. ..+|+.|++++|+++.. |. .+++|+.|+|++|++++ +|.. ..+|+.|++++|+|++ +
T Consensus 271 ~N~L~~L-p~l---p~~L~~L~Ls~N~Lt~L-P~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 271 SNPLTHL-PAL---PSGLCKLWIFGNQLTSL-PV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-L 337 (788)
T ss_pred CCchhhh-hhc---hhhcCEEECcCCccccc-cc---cccccceeECCCCcccc-CCCC---cccccccccccCcccc-c
Confidence 9998854 332 25688889999988854 32 24679999999999986 4443 2467888999999985 5
Q ss_pred CCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeec
Q 047790 422 PMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLG 501 (885)
Q Consensus 422 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 501 (885)
|.. ..+|++|+|++|+|+ .+|.. ..+|+.|++++|+|+ .+|... .+|+.|+++
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls-----------------~LP~l---p~~L~~L~Ls~N~L~-~LP~l~---~~L~~LdLs 390 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLA-----------------SLPTL---PSELYKLWAYNNRLT-SLPALP---SGLKELIVS 390 (788)
T ss_pred ccc---ccccceEecCCCccC-----------------CCCCC---Ccccceehhhccccc-cCcccc---cccceEEec
Confidence 542 247889999998886 34432 246788899999998 467543 468899999
Q ss_pred cccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccccccccccccc
Q 047790 502 HNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNM 581 (885)
Q Consensus 502 ~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~ 581 (885)
+|+|++ + |.. .++|+.|++++|+|+ .+|.. ..+|+.|++++|+
T Consensus 391 ~N~Lt~-L----------------P~l---~s~L~~LdLS~N~Ls--------------sIP~l---~~~L~~L~Ls~Nq 433 (788)
T PRK15387 391 GNRLTS-L----------------PVL---PSELKELMVSGNRLT--------------SLPML---PSGLLSLSVYRNQ 433 (788)
T ss_pred CCcccC-C----------------CCc---ccCCCEEEccCCcCC--------------CCCcc---hhhhhhhhhccCc
Confidence 999883 3 322 257889999977776 35543 2467889999999
Q ss_pred CCCCCCccccCccccceeecccCcCCCCCCC
Q 047790 582 LDGHIPEKLCSLPYLLYLNLADNRLEGEVPR 612 (885)
Q Consensus 582 l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~ 612 (885)
|+ .+|..++++++|+.|+|++|+|++.+|.
T Consensus 434 Lt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 434 LT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred cc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 98 7999999999999999999999987664
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-23 Score=241.25 Aligned_cols=198 Identities=27% Similarity=0.432 Sum_probs=167.5
Q ss_pred eecceecccCCceEEEEEeC----C----CCeEEEEEecccccc-cHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeE
Q 047790 664 VFENVIGGGGFRTAFKGTMP----D----QKTVAVKKLSQATGQ-CDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 664 ~~~~~lG~G~~g~vy~a~~~----~----~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~ 733 (885)
.+.+.+|+|+||.||+|... . ...||+|..+..... +.+.+..|+++++.+. ||||+.+.+++..++..+
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~ 378 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY 378 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE
Confidence 56679999999999999632 1 456899998765433 4567999999999885 999999999999888999
Q ss_pred EEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC
Q 047790 734 LVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~ 798 (885)
+|+||+..|+|.++++... ..+...+...++.||+.+++||+ +..++|||+.++||+++++.
T Consensus 379 ~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi~~~~ 455 (609)
T KOG0200|consen 379 VIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLITKNK 455 (609)
T ss_pred EEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEecCCC
Confidence 9999999999999998755 34888899999999999999999 99999999999999999999
Q ss_pred cEEEeeccCcccccCCCCCcccCCC--CCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 799 EAKVSDFGLARLISDCESHVSTDTA--DTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 799 ~vkl~Dfg~a~~~~~~~~~~~~~~~--~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.+||+|||+|+...+.+........ -...|||||.+....++.++|||||||++||+.| |..||.+
T Consensus 456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG 524 (609)
T ss_pred EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC
Confidence 9999999999875543322212122 3456999999999999999999999999999999 7778754
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-25 Score=228.32 Aligned_cols=275 Identities=20% Similarity=0.200 Sum_probs=177.7
Q ss_pred cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccC-CcCCCCCCccccccccccEeee
Q 047790 65 RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGE-NQLSGSIPSQLGLLTRLETISL 143 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L 143 (885)
..|+++|..|.++.--+.++..+++|+.||||+|+|+.+-|.+|.++.+|..|-+.+ |+|+......|++|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 568899999999854455799999999999999999999999999999998887777 9999766688999999999999
Q ss_pred eccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCC------------CCCcccccccccc
Q 047790 144 RSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSG------------SLPVSLLKNLQSL 211 (885)
Q Consensus 144 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~------------~~p~~~~~~l~~L 211 (885)
..|++.-...+.|..+++|..|.+-+|.+..+.-.+|..+..++.+.+..|.+-. ..|.+ +++....
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ie-tsgarc~ 226 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIE-TSGARCV 226 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhh-cccceec
Confidence 9999998888899999999999999999994444589999999999999998431 11222 3333333
Q ss_pred cEEEeecccCcccCCccccCCCcccceecccccccccccccccCc-cccCCCCCcEEEecCCcccccccccccCCCCCcE
Q 047790 212 SYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITP-EIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVE 290 (885)
Q Consensus 212 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~-~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 290 (885)
.-..+.++++...-+..|..- ++.+--.. .......+..|. .|..+++|+.|+|++|+|+++-+.+|.+...+++
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~c~--~esl~s~~--~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~e 302 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFLCS--LESLPSRL--SSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQE 302 (498)
T ss_pred chHHHHHHHhcccchhhhhhh--HHhHHHhh--ccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhh
Confidence 444444444432222222110 11110000 000000111221 2455555555555555555555555555555555
Q ss_pred EEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCc
Q 047790 291 INLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNN 344 (885)
Q Consensus 291 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~ 344 (885)
|.|..|+|..+....|.++..|+.|+|.+|+|+..-|..|... +|..|.|-.|.
T Consensus 303 L~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np 357 (498)
T KOG4237|consen 303 LYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNP 357 (498)
T ss_pred hhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCc
Confidence 5555555555555555555555555555555554444444443 34444444443
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=199.09 Aligned_cols=205 Identities=20% Similarity=0.267 Sum_probs=174.0
Q ss_pred eeeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCC-CCccceeeeeEeCCeeEE
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH-QNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~~~~~l 734 (885)
.++++.|.+.++||.|+||.+|.|.. .+|..||+|.-+... ...++..|.++.+.+++ ..|+.+..++.+..+-++
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl 88 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL 88 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence 34567899999999999999999974 569999999855433 23567789999999985 778888888888899999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc---CCCcEEEeeccCcccc
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN---DYFEAKVSDFGLARLI 811 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~---~~~~vkl~Dfg~a~~~ 811 (885)
||+.+ |.+|++...-....++..++.-+|.|++.-++|+| .++++||||||+|+++. ....+.++|||+|+++
T Consensus 89 VMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 89 VMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred eeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 99998 88999999887777999999999999999999999 99999999999999996 3346899999999998
Q ss_pred cCCCCCc------ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 812 SDCESHV------STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 812 ~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
.+..... .....||..|++--...+...+.+.|+-|+|+++.++-.|..||++-..
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 6533221 2234588999998887788889999999999999999999999987543
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-23 Score=239.95 Aligned_cols=77 Identities=26% Similarity=0.274 Sum_probs=51.6
Q ss_pred ccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcC
Q 047790 358 NLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLG 437 (885)
Q Consensus 358 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 437 (885)
+|+.|++++|+|++ +|.. .++|+.|++++|+++. +|.. ..+|+.|+|++|+|+ .+|..+.++++|+.|+|+
T Consensus 383 ~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 383 GLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred ccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 45555555555553 2221 2457778888888874 4543 246778888888887 577788888888888888
Q ss_pred CcccCc
Q 047790 438 SNNLNG 443 (885)
Q Consensus 438 ~N~l~~ 443 (885)
+|+|++
T Consensus 454 ~N~Ls~ 459 (788)
T PRK15387 454 GNPLSE 459 (788)
T ss_pred CCCCCc
Confidence 887753
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=237.63 Aligned_cols=356 Identities=21% Similarity=0.280 Sum_probs=202.7
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCCCCCCC----CCCCCCCcccCC----------------ccccCCcEEEEEEecccccc
Q 047790 19 TAIDEPKQERRSLVHFKNSLQNPQVLSG----WNKTTRHCHWFG----------------VKCRHSRVVSLVIQTQSLKG 78 (885)
Q Consensus 19 ~~~~~~~~~~~aLl~~k~~~~~~~~~~~----w~~~~~~c~w~g----------------v~c~~~~v~~l~l~~~~l~g 78 (885)
+.....++|.+.+++..+.+.-|+++.+ |..++|.|--.. |.|....|+.+..-+.....
T Consensus 56 ~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~~~ 135 (754)
T PRK15370 56 PPETASPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQAS 135 (754)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCchhhccccccCCCCcccccCCcchhhheeeecCCceEEecCCCcccccccccccccc
Confidence 4455678899999999999988887777 998899997655 56777777776654432111
Q ss_pred cccc----------------------------c-----ccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCC
Q 047790 79 PVSP----------------------------F-----LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLS 125 (885)
Q Consensus 79 ~~~~----------------------------~-----l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 125 (885)
.... . -+-..+.+.|+|+++.++ .+|..+. +.|+.|+|++|+|+
T Consensus 136 ~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt 212 (754)
T PRK15370 136 SASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK 212 (754)
T ss_pred cCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC
Confidence 1000 0 011133455666655554 2344332 34556666666655
Q ss_pred CCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccc
Q 047790 126 GSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205 (885)
Q Consensus 126 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 205 (885)
.+|..+. ++|++|++++|+++ .+|..+. .+|+.|+|++|++. .+|..+. ++|+.|++++|+++ .+|..+.
T Consensus 213 -sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~ 282 (754)
T PRK15370 213 -SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP 282 (754)
T ss_pred -cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC
Confidence 3444332 35566666666555 3444332 24555666666555 4444432 35555566655555 4554421
Q ss_pred cccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCC
Q 047790 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNS 285 (885)
Q Consensus 206 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 285 (885)
++|++|++++|++++ +|.. +. ++|+.|++++|+++. +|..+ .
T Consensus 283 ---~sL~~L~Ls~N~Lt~-LP~~-----------------------------lp--~sL~~L~Ls~N~Lt~-LP~~l--~ 324 (754)
T PRK15370 283 ---EELRYLSVYDNSIRT-LPAH-----------------------------LP--SGITHLNVQSNSLTA-LPETL--P 324 (754)
T ss_pred ---CCCcEEECCCCcccc-Cccc-----------------------------ch--hhHHHHHhcCCcccc-CCccc--c
Confidence 345555555555542 2222 11 246666677777663 44433 2
Q ss_pred CCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeecc
Q 047790 286 GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAA 365 (885)
Q Consensus 286 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 365 (885)
++|+.|++++|.+++++. .+ .++|+.|++++|+|+. +|..+. ..|+.|++++|+++.. |..+. ..|+.|+++
T Consensus 325 ~sL~~L~Ls~N~Lt~LP~-~l--~~sL~~L~Ls~N~L~~-LP~~lp-~~L~~LdLs~N~Lt~L-P~~l~--~sL~~LdLs 396 (754)
T PRK15370 325 PGLKTLEAGENALTSLPA-SL--PPELQVLDVSKNQITV-LPETLP-PTITTLDVSRNALTNL-PENLP--AALQIMQAS 396 (754)
T ss_pred ccceeccccCCccccCCh-hh--cCcccEEECCCCCCCc-CChhhc-CCcCEEECCCCcCCCC-CHhHH--HHHHHHhhc
Confidence 467777777777765432 22 2567777777777763 444332 2577777777777743 44333 357777888
Q ss_pred cccccCCCcc----cccccccccEEEccCCcccccCcccccccccccceecccccccC-cCCCccCCCCcccEEEcCCcc
Q 047790 366 SNLLEGSLSW----EISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDG-IIPMEFGDCISLNTLDLGSNN 440 (885)
Q Consensus 366 ~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~ 440 (885)
+|++.. +|. .+...+.+..|++.+|+++. ..+.+|+.| ++.+.+.| .++...+....++....-.+.
T Consensus 397 ~N~L~~-LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~gp~i~~~~~~~~~l~~~~~l~~a 468 (754)
T PRK15370 397 RNNLVR-LPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQGPRVLFAMGDFSIVRVTRPLHQA 468 (754)
T ss_pred cCCccc-CchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccCCcccccccccccccccchHHHH
Confidence 887763 333 33445778899999999862 345666666 45565554 334444555555544433444
Q ss_pred c
Q 047790 441 L 441 (885)
Q Consensus 441 l 441 (885)
+
T Consensus 469 ~ 469 (754)
T PRK15370 469 V 469 (754)
T ss_pred H
Confidence 3
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8e-24 Score=234.20 Aligned_cols=196 Identities=24% Similarity=0.365 Sum_probs=161.6
Q ss_pred EeecceecccCCc-eEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEEeccc
Q 047790 663 IVFENVIGGGGFR-TAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 663 ~~~~~~lG~G~~g-~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
|.-.+.+|.|+.| .||+|.. ++++||||++-.+. .....+|++.++.-. ||||+++|....+++..|+..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 4457889999997 5899987 56799999986543 456778999998764 999999999999999999999999
Q ss_pred CCCHHHHHhhc--CCCC-CHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-----CCcEEEeeccCccccc
Q 047790 741 NGSLDDWLRNR--AASL-DWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-----YFEAKVSDFGLARLIS 812 (885)
Q Consensus 741 ~~sL~~~l~~~--~~~~-~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-----~~~vkl~Dfg~a~~~~ 812 (885)
..+|.++++.. +... .....+.+..|+++|+++|| +.+|||||+||+||+++. ...++|+|||+++++.
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 55999999863 1111 11345678899999999999 999999999999999974 2568999999999987
Q ss_pred CCCCCc--ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhC-CCCCCCCC
Q 047790 813 DCESHV--STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTG-KQPTGPEF 866 (885)
Q Consensus 813 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg-~~P~~~~~ 866 (885)
...... .....||-+|+|||++.....+.++|+||+||++|+.++| ..||....
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~ 719 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL 719 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH
Confidence 644332 2345689999999999999888899999999999999997 89998543
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-23 Score=206.85 Aligned_cols=198 Identities=30% Similarity=0.309 Sum_probs=167.1
Q ss_pred eeeeeEEeecceecccCCceEEEEE-eCCCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCC---
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE--- 730 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~-~~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--- 730 (885)
..+-.+|.-.+.+|.|+- .|-.|. .-.+++||+|+....- ....++..+|...+..++|+||+.++.+|..+.
T Consensus 13 ftv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~ 91 (369)
T KOG0665|consen 13 FTVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLE 91 (369)
T ss_pred eeeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHH
Confidence 445678888899999988 444443 3458899999886542 345678889999999999999999999996543
Q ss_pred ---eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 731 ---EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 731 ---~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
..|+|||++ ..++..++.. .++=.++..+..|++.|++++| +.||+|||+||+||++..++.+|+.|||+
T Consensus 92 ~~~e~y~v~e~m-~~nl~~vi~~---elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 92 EFQEVYLVMELM-DANLCQVILM---ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred HHHhHHHHHHhh-hhHHHHHHHH---hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchh
Confidence 569999999 6699998872 2666789999999999999999 99999999999999999999999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
|...... ..-.....+..|.|||++.+-.+.+..||||+||++.||++|+..|.+
T Consensus 165 ar~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g 219 (369)
T KOG0665|consen 165 ARTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG 219 (369)
T ss_pred hcccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC
Confidence 9875542 334456789999999999999999999999999999999999999863
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-23 Score=214.27 Aligned_cols=209 Identities=26% Similarity=0.340 Sum_probs=171.9
Q ss_pred eEEeecceecccCCceEEEEEeC----CCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 735 (885)
..|.++++||+|.|+.||+|... ..+.||+|.+.... ...++.+|++++..+. +.||+++.+.+...+..++|
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~iv 113 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIV 113 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEE
Confidence 45888999999999999999643 46779999986543 4578999999999987 78999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-CCCcEEEeeccCcccccC-
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARLISD- 813 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-~~~~vkl~Dfg~a~~~~~- 813 (885)
+||++.....++... ++...+..+.+.++.|++++| ..||+||||||.|++++ ..+.-.|+|||+|..+..
T Consensus 114 lp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~ 186 (418)
T KOG1167|consen 114 LPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGY 186 (418)
T ss_pred ecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHHHHHhh
Confidence 999999999998864 678899999999999999999 99999999999999998 456679999999862200
Q ss_pred ------------------------------------------CCCCcccCCCCCCccCCcccccCCC-CCCcchhHHHHH
Q 047790 814 ------------------------------------------CESHVSTDTADTIGYVPSEYGQAGR-ANERGDIYSFGV 850 (885)
Q Consensus 814 ------------------------------------------~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv 850 (885)
..........||++|.|||++...+ .++++||||.||
T Consensus 187 ~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GV 266 (418)
T KOG1167|consen 187 QQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGV 266 (418)
T ss_pred hhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccc
Confidence 0011123345899999999988865 689999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCHHHHHHH
Q 047790 851 ILLELVTGKQPTGPEFEDKDGGNLVDWVLL 880 (885)
Q Consensus 851 vl~elltg~~P~~~~~~~~~~~~l~~~~~~ 880 (885)
++..++++++||-...++. ..+++.+..
T Consensus 267 I~Lslls~~~PFf~a~dd~--~al~ei~ti 294 (418)
T KOG1167|consen 267 ILLSLLSRRYPFFKAKDDA--DALAEIATI 294 (418)
T ss_pred eeehhhccccccccCcccc--chHHHHHHH
Confidence 9999999999997544433 355555543
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-21 Score=196.96 Aligned_cols=183 Identities=33% Similarity=0.502 Sum_probs=159.2
Q ss_pred ecccCCceEEEEEeCC-CCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCHHH
Q 047790 669 IGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDD 746 (885)
Q Consensus 669 lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~ 746 (885)
||+|.+|.||++...+ ++.+++|++...... ....+.+|++.++.++|++++++++++......+++|||+.+++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999998765 889999998765432 34678999999999999999999999998899999999999899999
Q ss_pred HHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-CCcEEEeeccCcccccCCCCCcccCCCCC
Q 047790 747 WLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-YFEAKVSDFGLARLISDCESHVSTDTADT 825 (885)
Q Consensus 747 ~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~ 825 (885)
++......++...+..++.+++.+++++| +.+++|+|++|.||+++. .+.++++|||.+........ ......+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~ 156 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVGT 156 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccCC
Confidence 99865345899999999999999999999 899999999999999998 89999999999877654221 12334577
Q ss_pred CccCCcccccCC-CCCCcchhHHHHHHHHHH
Q 047790 826 IGYVPSEYGQAG-RANERGDIYSFGVILLEL 855 (885)
Q Consensus 826 ~~y~aPE~~~~~-~~~~~~DvwslGvvl~el 855 (885)
..|++||..... .++.+.|+|++|++++++
T Consensus 157 ~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 157 PAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred CCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 889999998887 788999999999999998
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=212.33 Aligned_cols=201 Identities=22% Similarity=0.250 Sum_probs=167.9
Q ss_pred EEeecceecccCCceEEEEEeCCC--CeEEEEEecccccccHHHHHHHHHHhcccC----CCCccceeeee-EeCCeeEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQ--KTVAVKKLSQATGQCDREFAAEMETLDMVK----HQNLVQLLGYC-SVGEEKLL 734 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~--~~valK~~~~~~~~~~~~~~~E~~~l~~l~----~~~i~~~~~~~-~~~~~~~l 734 (885)
.|.+.++||+|+||.||.|..... +.+|+|.-..........+..|+.++..+. .+++..+++.+ ..+.+.|+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999987653 478888876654332337888899988887 36899999998 47788999
Q ss_pred EEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC-----CcEEEeeccCc
Q 047790 735 VYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY-----FEAKVSDFGLA 808 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~-----~~vkl~Dfg~a 808 (885)
||+.+ |.+|.++..... +.++..++..++.|++.+++++| +.|++||||||+|+++... ..+.+.|||+|
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99988 889999886544 67999999999999999999999 9999999999999999854 46999999999
Q ss_pred c--cccCCCC-------CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 809 R--LISDCES-------HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 809 ~--~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
+ .+..... .......||..|+++.+..+...+++.|+||+++++.|+..|..||....
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~ 241 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE 241 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence 8 4322211 11223459999999999999999999999999999999999999996543
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-23 Score=224.22 Aligned_cols=197 Identities=24% Similarity=0.324 Sum_probs=173.0
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.+|+...++|.|.+|.||+|++. .++..|+|.++-+...+...+.+|+-+++..+||||+.+++.+..++..++.||||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 46888999999999999999865 58889999999887777788889999999999999999999999899999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
.||+|.+..+.. +.+++.++..+++..+++++|+| ++|-+|||||-.||++++.|.||++|||-+..+... ....
T Consensus 95 gggslQdiy~~T-gplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqitat-i~Kr 169 (829)
T KOG0576|consen 95 GGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT-IAKR 169 (829)
T ss_pred CCCcccceeeec-ccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhhh-hhhh
Confidence 999999988744 45899999999999999999999 999999999999999999999999999988776542 2233
Q ss_pred cCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCC
Q 047790 820 TDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~ 862 (885)
..+.||++|||||+.. ...|...+|+|+.|+...|+-.-..|-
T Consensus 170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqppl 215 (829)
T KOG0576|consen 170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPL 215 (829)
T ss_pred hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcc
Confidence 4568999999999644 457889999999999999987766663
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-21 Score=227.08 Aligned_cols=202 Identities=24% Similarity=0.370 Sum_probs=118.5
Q ss_pred CCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeec
Q 047790 263 MLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQY 342 (885)
Q Consensus 263 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~ 342 (885)
+...|++++++++ .+|..+ ..+|+.|+|++|+|+.++...+ ++|++|++++|+++. +|..+.. .|+.|+|++
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~I--p~~L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~Lts-LP~~l~~-~L~~L~Ls~ 250 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACI--PEQITTLILDNNELKSLPENLQ---GNIKTLYANSNQLTS-IPATLPD-TIQEMELSI 250 (754)
T ss_pred CceEEEeCCCCcC-cCCccc--ccCCcEEEecCCCCCcCChhhc---cCCCEEECCCCcccc-CChhhhc-cccEEECcC
Confidence 4678888888888 566655 3578888888888886655433 478888888888874 4443322 577788888
Q ss_pred CccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCC
Q 047790 343 NNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIP 422 (885)
Q Consensus 343 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 422 (885)
|+++ .+|..+. .+|+.|++++|++.. +|..+. .+|+.|++++|+++. +|..+. ++|+.|++++|+++. +|
T Consensus 251 N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP 320 (754)
T PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LP 320 (754)
T ss_pred CccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CC
Confidence 8777 4454443 356666666666663 343332 356666666666653 333322 356666666666653 33
Q ss_pred CccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeecc
Q 047790 423 MEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGH 502 (885)
Q Consensus 423 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 502 (885)
..+. ++|+.|++++|.++ .+|..+. ++|+.|++++|+|+ .+|..+. ++|+.|++++
T Consensus 321 ~~l~--~sL~~L~Ls~N~Lt-----------------~LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~ 376 (754)
T PRK15370 321 ETLP--PGLKTLEAGENALT-----------------SLPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSR 376 (754)
T ss_pred cccc--ccceeccccCCccc-----------------cCChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCC
Confidence 3222 35555555555554 2333332 45556666666555 3444332 3455555555
Q ss_pred ccce
Q 047790 503 NQLT 506 (885)
Q Consensus 503 N~l~ 506 (885)
|+|+
T Consensus 377 N~Lt 380 (754)
T PRK15370 377 NALT 380 (754)
T ss_pred CcCC
Confidence 5555
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-21 Score=198.95 Aligned_cols=204 Identities=24% Similarity=0.324 Sum_probs=166.5
Q ss_pred eEEeecceecccCCceEEEEEeCC------CCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEe-CCee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSV-GEEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~ 732 (885)
.+++...++-+|.||.||+|.|++ .+.|.+|.+++...+ ....+..|.-.+..+.|||+..+.++..+ ....
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P 363 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATP 363 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcc
Confidence 346667788999999999996543 455667777654433 34568889999999999999999998754 4567
Q ss_pred EEEEecccCCCHHHHHhh-------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeec
Q 047790 733 LLVYEYMVNGSLDDWLRN-------RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDF 805 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~-------~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Df 805 (885)
++.++++.-|+|..++.- ..+.+...+...++.|++.|++|+| +.||+|.||.++|-++++.-.||++|=
T Consensus 364 ~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVkltDs 440 (563)
T KOG1024|consen 364 FVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVKLTDS 440 (563)
T ss_pred eEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhheeEEeccc
Confidence 888999989999999982 3345788889999999999999999 999999999999999999999999998
Q ss_pred cCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCC
Q 047790 806 GLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPEFE 867 (885)
Q Consensus 806 g~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~~~ 867 (885)
.+++..-+.+.+ ......+...||+||.+....|+.++|||||||++|||+| |+.||...++
T Consensus 441 aLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP 504 (563)
T KOG1024|consen 441 ALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP 504 (563)
T ss_pred hhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH
Confidence 887765443322 2334456778999999999999999999999999999998 8899875443
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.3e-21 Score=204.19 Aligned_cols=163 Identities=22% Similarity=0.147 Sum_probs=126.0
Q ss_pred eeEEeecceecccCCceEEEEEeC--CCCeEEEEEecccc-----cccHHHHHHHHHHhcccCCCCccc-eeeeeEeCCe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP--DQKTVAVKKLSQAT-----GQCDREFAAEMETLDMVKHQNLVQ-LLGYCSVGEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~--~~~~valK~~~~~~-----~~~~~~~~~E~~~l~~l~~~~i~~-~~~~~~~~~~ 731 (885)
...|.+.++||+|+||.||+|.+. +++.+|+|++.... ......+.+|++++++++|+++++ ++++ +.
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~ 92 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GK 92 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CC
Confidence 356999999999999999999765 46778999865331 112456899999999999999885 4432 45
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCC-CCCcEEEcCCCcEEEeeccCccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDI-KTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dl-kp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.|+||||++|++|... .. .. ...++.+++++++|+| +.||+|||| ||+||+++.++.++|+|||+|+.
T Consensus 93 ~~LVmE~~~G~~L~~~-~~----~~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~ 161 (365)
T PRK09188 93 DGLVRGWTEGVPLHLA-RP----HG---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASV 161 (365)
T ss_pred cEEEEEccCCCCHHHh-Cc----cc---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence 7999999999999632 11 11 1467889999999999 999999999 99999999889999999999987
Q ss_pred ccCCCCCcc-------cCCCCCCccCCcccccCC
Q 047790 811 ISDCESHVS-------TDTADTIGYVPSEYGQAG 837 (885)
Q Consensus 811 ~~~~~~~~~-------~~~~~~~~y~aPE~~~~~ 837 (885)
+........ ....+++.|+|||.+...
T Consensus 162 ~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 162 FRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 754321111 233467889999987764
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.5e-22 Score=178.91 Aligned_cols=180 Identities=28% Similarity=0.417 Sum_probs=124.7
Q ss_pred ccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCcccc
Q 047790 403 NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT 482 (885)
Q Consensus 403 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 482 (885)
.+...+.|.||+|+++ .+|..+..+.+|+.|++++|+++ .+|..++.++.|+.|++.-|++.
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-----------------~lp~~issl~klr~lnvgmnrl~ 92 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-----------------ELPTSISSLPKLRILNVGMNRLN 92 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-----------------hcChhhhhchhhhheecchhhhh
Confidence 3455566666666666 45556666666777766666665 56666777777777777777776
Q ss_pred CCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeeccccccccc
Q 047790 483 GSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEI 562 (885)
Q Consensus 483 ~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~i 562 (885)
..|..|+.++.|+.|||++|++.. ..+|..|..++.|+-|+|++|.++ .+
T Consensus 93 -~lprgfgs~p~levldltynnl~e---------------~~lpgnff~m~tlralyl~dndfe--------------~l 142 (264)
T KOG0617|consen 93 -ILPRGFGSFPALEVLDLTYNNLNE---------------NSLPGNFFYMTTLRALYLGDNDFE--------------IL 142 (264)
T ss_pred -cCccccCCCchhhhhhcccccccc---------------ccCCcchhHHHHHHHHHhcCCCcc--------------cC
Confidence 667777777777777777777662 134667777777777777766555 66
Q ss_pred chhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccccc---cccccccCCcccc
Q 047790 563 PPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQN---LSIISLTGNKDLC 631 (885)
Q Consensus 563 p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~---~~~~~~~~N~~~c 631 (885)
|+++++|++|+.|.+.+|.+- ..|.+++.++.|++|.+.+|+|+-.+|+.+.+.- -....+++|||.-
T Consensus 143 p~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~vlppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 143 PPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred ChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceeeecChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 777777777777777777776 6777777777777777777777777777665543 3456788999964
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.8e-20 Score=182.25 Aligned_cols=172 Identities=14% Similarity=0.133 Sum_probs=133.8
Q ss_pred eeeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHH---------HHHHHHHhcccCCCCccceeeeeEe
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDRE---------FAAEMETLDMVKHQNLVQLLGYCSV 728 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~---------~~~E~~~l~~l~~~~i~~~~~~~~~ 728 (885)
++-++|.+.+++|.|+||.||.+.. +++.+|+|.+.......... +.+|++.+.+++||+|..+.+++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 4467899999999999999999866 57789999997554333222 6889999999999999999998654
Q ss_pred C--------CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcE
Q 047790 729 G--------EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA 800 (885)
Q Consensus 729 ~--------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~v 800 (885)
. ...+++|||++|.+|.++.. .++ ....+++.+++.+| +.|++|||++|.||++++++ +
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-E
Confidence 3 35789999999999988742 232 24558999999999 99999999999999999888 9
Q ss_pred EEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHH
Q 047790 801 KVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELV 856 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ell 856 (885)
+++|||.......+. .. ..+...+.+..++|+|++||++....
T Consensus 174 ~liDfg~~~~~~e~~-a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRK-AK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchh-hH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999875542211 10 11334445667899999999887654
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.6e-19 Score=174.91 Aligned_cols=140 Identities=15% Similarity=0.114 Sum_probs=109.8
Q ss_pred ecceecccCCceEEEEEeCCCCeEEEEEecccccc--c------------------------HHHHHHHHHHhcccCCCC
Q 047790 665 FENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ--C------------------------DREFAAEMETLDMVKHQN 718 (885)
Q Consensus 665 ~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~~~~ 718 (885)
+...||+|++|.||+|...+|+.||+|+++..... . ......|+++++++.+++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 1 INGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 35789999999999999888999999999754211 1 012345999999998887
Q ss_pred ccceeeeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-hccCCCCceecCCCCCcEEEcCC
Q 047790 719 LVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-HHGFKPYIIHMDIKTSNILLNDY 797 (885)
Q Consensus 719 i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~L-H~~~~~~i~H~dlkp~Nil~~~~ 797 (885)
+.....+.. ...++||||++|+++...... ...++...+..++.|++.+++++ | +.||+|||+||+||++++
T Consensus 81 v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~~- 153 (190)
T cd05147 81 IPCPEPILL--KSHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYHD- 153 (190)
T ss_pred CCCCcEEEe--cCCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEEC-
Confidence 754443322 234899999988777654332 34588899999999999999999 7 889999999999999984
Q ss_pred CcEEEeeccCcccc
Q 047790 798 FEAKVSDFGLARLI 811 (885)
Q Consensus 798 ~~vkl~Dfg~a~~~ 811 (885)
+.++++|||.|...
T Consensus 154 ~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 GKLYIIDVSQSVEH 167 (190)
T ss_pred CcEEEEEccccccC
Confidence 78999999998754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.5e-19 Score=216.82 Aligned_cols=146 Identities=19% Similarity=0.242 Sum_probs=111.7
Q ss_pred cCC-CCccceeeee-------EeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceec
Q 047790 714 VKH-QNLVQLLGYC-------SVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHM 785 (885)
Q Consensus 714 l~~-~~i~~~~~~~-------~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~ 785 (885)
++| +||..+++++ .+....+.+|||+ +++|.+++......+++..+..++.|+++|++||| ++||+||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~gIvHr 104 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAH---SQGIVVH 104 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 345 5677777766 2234567788887 66999999865566899999999999999999999 9999999
Q ss_pred CCCCCcEEEcCCCc-------------------EEEeeccCcccccCCC--------C-------CcccCCCCCCccCCc
Q 047790 786 DIKTSNILLNDYFE-------------------AKVSDFGLARLISDCE--------S-------HVSTDTADTIGYVPS 831 (885)
Q Consensus 786 dlkp~Nil~~~~~~-------------------vkl~Dfg~a~~~~~~~--------~-------~~~~~~~~~~~y~aP 831 (885)
||||+||+++..+. +|++|||.++...... . .......+|+.|+||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999965444 4555555554321100 0 000113468889999
Q ss_pred ccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 832 EYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 832 E~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
|++.+..++.++|||||||++|||++|..|+.
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~ 216 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSRE 216 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchh
Confidence 99999999999999999999999999988865
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-17 Score=182.93 Aligned_cols=198 Identities=32% Similarity=0.440 Sum_probs=170.0
Q ss_pred EeecceecccCCceEEEEEeCCCCeEEEEEecccccc---cHHHHHHHHHHhcccCCC-CccceeeeeEeCCeeEEEEec
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQ-NLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~-~i~~~~~~~~~~~~~~lv~e~ 738 (885)
|.+.+.+|.|+|+.||++.+. +.+++|.+...... ....+.+|+.+++.+.|+ +++++++++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 678899999999999999877 78899998765433 367899999999999988 799999999777778999999
Q ss_pred ccCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-cEEEeeccCcccccCCC
Q 047790 739 MVNGSLDDWLRNRA--ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-EAKVSDFGLARLISDCE 815 (885)
Q Consensus 739 ~~~~sL~~~l~~~~--~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-~vkl~Dfg~a~~~~~~~ 815 (885)
+.++++.+++.... ..+.......+..|++.++.++| +.+++|||+||+||+++..+ .++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997777544 25899999999999999999999 99999999999999999888 79999999987654432
Q ss_pred CC-----cccCCCCCCccCCcccccC---CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SH-----VSTDTADTIGYVPSEYGQA---GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~-----~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ......++..|+|||...+ ..+....|+|++|++++++++|..||...
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~ 214 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGE 214 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 22 2355678999999999988 57889999999999999999999996544
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.5e-18 Score=165.52 Aligned_cols=185 Identities=16% Similarity=0.079 Sum_probs=137.8
Q ss_pred eecceecccCCceEEEEEeCCCCeEEEEEeccccccc----HHHHHHHHHHhcccCC-CCccceeeeeEeCCeeEEEEec
Q 047790 664 VFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQC----DREFAAEMETLDMVKH-QNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 664 ~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~----~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+...|++|+||.||.+.. ++.+++.+.+....... ...+.+|+++++++.| ++|++++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3567899999999998876 66777777776544321 1257899999999964 789999886 446899999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCC-CCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDI-KTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dl-kp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
++|.+|...... ....+..|+..+++++| +.||+|||| ||+||+++.++.++|+|||.|.........
T Consensus 80 I~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 80 LAGAAMYQRPPR--------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred ecCccHHhhhhh--------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 999998754321 11346788999999999 999999999 799999999999999999999865432210
Q ss_pred ----c--------ccCCCCCCccCCcccccCC-CCC-CcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 ----V--------STDTADTIGYVPSEYGQAG-RAN-ERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ----~--------~~~~~~~~~y~aPE~~~~~-~~~-~~~DvwslGvvl~elltg~~P~~~ 864 (885)
. ......++.|++|+...-- ..+ .+.+.++.|+-+|.++|+..|.-.
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 1112246667777643322 223 567999999999999999988643
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-20 Score=168.68 Aligned_cols=180 Identities=31% Similarity=0.497 Sum_probs=143.0
Q ss_pred ccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCccc
Q 047790 379 NAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLS 458 (885)
Q Consensus 379 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~ 458 (885)
++...+.|.||+|+++ .+|..++.+.+|+.|++++|+|+ ..|..+..++.|+.|+++-|++.
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~---------------- 92 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN---------------- 92 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh----------------
Confidence 4456677777788876 56677777888888888888887 56777888888888888877775
Q ss_pred CCCchhcccCCCCCEEeccCccccC-CCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcE
Q 047790 459 GKIPGSLSRLTNLTTLNLFGNLLTG-SIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTH 537 (885)
Q Consensus 459 ~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~ 537 (885)
..|..|+.++.|+.|||+.|++.. .+|..|..+..|+.|+|+.|.+. .+|..++++++|+.
T Consensus 93 -~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-----------------~lp~dvg~lt~lqi 154 (264)
T KOG0617|consen 93 -ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-----------------ILPPDVGKLTNLQI 154 (264)
T ss_pred -cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-----------------cCChhhhhhcceeE
Confidence 677888888888888888887763 46888888888888888888887 56889999999999
Q ss_pred EEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccc---cceeecccCcCCCC
Q 047790 538 LDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPY---LLYLNLADNRLEGE 609 (885)
Q Consensus 538 L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~---L~~L~l~~N~l~~~ 609 (885)
|.+.+|.+- ++|.+++.|++|+.|.+.+|+++ .+|++++++.- =+++.+.+|+...+
T Consensus 155 l~lrdndll--------------~lpkeig~lt~lrelhiqgnrl~-vlppel~~l~l~~~k~v~r~E~NPwv~p 214 (264)
T KOG0617|consen 155 LSLRDNDLL--------------SLPKEIGDLTRLRELHIQGNRLT-VLPPELANLDLVGNKQVMRMEENPWVNP 214 (264)
T ss_pred EeeccCchh--------------hCcHHHHHHHHHHHHhcccceee-ecChhhhhhhhhhhHHHHhhhhCCCCCh
Confidence 999977765 78999999999999999999998 88988887643 24566778887543
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.2e-18 Score=167.52 Aligned_cols=142 Identities=15% Similarity=0.088 Sum_probs=111.9
Q ss_pred ecceecccCCceEEEEEeCCCCeEEEEEeccccccc--------------------------HHHHHHHHHHhcccCCCC
Q 047790 665 FENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQC--------------------------DREFAAEMETLDMVKHQN 718 (885)
Q Consensus 665 ~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~~~~ 718 (885)
+.+.||+|++|.||+|...+|+.||+|++....... ......|.+.+.++.+++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 1 INGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CCceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 457899999999999998789999999987542110 122457899999999998
Q ss_pred ccceeeeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCCCCcEEEcCC
Q 047790 719 LVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIKTSNILLNDY 797 (885)
Q Consensus 719 i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlkp~Nil~~~~ 797 (885)
+.....+... ..++||||++|+++...... ....+......++.|++.++.++| . .||+|||+||+||+++ +
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-~~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~-~ 153 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLK-DVPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH-D 153 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhhh-hccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-C
Confidence 7555544432 24899999988755443222 234778889999999999999999 7 9999999999999998 7
Q ss_pred CcEEEeeccCcccccC
Q 047790 798 FEAKVSDFGLARLISD 813 (885)
Q Consensus 798 ~~vkl~Dfg~a~~~~~ 813 (885)
+.++++|||.+.....
T Consensus 154 ~~~~liDFG~a~~~~~ 169 (190)
T cd05145 154 GKPYIIDVSQAVELDH 169 (190)
T ss_pred CCEEEEEcccceecCC
Confidence 8999999999977543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4e-19 Score=201.98 Aligned_cols=217 Identities=20% Similarity=0.243 Sum_probs=166.9
Q ss_pred EEeecceecccCCceEEEEEeCCCCeEEEEEecccccc-cHH---HHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ-CDR---EFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~-~~~---~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.+...+.+|.+.|=+|.+|++++|. |++|++-+..+. +.. +...|++ ...+++||++++..+.+.++..|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 4677899999999999999998887 888988665432 223 3333444 455689999999999888888999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc-cCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI-SDCES 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~-~~~~~ 816 (885)
|. ..+|.|++..+.. +.....+.|+.|++.|+..+| ..||+|||||.+||+++..+.+.|+||..-+.. -+++.
T Consensus 102 yv-khnLyDRlSTRPF-L~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 102 YV-KHNLYDRLSTRPF-LVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred HH-hhhhhhhhccchH-HHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 98 5699999986654 788889999999999999999 999999999999999999999999999764432 12121
Q ss_pred C-----cccCCCCCCccCCcccccCC----------C-CCCcchhHHHHHHHHHHHh-CCCCCCC------C--------
Q 047790 817 H-----VSTDTADTIGYVPSEYGQAG----------R-ANERGDIYSFGVILLELVT-GKQPTGP------E-------- 865 (885)
Q Consensus 817 ~-----~~~~~~~~~~y~aPE~~~~~----------~-~~~~~DvwslGvvl~ellt-g~~P~~~------~-------- 865 (885)
. .+.+..+...|.|||.+-.. . .+++.||||+||+++|+++ |++||.. .
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e 256 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPE 256 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHH
Confidence 1 22334456679999965542 2 4778999999999999887 6888762 0
Q ss_pred --CCCCCCCCHHHHHHHHHhcC
Q 047790 866 --FEDKDGGNLVDWVLLMMKKE 885 (885)
Q Consensus 866 --~~~~~~~~l~~~~~~~~~~~ 885 (885)
.++..+..+.++++.||..+
T Consensus 257 ~~Le~Ied~~~Rnlil~Mi~rd 278 (1431)
T KOG1240|consen 257 QLLEKIEDVSLRNLILSMIQRD 278 (1431)
T ss_pred HHHHhCcCccHHHHHHHHHccC
Confidence 12334567788888887653
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.3e-18 Score=197.78 Aligned_cols=198 Identities=19% Similarity=0.138 Sum_probs=161.8
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccC---CCCccceeeeeEeCCeeE
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK---HQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~---~~~i~~~~~~~~~~~~~~ 733 (885)
.+....|.|.+.+|+|+||.||+|...+|+.||+|+-+....++.--. .+++.+|+ -+.|..++..+...+..+
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~---~q~~~RLk~~~~~~~~~~~~a~~~~~~S~ 770 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYIC---LQVMERLKPQMLPSIMHISSAHVFQNASV 770 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeeh---HHHHHhhchhhhcchHHHHHHHccCCcce
Confidence 334567999999999999999999988899999999877665532111 11222232 466777777777788899
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-------CCcEEEeecc
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-------YFEAKVSDFG 806 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-------~~~vkl~Dfg 806 (885)
+|+||.+.|+|.+++. ..+.+++..++.++.|++..++++| ..+||||||||+|+++.. ..-++|+|||
T Consensus 771 lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG 846 (974)
T KOG1166|consen 771 LVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFG 846 (974)
T ss_pred eeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEecc
Confidence 9999999999999998 4455999999999999999999999 999999999999999942 2348999999
Q ss_pred CcccccC-CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCC
Q 047790 807 LARLISD-CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861 (885)
Q Consensus 807 ~a~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P 861 (885)
.+..+.- ++...+.....|-.|-.+|+..|+.++..+|.|.++.+++-|+.|++-
T Consensus 847 ~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 847 RSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred cceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 9876642 223345556788889999999999999999999999999999999864
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.8e-20 Score=198.57 Aligned_cols=160 Identities=23% Similarity=0.279 Sum_probs=71.3
Q ss_pred EEEecCCccc-ccccccccCCCCCcEEEccCCCCcCc----ccccccccCCcceeeccccccCCCCCcccCCCCceeEEe
Q 047790 266 YISLSNNKLS-GPIPRELCNSGSLVEINLDGNMLSGT----IEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDL 340 (885)
Q Consensus 266 ~L~Ls~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L 340 (885)
.|+|.++.++ ...+..+..+.+|+.|+++++.++.. ++..+...+++++|+++++.+.+ .+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~---------- 70 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGL---------- 70 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHH----------
Confidence 3555666665 23333344445566666666655432 22233334445555555544431 00000
Q ss_pred ecCccccccCccccCccccceeecccccccCCCccccccccc---ccEEEccCCcccc----cCccccccc-ccccceec
Q 047790 341 QYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVA---LEKLDLSSNMLTR----QIPKKIGNL-TNIQILKL 412 (885)
Q Consensus 341 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~---L~~L~Ls~N~l~~----~~p~~~~~l-~~L~~L~L 412 (885)
..++..+..+++|++|++++|.+.+..+..+..+.. |++|++++|++++ .+...+..+ ++|+.|++
T Consensus 71 ------~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L 144 (319)
T cd00116 71 ------QSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVL 144 (319)
T ss_pred ------HHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEc
Confidence 112233334445555555555554433333433333 5555555555542 122233333 45555555
Q ss_pred ccccccCc----CCCccCCCCcccEEEcCCcccC
Q 047790 413 NSNFFDGI----IPMEFGDCISLNTLDLGSNNLN 442 (885)
Q Consensus 413 s~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 442 (885)
++|.+++. ++..+..+++|++|++++|.++
T Consensus 145 ~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 178 (319)
T cd00116 145 GRNRLEGASCEALAKALRANRDLKELNLANNGIG 178 (319)
T ss_pred CCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCc
Confidence 55555521 2223444445555555555543
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-19 Score=198.43 Aligned_cols=57 Identities=25% Similarity=0.282 Sum_probs=26.1
Q ss_pred EecCCCccc-CcCCcCccCcCCCCEEeccCCcCCCC----CCccccccccccEeeeeccCCC
Q 047790 93 LDLSKNLLF-GQLSPQVSNLKRLKMLSVGENQLSGS----IPSQLGLLTRLETISLRSNSFT 149 (885)
Q Consensus 93 L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 149 (885)
|+|+++.++ +..+..+..+++|++|+++++.+++. ++..+...++|++|+++++.+.
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~ 64 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETG 64 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccC
Confidence 555555554 23333444445555555555555321 2333334444445555444443
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.71 E-value=4e-17 Score=161.12 Aligned_cols=106 Identities=25% Similarity=0.246 Sum_probs=94.3
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
|+|.+++..+...+++..+..++.|++.|++|+| +.+ ||+||+++.++.+++ ||.+...... .
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------~ 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPE------Q 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccc------c
Confidence 6899999876667999999999999999999999 666 999999999999999 9998765432 1
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..+++.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~ 106 (176)
T smart00750 64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNE 106 (176)
T ss_pred CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccc
Confidence 2578999999999999999999999999999999999999864
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.9e-18 Score=183.60 Aligned_cols=186 Identities=26% Similarity=0.263 Sum_probs=156.4
Q ss_pred eecccCCceEEEEE----eCCCCeEEEEEeccccc--ccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEEeccc
Q 047790 668 VIGGGGFRTAFKGT----MPDQKTVAVKKLSQATG--QCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 668 ~lG~G~~g~vy~a~----~~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
++|+|++|.|+.++ ...+..+|+|..++... ....+...|..++...+ ||.++++...++.+...++++++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37899999999864 23377788888876542 22236667888888887 9999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
||.+...+.... .+++.....+...++-+++++| +.+++|||+|++||+++.+|++++.|||.++..-..+..
T Consensus 81 gg~lft~l~~~~-~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~--- 153 (612)
T KOG0603|consen 81 GGDLFTRLSKEV-MFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA--- 153 (612)
T ss_pred cchhhhccccCC-chHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc---
Confidence 999988877544 4777888888888999999999 999999999999999999999999999998775432222
Q ss_pred CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 821 DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
+||..|||||++. ....+.|.||+|++++||+||..||..
T Consensus 154 --cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 154 --CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred --ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 8899999999988 667789999999999999999999986
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-16 Score=162.23 Aligned_cols=198 Identities=22% Similarity=0.305 Sum_probs=129.5
Q ss_pred EeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCC----------CCccceeeeeE-
Q 047790 663 IVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKH----------QNLVQLLGYCS- 727 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~----------~~i~~~~~~~~- 727 (885)
+..++.||.|+++.||++++.+ ++++|+|++.... ....+.+.+|.-....+.+ -.++-.++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 5567899999999999998765 8999999886432 2234566666655554332 12222222221
Q ss_pred --------eC---Ce-----eEEEEecccCCCHHHHHhh---cCCC---CCHHHHHHHHHHHHHHHHHHhccCCCCceec
Q 047790 728 --------VG---EE-----KLLVYEYMVNGSLDDWLRN---RAAS---LDWGKRCKIAYGAARGISFLHHGFKPYIIHM 785 (885)
Q Consensus 728 --------~~---~~-----~~lv~e~~~~~sL~~~l~~---~~~~---~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~ 785 (885)
.. .. .+++|+-+ .++|.+++.. .... ........+..|+.+.++++| ..|++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEec
Confidence 11 11 26788877 5588887652 2222 233444566689999999999 9999999
Q ss_pred CCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccC--------CCCCCcchhHHHHHHHHHHHh
Q 047790 786 DIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA--------GRANERGDIYSFGVILLELVT 857 (885)
Q Consensus 786 dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslGvvl~ellt 857 (885)
||+|+|++++.+|.++++||+.....+.. ... ...+..|.|||.... ..++.+.|.|++|+++|.++.
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~---~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTR---YRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEE---EEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCce---eec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 99999999999999999999987765431 111 344578999996543 246888999999999999999
Q ss_pred CCCCCCCCCCC
Q 047790 858 GKQPTGPEFED 868 (885)
Q Consensus 858 g~~P~~~~~~~ 868 (885)
|+.||+...++
T Consensus 246 ~~lPf~~~~~~ 256 (288)
T PF14531_consen 246 GRLPFGLSSPE 256 (288)
T ss_dssp SS-STCCCGGG
T ss_pred ccCCCCCCCcc
Confidence 99999965443
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.7e-16 Score=155.97 Aligned_cols=136 Identities=15% Similarity=0.253 Sum_probs=105.5
Q ss_pred cceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhccc-----CCCCccceeeeeEeCC---eeE-EEE
Q 047790 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMV-----KHQNLVQLLGYCSVGE---EKL-LVY 736 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-----~~~~i~~~~~~~~~~~---~~~-lv~ 736 (885)
.+.||+|+++.||. +++....++|++........+.+.+|+++++.+ .||||+++++++.++. ..+ +||
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 57899999999996 554444578888665444567799999999999 5799999999998763 333 789
Q ss_pred ec--ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHH-HHHhccCCCCceecCCCCCcEEEcC----CCcEEEee-ccCc
Q 047790 737 EY--MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGI-SFLHHGFKPYIIHMDIKTSNILLND----YFEAKVSD-FGLA 808 (885)
Q Consensus 737 e~--~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l-~~LH~~~~~~i~H~dlkp~Nil~~~----~~~vkl~D-fg~a 808 (885)
|| +.+++|.+++... .+++. ..++.+++.++ +||| +.+|+||||||+||+++. ...++|+| ||.+
T Consensus 85 e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 85 DFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred cCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 99 5578999999753 35555 34566777666 9999 999999999999999974 33799999 4544
Q ss_pred cc
Q 047790 809 RL 810 (885)
Q Consensus 809 ~~ 810 (885)
..
T Consensus 158 ~~ 159 (210)
T PRK10345 158 TF 159 (210)
T ss_pred ce
Confidence 33
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.9e-17 Score=187.77 Aligned_cols=199 Identities=20% Similarity=0.237 Sum_probs=156.2
Q ss_pred ecceecccCCceEEEEEe-CCCCeEEEEEeccc--cccc----HHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 665 FENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQA--TGQC----DREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 665 ~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~--~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.++.+|.|++|.|+.+.. .+.+..+.|.+... .... ...+..|.-+-..+.||+++.....+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 467889999998777754 33444555544310 1111 1225567777788899999888887766665555599
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC-
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES- 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~- 816 (885)
|+++ +|..++... ..+....+..++.|+..+++|+| ..|+.|||+|++|+++...|.+||+|||.+....-+..
T Consensus 402 ~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK 476 (601)
T ss_pred cccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCcch
Confidence 9999 999988754 34888899999999999999999 99999999999999999999999999999876543222
Q ss_pred --CcccCCCCCCccCCcccccCCCCCC-cchhHHHHHHHHHHHhCCCCCCCCCCC
Q 047790 817 --HVSTDTADTIGYVPSEYGQAGRANE-RGDIYSFGVILLELVTGKQPTGPEFED 868 (885)
Q Consensus 817 --~~~~~~~~~~~y~aPE~~~~~~~~~-~~DvwslGvvl~elltg~~P~~~~~~~ 868 (885)
.......|...|+|||+..+..|++ ..||||.|++++.|.+|+.||.....+
T Consensus 477 ~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~ 531 (601)
T KOG0590|consen 477 NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKS 531 (601)
T ss_pred hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccccccc
Confidence 4455667889999999999999975 579999999999999999999865444
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.5e-16 Score=159.56 Aligned_cols=142 Identities=15% Similarity=0.122 Sum_probs=111.2
Q ss_pred EEeecceecccCCceEEEEE--eCCCCeEEEEEecccccc------------------------cHHHHHHHHHHhcccC
Q 047790 662 IIVFENVIGGGGFRTAFKGT--MPDQKTVAVKKLSQATGQ------------------------CDREFAAEMETLDMVK 715 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~--~~~~~~valK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 715 (885)
.|.+.+.||+|++|.||+|. ..+|+.||+|+++..... ....+..|+++++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999998 567999999998743210 0123568999999997
Q ss_pred CC--CccceeeeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCC-ceecCCCCCcE
Q 047790 716 HQ--NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY-IIHMDIKTSNI 792 (885)
Q Consensus 716 ~~--~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~-i~H~dlkp~Ni 792 (885)
+. .+++++++ ...++||||++|.++....... ...+...+..++.|++.+++++| +.| ++|||+||+||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~NI 180 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEYNI 180 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChhhE
Confidence 53 33444432 2358999999998887654322 33566677899999999999999 999 99999999999
Q ss_pred EEcCCCcEEEeeccCccccc
Q 047790 793 LLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 793 l~~~~~~vkl~Dfg~a~~~~ 812 (885)
+++ ++.++++|||.+....
T Consensus 181 li~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEE-CCCEEEEEChhhhccC
Confidence 999 7889999999987644
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.6e-16 Score=182.89 Aligned_cols=149 Identities=30% Similarity=0.528 Sum_probs=95.1
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCc----ccCCccccCC------cEEEEEEecccccccccccccCCCCC
Q 047790 21 IDEPKQERRSLVHFKNSLQNPQVLSGWNKTTRHC----HWFGVKCRHS------RVVSLVIQTQSLKGPVSPFLFNLSSL 90 (885)
Q Consensus 21 ~~~~~~~~~aLl~~k~~~~~~~~~~~w~~~~~~c----~w~gv~c~~~------~v~~l~l~~~~l~g~~~~~l~~l~~L 90 (885)
..+.++|.+||+++|+++.++.. .+|. +..|| .|.||.|... +|+.|+|+++++.|.+|+.+..+++|
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~-~~W~-g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L 444 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLR-FGWN-GDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHL 444 (623)
T ss_pred cccCchHHHHHHHHHHhcCCccc-CCCC-CCCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCC
Confidence 35677899999999999976432 4896 44443 7999999521 35666666666666666666666666
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCC-ccCceEEccC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDI-KQLKSLDFSG 169 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~Ls~ 169 (885)
+.|+|++|.+.|.+|+.++.+++|+.|+|++|+++|.+|+.++.+++|++|+|++|+++|.+|..++.+ .++..+++++
T Consensus 445 ~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~ 524 (623)
T PLN03150 445 QSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTD 524 (623)
T ss_pred CEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecC
Confidence 666666666666666666666666666666666666666666666666666666666666666555432 3444555555
Q ss_pred Cc
Q 047790 170 NG 171 (885)
Q Consensus 170 N~ 171 (885)
|.
T Consensus 525 N~ 526 (623)
T PLN03150 525 NA 526 (623)
T ss_pred Cc
Confidence 54
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-16 Score=154.41 Aligned_cols=198 Identities=22% Similarity=0.386 Sum_probs=152.8
Q ss_pred EeecceecccCCceEEEEEeCCCCeEEEEEec--ccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLS--QATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~--~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
..+..+|.+...|..|+|+|..+..| +|++. ...+...++|..|...++...||||+++++.+.......++..|++
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgndiv-akil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGNDIV-AKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhhhccCCCcccccccccCcchh-hhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 45567888999999999999776654 45543 3445556789999999999999999999999998889999999999
Q ss_pred CCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEe--eccCcccccCCCCC
Q 047790 741 NGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVS--DFGLARLISDCESH 817 (885)
Q Consensus 741 ~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~--Dfg~a~~~~~~~~~ 817 (885)
.|+|..+++... ...+..++.+++.+++.+++|||+- ..-|.---+....+++|++...+|. |--+++
T Consensus 271 ~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsf-------- 341 (448)
T KOG0195|consen 271 FGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF-------- 341 (448)
T ss_pred chHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeee--------
Confidence 999999998533 2267778999999999999999942 2223344688899999998777664 321111
Q ss_pred cccCCCCCCccCCcccccCCCCC---CcchhHHHHHHHHHHHhCCCCCCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRAN---ERGDIYSFGVILLELVTGKQPTGPEFEDKD 870 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~---~~~DvwslGvvl~elltg~~P~~~~~~~~~ 870 (885)
......-.+.|++||.++.++-+ .++|+|||++++||+.|...||..-.+-|.
T Consensus 342 qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec 397 (448)
T KOG0195|consen 342 QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC 397 (448)
T ss_pred eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh
Confidence 11222345789999999887643 478999999999999999999986544333
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.8e-15 Score=151.72 Aligned_cols=135 Identities=21% Similarity=0.240 Sum_probs=113.2
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEecccccc--------cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ--------CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~--------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+.||+|++|.||+|.+ .+..+++|+....... ...++.+|++++..+.|+++.....++......+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5789999999999987 6677888876533211 123577899999999999988887777777888999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
++|++|.+++.... . ....++.+++.+++++| +.+++|||++|.||+++ .+.++++|||.+...
T Consensus 81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~ 144 (211)
T PRK14879 81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFS 144 (211)
T ss_pred eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence 99999999886432 1 77889999999999999 99999999999999999 778999999988653
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.3e-15 Score=149.78 Aligned_cols=131 Identities=21% Similarity=0.264 Sum_probs=107.1
Q ss_pred eecccCCceEEEEEeCCCCeEEEEEecccccc--------cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 668 VIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ--------CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~--------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.||+|++|.||+|.+ +++.+++|........ ...++.+|+++++.++++++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 479999999999985 5678899986532211 1256778999999999887666666666677789999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
+|+++.+++..... .++.+++.+++++| +.|++|||++|.||+++ ++.++++|||.+...
T Consensus 80 ~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGND--------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcHH--------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999988764211 78999999999999 99999999999999999 789999999998764
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.2e-15 Score=149.41 Aligned_cols=136 Identities=19% Similarity=0.122 Sum_probs=108.2
Q ss_pred EeecceecccCCceEEEEEeCCCCeEEEEEecccccc----------------------cHHHHHHHHHHhcccCCCC--
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ----------------------CDREFAAEMETLDMVKHQN-- 718 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~----------------------~~~~~~~E~~~l~~l~~~~-- 718 (885)
|.+.+.||+|+||.||+|..++|+.||+|++...... .......|..++.++.+++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 7788999999999999999888999999987543210 0123567888888887773
Q ss_pred ccceeeeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC
Q 047790 719 LVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798 (885)
Q Consensus 719 i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~ 798 (885)
+...++ ....++||||++|+++...... .....++.+++.++.++| +.|++|||++|+||++++++
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEEEcCCC
Confidence 444443 2455899999999998765431 245678899999999999 89999999999999999999
Q ss_pred cEEEeeccCccccc
Q 047790 799 EAKVSDFGLARLIS 812 (885)
Q Consensus 799 ~vkl~Dfg~a~~~~ 812 (885)
.++++|||.+....
T Consensus 163 ~~~liDfg~~~~~~ 176 (198)
T cd05144 163 KIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEEECCccccCC
Confidence 99999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.5e-15 Score=152.46 Aligned_cols=144 Identities=23% Similarity=0.273 Sum_probs=110.9
Q ss_pred CCCCccceeeeeEe---------------------------CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHH
Q 047790 715 KHQNLVQLLGYCSV---------------------------GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGA 767 (885)
Q Consensus 715 ~~~~i~~~~~~~~~---------------------------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l 767 (885)
+||||++++++|.+ ....|+||..+ ..+|..++-.+. .+.....-+..|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~--~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH--RSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC--CchHHHHHHHHHH
Confidence 49999999988743 13459999988 559999997654 6777788899999
Q ss_pred HHHHHHHhccCCCCceecCCCCCcEEEc--CC--CcEEEeeccCcccccC---CCCCc--ccCCCCCCccCCcccccCCC
Q 047790 768 ARGISFLHHGFKPYIIHMDIKTSNILLN--DY--FEAKVSDFGLARLISD---CESHV--STDTADTIGYVPSEYGQAGR 838 (885)
Q Consensus 768 ~~~l~~LH~~~~~~i~H~dlkp~Nil~~--~~--~~vkl~Dfg~a~~~~~---~~~~~--~~~~~~~~~y~aPE~~~~~~ 838 (885)
++|+.||| ++||.|||+|.+||++. ++ -.+.++|||++-.-.. .-... .-...|....||||+....+
T Consensus 351 LEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 351 LEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 99999999 99999999999999994 22 2468899997632111 01111 12345778899999877643
Q ss_pred C------CCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 839 A------NERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 839 ~------~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
- -.++|.|+.|.+.||+++...||..
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~ 459 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYK 459 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccc
Confidence 2 3479999999999999999999975
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-14 Score=166.88 Aligned_cols=137 Identities=23% Similarity=0.266 Sum_probs=111.1
Q ss_pred EEeecceecccCCceEEEEEeCCCCeEEEEEeccccc-------ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG-------QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~-------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.|...+.||+|+||.||+|.+.+...++.++..+... ....++.+|+++++.++|++++..+.+.......++
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l 413 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTI 413 (535)
T ss_pred ccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEE
Confidence 3466899999999999999876554433333322111 113568899999999999999888877777777899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
||||++|++|.+++. ....++.++++++.++| +.+++|||+||+||++ .++.++++|||.++..
T Consensus 414 v~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 414 VMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 999999999999885 34678999999999999 9999999999999999 5678999999998764
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.8e-15 Score=167.23 Aligned_cols=165 Identities=20% Similarity=0.289 Sum_probs=121.3
Q ss_pred eEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.+|..++++..|++|.||.++++. .+++|+ ++++.. .+.+- ++.....|+++
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~-----lilRn--ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQN-----LILRN--ILTFAGNPFVV------------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhh-cccccc-----hhhhc--cccccCCccee-------------------
Confidence 358889999999999999998875 556777 443321 11111 33334444444
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC------
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD------ 813 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~------ 813 (885)
|+-...++..+. .+.+. +.+++|+| +.||+|||+||+|.+++.-|++|++|||+++....
T Consensus 136 --gDc~tllk~~g~-lPvdm--------vla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl 201 (1205)
T KOG0606|consen 136 --GDCATLLKNIGP-LPVDM--------VLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNL 201 (1205)
T ss_pred --chhhhhcccCCC-Ccchh--------hHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchh
Confidence 344444443221 22211 66899999 99999999999999999999999999999865421
Q ss_pred --------CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 814 --------CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 814 --------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.........++|+.|.|||++..++|....|.|++|+++||.+.|+.||.+..
T Consensus 202 ~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt 262 (1205)
T KOG0606|consen 202 KEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT 262 (1205)
T ss_pred hhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC
Confidence 01122344579999999999999999999999999999999999999998773
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.5e-14 Score=138.80 Aligned_cols=133 Identities=18% Similarity=0.159 Sum_probs=98.2
Q ss_pred ecceecccCCceEEEEEeCCCCeEEEEEeccccccc--HHH----------------------HHHHHHHhcccCCCC--
Q 047790 665 FENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQC--DRE----------------------FAAEMETLDMVKHQN-- 718 (885)
Q Consensus 665 ~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~~~~-- 718 (885)
+.+.||+|+||.||+|...+++.||+|++....... ... ...|.+.+..+.+..
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 1 VGGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CCcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 357899999999999998889999999886532211 011 134566666554432
Q ss_pred ccceeeeeEeCCeeEEEEecccCCC-----HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCCCCcE
Q 047790 719 LVQLLGYCSVGEEKLLVYEYMVNGS-----LDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIKTSNI 792 (885)
Q Consensus 719 i~~~~~~~~~~~~~~lv~e~~~~~s-----L~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlkp~Ni 792 (885)
+.+++++ ...++||||++++. +.+... . ..+..++.+++.++.++| . .+|+|||+||+||
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~------~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Ni 146 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRL------L-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNI 146 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhhh------c-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhE
Confidence 4444443 23589999998843 333221 1 567889999999999999 7 9999999999999
Q ss_pred EEcCCCcEEEeeccCccccc
Q 047790 793 LLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 793 l~~~~~~vkl~Dfg~a~~~~ 812 (885)
+++ ++.++++|||.+....
T Consensus 147 li~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 147 LVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred EEE-CCcEEEEECccccccc
Confidence 999 8899999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.3e-16 Score=163.99 Aligned_cols=170 Identities=32% Similarity=0.490 Sum_probs=92.1
Q ss_pred EEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchh
Q 047790 385 KLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGS 464 (885)
Q Consensus 385 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~ 464 (885)
..||+.|++. .+|..+..+..|..+.|.+|.|. .+|..++++..|.+|||+.|+++ .+|..
T Consensus 79 ~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-----------------~lp~~ 139 (722)
T KOG0532|consen 79 FADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-----------------HLPDG 139 (722)
T ss_pred hhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-----------------cCChh
Confidence 3455555554 45555555555555555555555 45555555555555555555554 44444
Q ss_pred cccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCC
Q 047790 465 LSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNE 544 (885)
Q Consensus 465 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 544 (885)
++.++ |+.|-+++|+++ .+|+.++.+..|..||.+.|++. .+|..++.+.+|+.|++..|+
T Consensus 140 lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-----------------slpsql~~l~slr~l~vrRn~ 200 (722)
T KOG0532|consen 140 LCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-----------------SLPSQLGYLTSLRDLNVRRNH 200 (722)
T ss_pred hhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-----------------hchHHhhhHHHHHHHHHhhhh
Confidence 44443 555555555555 45555555555555555555554 335555555555555555443
Q ss_pred CCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCC
Q 047790 545 LDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEG 608 (885)
Q Consensus 545 l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~ 608 (885)
+. .+|++++.| .|..||+|.|+++ .||-.|..|..|++|-|.+|+|+.
T Consensus 201 l~--------------~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 201 LE--------------DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred hh--------------hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCC
Confidence 33 445555533 3555666666665 556666666666666666666654
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.6e-13 Score=131.55 Aligned_cols=135 Identities=18% Similarity=0.159 Sum_probs=112.7
Q ss_pred ecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCC--CCccceeeeeEeCCeeEEEEecccCC
Q 047790 665 FENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH--QNLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 665 ~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
+.+.+|+|.++.||++...+ +.+++|....... ..++.+|+++++.+++ ..+++++.+...++..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 45789999999999998755 7899998865433 4678899999999986 58999998888778899999999887
Q ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 743 SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 743 sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.+..
T Consensus 79 ~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 66543 4456677899999999999944335899999999999999988999999998754
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.5e-15 Score=160.39 Aligned_cols=189 Identities=27% Similarity=0.427 Sum_probs=153.5
Q ss_pred eeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcc
Q 047790 361 EFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNN 440 (885)
Q Consensus 361 ~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 440 (885)
..+++.|++. .+|..++.+..|+.+.|..|.+. .+|..+.++..|++|||+.|+++ ..|..++.|+ |+.|-+++|+
T Consensus 79 ~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNk 154 (722)
T KOG0532|consen 79 FADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNK 154 (722)
T ss_pred hhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCc
Confidence 3444444443 45566777778888888888886 78899999999999999999998 6788888887 8889899888
Q ss_pred cCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCc
Q 047790 441 LNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNK 520 (885)
Q Consensus 441 l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~ 520 (885)
++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|++..|++.
T Consensus 155 l~-----------------~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-------------- 202 (722)
T KOG0532|consen 155 LT-----------------SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-------------- 202 (722)
T ss_pred cc-----------------cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh--------------
Confidence 86 77888888899999999999998 78999999999999999999988
Q ss_pred cCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCc---cccc
Q 047790 521 LYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSL---PYLL 597 (885)
Q Consensus 521 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l---~~L~ 597 (885)
.+|.+++. -.|..||+|+|++. .||-+|.+|+.|++|-|.+|.|+ ..|..++.. --.+
T Consensus 203 ---~lp~El~~-LpLi~lDfScNkis--------------~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFK 263 (722)
T KOG0532|consen 203 ---DLPEELCS-LPLIRLDFSCNKIS--------------YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFK 263 (722)
T ss_pred ---hCCHHHhC-CceeeeecccCcee--------------ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeee
Confidence 45777774 44888999987776 78999999999999999999998 677777543 3346
Q ss_pred eeecccC
Q 047790 598 YLNLADN 604 (885)
Q Consensus 598 ~L~l~~N 604 (885)
+|+..-.
T Consensus 264 yL~~qA~ 270 (722)
T KOG0532|consen 264 YLSTQAC 270 (722)
T ss_pred eecchhc
Confidence 6666655
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.45 E-value=9.1e-13 Score=135.51 Aligned_cols=134 Identities=19% Similarity=0.183 Sum_probs=102.6
Q ss_pred ceec-ccCCceEEEEEeCCCCeEEEEEecccc-------------cccHHHHHHHHHHhcccCCCCc--cceeeeeEeCC
Q 047790 667 NVIG-GGGFRTAFKGTMPDQKTVAVKKLSQAT-------------GQCDREFAAEMETLDMVKHQNL--VQLLGYCSVGE 730 (885)
Q Consensus 667 ~~lG-~G~~g~vy~a~~~~~~~valK~~~~~~-------------~~~~~~~~~E~~~l~~l~~~~i--~~~~~~~~~~~ 730 (885)
..+| .|+.|.||.+... +..+++|.+.... .....++.+|++++..++|+++ ++.+++...+.
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4576 7888889988764 6778998875311 1223567889999999998774 66666643322
Q ss_pred ----eeEEEEecccC-CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeec
Q 047790 731 ----EKLLVYEYMVN-GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDF 805 (885)
Q Consensus 731 ----~~~lv~e~~~~-~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Df 805 (885)
..++|||+++| .+|.+++... .++.. .+.+++.+++++| +.||+|||+||+||+++.++.++++||
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LIDf 186 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLIDF 186 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEEC
Confidence 23599999997 6999888642 24443 3568899999999 999999999999999998889999999
Q ss_pred cCccc
Q 047790 806 GLARL 810 (885)
Q Consensus 806 g~a~~ 810 (885)
|.+..
T Consensus 187 g~~~~ 191 (239)
T PRK01723 187 DRGEL 191 (239)
T ss_pred CCccc
Confidence 98865
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.6e-13 Score=151.10 Aligned_cols=188 Identities=36% Similarity=0.534 Sum_probs=147.2
Q ss_pred cccccccEEEccCCcccccCcccccccc-cccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCc
Q 047790 378 SNAVALEKLDLSSNMLTRQIPKKIGNLT-NIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNM 456 (885)
Q Consensus 378 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~ 456 (885)
..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|+++
T Consensus 113 ~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-------------- 176 (394)
T COG4886 113 LELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-------------- 176 (394)
T ss_pred hcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh--------------
Confidence 34467888888888887 4566666664 8888888888888 46677888888888888888886
Q ss_pred ccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCc
Q 047790 457 LSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLT 536 (885)
Q Consensus 457 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~ 536 (885)
.+|...+.+++|+.|++++|+++ .+|........|++|++++|++. ..+..+.++.++.
T Consensus 177 ---~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-----------------~~~~~~~~~~~l~ 235 (394)
T COG4886 177 ---DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-----------------ELLSSLSNLKNLS 235 (394)
T ss_pred ---hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-----------------ecchhhhhccccc
Confidence 56666667888888999999988 67777666777888999988643 3367788888888
Q ss_pred EEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccc
Q 047790 537 HLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGIC 616 (885)
Q Consensus 537 ~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~ 616 (885)
.|.+++|++. .+|..++++++|++|++++|+++ .++. +..+.+|+.|++++|.+...+|.....
T Consensus 236 ~l~l~~n~~~--------------~~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~~ 299 (394)
T COG4886 236 GLELSNNKLE--------------DLPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPLIALL 299 (394)
T ss_pred ccccCCceee--------------eccchhccccccceecccccccc-cccc-ccccCccCEEeccCccccccchhhhcc
Confidence 8888877765 33677888888999999999998 5665 888999999999999998877766544
Q ss_pred cc
Q 047790 617 QN 618 (885)
Q Consensus 617 ~~ 618 (885)
..
T Consensus 300 ~~ 301 (394)
T COG4886 300 LL 301 (394)
T ss_pred ch
Confidence 43
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.5e-13 Score=147.37 Aligned_cols=122 Identities=28% Similarity=0.400 Sum_probs=104.5
Q ss_pred CeeEEEEecccCCCHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 730 EEKLLVYEYMVNGSLDDWLRN--RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~--~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
.+.|+.|++|.-.+|.+++.. .....+......++.|++.++.| ++.+|+|+||.||++..+..+||.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhh
Confidence 357899999999999999963 33446778889999999999887 6899999999999999999999999999
Q ss_pred cccccCCC-----CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh
Q 047790 808 ARLISDCE-----SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT 857 (885)
Q Consensus 808 a~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt 857 (885)
........ ........+|..||+||.+.+..|+.++|+||+|++++|+++
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 87765433 112234568999999999999999999999999999999998
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.35 E-value=2e-12 Score=141.88 Aligned_cols=166 Identities=28% Similarity=0.457 Sum_probs=134.2
Q ss_pred hcccCCCCccceeeeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCc-eecCCCC
Q 047790 711 LDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI-IHMDIKT 789 (885)
Q Consensus 711 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i-~H~dlkp 789 (885)
++.+.|.|+.++++.+.++...+.|.+|+..|+|.+.+......+++--...+.++++.+++|+|. ..| .|+.++.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHN---SPIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhc---Ccceeeeeecc
Confidence 467899999999999999999999999999999999999877778988899999999999999994 444 9999999
Q ss_pred CcEEEcCCCcEEEeeccCcccccC-CCCCcccCCCCCCccCCcccccCCC-------CCCcchhHHHHHHHHHHHhCCCC
Q 047790 790 SNILLNDYFEAKVSDFGLARLISD-CESHVSTDTADTIGYVPSEYGQAGR-------ANERGDIYSFGVILLELVTGKQP 861 (885)
Q Consensus 790 ~Nil~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~-------~~~~~DvwslGvvl~elltg~~P 861 (885)
.|-+++....+|++|||+.....+ .............-|.|||.+.+.. .+.+.|+||||++++|+++..-|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 999999999999999999876532 1111112222445699999888742 35679999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHH
Q 047790 862 TGPEFEDKDGGNLVDWVL 879 (885)
Q Consensus 862 ~~~~~~~~~~~~l~~~~~ 879 (885)
|......+....++.+++
T Consensus 158 ~~~~~~~~~~~eii~~~~ 175 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVK 175 (484)
T ss_pred cccccccCChHHHHHHHH
Confidence 987655544334444433
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.35 E-value=9.5e-13 Score=147.73 Aligned_cols=201 Identities=37% Similarity=0.512 Sum_probs=121.8
Q ss_pred EEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCc-cCceEEccCCcCCccCCcccCCCCCCcccccccc
Q 047790 116 MLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIK-QLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194 (885)
Q Consensus 116 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 194 (885)
.|+++.|.+.. .+..+..++.++.|++.+|.++ .+|.....++ +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 46666666532 2233444566666666666666 5555555553 6666666666666 44455666666666666666
Q ss_pred ccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcc
Q 047790 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKL 274 (885)
Q Consensus 195 ~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 274 (885)
+++ .+|.. ...++.|+.|++++|+++ .+|..+.....|+++.++.|+ .-.++..+.++..+..+.+.+|++
T Consensus 174 ~l~-~l~~~-~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~------~~~~~~~~~~~~~l~~l~l~~n~~ 244 (394)
T COG4886 174 DLS-DLPKL-LSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNS------IIELLSSLSNLKNLSGLELSNNKL 244 (394)
T ss_pred hhh-hhhhh-hhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCc------ceecchhhhhcccccccccCCcee
Confidence 666 55543 225666666666666666 455554444556666655443 113344556666677777777776
Q ss_pred cccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccC
Q 047790 275 SGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYIS 331 (885)
Q Consensus 275 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 331 (885)
. ..+..+..+.+++.|++++|+++.... +..+.+++.|++++|.+....|....
T Consensus 245 ~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 245 E-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred e-eccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhhc
Confidence 6 335666667777777777777776555 66667777777777777665555443
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.4e-13 Score=155.14 Aligned_cols=118 Identities=37% Similarity=0.564 Sum_probs=87.1
Q ss_pred cceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccc
Q 047790 495 VQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEY 574 (885)
Q Consensus 495 L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~ 574 (885)
++.|+|++|.++|.+ |.+|+.+++|+.|+|+ +|+++|.+|..++.+++|+.
T Consensus 420 v~~L~L~~n~L~g~i----------------p~~i~~L~~L~~L~Ls-------------~N~l~g~iP~~~~~l~~L~~ 470 (623)
T PLN03150 420 IDGLGLDNQGLRGFI----------------PNDISKLRHLQSINLS-------------GNSIRGNIPPSLGSITSLEV 470 (623)
T ss_pred EEEEECCCCCccccC----------------CHHHhCCCCCCEEECC-------------CCcccCcCChHHhCCCCCCE
Confidence 556666666666544 6677777788888877 55556677888888888888
Q ss_pred cccccccCCCCCCccccCccccceeecccCcCCCCCCCCc--cccccccccccCCccccccccCCcccc
Q 047790 575 LDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSG--ICQNLSIISLTGNKDLCEKIMGSDCQI 641 (885)
Q Consensus 575 L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~--~~~~~~~~~~~~N~~~c~~~~~~~c~~ 641 (885)
|||++|+++|.+|..++++++|++|+|++|+++|.+|..- ....+..+++.+|+++|+.|.-..|..
T Consensus 471 LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~~ 539 (623)
T PLN03150 471 LDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACGP 539 (623)
T ss_pred EECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCccccCCCCCCCCcc
Confidence 8888888888888888888888888888888888777542 123445678999999998776567853
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.8e-13 Score=154.18 Aligned_cols=207 Identities=22% Similarity=0.293 Sum_probs=166.5
Q ss_pred eEEeecceecccCCceEEEEEeCC--CCeEEEEEecccc--cccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD--QKTVAVKKLSQAT--GQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~--~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 735 (885)
..|.+.+.||+|+|+.|-.+.... ...+|.|.+.... .....++..|..+-+.+. |+|++.+++...+.+..++.
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 347788889999999998876432 4456666665432 233455666777777777 99999999999999999999
Q ss_pred EecccCCCHHHHH-hhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-cEEEeeccCcccccC
Q 047790 736 YEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-EAKVSDFGLARLISD 813 (885)
Q Consensus 736 ~e~~~~~sL~~~l-~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-~vkl~Dfg~a~~~~~ 813 (885)
++|..|+++.+.+ .......+......+..|+..++.|+|. ..++.|+|+||+|.+++..+ ..+++|||.|..+..
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 9999999999888 5433257777888999999999999996 68899999999999999998 999999999988765
Q ss_pred --CCCCcccCCCC-CCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 047790 814 --CESHVSTDTAD-TIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEFEDK 869 (885)
Q Consensus 814 --~~~~~~~~~~~-~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~~~~ 869 (885)
..........| ++.|+|||...+. ...+..|+||.|+++..+++|..||.......
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~ 237 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD 237 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc
Confidence 22333345567 9999999998885 44678999999999999999999998654443
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.4e-11 Score=137.93 Aligned_cols=142 Identities=21% Similarity=0.252 Sum_probs=99.6
Q ss_pred cceecccCCceEEEEEeCCCCeEEEEEeccccccc----------------------------------------HHHHH
Q 047790 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQC----------------------------------------DREFA 705 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~----------------------------------------~~~~~ 705 (885)
.+.||.|++|.||+|+.++|+.||||+.+...... +-++.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 46799999999999999999999999985432100 01244
Q ss_pred HHHHHhcccC-----CCCccceeeeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHH-HHHHHhccCC
Q 047790 706 AEMETLDMVK-----HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR-GISFLHHGFK 779 (885)
Q Consensus 706 ~E~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~-~l~~LH~~~~ 779 (885)
+|++.+++++ +++|.-..-+.......++||||++|+++.++........+ ...++.+++. .+..+| .
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~---~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVL---R 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHH---h
Confidence 5555555543 23322111222223457899999999999887653222232 3445666655 467888 8
Q ss_pred CCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 780 ~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
.|++|+|++|.||++++++.++++|||.+..+.+
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 9999999999999999999999999999877653
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.4e-10 Score=126.39 Aligned_cols=173 Identities=17% Similarity=0.207 Sum_probs=131.1
Q ss_pred EEE--EEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCHHHHHhhcCCC
Q 047790 677 AFK--GTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAAS 754 (885)
Q Consensus 677 vy~--a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~ 754 (885)
+|. .+..++.+|.+..++...........+-++.++.++||+|+++++.++.++..|+|+|.+. -|..++...
T Consensus 27 ~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l--- 101 (690)
T KOG1243|consen 27 LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL--- 101 (690)
T ss_pred cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh---
Confidence 554 3455788888888876554334556777889999999999999999999999999999884 566666643
Q ss_pred CCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccc
Q 047790 755 LDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834 (885)
Q Consensus 755 ~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~ 834 (885)
....+...++||+.||.+||+ +.+++|++|.-..|+|+..|+.||++|.++.....-.. .......-..|..|+.+
T Consensus 102 -~~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 102 -GKEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEI 177 (690)
T ss_pred -HHHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhc
Confidence 356778889999999999986 78899999999999999999999999998755432111 11111222345666655
Q ss_pred cCCCCCCcchhHHHHHHHHHHHhCCC
Q 047790 835 QAGRANERGDIYSFGVILLELVTGKQ 860 (885)
Q Consensus 835 ~~~~~~~~~DvwslGvvl~elltg~~ 860 (885)
.... ...|.|.||++++|++.|..
T Consensus 178 ~~s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 178 DPSE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred Cccc--cchhhhhHHHHHHHHhCccc
Confidence 4444 34699999999999999933
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=114.15 Aligned_cols=128 Identities=17% Similarity=0.146 Sum_probs=94.9
Q ss_pred cceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCc-cceeeeeEeCCeeEEEEecccCCCH
Q 047790 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNL-VQLLGYCSVGEEKLLVYEYMVNGSL 744 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~~~sL 744 (885)
.+.++.|.++.||+++.. ++.|++|....... ....+..|+++++.+.+..+ .+++.+. ....++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 356888999999999865 67899998755432 23356789999998875544 4444443 2345899999999877
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCC-----ceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 745 DDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY-----IIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 745 ~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~-----i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.+. . . .......+++++++.|| ..+ ++|||++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~-~-----~---~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTE-D-----F---SDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc-c-----c---cCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 543 0 1 11245678999999999 666 49999999999999 56899999998754
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.1e-11 Score=122.57 Aligned_cols=84 Identities=24% Similarity=0.258 Sum_probs=53.1
Q ss_pred ccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCcccc
Q 047790 403 NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT 482 (885)
Q Consensus 403 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 482 (885)
....|+.+|||+|.|+ .+.++..-++.++.|++|+|.|. . -..+..+++|+.||||+|.++
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-----------------~-v~nLa~L~~L~~LDLS~N~Ls 342 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-----------------T-VQNLAELPQLQLLDLSGNLLA 342 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-----------------e-ehhhhhcccceEeecccchhH
Confidence 3456777777777776 45566666677777777777774 2 233666777777788777776
Q ss_pred CCCCCCcccccccceeeeccccce
Q 047790 483 GSIPPEFGDSLKVQGLYLGHNQLT 506 (885)
Q Consensus 483 ~~~p~~~~~l~~L~~L~Ls~N~l~ 506 (885)
.+..+-.++-+.+.|.|+.|.+.
T Consensus 343 -~~~Gwh~KLGNIKtL~La~N~iE 365 (490)
T KOG1259|consen 343 -ECVGWHLKLGNIKTLKLAQNKIE 365 (490)
T ss_pred -hhhhhHhhhcCEeeeehhhhhHh
Confidence 34444444555555555555544
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.16 E-value=6e-12 Score=124.37 Aligned_cols=46 Identities=35% Similarity=0.429 Sum_probs=28.4
Q ss_pred hccCcccccccccccccCCCC-CCccccCccccceeecccCcCCCCC
Q 047790 565 ELGNLVQLEYLDFSMNMLDGH-IPEKLCSLPYLLYLNLADNRLEGEV 610 (885)
Q Consensus 565 ~~~~l~~L~~L~Ls~N~l~~~-ip~~l~~l~~L~~L~l~~N~l~~~~ 610 (885)
.++.|-+|+.||+++|++... --..++++|.|+.+.|.+|+|.+.+
T Consensus 369 GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 369 GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 455666677777777776521 1234666777777777777776543
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.8e-12 Score=140.89 Aligned_cols=217 Identities=27% Similarity=0.335 Sum_probs=118.1
Q ss_pred ceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceeccc
Q 047790 335 LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNS 414 (885)
Q Consensus 335 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 414 (885)
++.+++..|++..... .+..+++|++|++++|.|+.+.+ +..++.|+.|++++|.|+.+ ..+..++.|+.+++++
T Consensus 97 l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~ 171 (414)
T KOG0531|consen 97 LEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSY 171 (414)
T ss_pred eeeeeccccchhhccc-chhhhhcchheeccccccccccc--hhhccchhhheeccCcchhc--cCCccchhhhcccCCc
Confidence 4444444444443211 13445555555555555554332 34445567777777777532 4455566777777777
Q ss_pred ccccCcCC-CccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCccccc
Q 047790 415 NFFDGIIP-MEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL 493 (885)
Q Consensus 415 N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 493 (885)
|.++.+-+ . ...+.+++.+++++|.+. ....+..+..+..+++.+|.++..-+ +..+.
T Consensus 172 n~i~~ie~~~-~~~~~~l~~l~l~~n~i~------------------~i~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~ 230 (414)
T KOG0531|consen 172 NRIVDIENDE-LSELISLEELDLGGNSIR------------------EIEGLDLLKKLVLLSLLDNKISKLEG--LNELV 230 (414)
T ss_pred chhhhhhhhh-hhhccchHHHhccCCchh------------------cccchHHHHHHHHhhcccccceeccC--cccch
Confidence 77764433 1 456666667777776663 22334444455555666776663222 11122
Q ss_pred --ccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccc
Q 047790 494 --KVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQ 571 (885)
Q Consensus 494 --~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~ 571 (885)
.|+.+++++|++. .++..+..+..+..|++++|++..+. .+...+.
T Consensus 231 ~~~L~~l~l~~n~i~-----------------~~~~~~~~~~~l~~l~~~~n~~~~~~---------------~~~~~~~ 278 (414)
T KOG0531|consen 231 MLHLRELYLSGNRIS-----------------RSPEGLENLKNLPVLDLSSNRISNLE---------------GLERLPK 278 (414)
T ss_pred hHHHHHHhcccCccc-----------------cccccccccccccccchhhccccccc---------------cccccch
Confidence 2666777777665 12245566677777777766665432 2334456
Q ss_pred ccccccccccCCC---CCCcc-ccCccccceeecccCcCCCC
Q 047790 572 LEYLDFSMNMLDG---HIPEK-LCSLPYLLYLNLADNRLEGE 609 (885)
Q Consensus 572 L~~L~Ls~N~l~~---~ip~~-l~~l~~L~~L~l~~N~l~~~ 609 (885)
+..+.++.|++.. ..... ....+.+....+..|+....
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (414)
T KOG0531|consen 279 LSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKI 320 (414)
T ss_pred HHHhccCcchhcchhhhhccccccccccccccccccCccccc
Confidence 6666666666652 12221 44566666677777766553
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.4e-11 Score=128.38 Aligned_cols=61 Identities=25% Similarity=0.264 Sum_probs=26.6
Q ss_pred cccccEEEccCCcccccCc--ccccccccccceecccccccCcC--CCccCCCCcccEEEcCCccc
Q 047790 380 AVALEKLDLSSNMLTRQIP--KKIGNLTNIQILKLNSNFFDGII--PMEFGDCISLNTLDLGSNNL 441 (885)
Q Consensus 380 l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l 441 (885)
+.+|++..|.+..+. ..+ .....+++++.||||.|-|.... -.....+++|+.|+|+.|++
T Consensus 120 ~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl 184 (505)
T KOG3207|consen 120 LKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRL 184 (505)
T ss_pred HHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccc
Confidence 334444444444443 111 13334455555555555444221 12233445555555555554
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.2e-11 Score=114.79 Aligned_cols=18 Identities=28% Similarity=0.288 Sum_probs=6.3
Q ss_pred ccCcccccccccccccCC
Q 047790 566 LGNLVQLEYLDFSMNMLD 583 (885)
Q Consensus 566 ~~~l~~L~~L~Ls~N~l~ 583 (885)
+..+++|++|+|.+|.++
T Consensus 109 L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 109 LSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp GGG-TT--EEE-TT-GGG
T ss_pred HHcCCCcceeeccCCccc
Confidence 334455555555555554
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.10 E-value=9.8e-10 Score=103.13 Aligned_cols=131 Identities=24% Similarity=0.267 Sum_probs=102.0
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEe-cccc--cc-----cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKL-SQAT--GQ-----CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~-~~~~--~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+++|+=+.+|.+.+.+.. +++|.- ++.. +. ...+..+|++++.+++.-.|...+-++.+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 45789999999999775444 555543 3322 11 124677899999999877777777777777888999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
++|..+.+.+... ...++..+-..+.-|| ..||+|||+.++||++...+ +.++|||++..
T Consensus 81 I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA--------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc--------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888754 1346667777888999 99999999999999998774 99999999864
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.6e-10 Score=130.54 Aligned_cols=147 Identities=16% Similarity=0.168 Sum_probs=94.2
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccc----------------------------------cH---
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ----------------------------------CD--- 701 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~----------------------------------~~--- 701 (885)
+..|.. +.+|+|++|.||+|+.++ |+.||+|+.+..... ..
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 344665 789999999999999888 999999998643200 00
Q ss_pred ---HHHHHHHHHhcccC----CCCccceeeeeE-eCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHH-HH
Q 047790 702 ---REFAAEMETLDMVK----HQNLVQLLGYCS-VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARG-IS 772 (885)
Q Consensus 702 ---~~~~~E~~~l~~l~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~-l~ 772 (885)
-++.+|++.+.+++ +...+.+-.++. .....++||||++|+.+.++-.-.....+... ++...+++ +.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~---la~~~v~~~~~ 274 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKL---LAERGVEVFFT 274 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHH---HHHHHHHHHHH
Confidence 12344554444443 222222222222 23557899999999999875321112222222 22222222 33
Q ss_pred HHhccCCCCceecCCCCCcEEEcCCC----cEEEeeccCcccccC
Q 047790 773 FLHHGFKPYIIHMDIKTSNILLNDYF----EAKVSDFGLARLISD 813 (885)
Q Consensus 773 ~LH~~~~~~i~H~dlkp~Nil~~~~~----~vkl~Dfg~a~~~~~ 813 (885)
.+. ..|++|+|+||.||+++.++ .++++|||.+..+..
T Consensus 275 Qif---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 275 QVF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 344 68999999999999999887 899999999877654
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.4e-11 Score=116.48 Aligned_cols=108 Identities=34% Similarity=0.471 Sum_probs=27.9
Q ss_pred CcCCCCEEeccCCcCCCCCCcccc-ccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCccc-CCCCCCc
Q 047790 110 NLKRLKMLSVGENQLSGSIPSQLG-LLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRL-GDLTQLQ 187 (885)
Q Consensus 110 ~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~ 187 (885)
+..++++|+|++|+|+. + +.++ .+++|+.|||++|.|+.. +.+..+++|+.|++++|+|+. +++.+ ..+++|+
T Consensus 17 n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQ 91 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--
T ss_pred ccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc-cccchHHhCCcCC
Confidence 33445555555555552 2 2333 355566666666665522 235555566666666666652 22222 2455666
Q ss_pred cccccccccCCCCCcccccccccccEEEeecccCc
Q 047790 188 DLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 188 ~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
+|+|++|+|...-....++.+++|++|++.+|.++
T Consensus 92 ~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 92 ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred EEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 66666666652111233555666666666666665
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.7e-09 Score=105.91 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=98.8
Q ss_pred cceecccCCceEEEEEeCC-------CCeEEEEEecccc----------ccc------------HHH----HHHHHHHhc
Q 047790 666 ENVIGGGGFRTAFKGTMPD-------QKTVAVKKLSQAT----------GQC------------DRE----FAAEMETLD 712 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~-------~~~valK~~~~~~----------~~~------------~~~----~~~E~~~l~ 712 (885)
...||.|-=+.||.|...+ +..+|+|+++... .++ ... ..+|.+.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4578899999999997653 4789999874211 000 112 237999999
Q ss_pred ccCC--CCccceeeeeEeCCeeEEEEecccCCCHHH-HHhhcCCCCCHHHHHHHHHHHHHHHHHH-hccCCCCceecCCC
Q 047790 713 MVKH--QNLVQLLGYCSVGEEKLLVYEYMVNGSLDD-WLRNRAASLDWGKRCKIAYGAARGISFL-HHGFKPYIIHMDIK 788 (885)
Q Consensus 713 ~l~~--~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~-~l~~~~~~~~~~~~~~i~~~l~~~l~~L-H~~~~~~i~H~dlk 788 (885)
++.. -.+++++++ ...++||||+.+..+.. .+.. ...+......+..+++.++..+ | +.|++|||++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDLs 152 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADLS 152 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 8874 456666654 45789999997654422 2221 2245556677889999999988 7 8999999999
Q ss_pred CCcEEEcCCCcEEEeeccCccccc
Q 047790 789 TSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 789 p~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
+.||++++ +.++++|||.+....
T Consensus 153 ~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 153 EYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred HHHEEEEC-CcEEEEECCCceeCC
Confidence 99999974 579999999886643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.9e-11 Score=135.80 Aligned_cols=106 Identities=34% Similarity=0.464 Sum_probs=54.8
Q ss_pred CcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccc
Q 047790 110 NLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDL 189 (885)
Q Consensus 110 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 189 (885)
.+..++.+++..|.+.. +-..+..+++|+.|++..|+|. .+...+..+++|++|++++|+|+... .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 34445555555555552 2333455555555555555555 22222455555666666666655332 24445556666
Q ss_pred cccccccCCCCCcccccccccccEEEeecccCc
Q 047790 190 DLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 190 ~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
++++|.|+ .++. +..++.|+.+++++|+++
T Consensus 146 ~l~~N~i~-~~~~--~~~l~~L~~l~l~~n~i~ 175 (414)
T KOG0531|consen 146 NLSGNLIS-DISG--LESLKSLKLLDLSYNRIV 175 (414)
T ss_pred eeccCcch-hccC--CccchhhhcccCCcchhh
Confidence 66666655 3332 344555666666666555
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.00 E-value=8.7e-11 Score=122.58 Aligned_cols=158 Identities=22% Similarity=0.154 Sum_probs=78.8
Q ss_pred CCCCcEEEecCCccccccc-ccccCCCCCcEEEccCCCCcCcc--cccccccCCcceeeccccccCCCCCcccCCC--Cc
Q 047790 261 CSMLKYISLSNNKLSGPIP-RELCNSGSLVEINLDGNMLSGTI--EDVFDRCTNLSELVLVNNRISGSIPEYISEL--PL 335 (885)
Q Consensus 261 l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~L 335 (885)
+.+|+.+.|.+.......- .....+++++.|||+.|-+.... ......+++|+.|+|+.|++.-...+..... .+
T Consensus 120 ~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~l 199 (505)
T KOG3207|consen 120 LKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHL 199 (505)
T ss_pred HHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhh
Confidence 4455555555555542111 24445666667777776665432 2344567888888888887764333322222 46
Q ss_pred eeEEeecCccccccCc-cccCccccceeecccccccCCCcccccccccccEEEccCCcccccC-cccccccccccceecc
Q 047790 336 KVFDLQYNNFTGVIPV-SLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQI-PKKIGNLTNIQILKLN 413 (885)
Q Consensus 336 ~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls 413 (885)
+.|.|+.|.++...-. ....+++|+.|++..|.....-......+..|+.|||++|++-... -...+.++.|..|+++
T Consensus 200 K~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls 279 (505)
T KOG3207|consen 200 KQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLS 279 (505)
T ss_pred heEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhcc
Confidence 7777777776632111 1223445555555555322222233333444555555555543211 0223444555555555
Q ss_pred ccccc
Q 047790 414 SNFFD 418 (885)
Q Consensus 414 ~N~l~ 418 (885)
.+.+.
T Consensus 280 ~tgi~ 284 (505)
T KOG3207|consen 280 STGIA 284 (505)
T ss_pred ccCcc
Confidence 55444
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.3e-09 Score=98.08 Aligned_cols=142 Identities=19% Similarity=0.189 Sum_probs=105.6
Q ss_pred ecceecccCCceEEEEEeCCCCeEEEEE-ecccc--cc-----cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 665 FENVIGGGGFRTAFKGTMPDQKTVAVKK-LSQAT--GQ-----CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 665 ~~~~lG~G~~g~vy~a~~~~~~~valK~-~~~~~--~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
....+-+|+-+.|+++.+. |+.+++|. +.+.. +. ...+..+|++.+.+++.-.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 3467788999999999874 45555553 33321 11 2357889999999988666666666777777778999
Q ss_pred ecccC-CCHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC---cEEEeeccCccc
Q 047790 737 EYMVN-GSLDDWLRNRAAS-LDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF---EAKVSDFGLARL 810 (885)
Q Consensus 737 e~~~~-~sL~~~l~~~~~~-~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~---~vkl~Dfg~a~~ 810 (885)
||++| .++.+++...... .+......++.++-+.+.-|| ..+|+|||+..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 4888887754332 333344789999999999999 99999999999999996443 358999999865
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.1e-11 Score=123.82 Aligned_cols=242 Identities=21% Similarity=0.270 Sum_probs=139.2
Q ss_pred cccccccCCCCCCEEecCCCcccCc----CCcCccCcCCCCEEeccCC---cCCCCCCccc-------cccccccEeeee
Q 047790 79 PVSPFLFNLSSLRILDLSKNLLFGQ----LSPQVSNLKRLKMLSVGEN---QLSGSIPSQL-------GLLTRLETISLR 144 (885)
Q Consensus 79 ~~~~~l~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~n---~l~~~~p~~~-------~~l~~L~~L~Ls 144 (885)
.+-+.+-.+.+++.++||+|.+... +.+.+.+.++|+.-++|+- ++...+|+.+ ...++|++||||
T Consensus 21 ~v~~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLS 100 (382)
T KOG1909|consen 21 DVEEELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLS 100 (382)
T ss_pred hHHHHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecc
Confidence 3444566677788888888877322 4445666777777777763 2223344433 334567777777
Q ss_pred ccCCCCCCCccc----cCCccCceEEccCCcCCccCCc-------------ccCCCCCCccccccccccCCCCCc----c
Q 047790 145 SNSFTGEMPSEL----GDIKQLKSLDFSGNGLNGTIPS-------------RLGDLTQLQDLDLSDNLLSGSLPV----S 203 (885)
Q Consensus 145 ~N~l~~~~p~~l----~~l~~L~~L~Ls~N~l~~~~p~-------------~~~~l~~L~~L~Ls~N~l~~~~p~----~ 203 (885)
.|.|....+..| ..+..|++|+|.+|.+.-..-. ....-++|+.+..++|++. .-+. .
T Consensus 101 DNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrle-n~ga~~~A~ 179 (382)
T KOG1909|consen 101 DNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLE-NGGATALAE 179 (382)
T ss_pred ccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccc-cccHHHHHH
Confidence 777664444433 3456677777777766511111 1222344555555555553 2221 1
Q ss_pred cccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccc----cc
Q 047790 204 LLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGP----IP 279 (885)
Q Consensus 204 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~----~p 279 (885)
.|+..+.|+.+.++.|.|. ..- ...+...+..++.|+.|||..|-++.. +.
T Consensus 180 ~~~~~~~leevr~~qN~I~------------------------~eG-~~al~eal~~~~~LevLdl~DNtft~egs~~La 234 (382)
T KOG1909|consen 180 AFQSHPTLEEVRLSQNGIR------------------------PEG-VTALAEALEHCPHLEVLDLRDNTFTLEGSVALA 234 (382)
T ss_pred HHHhccccceEEEeccccc------------------------Cch-hHHHHHHHHhCCcceeeecccchhhhHHHHHHH
Confidence 2334445555555555443 111 012234567788888888888887643 33
Q ss_pred ccccCCCCCcEEEccCCCCcCcccccc-----cccCCcceeeccccccCCCC----CcccCCC-CceeEEeecCccc
Q 047790 280 RELCNSGSLVEINLDGNMLSGTIEDVF-----DRCTNLSELVLVNNRISGSI----PEYISEL-PLKVFDLQYNNFT 346 (885)
Q Consensus 280 ~~l~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~~----p~~~~~~-~L~~L~Ls~N~l~ 346 (885)
..++.+++|+.|++++|.++..-..+| ...++|+.|.+.+|.|+..- ....... .|..|+|++|.+.
T Consensus 235 kaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 235 KALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 556667788888888888875443332 23578888888888886321 1112222 5888888888884
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.2e-09 Score=107.40 Aligned_cols=142 Identities=20% Similarity=0.252 Sum_probs=107.0
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCC--CccceeeeeEeC---CeeEEEEeccc
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQ--NLVQLLGYCSVG---EEKLLVYEYMV 740 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~--~i~~~~~~~~~~---~~~~lv~e~~~ 740 (885)
+.++.|..+.+|+++..+|+.+++|....... .....+..|.++++.+.+. .+.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56889999999999887778899998765332 1345788999999998763 456677766543 25689999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC------------------------------------------
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF------------------------------------------ 778 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~------------------------------------------ 778 (885)
|.++.+.... ...++.+...++.+++++++.+|...
T Consensus 84 G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 84 GRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred CEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 9887665431 23566677777888888888887321
Q ss_pred -----------CCCceecCCCCCcEEEcC--CCcEEEeeccCccc
Q 047790 779 -----------KPYIIHMDIKTSNILLND--YFEAKVSDFGLARL 810 (885)
Q Consensus 779 -----------~~~i~H~dlkp~Nil~~~--~~~vkl~Dfg~a~~ 810 (885)
...++|+|++|.||++++ ++.+.++||+.+..
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 66789999997754
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.7e-11 Score=123.06 Aligned_cols=229 Identities=22% Similarity=0.236 Sum_probs=126.1
Q ss_pred cCccccCCCCCcEEEecCCccccc----ccccccCCCCCcEEEccCCCCcC----cccc-------cccccCCcceeecc
Q 047790 254 ITPEIGNCSMLKYISLSNNKLSGP----IPRELCNSGSLVEINLDGNMLSG----TIED-------VFDRCTNLSELVLV 318 (885)
Q Consensus 254 ~~~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~----~~~~-------~~~~l~~L~~L~Ls 318 (885)
+-+.+..+.+++.++||+|.+... +...+...++|+..++++= ++| .+|+ ++..+++|++|+||
T Consensus 22 v~~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLS 100 (382)
T KOG1909|consen 22 VEEELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLS 100 (382)
T ss_pred HHHHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeecc
Confidence 334566678888899998888643 3344555667777777643 222 2222 23445667777777
Q ss_pred ccccCCCCCcccCCC-----CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcc
Q 047790 319 NNRISGSIPEYISEL-----PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNML 393 (885)
Q Consensus 319 ~N~l~~~~p~~~~~~-----~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 393 (885)
+|.+....+..+..+ +|+.|.|.+|.+.-.-...++ ..|.+|. .| .....-+.|+++...+|++
T Consensus 101 DNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~~-------kk~~~~~~Lrv~i~~rNrl 169 (382)
T KOG1909|consen 101 DNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--VN-------KKAASKPKLRVFICGRNRL 169 (382)
T ss_pred ccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--HH-------hccCCCcceEEEEeecccc
Confidence 777654444333221 355555555544311111110 0111111 11 1123445677777777777
Q ss_pred cccC----cccccccccccceecccccccCc----CCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhc
Q 047790 394 TRQI----PKKIGNLTNIQILKLNSNFFDGI----IPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSL 465 (885)
Q Consensus 394 ~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l 465 (885)
.... ...|...+.|+.+.++.|.|... .-..|..+++|+.|||.+|-|+-... -.+...+
T Consensus 170 en~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs------------~~LakaL 237 (382)
T KOG1909|consen 170 ENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGS------------VALAKAL 237 (382)
T ss_pred ccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHH------------HHHHHHh
Confidence 5432 23355567777788887776421 22356677777788877777752111 1344566
Q ss_pred ccCCCCCEEeccCccccCCCCCCc-----ccccccceeeeccccce
Q 047790 466 SRLTNLTTLNLFGNLLTGSIPPEF-----GDSLKVQGLYLGHNQLT 506 (885)
Q Consensus 466 ~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~ 506 (885)
+.+++|+.|+++++.++..=...| ...++|+.|.|.+|.++
T Consensus 238 ~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 238 SSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred cccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhH
Confidence 677777777777777763322222 12456677777777666
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.6e-09 Score=119.16 Aligned_cols=199 Identities=23% Similarity=0.233 Sum_probs=156.8
Q ss_pred eeEEeecceecc--cCCceEEEEEe---CCCCeEEEEEeccc--ccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCe
Q 047790 660 IAIIVFENVIGG--GGFRTAFKGTM---PDQKTVAVKKLSQA--TGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~--G~~g~vy~a~~---~~~~~valK~~~~~--~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~ 731 (885)
-.++.+.+.+|. |.+|.||.+.. .++..+|+|+-+.. .+....+=.+|+...+.+. |++.++.+..+...+.
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence 345677889999 99999999875 45778888874432 2233344456666666665 8999998888888899
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHH----HHHHHhccCCCCceecCCCCCcEEEcCC-CcEEEeecc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR----GISFLHHGFKPYIIHMDIKTSNILLNDY-FEAKVSDFG 806 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~----~l~~LH~~~~~~i~H~dlkp~Nil~~~~-~~vkl~Dfg 806 (885)
.++-+|++ +.++.++.......++....+....+... |+.++| ...++|-|+||+||+...+ ...+++|||
T Consensus 193 lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 193 LFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred ceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCcc
Confidence 99999998 57888888876666778888888888888 999999 9999999999999999988 889999999
Q ss_pred CcccccCCCCC----cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 807 LARLISDCESH----VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 807 ~a~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
....+++..-. ......+...|++||... ..++.+.|+|++|.+..+...+..++.
T Consensus 269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~ 328 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPS 328 (524)
T ss_pred eeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhccccc
Confidence 99888764311 112236778899999755 456778999999999999988776543
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.1e-09 Score=128.74 Aligned_cols=130 Identities=28% Similarity=0.386 Sum_probs=81.4
Q ss_pred CCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCc--CCCCCCccccccccccEeeeeccCCCCCCCccccCCccCce
Q 047790 87 LSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQ--LSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKS 164 (885)
Q Consensus 87 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~--l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 164 (885)
....+...+-+|.+.- ++.. ...++|+.|-+..|. +....++.|..++.|++|||++|.=-+.+|..++.|-+|++
T Consensus 522 ~~~~rr~s~~~~~~~~-~~~~-~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIEH-IAGS-SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hhheeEEEEeccchhh-ccCC-CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 3556666666666532 2222 223367777777775 44333344666777777777776655577777777777777
Q ss_pred EEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeeccc
Q 047790 165 LDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNL 220 (885)
Q Consensus 165 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~ 220 (885)
|+|++..++ .+|..+++|.+|.+|++..+.-...+ ..+...+++|++|.+..-.
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~-~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESI-PGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccc-cchhhhcccccEEEeeccc
Confidence 777777777 67777777777777777766654333 3445567777777766544
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.6e-09 Score=127.95 Aligned_cols=285 Identities=25% Similarity=0.287 Sum_probs=171.7
Q ss_pred ccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccC--CCCCCCccccCCccCceEEccCCcCCccCCcccCCCCC
Q 047790 108 VSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNS--FTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQ 185 (885)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~--l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 185 (885)
..+....+...+-+|.+. .++.... .++|++|-+..|. +....++.|..++.|+.|||++|.=-+.+|..+++|-+
T Consensus 519 ~~~~~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~ 596 (889)
T KOG4658|consen 519 VKSWNSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVH 596 (889)
T ss_pred ccchhheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhh
Confidence 444578889999999987 4555543 3489999999996 56455556888999999999998876799999999999
Q ss_pred CccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCc
Q 047790 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLK 265 (885)
Q Consensus 186 L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~ 265 (885)
||+|+|++..++ .+|.+ ++++.+|.+|++..+.-...+|.....|++|++|.+-.... ......-.++.++..|+
T Consensus 597 LryL~L~~t~I~-~LP~~-l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~---~~~~~~l~el~~Le~L~ 671 (889)
T KOG4658|consen 597 LRYLDLSDTGIS-HLPSG-LGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSAL---SNDKLLLKELENLEHLE 671 (889)
T ss_pred hhcccccCCCcc-ccchH-HHHHHhhheeccccccccccccchhhhcccccEEEeecccc---ccchhhHHhhhcccchh
Confidence 999999999998 99998 89999999999999887767777778899999998843221 11122233445566666
Q ss_pred EEEecCCcccccccccccCCCCCc----EEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEee
Q 047790 266 YISLSNNKLSGPIPRELCNSGSLV----EINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQ 341 (885)
Q Consensus 266 ~L~Ls~N~l~~~~p~~l~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls 341 (885)
.+....... .+-..+..+..|. .+.+..+... ..+..+..+.+|+.|.+.++.+......+.... ..++
T Consensus 672 ~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~--~~~~-- 744 (889)
T KOG4658|consen 672 NLSITISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESL--IVLL-- 744 (889)
T ss_pred hheeecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhccccccc--chhh--
Confidence 665543332 1111222222222 2222222211 223344556666666666666653322221111 0000
Q ss_pred cCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCc
Q 047790 342 YNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI 420 (885)
Q Consensus 342 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 420 (885)
.| +++..+...+..-- ..+...--.++|+.|++..+.....+.+....+..++.+-+..+.+.+.
T Consensus 745 ----------~f---~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 745 ----------CF---PNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred ----------hH---HHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 01 11111111111000 0111112345677777777766655555555566666555555555543
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.2e-09 Score=83.61 Aligned_cols=61 Identities=43% Similarity=0.575 Sum_probs=47.4
Q ss_pred ccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCccc
Q 047790 381 VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL 441 (885)
Q Consensus 381 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 441 (885)
++|++|++++|+++.+.+..|.++++|++|++++|+++.+.|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3577788888888777677778888888888888888877777788888888888887764
|
... |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.5e-08 Score=97.68 Aligned_cols=136 Identities=21% Similarity=0.183 Sum_probs=103.2
Q ss_pred EeecceecccCCceEEEEEeCCCCeEEEEEeccccc------------------c----cHHHHHHHHHHhcccCCC--C
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG------------------Q----CDREFAAEMETLDMVKHQ--N 718 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~------------------~----~~~~~~~E~~~l~~l~~~--~ 718 (885)
+.++..||.|-=+.||.|..++|.++|+|.-+...+ . ......+|.++|+.+... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 557889999999999999999999999997532110 0 112467899999998755 6
Q ss_pred ccceeeeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC
Q 047790 719 LVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798 (885)
Q Consensus 719 i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~ 798 (885)
|++.+++ +..++|||+++|-.|...- ++......++..+++.+.... ..||+|||+++-||+++++|
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~dg 239 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEecCC
Confidence 7777776 5568999999886664432 123334456666677777677 78999999999999999999
Q ss_pred cEEEeeccCcccc
Q 047790 799 EAKVSDFGLARLI 811 (885)
Q Consensus 799 ~vkl~Dfg~a~~~ 811 (885)
.+.++||.-+...
T Consensus 240 ~~~vIDwPQ~v~~ 252 (304)
T COG0478 240 DIVVIDWPQAVPI 252 (304)
T ss_pred CEEEEeCcccccC
Confidence 9999999876553
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.4e-09 Score=83.46 Aligned_cols=39 Identities=36% Similarity=0.632 Sum_probs=14.3
Q ss_pred ccCCccCceEEccCCcCCccCCcccCCCCCCcccccccc
Q 047790 156 LGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194 (885)
Q Consensus 156 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 194 (885)
|..+++|++|++++|+++...|.+|.++++|++|++++|
T Consensus 21 f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 21 FSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp TTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred HcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 333333333333333333333333333333333333333
|
... |
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.77 E-value=6.9e-09 Score=74.63 Aligned_cols=39 Identities=51% Similarity=1.088 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHHhCCC-C-CCCCCCCCC--CCCcccCCcccc
Q 047790 24 PKQERRSLVHFKNSLQN-P-QVLSGWNKT--TRHCHWFGVKCR 62 (885)
Q Consensus 24 ~~~~~~aLl~~k~~~~~-~-~~~~~w~~~--~~~c~w~gv~c~ 62 (885)
+++|++||++||+++.. + ..+.+|+.+ .+||+|.||+|+
T Consensus 1 ~~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 1 PNQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp -HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred CcHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 36899999999999985 4 689999876 799999999996
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.8e-08 Score=96.22 Aligned_cols=125 Identities=23% Similarity=0.242 Sum_probs=82.0
Q ss_pred eEEEEEeCCCCeEEEEEeccccc-------------c-------------cHHHHHHHHHHhcccCCC--CccceeeeeE
Q 047790 676 TAFKGTMPDQKTVAVKKLSQATG-------------Q-------------CDREFAAEMETLDMVKHQ--NLVQLLGYCS 727 (885)
Q Consensus 676 ~vy~a~~~~~~~valK~~~~~~~-------------~-------------~~~~~~~E~~~l~~l~~~--~i~~~~~~~~ 727 (885)
.||.|...++..+|+|+.+.... . ......+|.+.|+++..- ++++++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999988999999998753110 0 113467899999999865 566666552
Q ss_pred eCCeeEEEEeccc--CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH-HhccCCCCceecCCCCCcEEEcCCCcEEEee
Q 047790 728 VGEEKLLVYEYMV--NGSLDDWLRNRAASLDWGKRCKIAYGAARGISF-LHHGFKPYIIHMDIKTSNILLNDYFEAKVSD 804 (885)
Q Consensus 728 ~~~~~~lv~e~~~--~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~-LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~D 804 (885)
..++||||++ |..+..+.... ++......++.+++..+.. +| ..|++|||+.+.||+++++ .+.++|
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE--
T ss_pred ---CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEEe
Confidence 3579999998 54554433321 1123455677777774444 67 8999999999999999987 899999
Q ss_pred ccCcccc
Q 047790 805 FGLARLI 811 (885)
Q Consensus 805 fg~a~~~ 811 (885)
||.+...
T Consensus 150 f~qav~~ 156 (188)
T PF01163_consen 150 FGQAVDS 156 (188)
T ss_dssp GTTEEET
T ss_pred cCcceec
Confidence 9988654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.6e-07 Score=96.12 Aligned_cols=132 Identities=14% Similarity=0.096 Sum_probs=94.6
Q ss_pred ceEEEEEeCCCCeEEEEEeccccc-----------ccHHHHHHHHHHhcccCCCC--ccceeeeeEe-----CCeeEEEE
Q 047790 675 RTAFKGTMPDQKTVAVKKLSQATG-----------QCDREFAAEMETLDMVKHQN--LVQLLGYCSV-----GEEKLLVY 736 (885)
Q Consensus 675 g~vy~a~~~~~~~valK~~~~~~~-----------~~~~~~~~E~~~l~~l~~~~--i~~~~~~~~~-----~~~~~lv~ 736 (885)
..|+++.. +|+.|.+|....... .....+.+|.+.+.++...+ +++.+.+.+. ....++||
T Consensus 36 rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 36 RRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred ceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 33555544 556788886643221 11124778999998886443 4444555543 23468999
Q ss_pred ecccCC-CHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-------CCcEEEeeccC
Q 047790 737 EYMVNG-SLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-------YFEAKVSDFGL 807 (885)
Q Consensus 737 e~~~~~-sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-------~~~vkl~Dfg~ 807 (885)
|++++. ++.+++... ....+......++.+++..++.|| ..||+|+|+++.||+++. +..+.++||+.
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r 191 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHR 191 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCceEEEEECCc
Confidence 999875 899988531 233566777899999999999999 999999999999999975 46799999998
Q ss_pred ccc
Q 047790 808 ARL 810 (885)
Q Consensus 808 a~~ 810 (885)
+..
T Consensus 192 ~~~ 194 (268)
T PRK15123 192 AQI 194 (268)
T ss_pred ccc
Confidence 753
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.4e-08 Score=109.97 Aligned_cols=191 Identities=21% Similarity=0.219 Sum_probs=142.5
Q ss_pred EEeecceecccCCceEEEEEe--CCCCeEEEEEecccccccHHH--HHHHHHHhcccC-CCCccceeeeeEeCCeeEEEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTM--PDQKTVAVKKLSQATGQCDRE--FAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~--~~~~~valK~~~~~~~~~~~~--~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 736 (885)
+|.....||.|.|+.|+.... .++..|++|-..+.......+ -..|+.+...+. |.++++.+..+......|+--
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~ 345 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL 345 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCch
Confidence 466778899999999998753 357778888776544332222 334555555554 888888888777677778999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC-CcEEEeeccCcccccCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY-FEAKVSDFGLARLISDCE 815 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~-~~vkl~Dfg~a~~~~~~~ 815 (885)
||+++++....+. -...+++...+++..|++.++.++| +..++|+|+||.||++..+ +..++.|||....+.-
T Consensus 346 e~~~~~s~~l~~~-~~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~-- 419 (524)
T KOG0601|consen 346 EFCEGGSSSLRSV-TSQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF-- 419 (524)
T ss_pred hhhcCcchhhhhH-HHHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhccccccccccce--
Confidence 9999998877663 3344788889999999999999999 9999999999999999875 6779999998765321
Q ss_pred CCcccCCC-CCCcc-CCcccccCCCCCCcchhHHHHHHHHHHHhCCC
Q 047790 816 SHVSTDTA-DTIGY-VPSEYGQAGRANERGDIYSFGVILLELVTGKQ 860 (885)
Q Consensus 816 ~~~~~~~~-~~~~y-~aPE~~~~~~~~~~~DvwslGvvl~elltg~~ 860 (885)
...... .+..| .+|+......+..+.|+++||.-+++..+|..
T Consensus 420 --~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ 464 (524)
T KOG0601|consen 420 --SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSP 464 (524)
T ss_pred --ecccccccccccccchhhccccccccccccccccccccccccCcc
Confidence 111122 23344 35556666678889999999999999998864
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.60 E-value=2e-09 Score=118.72 Aligned_cols=189 Identities=24% Similarity=0.258 Sum_probs=85.3
Q ss_pred cccccccccccceecccccccCcCCCccCCC-CcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEec
Q 047790 398 PKKIGNLTNIQILKLNSNFFDGIIPMEFGDC-ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNL 476 (885)
Q Consensus 398 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~L 476 (885)
|-.+..+.+|++|.|.++.|+.. ..+..+ ..|+.|.. +|.+...-.+ +..+ -|.+-.++ .+..|...+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC-~~Sl~Al~~v----~asc--ggd~~ns~-~Wn~L~~a~f 171 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLIC-HNSLDALRHV----FASC--GGDISNSP-VWNKLATASF 171 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhh-hccHHHHHHH----HHHh--ccccccch-hhhhHhhhhc
Confidence 55677788889998888888641 111111 12333322 2332210000 0000 00000000 0223555566
Q ss_pred cCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeeccc
Q 047790 477 FGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSN 556 (885)
Q Consensus 477 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n 556 (885)
+.|.+. .+..++.-++.|+.|||++|+++. -..+..|+.|++|||+.|+|+.+..+...
T Consensus 172 syN~L~-~mD~SLqll~ale~LnLshNk~~~------------------v~~Lr~l~~LkhLDlsyN~L~~vp~l~~~-- 230 (1096)
T KOG1859|consen 172 SYNRLV-LMDESLQLLPALESLNLSHNKFTK------------------VDNLRRLPKLKHLDLSYNCLRHVPQLSMV-- 230 (1096)
T ss_pred chhhHH-hHHHHHHHHHHhhhhccchhhhhh------------------hHHHHhcccccccccccchhccccccchh--
Confidence 666665 455555555666666666666652 12455566666666666655543321111
Q ss_pred ccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCC--CCCCccccccccccccCCcccc
Q 047790 557 KFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGE--VPRSGICQNLSIISLTGNKDLC 631 (885)
Q Consensus 557 ~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~--~p~~~~~~~~~~~~~~~N~~~c 631 (885)
.+ +|..|.+++|.++.. ..+.+|.+|+.||+++|-|.+. ....+.+..+..+.++|||.-|
T Consensus 231 -----------gc-~L~~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 231 -----------GC-KLQLLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred -----------hh-hheeeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 11 244555555555421 1334455555555555554431 1112233344455555555433
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.2e-07 Score=95.87 Aligned_cols=150 Identities=23% Similarity=0.321 Sum_probs=114.9
Q ss_pred HhcccCCCCccceeeeeEeCC-----eeEEEEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCC
Q 047790 710 TLDMVKHQNLVQLLGYCSVGE-----EKLLVYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPY 781 (885)
Q Consensus 710 ~l~~l~~~~i~~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~ 781 (885)
-+-++-|.|+++++.|+.+.+ +..++.||+..|++.+++++ ....+....-.+|+.||+.|+.|||.+ +..
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCc
Confidence 345566999999999986543 46789999999999999985 334477788889999999999999954 788
Q ss_pred ceecCCCCCcEEEcCCCcEEEeeccCccccc----CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh
Q 047790 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLIS----DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT 857 (885)
Q Consensus 782 i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~----~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt 857 (885)
|+|+++.-+-|++..++-+|+.- +.-..+. ...........+.++|.+||.-.....+.++|||+||....+|..
T Consensus 199 iihgnlTc~tifiq~ngLIkig~-~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGS-VAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred cccCCcchhheeecCCceEEecc-cCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 99999999999999888777652 1111111 111111222346788999998888888899999999999999998
Q ss_pred CCCC
Q 047790 858 GKQP 861 (885)
Q Consensus 858 g~~P 861 (885)
+..-
T Consensus 278 lEiq 281 (458)
T KOG1266|consen 278 LEIQ 281 (458)
T ss_pred heec
Confidence 8764
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.9e-09 Score=92.33 Aligned_cols=116 Identities=25% Similarity=0.357 Sum_probs=73.9
Q ss_pred cccCCCCCEEeccCccccCCCCCCcccc-cccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCC
Q 047790 465 LSRLTNLTTLNLFGNLLTGSIPPEFGDS-LKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCN 543 (885)
Q Consensus 465 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 543 (885)
+.....|+..+|++|.+. ..|+.|... +.++.|+|++|+++ .+|.++..++.|+.|+++.|
T Consensus 49 l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-----------------dvPeE~Aam~aLr~lNl~~N 110 (177)
T KOG4579|consen 49 LSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-----------------DVPEELAAMPALRSLNLRFN 110 (177)
T ss_pred HhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-----------------hchHHHhhhHHhhhcccccC
Confidence 334455666677777777 455555433 36677777777776 45777777777777777766
Q ss_pred CCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC
Q 047790 544 ELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS 613 (885)
Q Consensus 544 ~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~ 613 (885)
.+. ..|+.+..|.+|-.||..+|.+. .||..+.--+.....++.++++.+..+..
T Consensus 111 ~l~--------------~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 111 PLN--------------AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKK 165 (177)
T ss_pred ccc--------------cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCccc
Confidence 665 55667777777788888877776 66665432233333455666666655543
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.2e-08 Score=115.84 Aligned_cols=208 Identities=19% Similarity=0.179 Sum_probs=143.7
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccc---ccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQA---TGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+..+.+.+-+-+|.++.++.++-.. +...+.|..... .....+....+-.+.-.-++|.+++....+......++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 34456677788889999988775322 322333332211 11112222222222222345667666666666678899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc--
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS-- 812 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~-- 812 (885)
+++|+.++++..-++..+. .+....+-....+..+.++|| ...+.|+|.+|++.+....+..++.|||.....+
T Consensus 882 ~~~~~~~~~~~Skl~~~~~-~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGC-LSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred hhHHhccCCchhhhhcCCC-cccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccccccccccc
Confidence 9999999999998886443 455555566667788999999 7779999999999999999999999998432221
Q ss_pred -------------------CCCC---------CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 813 -------------------DCES---------HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 813 -------------------~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.... .......+|+.|.+||...+.....++|.|+.|++++|.++|..||+.
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 0000 112223478999999999999999999999999999999999999987
Q ss_pred CCCCCC
Q 047790 865 EFEDKD 870 (885)
Q Consensus 865 ~~~~~~ 870 (885)
...+..
T Consensus 1038 ~tpq~~ 1043 (1205)
T KOG0606|consen 1038 ETPQQI 1043 (1205)
T ss_pred cchhhh
Confidence 665544
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.3e-06 Score=89.75 Aligned_cols=194 Identities=12% Similarity=0.126 Sum_probs=127.8
Q ss_pred EeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccc----eeee--eEeC-CeeEEE
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ----LLGY--CSVG-EEKLLV 735 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~----~~~~--~~~~-~~~~lv 735 (885)
+..++.||+|+-+.+|-.- +-...+.|++....+....+-..|+ ...-.||-+-. ..+. .... ..+.+.
T Consensus 13 i~~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~aqk~a~l--a~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 13 IPPGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQAQKVAEL--AATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred cCCCccccCCccceeeecc--hhhchhheeecCCCchHHHHHHHHh--ccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 4467889999999999642 1122345777665433222222222 12223443322 1111 1112 236688
Q ss_pred EecccCC-CHHHHHhh-----cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 736 YEYMVNG-SLDDWLRN-----RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 736 ~e~~~~~-sL~~~l~~-----~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
|+.+.|. -+.++... .....+|+-..+.+..++.+.+.|| ..|.+-||+.++|+++++++.|.++|=..-.
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEccccee
Confidence 8888764 23333321 2233788999999999999999999 9999999999999999999999999743211
Q ss_pred cccCCCCCcccCCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhC-CCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTG-KQPTGPE 865 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg-~~P~~~~ 865 (885)
. .. .........+...|.+||.-. +...+...|.|.+||++++++.| +.||.+.
T Consensus 166 i-~~-ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 166 I-NA-NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred e-cc-CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 1 11 122334456888999999644 34557789999999999998887 9999864
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.4e-06 Score=87.71 Aligned_cols=106 Identities=24% Similarity=0.260 Sum_probs=84.3
Q ss_pred HHHHHHHHHHhcccCCC--CccceeeeeEeCC----eeEEEEecccCC-CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Q 047790 701 DREFAAEMETLDMVKHQ--NLVQLLGYCSVGE----EKLLVYEYMVNG-SLDDWLRNRAASLDWGKRCKIAYGAARGISF 773 (885)
Q Consensus 701 ~~~~~~E~~~l~~l~~~--~i~~~~~~~~~~~----~~~lv~e~~~~~-sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~ 773 (885)
..+..+|.+.+..+... .+++.+++..... ..++|+|++++. +|.+++..... .+......++.+++..++.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAK 133 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHH
Confidence 34677888888877643 3556666665432 458999999874 89998885333 5667788999999999999
Q ss_pred HhccCCCCceecCCCCCcEEEcCCC---cEEEeeccCccc
Q 047790 774 LHHGFKPYIIHMDIKTSNILLNDYF---EAKVSDFGLARL 810 (885)
Q Consensus 774 LH~~~~~~i~H~dlkp~Nil~~~~~---~vkl~Dfg~a~~ 810 (885)
|| ..||+|+|+++.||+++.++ .+.++||+.++.
T Consensus 134 lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 134 LH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99 99999999999999999876 899999997765
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.41 E-value=6.6e-09 Score=114.78 Aligned_cols=103 Identities=25% Similarity=0.262 Sum_probs=51.8
Q ss_pred CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecc
Q 047790 334 PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLN 413 (885)
Q Consensus 334 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 413 (885)
.|.+.+.++|.++ .+..++.-++.++.|+|++|++.... .+..++.|+.|||++|.++.+.--...++. |+.|.++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 3555566666665 33344444455555555555554332 444555555555555555532222222222 5555555
Q ss_pred cccccCcCCCccCCCCcccEEEcCCcccC
Q 047790 414 SNFFDGIIPMEFGDCISLNTLDLGSNNLN 442 (885)
Q Consensus 414 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 442 (885)
+|.++.. ..+.++++|+.||++.|-|.
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~ 267 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLS 267 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhh
Confidence 5555532 33455555555555555543
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.2e-08 Score=88.30 Aligned_cols=136 Identities=24% Similarity=0.296 Sum_probs=88.3
Q ss_pred cccceecccccccCcCCCc---cCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhccc-CCCCCEEeccCccc
Q 047790 406 NIQILKLNSNFFDGIIPME---FGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSR-LTNLTTLNLFGNLL 481 (885)
Q Consensus 406 ~L~~L~Ls~N~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~-l~~L~~L~Ls~N~l 481 (885)
.+..+||+++++- .+++. +.....|...+|++|.|+ .+|..|.. .+.++.|+|++|+|
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-----------------~fp~kft~kf~t~t~lNl~~nei 89 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-----------------KFPKKFTIKFPTATTLNLANNEI 89 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-----------------hCCHHHhhccchhhhhhcchhhh
Confidence 4555666666654 23333 333345566677777775 55555543 45778888888888
Q ss_pred cCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccc
Q 047790 482 TGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGE 561 (885)
Q Consensus 482 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ 561 (885)
+ .+|.++..++.|+.|+++.|.+. ..|..|..|.+|-.||.-+|.+. +
T Consensus 90 s-dvPeE~Aam~aLr~lNl~~N~l~-----------------~~p~vi~~L~~l~~Lds~~na~~--------------e 137 (177)
T KOG4579|consen 90 S-DVPEELAAMPALRSLNLRFNPLN-----------------AEPRVIAPLIKLDMLDSPENARA--------------E 137 (177)
T ss_pred h-hchHHHhhhHHhhhcccccCccc-----------------cchHHHHHHHhHHHhcCCCCccc--------------c
Confidence 7 67777888888888888888876 44677777888888888877665 4
Q ss_pred cchhccCcccccccccccccCCCCCCcccc
Q 047790 562 IPPELGNLVQLEYLDFSMNMLDGHIPEKLC 591 (885)
Q Consensus 562 ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~ 591 (885)
||..+-.-...-..++.++.+.+.-|..+.
T Consensus 138 id~dl~~s~~~al~~lgnepl~~~~~~klq 167 (177)
T KOG4579|consen 138 IDVDLFYSSLPALIKLGNEPLGDETKKKLQ 167 (177)
T ss_pred CcHHHhccccHHHHHhcCCcccccCccccc
Confidence 454443333444455677777776665543
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=6.5e-06 Score=80.88 Aligned_cols=137 Identities=15% Similarity=0.115 Sum_probs=99.7
Q ss_pred ecccCCceEEEEEeCCCCeEEEEEecccc------cccHHHHHHHHHHhcccCCC--CccceeeeeEeC-----CeeEEE
Q 047790 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQAT------GQCDREFAAEMETLDMVKHQ--NLVQLLGYCSVG-----EEKLLV 735 (885)
Q Consensus 669 lG~G~~g~vy~a~~~~~~~valK~~~~~~------~~~~~~~~~E~~~l~~l~~~--~i~~~~~~~~~~-----~~~~lv 735 (885)
-|+||-+.|++....+. .+-+|.-.... +....-+.+|...++++..- .++++. ++... -..++|
T Consensus 26 ~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 35678888888765443 57777754111 33456789999999998732 255555 33211 235799
Q ss_pred EecccC-CCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc--EEEeeccCccc
Q 047790 736 YEYMVN-GSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE--AKVSDFGLARL 810 (885)
Q Consensus 736 ~e~~~~-~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~--vkl~Dfg~a~~ 810 (885)
+|-++| .+|.+++.... .+.+......+..+++.+++-|| +.|+.|+|+.+.||+++.++. |+++||..++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998854 58999886432 23577778899999999999999 999999999999999986566 99999987654
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.34 E-value=4.9e-06 Score=89.82 Aligned_cols=165 Identities=18% Similarity=0.239 Sum_probs=125.0
Q ss_pred ceEEEEE-eCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeE----eCCeeEEEEecccC-CCHHHHH
Q 047790 675 RTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCS----VGEEKLLVYEYMVN-GSLDDWL 748 (885)
Q Consensus 675 g~vy~a~-~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~----~~~~~~lv~e~~~~-~sL~~~l 748 (885)
...|++. ..||..|++|+++....+.......-+++++++.|+||+++-++|. .+...++|++|+++ ++|.+..
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 5678886 4589999999996544333334445578899999999999999886 34578999999976 4676643
Q ss_pred hh--------------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 749 RN--------------RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 749 ~~--------------~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
-. .....++..++.++.|+..||.++| +.|...+-+.+.+|+++.+.+++|...|....+..+
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 21 1233678999999999999999999 999999999999999999999999988876554332
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQ 860 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~ 860 (885)
. . |.+.. -.+-|.-.+|.++..+.||..
T Consensus 447 ~-------------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 447 P-------------T--EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred C-------------C--cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 1 0 01111 124699999999999999964
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.30 E-value=9.2e-06 Score=82.86 Aligned_cols=138 Identities=14% Similarity=0.118 Sum_probs=85.4
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCC--CccceeeeeEeCCeeEEEEecccCCC-
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQ--NLVQLLGYCSVGEEKLLVYEYMVNGS- 743 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~--~i~~~~~~~~~~~~~~lv~e~~~~~s- 743 (885)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..- .+.+++++....+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 46899999999984 35567888876533 345678999999988643 36777888877777889999998863
Q ss_pred HHHHHh--------------h-----cC---CCCCHHHH-HHHHHH----------HHHH-HHHHhc-cCCCCceecCCC
Q 047790 744 LDDWLR--------------N-----RA---ASLDWGKR-CKIAYG----------AARG-ISFLHH-GFKPYIIHMDIK 788 (885)
Q Consensus 744 L~~~l~--------------~-----~~---~~~~~~~~-~~i~~~----------l~~~-l~~LH~-~~~~~i~H~dlk 788 (885)
+..... . +. ........ ..+..+ +.+. .+++.. .....++|+|+.
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 211110 0 10 00111110 001000 0011 111110 113457899999
Q ss_pred CCcEEEcCCCcEEEeeccCccc
Q 047790 789 TSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 789 p~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
|.||++++++ +.++||+.+..
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCcEEEcCCC-cEEEechhcCc
Confidence 9999999887 99999997753
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 885 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 4e-46 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 1e-45 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 2e-43 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-19 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 2e-43 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 1e-19 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-34 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-34 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 6e-34 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-32 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 2e-30 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 2e-30 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 5e-23 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 2e-22 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 3e-21 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 3e-21 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 3e-21 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 3e-21 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 3e-21 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 3e-21 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 3e-21 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 4e-21 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 4e-21 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 4e-21 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 4e-21 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 4e-21 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-20 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 2e-20 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 2e-19 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 5e-19 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 6e-19 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 6e-19 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 7e-19 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 7e-19 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 8e-19 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 9e-19 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 1e-18 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 1e-18 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 1e-18 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 1e-18 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 2e-18 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 3e-18 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 3e-13 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 1e-07 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 3e-18 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 3e-18 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 3e-18 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 3e-18 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 3e-18 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 4e-18 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 4e-18 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 5e-18 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 5e-18 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 1e-17 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-17 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 2e-17 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 2e-17 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 2e-17 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-17 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-17 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 2e-17 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 2e-17 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 2e-17 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 2e-17 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-17 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-17 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 2e-17 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 3e-17 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 3e-17 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 3e-17 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 3e-17 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 3e-17 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 3e-17 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 3e-17 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 3e-17 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 3e-17 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 3e-17 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 3e-17 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-17 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 3e-17 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 3e-17 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 3e-17 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 3e-17 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 4e-17 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 4e-17 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 4e-17 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 4e-17 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 4e-17 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 4e-17 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 4e-17 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 4e-17 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 4e-17 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 4e-17 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 4e-17 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 5e-17 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 5e-17 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 5e-17 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 5e-17 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 5e-17 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 6e-17 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 7e-17 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-16 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-16 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-16 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 2e-16 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 2e-16 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 3e-16 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 3e-16 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-16 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-16 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 3e-16 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 3e-16 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 3e-16 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 3e-16 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 3e-16 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 3e-16 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-16 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 4e-16 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 8e-16 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 8e-16 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 9e-16 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 9e-16 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 1e-15 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 1e-15 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 1e-15 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 1e-15 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 1e-15 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 1e-15 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-15 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 1e-15 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 1e-15 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-15 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 1e-15 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 1e-15 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 1e-15 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-15 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 1e-15 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 1e-15 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 1e-15 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-15 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 1e-15 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 1e-15 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-15 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 2e-15 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 2e-15 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 2e-15 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 2e-15 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 2e-15 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-15 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 3e-15 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 3e-15 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 3e-15 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 3e-15 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 3e-15 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 3e-15 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 4e-15 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 5e-15 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 5e-15 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-15 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 6e-15 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 7e-15 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 7e-15 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 8e-15 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 8e-15 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 8e-15 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 9e-15 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 1e-14 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 1e-14 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 1e-14 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 1e-14 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 2e-14 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 2e-14 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 3e-14 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 5e-14 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 5e-14 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 5e-14 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 7e-14 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 7e-14 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 7e-14 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 8e-14 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 1e-13 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 1e-13 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 1e-13 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 1e-13 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 2e-13 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 2e-13 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 2e-13 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 3e-13 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 3e-13 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 4e-13 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 5e-13 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-13 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-13 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 6e-13 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 6e-13 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 6e-13 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 7e-13 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 7e-13 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-13 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-13 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 8e-13 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-12 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 1e-12 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 1e-12 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 2e-12 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 2e-12 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-12 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 2e-12 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 2e-12 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-12 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 2e-12 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 2e-12 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-12 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 5e-12 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-12 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 6e-12 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 6e-12 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 6e-12 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 6e-12 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 6e-12 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 7e-12 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 8e-12 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 8e-12 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 8e-12 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 1e-11 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-11 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-11 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 1e-11 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 1e-11 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-11 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 1e-11 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 2e-11 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 2e-11 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 2e-11 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 2e-11 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 2e-11 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 2e-11 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 2e-11 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 2e-11 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 2e-11 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 2e-11 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 2e-11 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 2e-11 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 2e-11 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 2e-11 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 3e-11 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 3e-11 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 3e-11 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 3e-11 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 4e-11 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 4e-11 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 4e-11 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 4e-11 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 4e-11 | ||
| 2qlu_A | 314 | Crystal Structure Of Activin Receptor Type Ii Kinas | 5e-11 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 5e-11 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 5e-11 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 5e-11 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 5e-11 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 5e-11 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 5e-11 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 5e-11 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 6e-11 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 6e-11 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 6e-11 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 6e-11 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 7e-11 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 7e-11 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 7e-11 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 7e-11 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 7e-11 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 8e-11 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 8e-11 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 8e-11 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 8e-11 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 8e-11 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 9e-11 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 9e-11 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 1e-10 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 1e-10 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 1e-10 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 1e-10 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 1e-10 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 1e-10 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 1e-10 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 1e-10 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 1e-10 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 1e-10 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 1e-10 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 2e-10 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 2e-10 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 2e-10 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 2e-10 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 2e-10 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 2e-10 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 2e-10 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 2e-10 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 2e-10 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 2e-10 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 2e-10 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-10 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 2e-10 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 2e-10 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 2e-10 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 2e-10 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 2e-10 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-10 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-10 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 2e-10 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 2e-10 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 2e-10 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 2e-10 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 2e-10 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 2e-10 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 2e-10 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 2e-10 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 2e-10 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 2e-10 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 2e-10 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 2e-10 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-10 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-10 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-10 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 3e-10 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 3e-10 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 3e-10 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 3e-10 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 3e-10 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 3e-10 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 3e-10 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 3e-10 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 3e-10 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 3e-10 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 3e-10 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 3e-10 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 4e-10 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 4e-10 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 4e-10 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 4e-10 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 4e-10 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 4e-10 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 4e-10 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 4e-10 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 4e-10 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 4e-10 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 4e-10 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 4e-10 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 4e-10 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 4e-10 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 5e-10 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 5e-10 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 5e-10 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 5e-10 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 5e-10 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 5e-10 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 5e-10 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 5e-10 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 5e-10 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 5e-10 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 5e-10 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 5e-10 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 5e-10 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 5e-10 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 5e-10 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 5e-10 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 5e-10 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 5e-10 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 5e-10 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 5e-10 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 5e-10 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 5e-10 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 5e-10 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 5e-10 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 5e-10 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 5e-10 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 5e-10 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 5e-10 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 5e-10 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 5e-10 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 5e-10 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 5e-10 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 5e-10 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 5e-10 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 5e-10 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 5e-10 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 5e-10 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 6e-10 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 6e-10 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 6e-10 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 6e-10 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 6e-10 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 6e-10 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 6e-10 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 6e-10 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 6e-10 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 7e-10 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 7e-10 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 7e-10 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 7e-10 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 8e-10 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 8e-10 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 8e-10 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 8e-10 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 8e-10 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 8e-10 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 8e-10 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 8e-10 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 9e-10 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 9e-10 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 9e-10 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 9e-10 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 9e-10 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 9e-10 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 9e-10 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 9e-10 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 9e-10 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 9e-10 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 9e-10 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 9e-10 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 9e-10 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 9e-10 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 9e-10 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-09 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 1e-09 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 1e-09 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 1e-09 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 1e-09 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 1e-09 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 2e-09 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 2e-09 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 2e-09 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 2e-09 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 2e-09 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 2e-09 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 2e-09 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 2e-09 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 2e-09 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 3e-09 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 3e-09 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 3e-09 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 3e-09 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 3e-09 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 3e-09 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 3e-09 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-09 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 3e-09 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 4e-09 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 4e-09 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 4e-09 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 4e-09 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 4e-09 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 4e-09 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 5e-09 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 5e-09 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 5e-09 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 5e-09 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 5e-09 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 5e-09 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 6e-09 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 6e-09 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 6e-09 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 7e-09 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 8e-09 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 8e-09 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 8e-09 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 9e-09 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 9e-09 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 1e-08 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 1e-08 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 1e-08 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 1e-08 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 2e-08 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 2e-08 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 2e-08 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 2e-08 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 2e-08 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 2e-08 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 2e-08 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-08 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 2e-08 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 2e-08 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 2e-08 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 2e-08 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 2e-08 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-08 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-08 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 2e-08 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 2e-08 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 2e-08 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 2e-08 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 2e-08 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 2e-08 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-08 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 3e-08 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-08 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 3e-08 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 3e-08 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 3e-08 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 3e-08 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 3e-08 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 4e-08 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 4e-08 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 4e-08 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 4e-08 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 4e-08 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 4e-08 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 4e-08 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 4e-08 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 4e-08 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 4e-08 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 5e-08 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 5e-08 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 6e-08 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 6e-08 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 6e-08 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 6e-08 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 7e-08 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 7e-08 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 7e-08 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 7e-08 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 7e-08 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-08 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 8e-08 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 8e-08 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 9e-08 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 9e-08 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 9e-08 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-07 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 1e-07 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 1e-07 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-07 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 1e-07 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 1e-07 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-07 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 1e-07 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 1e-07 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 1e-07 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 1e-07 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 1e-07 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 1e-07 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 1e-07 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-07 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 1e-07 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-07 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 2e-07 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 2e-07 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 2e-07 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-07 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 2e-07 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 2e-07 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 2e-07 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 2e-07 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 2e-07 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 2e-07 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 2e-07 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 2e-07 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 3e-07 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-07 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 3e-07 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 3e-07 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 3e-07 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-07 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 3e-07 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 3e-07 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 3e-07 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 3e-07 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 3e-07 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 3e-07 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 3e-07 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 3e-07 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 3e-07 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 3e-07 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 3e-07 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 3e-07 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 3e-07 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 4e-07 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-07 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 4e-07 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 4e-07 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 4e-07 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 4e-07 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 4e-07 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 4e-07 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 4e-07 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 4e-07 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 4e-07 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 4e-07 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 4e-07 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 4e-07 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 4e-07 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 4e-07 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 4e-07 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 4e-07 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 4e-07 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 4e-07 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 4e-07 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 4e-07 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 5e-07 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 5e-07 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 5e-07 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 5e-07 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 5e-07 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 5e-07 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 5e-07 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 5e-07 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 5e-07 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 6e-07 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 6e-07 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 6e-07 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 6e-07 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 6e-07 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 6e-07 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 6e-07 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 6e-07 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 6e-07 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 6e-07 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 6e-07 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 6e-07 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 6e-07 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 6e-07 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 7e-07 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 7e-07 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-07 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-07 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 7e-07 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 7e-07 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 7e-07 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 7e-07 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 7e-07 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 8e-07 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 8e-07 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 8e-07 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 8e-07 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 8e-07 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 8e-07 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 9e-07 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 9e-07 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 9e-07 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 1e-06 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 1e-06 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 1e-06 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 1e-06 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 1e-06 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 1e-06 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-06 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 1e-06 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 1e-06 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 1e-06 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 1e-06 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 1e-06 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 1e-06 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 1e-06 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-06 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 2e-06 | ||
| 4fl3_A | 635 | Structural And Biophysical Characterization Of The | 2e-06 | ||
| 3tub_A | 293 | Crystal Structure Of Syk Kinase Domain With 1-(5-(6 | 2e-06 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 2e-06 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 2e-06 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 2e-06 | ||
| 4fl2_A | 636 | Structural And Biophysical Characterization Of The | 2e-06 | ||
| 3emg_A | 291 | Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami | 2e-06 | ||
| 1xba_A | 291 | Crystal Structure Of Apo Syk Tyrosine Kinase Domain | 2e-06 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 2e-06 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-06 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 2e-06 | ||
| 4dfl_A | 274 | Crystal Structure Of Spleen Tyrosine Kinase Complex | 2e-06 | ||
| 3srv_B | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 2e-06 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 2e-06 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 2e-06 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 2e-06 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 2e-06 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 2e-06 | ||
| 4f4p_A | 273 | Syk In Complex With Ligand Lasw836 Length = 273 | 2e-06 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 2e-06 | ||
| 3vf8_A | 299 | Crystal Structure Of Spleen Tyrosine Kinase Syk Cat | 2e-06 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 2e-06 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 3e-06 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 3e-06 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 3e-06 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 3e-06 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 3e-06 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 3e-06 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 3e-06 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 4e-06 | ||
| 3srv_A | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 4e-06 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 4e-06 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 4e-06 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 5e-06 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 5e-06 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 5e-06 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 5e-06 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 5e-06 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 5e-06 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 5e-06 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 5e-06 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 6e-06 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 6e-06 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 6e-06 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 6e-06 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 6e-06 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 6e-06 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 7e-06 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 7e-06 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 7e-06 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 7e-06 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 7e-06 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 7e-06 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 8e-06 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 8e-06 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 8e-06 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 8e-06 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 9e-06 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 9e-06 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 9e-06 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 9e-06 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 9e-06 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 1e-05 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 1e-05 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 1e-05 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-05 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 1e-05 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 1e-05 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 1e-05 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 1e-05 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 1e-05 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 2e-05 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-05 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 2e-05 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-05 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 2e-05 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 2e-05 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 2e-05 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 2e-05 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 2e-05 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 2e-05 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 2e-05 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 2e-05 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 2e-05 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 2e-05 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 2e-05 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 2e-05 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 2e-05 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 2e-05 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 2e-05 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 2e-05 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 2e-05 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 2e-05 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 3e-05 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 3e-05 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 3e-05 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 3e-05 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 4e-05 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 4e-05 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 5e-05 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 6e-05 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 6e-05 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 7e-05 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 7e-05 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 7e-05 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 8e-05 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 8e-05 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 9e-05 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 1e-04 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 1e-04 | ||
| 3rfs_A | 272 | Design Of A Binding Scaffold Based On Variable Lymp | 1e-04 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 1e-04 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 1e-04 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 1e-04 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 1e-04 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 1e-04 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 1e-04 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 1e-04 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 1e-04 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 1e-04 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 1e-04 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 2e-04 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 2e-04 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 2e-04 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 2e-04 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 2e-04 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 2e-04 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 2e-04 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 2e-04 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 2e-04 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 2e-04 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 2e-04 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 2e-04 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 2e-04 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 2e-04 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 2e-04 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 2e-04 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 2e-04 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 2e-04 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 2e-04 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 2e-04 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 2e-04 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 2e-04 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-04 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 2e-04 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-04 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 2e-04 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 2e-04 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 2e-04 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-04 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-04 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 2e-04 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 2e-04 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 2e-04 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 2e-04 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 2e-04 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 2e-04 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 2e-04 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 3e-04 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 3e-04 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 3e-04 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 3e-04 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 3e-04 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 3e-04 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 3e-04 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 3e-04 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 3e-04 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 3e-04 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 3e-04 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 3e-04 | ||
| 2buj_A | 317 | Crystal Structure Of The Human Serine-Threonine Kin | 3e-04 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 3e-04 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-04 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 4e-04 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 4e-04 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 4e-04 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 4e-04 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 4e-04 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 5e-04 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 5e-04 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 5e-04 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 5e-04 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 5e-04 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 5e-04 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 5e-04 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 5e-04 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 5e-04 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 5e-04 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 5e-04 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 5e-04 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 5e-04 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 5e-04 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 6e-04 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 6e-04 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 6e-04 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 6e-04 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 6e-04 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 6e-04 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 6e-04 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 6e-04 | ||
| 2o6q_A | 270 | Structural Diversity Of The Hagfish Variable Lympho | 6e-04 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 6e-04 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 6e-04 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 6e-04 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 6e-04 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 7e-04 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 7e-04 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 7e-04 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 7e-04 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 7e-04 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 7e-04 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 7e-04 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 7e-04 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 7e-04 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 7e-04 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 7e-04 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 8e-04 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 8e-04 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 8e-04 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 8e-04 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 8e-04 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 8e-04 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 8e-04 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 9e-04 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635 | Back alignment and structure |
|
| >pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636 | Back alignment and structure |
|
| >pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291 | Back alignment and structure |
|
| >pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274 | Back alignment and structure |
|
| >pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte Receptors Of Jawless Vertebrates By Module Engineering Length = 272 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors A29 Length = 270 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 885 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-160 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-156 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-144 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 5e-72 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-30 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 1e-101 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 7e-90 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 9e-65 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 1e-33 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 1e-99 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-91 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-83 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-62 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-60 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-46 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 6e-37 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-13 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 1e-85 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 2e-84 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-76 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 5e-61 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 8e-37 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 6e-83 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 6e-80 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 3e-78 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-64 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-36 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 7e-79 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 8e-75 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 4e-68 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 6e-40 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 7e-77 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 2e-76 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 4e-68 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 3e-63 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 1e-48 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 3e-69 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 4e-60 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 3e-44 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-31 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 1e-22 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-15 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 1e-61 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 4e-57 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 1e-53 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-49 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 6e-53 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 3e-50 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 1e-44 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 6e-53 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-52 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-34 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-22 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 2e-52 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 2e-51 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 5e-49 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 7e-49 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 9e-49 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 1e-48 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-46 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 8e-45 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-44 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 4e-38 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 1e-48 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 2e-48 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 4e-45 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 2e-41 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 3e-35 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-28 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 2e-21 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 3e-48 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 6e-48 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 1e-47 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 1e-47 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 4e-40 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 1e-25 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-22 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 3e-47 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 4e-47 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 6e-47 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 2e-45 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 6e-45 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 2e-41 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 3e-36 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 6e-22 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 1e-20 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 7e-38 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 1e-37 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 2e-37 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 4e-36 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 4e-34 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 1e-33 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 7e-27 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 1e-37 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 1e-36 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 7e-36 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 1e-13 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 6e-04 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 3e-36 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 1e-24 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 3e-16 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 5e-16 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 3e-14 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 6e-36 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 9e-36 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 7e-35 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 3e-34 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 4e-25 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 9e-21 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 3e-13 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 3e-35 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 6e-34 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-33 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 3e-35 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-34 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 4e-33 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 8e-31 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 6e-35 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-34 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 2e-33 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 7e-31 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-18 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 1e-34 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 2e-34 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 2e-34 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 3e-34 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 5e-34 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-33 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-32 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 4e-29 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 7e-21 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 3e-18 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 8e-06 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 5e-34 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 6e-34 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 1e-33 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 2e-33 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 2e-33 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 2e-33 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 5e-33 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 6e-33 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 8e-33 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 8e-33 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 9e-33 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 5e-30 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-29 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 3e-29 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 2e-28 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 3e-22 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-09 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 1e-32 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 1e-32 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-32 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-25 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-22 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-18 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 4e-16 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 2e-32 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 3e-32 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 4e-32 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 5e-32 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 5e-32 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 9e-32 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-31 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-30 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 3e-26 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 6e-26 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-15 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 3e-31 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 4e-31 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 4e-31 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 5e-31 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 7e-31 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 1e-30 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 2e-30 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 2e-30 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 2e-30 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 4e-30 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 5e-30 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 8e-30 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 1e-29 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 2e-29 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 2e-29 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 2e-29 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 3e-29 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 4e-29 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 4e-29 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 5e-29 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 8e-29 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 1e-28 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 7e-23 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 8e-23 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 6e-22 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 1e-28 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 1e-28 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 3e-28 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 6e-28 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-26 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 1e-25 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 1e-21 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-11 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 6e-28 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 1e-27 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 2e-27 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 2e-27 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 7e-27 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 1e-26 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 1e-26 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 2e-26 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-26 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 8e-26 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 2e-25 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 9e-24 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 4e-22 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-19 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 2e-14 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 1e-25 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 9e-25 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 4e-23 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 6e-21 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 9e-20 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 9e-15 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-07 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 5e-25 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 6e-25 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 1e-24 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 3e-24 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 4e-21 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 3e-20 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 6e-20 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 1e-19 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 1e-18 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-17 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 1e-24 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 2e-24 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 1e-22 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 8e-22 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 3e-21 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 2e-20 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 5e-20 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 1e-17 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-24 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 9e-24 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-22 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 6e-21 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 9e-18 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 6e-06 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 3e-23 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 3e-23 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 3e-23 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 5e-23 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 9e-23 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 1e-22 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 1e-22 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 5e-21 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 4e-19 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 5e-19 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 1e-16 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 1e-22 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 1e-21 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 9e-20 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 8e-19 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 2e-18 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 7e-15 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 1e-22 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 3e-22 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 8e-22 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-21 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 9e-21 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 2e-20 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 2e-17 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-11 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-22 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-17 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 1e-16 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 8e-15 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 8e-13 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-08 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 4e-22 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 4e-22 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 4e-19 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 5e-18 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 3e-17 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 1e-16 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 3e-10 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 6e-22 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 6e-22 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 1e-21 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 3e-21 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 5e-21 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 6e-19 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 2e-16 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 2e-14 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 3e-14 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 7e-14 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 1e-12 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 5e-12 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 6e-04 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 5e-21 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 7e-21 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 7e-21 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 3e-16 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 8e-15 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 6e-13 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 4e-06 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 1e-20 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 3e-20 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 5e-20 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 5e-20 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 6e-20 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 7e-20 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 7e-20 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 8e-20 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 1e-19 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 2e-19 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 2e-19 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 4e-19 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 5e-19 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 5e-19 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 8e-19 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 9e-19 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 1e-18 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 2e-18 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 3e-18 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 3e-18 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 3e-18 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 4e-18 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 4e-18 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 5e-18 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 8e-18 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 9e-18 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-17 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-17 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-14 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-14 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-12 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 2e-17 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 2e-17 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 2e-17 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 3e-17 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 4e-17 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 4e-17 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 4e-17 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 1e-14 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 2e-14 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 3e-14 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 2e-10 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 3e-17 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 6e-17 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 1e-13 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 1e-12 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 2e-10 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 3e-04 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 7e-17 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 1e-16 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 4e-16 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 5e-16 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 9e-16 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 1e-15 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 1e-15 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 2e-15 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-15 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-11 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 1e-10 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 1e-09 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 1e-09 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-09 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 1e-08 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 2e-15 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 1e-14 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 1e-13 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 6e-13 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 3e-12 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 2e-15 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 2e-15 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 2e-15 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 3e-15 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 3e-15 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 2e-13 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 2e-12 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 3e-12 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 2e-10 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 3e-15 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 4e-15 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 6e-15 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 6e-11 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 1e-07 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 2e-07 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 3e-05 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 7e-15 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 1e-14 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 1e-14 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 1e-14 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 2e-14 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 2e-14 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 2e-14 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-14 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 1e-13 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 1e-13 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 7e-13 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-09 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 3e-09 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 3e-07 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 1e-04 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 4e-14 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 1e-13 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 3e-13 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 1e-12 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 5e-14 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 5e-14 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 5e-14 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 6e-14 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 6e-14 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 6e-14 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 7e-14 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 4e-11 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 7e-11 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 4e-09 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 1e-07 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 3e-07 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 6e-06 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 9e-14 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 1e-13 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 1e-13 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 1e-13 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 1e-13 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 1e-13 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 2e-13 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 2e-13 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 1e-11 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 1e-08 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 3e-08 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 2e-13 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 2e-13 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 3e-13 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 3e-13 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 4e-13 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 5e-13 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 9e-13 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 2e-08 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 4e-08 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 7e-07 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 3e-05 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 5e-04 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 9e-13 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 9e-13 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 2e-12 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 2e-12 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 2e-12 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 3e-12 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 3e-12 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 3e-11 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 4e-09 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 4e-09 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-08 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 3e-06 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 3e-12 | |
| 1uu3_A | 310 | HPDK1, 3-phosphoinositide dependent protein kinase | 3e-12 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 4e-12 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 4e-12 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 5e-12 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 1e-08 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 5e-12 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 5e-12 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 6e-12 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 7e-12 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 8e-12 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 9e-12 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 9e-12 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 1e-11 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-11 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 3e-08 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-07 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-07 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 5e-07 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 8e-06 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 1e-11 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 2e-11 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 2e-11 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 2e-11 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 3e-11 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 8e-07 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 3e-11 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 2e-09 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 8e-05 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 4e-11 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 7e-11 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 7e-11 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 9e-11 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 1e-10 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-10 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 3e-08 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 7e-05 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 3e-04 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 6e-04 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 2e-10 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 2e-10 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 2e-07 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 1e-05 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 2e-10 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 3e-10 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 4e-10 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 5e-10 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 6e-10 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 8e-10 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 1e-05 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 2e-04 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 2e-04 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 5e-04 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 7e-04 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 8e-10 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 1e-09 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 2e-09 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 1e-07 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 2e-05 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 2e-09 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 2e-09 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 3e-09 | |
| 3pvu_A | 695 | Beta-adrenergic receptor kinase 1; transferase, se | 4e-09 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 5e-09 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 5e-09 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 6e-09 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 6e-09 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 8e-09 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 1e-08 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 5e-07 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 1e-06 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 2e-06 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 8e-06 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 1e-08 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 2e-08 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 2e-08 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 3e-08 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 2e-05 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 6e-05 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 8e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 2e-08 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 8e-05 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 3e-08 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 3e-08 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 9e-08 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 1e-05 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-08 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 4e-07 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 4e-07 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 5e-07 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-06 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 6e-06 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-05 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-05 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-05 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 7e-05 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 3e-08 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 1e-04 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 4e-04 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 4e-08 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 7e-08 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 1e-07 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 2e-06 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 1e-07 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 5e-07 | |
| 3g51_A | 325 | Ribosomal protein S6 kinase alpha-3; N-terminal ki | 3e-07 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 3e-07 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 5e-07 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 5e-07 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 2e-06 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 2e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 4e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-04 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 4e-04 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 8e-04 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 8e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-05 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-05 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 8e-05 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-04 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-04 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-04 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 6e-06 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 6e-06 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 8e-06 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 1e-05 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 2e-05 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 3e-05 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 4e-05 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 7e-05 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 1e-04 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 1e-04 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 2e-04 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 4e-04 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 4e-04 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 5e-04 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 5e-04 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 6e-04 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 6e-04 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 485 bits (1250), Expect = e-160
Identities = 172/588 (29%), Positives = 251/588 (42%), Gaps = 44/588 (7%)
Query: 64 SRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQ 123
+ L I + G V + +L LD+S N + P + + L+ L + N+
Sbjct: 178 GELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGI-PFLGDCSALQHLDISGNK 234
Query: 124 LSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRL-GD 182
LSG + T L+ +++ SN F G +P +K L+ L + N G IP L G
Sbjct: 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGA 292
Query: 183 LTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE-IGNLKKLSDLYLG 241
L LDLS N G++P + L L +S+N SG +P + + ++ L L L
Sbjct: 293 CDTLTGLDLSGNHFYGAVPPFF-GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLS 351
Query: 242 IGPYQLSLFVGRITPEIGNCSM-LKYISLSNNKLSGPIPRELCNSG--SLVEINLDGNML 298
+ F G + + N S L + LS+N SGPI LC + +L E+ L N
Sbjct: 352 F-----NEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGF 406
Query: 299 SGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSE 357
+G I C+ L L L N +SG+IP + L L+ L N G IP L +
Sbjct: 407 TGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVK 466
Query: 358 NLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFF 417
L N L G + +SN L + LS+N LT +IPK IG L N+ ILKL++N F
Sbjct: 467 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 526
Query: 418 DGIIPMEFGDCISLNTLDLGSNNLNG----CVVVVYLLLNNNMLSGKIPGSLSRLTNLTT 473
G IP E GDC SL LDL +N NG + + N ++GK +
Sbjct: 527 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKE 586
Query: 474 LNLFGNL--LTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGY--------LSGNKLYG 523
+ GNL G + + G + +S N L G
Sbjct: 587 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSG 646
Query: 524 SVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLD 583
+P G++ L L+L N G IP E+G+L L LD S N LD
Sbjct: 647 YIPKEIGSMPYLFILNLGHN-------------DISGSIPDEVGDLRGLNILDLSSNKLD 693
Query: 584 GHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLC 631
G IP+ + +L L ++L++N L G +P G + N LC
Sbjct: 694 GRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLC 741
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 475 bits (1225), Expect = e-156
Identities = 171/637 (26%), Positives = 270/637 (42%), Gaps = 63/637 (9%)
Query: 26 QERRSLVHFKNSLQNPQVLSGWNKTTRHCHWFGVKCRHSRVVSLVIQTQSLK---GPVSP 82
+E L+ FK+ L + +L W+ C + GV CR +V S+ + ++ L VS
Sbjct: 12 REIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSS 71
Query: 83 FLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPS--QLGLLTRLET 140
L +L+ L L LS + + G + L L + N LSG + + LG + L+
Sbjct: 72 SLLSLTGLESLFLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKF 130
Query: 141 ISLRSNSFTGEMP-SELGDIKQLKSLDFSGNGLNGTIPS---RLGDLTQLQDLDLSDNLL 196
+++ SN+ S + L+ LD S N ++G +L+ L +S N +
Sbjct: 131 LNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKI 190
Query: 197 SGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITP 256
SG + VS +L +LDVS+N S I P +G+ L L + + G +
Sbjct: 191 SGDVDVS---RCVNLEFLDVSSNNFSTGI-PFLGDCSALQHLDISG-----NKLSGDFSR 241
Query: 257 EIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTI-EDVFDRCTNLSEL 315
I C+ LK +++S+N+ GPIP SL ++L N +G I + + C L+ L
Sbjct: 242 AISTCTELKLLNISSNQFVGPIPPLPLK--SLQYLSLAENKFTGEIPDFLSGACDTLTGL 299
Query: 316 VLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPV-SLWNSENLMEFNAASNLLEGSL 373
L N G++P + L+ L NNF+G +P+ +L L + + N G L
Sbjct: 300 DLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGEL 359
Query: 374 SWEISNAVA-LEKLDLSSNMLTRQIPKKIGN--LTNIQILKLNSNFFDGIIPMEFGDCIS 430
++N A L LDLSSN + I + +Q L L +N F G IP +C
Sbjct: 360 PESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSE 419
Query: 431 LNTLDLGSNNLNG--------CVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT 482
L +L L N L+G + L L NML G+IP L + L TL L N LT
Sbjct: 420 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 479
Query: 483 GSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG--------YLSGNKLYGSVPTSFGNLNG 534
G IP + + + L +N+LTG IP+ +G LS N G++P G+
Sbjct: 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539
Query: 535 LTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLP 594
L LDL+ +N F G IP + + N + G + +
Sbjct: 540 LIWLDLN-------------TNLFNGTIPAAMFKQS----GKIAANFIAGKRYVYIKNDG 582
Query: 595 YLLYLNLADN--RLEGEVPRS-GICQNLSIISLTGNK 628
+ A N +G + ++T
Sbjct: 583 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 619
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 445 bits (1147), Expect = e-144
Identities = 173/582 (29%), Positives = 255/582 (43%), Gaps = 68/582 (11%)
Query: 81 SPFLFNLSSLRILDLSKNLLFGQLSPQV---SNLKRLKMLSVGENQLSGSIPSQLGLLTR 137
L+SL +LDLS N + G LK L++ N++SG + +
Sbjct: 144 VSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVN 201
Query: 138 LETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLS 197
LE + + SN+F+ +P LGD L+ LD SGN L+G + T+L+ L++S N
Sbjct: 202 LEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFV 260
Query: 198 GSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPE 257
G +P LK+LQ YL ++ N +G IP +
Sbjct: 261 GPIPPLPLKSLQ---YLSLAENKFTGEIPDFLS--------------------------- 290
Query: 258 IGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTI-EDVFDRCTNLSELV 316
G C L + LS N G +P + L + L N SG + D + L L
Sbjct: 291 -GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLD 349
Query: 317 LVNNRISGSIPEYISELP--LKVFDLQYNNFTGVIPVSLWNS--ENLMEFNAASNLLEGS 372
L N SG +PE ++ L L DL NNF+G I +L + L E +N G
Sbjct: 350 LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 409
Query: 373 LSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLN 432
+ +SN L L LS N L+ IP +G+L+ ++ LKL N +G IP E +L
Sbjct: 410 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 469
Query: 433 TLDLGSNNLNG--------CVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS 484
TL L N+L G C + ++ L+NN L+G+IP + RL NL L L N +G+
Sbjct: 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Query: 485 IPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL----SGNKLYGSVPTSFGNLNGLTHLDL 540
IP E GD + L L N G+IP ++ + N + G N
Sbjct: 530 IPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHG 589
Query: 541 SCN-------------ELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIP 587
+ N L + S + G P N + +LD S NML G+IP
Sbjct: 590 AGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP 649
Query: 588 EKLCSLPYLLYLNLADNRLEGEVPRS-GICQNLSIISLTGNK 628
+++ S+PYL LNL N + G +P G + L+I+ L+ NK
Sbjct: 650 KEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 251 bits (644), Expect = 5e-72
Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 9/314 (2%)
Query: 61 CRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVG 120
S +VSL + L G + L +LS LR L L N+L G++ ++ +K L+ L +
Sbjct: 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474
Query: 121 ENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRL 180
N L+G IPS L T L ISL +N TGE+P +G ++ L L S N +G IP+ L
Sbjct: 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Query: 181 GDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL 240
GD L LDL+ NL +G++P ++ K ++ N ++G I N + +
Sbjct: 535 GDCRSLIWLDLNTNLFNGTIPAAMFKQS-----GKIAANFIAGKRYVYIKNDGMKKECHG 589
Query: 241 GIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSG 300
+ G + ++ S ++++ G N+GS++ +++ NMLSG
Sbjct: 590 AGNLLEFQ---GIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSG 646
Query: 301 TIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENL 359
I L L L +N ISGSIP+ + +L L + DL N G IP ++ L
Sbjct: 647 YIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 706
Query: 360 MEFNAASNLLEGSL 373
E + ++N L G +
Sbjct: 707 TEIDLSNNNLSGPI 720
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 1e-30
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Query: 61 CRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVG 120
+ +G S L LS+ +++ + G SP N + L +
Sbjct: 581 DGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 640
Query: 121 ENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRL 180
N LSG IP ++G + L ++L N +G +P E+GD++ L LD S N L+G IP +
Sbjct: 641 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM 700
Query: 181 GDLTQLQDLDLSDNLLSGSLPVS-LLKNLQSLSY 213
LT L ++DLS+N LSG +P + +
Sbjct: 701 SALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKF 734
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 327 bits (840), Expect = e-101
Identities = 87/616 (14%), Positives = 186/616 (30%), Gaps = 82/616 (13%)
Query: 35 KNSLQNPQVLSGWNKTTRHCHW---FGVKC-RHSRVVSLVIQTQSLKGPVSPFLFNLSSL 90
Q + WN W GV + RV L ++ G V + L+ L
Sbjct: 48 SQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107
Query: 91 RILDLSKNLLFGQ----LSPQVSNLKRLKMLSVGENQLSGSIPSQLGLL--TRLETISLR 144
+L L + +S + + + L +
Sbjct: 108 EVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCIN 167
Query: 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSL 204
S+ + + + N + + + LT+L+ + ++
Sbjct: 168 SDPQQKSIKKSSRITLKDTQIGQLSNNI-TFVSKAVMRLTKLRQFYMGNSPFVAENICEA 226
Query: 205 LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSML 264
++ Y + NLK L+D+ + Y + ++ + +
Sbjct: 227 W-ENENSEY-----AQQYKTEDLKWDNLKDLTDVEV----YNCPN-LTKLPTFLKALPEM 275
Query: 265 KYISLSNNKL--------SGPIPRELCNSGSLVEINLDGNML-SGTIEDVFDRCTNLSEL 315
+ I+++ N+ + + I + N L + +E + L L
Sbjct: 276 QLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGML 335
Query: 316 VLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEG-SLS 374
+ N++ G +P + SE+ L +L YN T + +E + + A N L+
Sbjct: 336 ECLYNQLEGKLPAFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNI 395
Query: 375 WEISNAVALEKLDLSSNMLT-------RQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGD 427
++ + + +D S N + + N+ + L++N F
Sbjct: 396 FDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFST 455
Query: 428 CISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPP 487
L++++L N L + N L + LT+++L N LT +
Sbjct: 456 GSPLSSINLMGNMLTE--------IPKNSLKD-ENENFKNTYLLTSIDLRFNKLT-KLSD 505
Query: 488 EFGDS--LKVQGLYLGHNQLTGSIPESLG--------------YLSGNKLYGSVPTSFGN 531
+F + + G+ L +N + P GN+ P
Sbjct: 506 DFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITL 564
Query: 532 LNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLC 591
LT L + N++ ++ ++ + LD N +C
Sbjct: 565 CPSLTQLQIGSNDIR--------------KVNEKI--TPNISVLDIKDNPNISIDLSYVC 608
Query: 592 SLPYLLYLNLADNRLE 607
L ++ +
Sbjct: 609 PYIEAGMYMLFYDKTQ 624
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 297 bits (762), Expect = 7e-90
Identities = 88/577 (15%), Positives = 176/577 (30%), Gaps = 74/577 (12%)
Query: 122 NQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNG----TIP 177
+ L R+ +SL +G +P +G + +L+ L +G P
Sbjct: 67 DMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGP 126
Query: 178 SRLGDLTQLQDLDLSDNLLSGSLPVSLLK-NLQSLSYLDVSNNLLSGNIPPEIGNLKKLS 236
+ + + + + L ++++ +I K +
Sbjct: 127 KGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186
Query: 237 DLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGN 296
+ LS + ++ + + L+ + N+ E + N +
Sbjct: 187 QIGQ------LSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWEN-----ENSEYA 235
Query: 297 MLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGV------- 348
T + +D +L+++ + N +P ++ LP +++ ++ N
Sbjct: 236 QQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDW 295
Query: 349 -IPVSLWNSENLMEFNAASN-LLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTN 406
E + N L + + L L+ N L G+
Sbjct: 296 QALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLE-GKLPAFGSEIK 354
Query: 407 IQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNG---------CVVVVYLLLNNNML 457
+ L L N I G + L N L V+ + + N +
Sbjct: 355 LASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEI 414
Query: 458 SG-------KIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIP 510
+ + + N++++NL N ++ F + + L N LT
Sbjct: 415 GSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPK 474
Query: 511 ESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGI------------VGLYVQSNKF 558
SL +F N LT +DL N+L + VG+ + N F
Sbjct: 475 NSL---------KDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSF 525
Query: 559 YGEIPPELGNLVQLEYL------DFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPR 612
+ P + N L+ D N PE + P L L + N + +V
Sbjct: 526 -SKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNE 583
Query: 613 SGICQNLSIISLTGNKDLCEKIMGSDCQILTFGKLAL 649
I N+S++ + N + C + G L
Sbjct: 584 K-ITPNISVLDIKDNP-NISIDLSYVCPYIEAGMYML 618
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 228 bits (583), Expect = 9e-65
Identities = 78/409 (19%), Positives = 150/409 (36%), Gaps = 43/409 (10%)
Query: 68 SLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQL--- 124
+ + NL L +++ +L + L +++++V N+
Sbjct: 229 NENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISG 288
Query: 125 -----SGSIPSQLGLLTRLETISLRSNSF-TGEMPSELGDIKQLKSLDFSGNGLNGTIPS 178
+ + +++ I + N+ T + + L +K+L L+ N L G +P+
Sbjct: 289 EQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPA 348
Query: 179 RLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPP--EIGNLKKLS 236
G +L L+L+ N ++ +P + + + L ++N L IP + ++ +S
Sbjct: 349 -FGSEIKLASLNLAYNQITE-IPANFCGFTEQVENLSFAHNKLKY-IPNIFDAKSVSVMS 405
Query: 237 DLYL------GIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVE 290
+ + + P + I+LSNN++S L
Sbjct: 406 AIDFSYNEIGSVDGKNFD----PLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSS 461
Query: 291 INLDGNMLSG-------TIEDVFDRCTNLSELVLVNNRISGSIPE-YISELP-LKVFDLQ 341
INL GNML+ + F L+ + L N+++ + + LP L DL
Sbjct: 462 INLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLS 521
Query: 342 YNNFTGVIPVSLWNSENLMEF------NAASNLLEGSLSWEISNAVALEKLDLSSNMLTR 395
YN+F+ P NS L F +A N I+ +L +L + SN +
Sbjct: 522 YNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR- 579
Query: 396 QIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGC 444
++ +KI NI +L + N I I L +
Sbjct: 580 KVNEKI--TPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQDI 626
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 1e-33
Identities = 42/308 (13%), Positives = 83/308 (26%), Gaps = 39/308 (12%)
Query: 359 LMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFD 418
L E A N S + A + +M Q + + + L L
Sbjct: 35 LKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGAS 94
Query: 419 GIIPMEFGDCISLNTLDLGSNNLNG------------CVVVVYLLLNNNMLSGKIPGSLS 466
G +P G L L LGS+ +
Sbjct: 95 GRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDP 154
Query: 467 RL--TNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG--------YL 516
R ++L + + SI +LK + N +T + +++ Y+
Sbjct: 155 REDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNIT-FVSKAVMRLTKLRQFYM 213
Query: 517 SGNKLYGSVPTSFGNL------NGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLV 570
+ DL + L + + V + ++P L L
Sbjct: 214 GNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALP 273
Query: 571 QLEYLDFSMNML--------DGHIPEKLCSLPYLLYLNLADNRL-EGEVPRS-GICQNLS 620
+++ ++ + N D + + + N L V S + L
Sbjct: 274 EMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLG 333
Query: 621 IISLTGNK 628
++ N+
Sbjct: 334 MLECLYNQ 341
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 312 bits (803), Expect = 1e-99
Identities = 96/224 (42%), Positives = 145/224 (64%), Gaps = 5/224 (2%)
Query: 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLG 724
+N++G GGF +KG + D VAVK+L + Q + +F E+E + M H+NL++L G
Sbjct: 35 KNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAAS---LDWGKRCKIAYGAARGISFLHHGFKPY 781
+C E+LLVY YM NGS+ LR R S LDW KR +IA G+ARG+++LH P
Sbjct: 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 154
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
IIH D+K +NILL++ FEA V DFGLA+L+ ++HV+T TIG++ EY G+++E
Sbjct: 155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 214
Query: 842 RGDIYSFGVILLELVTGKQPTGP-EFEDKDGGNLVDWVLLMMKK 884
+ D++ +GV+LLEL+TG++ + D L+DWV ++K+
Sbjct: 215 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 303 bits (777), Expect = 2e-91
Identities = 127/593 (21%), Positives = 206/593 (34%), Gaps = 79/593 (13%)
Query: 89 SLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSF 148
S + D S L Q+ + + +L++ NQL + ++L ++ + N+
Sbjct: 5 SHEVADCSHLKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI 61
Query: 149 TGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNL 208
+ P + LK L+ N L+ T L +L L N + + +
Sbjct: 62 SKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ-KIKNNPFVKQ 120
Query: 209 QSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL------GIGPYQLSLFVGRITPEIGNCS 262
++L LD+S+N LS L+ L +L L + +L +F S
Sbjct: 121 KNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIF---------ANS 171
Query: 263 MLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVF---DRCTNLSELVLVN 319
LK + LS+N++ P G L + L+ L ++ + T++ L L N
Sbjct: 172 SLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSN 231
Query: 320 NRISGSIPEYISELP---LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWE 376
+++S + L L + DL YNN V S L F N ++ S
Sbjct: 232 SQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHS 291
Query: 377 ISNAVALEKLDLSSNM---------LTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGD 427
+ + L+L + L + L ++ L + N GI F
Sbjct: 292 LHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTG 351
Query: 428 CISLNTLDLGSNNLNGCVV------------VVYLLLNNNMLSGKIPGSLSRLTNLTTLN 475
I+L L L ++ + + + L L N +S + S L +L L+
Sbjct: 352 LINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLD 411
Query: 476 LFGNLLTGSIPP-EFGDSLKVQGLYLGHNQLTGSIPESLG--------YLSGNKLYG--S 524
L N + + E+ + +YL +N+ S L L S
Sbjct: 412 LGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDS 471
Query: 525 VPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNML-- 582
P+ F L LT LDLS N + I L L +LE LD N L
Sbjct: 472 SPSPFQPLRNLTILDLSNNNIANI-------------NDDMLEGLEKLEILDLQHNNLAR 518
Query: 583 ------DGHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GICQNLSIISLTGNK 628
G L L +L LNL N + L II L N
Sbjct: 519 LWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNN 571
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 281 bits (722), Expect = 1e-83
Identities = 112/592 (18%), Positives = 201/592 (33%), Gaps = 89/592 (15%)
Query: 64 SRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQ 123
+ + L + + S++ + +L LDLS N L L+ L+ L + N+
Sbjct: 97 TNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNK 156
Query: 124 LSGSIPSQLGLL--TRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLG 181
+ +L + + L+ + L SN P I +L L + L ++ +L
Sbjct: 157 IQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLC 216
Query: 182 D---LTQLQDLDLSDNLLSGSLPVSLLKNLQ--SLSYLDVSNNLLSGNIPPEIGNLKKLS 236
T +++L LS++ LS + L+ +L+ LD+S N L+ L +L
Sbjct: 217 LELANTSIRNLSLSNSQLST-TSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLE 275
Query: 237 DLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNN---------KLSGPIPRELCNSGS 287
+L + + + + ++Y++L + L
Sbjct: 276 YFFL-----EYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKC 330
Query: 288 LVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPE-----YISELPLKVFDLQY 342
L +N++ N + G ++F NL L L N+ S ++ PL + +L
Sbjct: 331 LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTK 390
Query: 343 NNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKK-I 401
N + + + + LE LDL N + +++ +
Sbjct: 391 NKISKIESDAFSWLGH------------------------LEVLDLGLNEIGQELTGQEW 426
Query: 402 GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKI 461
L NI + L+ N + + F SL L L L
Sbjct: 427 RGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNV--------------DSS 472
Query: 462 PGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKL 521
P L NLT L+L N + K++ L L HN L L +
Sbjct: 473 PSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA--------RLWKHAN 524
Query: 522 YGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNM 581
G L+ L L+L N D I +L +L+ +D +N
Sbjct: 525 PGGPIYFLKGLSHLHILNLESNGFDEI-------------PVEVFKDLFELKIIDLGLNN 571
Query: 582 LDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS--GICQNLSIISLTGNKDLC 631
L+ + L LNL N + + +NL+ + + N C
Sbjct: 572 LNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDC 623
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 2e-62
Identities = 85/447 (19%), Positives = 150/447 (33%), Gaps = 71/447 (15%)
Query: 184 TQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIG 243
+ D S L+ +P L N+ L++++N L +L+ L
Sbjct: 4 VSHEVADCSHLKLT-QVPDDLPTNIT---VLNLTHNQLRRLPAANFTRYSQLTSLD---- 55
Query: 244 PYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE 303
+ N +S P L +NL N LS +
Sbjct: 56 -------------------------VGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSD 90
Query: 304 DVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEF 362
F CTNL+EL L++N I + L DL +N + + ENL E
Sbjct: 91 KTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQEL 150
Query: 363 NAASNLLEGSLSWEISNA--VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI 420
++N ++ S E+ +L+KL+LSSN + P + + L LN+
Sbjct: 151 LLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPS 210
Query: 421 IPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLS--RLTNLTTLNLFG 478
+ + ++ ++ L L+N+ LS + + TNLT L+L
Sbjct: 211 LTEKLCLELANTSI-------------RNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSY 257
Query: 479 NLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHL 538
N L F +++ +L +N + S L + +L
Sbjct: 258 NNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSH----------------SLHGLFNVRYL 301
Query: 539 DLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLY 598
+L + + L LE+L+ N + G L L Y
Sbjct: 302 NLKRSFTK----QSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKY 357
Query: 599 LNLADNRLEGEVPRSGICQNLSIISLT 625
L+L+++ + +L+ L
Sbjct: 358 LSLSNSFTSLRTLTNETFVSLAHSPLH 384
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 217 bits (555), Expect = 2e-60
Identities = 87/471 (18%), Positives = 160/471 (33%), Gaps = 58/471 (12%)
Query: 37 SLQNPQVLS-GWNK-TTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNL--SSLRI 92
++ L + ++ ++ + +L + L + L ++L +
Sbjct: 193 AIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTM 252
Query: 93 LDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSN------ 146
LDLS N L + + L +L+ + N + L L + ++L+ +
Sbjct: 253 LDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI 312
Query: 147 ---SFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLS-GSLPV 202
S +K L+ L+ N + G + L L+ L LS++ S +L
Sbjct: 313 SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTN 372
Query: 203 SLLKNLQ--SLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITP-EIG 259
+L L L+++ N +S L L L L L+ +T E
Sbjct: 373 ETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDL-----GLNEIGQELTGQEWR 427
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSG--TIEDVFDRCTNLSELVL 317
+ I LS NK SL + L L + F NL+ L L
Sbjct: 428 GLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDL 487
Query: 318 VNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWE 376
NN I+ + + L L++ DLQ+NN + + G +
Sbjct: 488 SNNNIANINDDMLEGLEKLEILDLQHNNLARLWK----------------HANPGGPIYF 531
Query: 377 ISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDL 436
+ L L+L SN + +L ++I+ L N + + F + +SL +L+
Sbjct: 532 LKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLN- 590
Query: 437 GSNNLNGCVVVVYLLLNNNMLSGKIPGSLSR-LTNLTTLNLFGNLLTGSIP 486
L N+++ NLT L++ N +
Sbjct: 591 ---------------LQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 1e-46
Identities = 61/291 (20%), Positives = 105/291 (36%), Gaps = 11/291 (3%)
Query: 75 SLKGPVSPFLFNLSSLRILDLSKNLL-FGQLSPQV---SNLKRLKMLSVGENQLSGSIPS 130
+ G S L +L+ L LS + L+ + L +L++ +N++S
Sbjct: 340 DIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESD 399
Query: 131 QLGLLTRLETISLRSNSFTGEMP-SELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDL 189
L LE + L N E+ E ++ + + S N + + LQ L
Sbjct: 400 AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRL 459
Query: 190 DLSDNLLSG-SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLG---IGPY 245
L L S + L++L+ LD+SNN ++ + L+KL L L +
Sbjct: 460 MLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARL 519
Query: 246 QLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDV 305
G + S L ++L +N + L I+L N L+ V
Sbjct: 520 WKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASV 579
Query: 306 FDRCTNLSELVLVNNRISGSIPEYISELP--LKVFDLQYNNFTGVIPVSLW 354
F+ +L L L N I+ + L D+++N F W
Sbjct: 580 FNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAW 630
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 6e-37
Identities = 61/275 (22%), Positives = 97/275 (35%), Gaps = 46/275 (16%)
Query: 381 VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNN 440
V+ E D S LT Q+P + TNI +L L N + F L +LD+G N
Sbjct: 4 VSHEVADCSHLKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNT 60
Query: 441 LNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYL 500
+S P +L L LNL N L+ F + L+L
Sbjct: 61 ----------------ISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104
Query: 501 GHNQLTGSIPESLG--------YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVG-- 550
N + LS N L + + L L L LS N++ +
Sbjct: 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEE 164
Query: 551 -----------LYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLC---SLPYL 596
L + SN+ P + +L L + L + EKLC + +
Sbjct: 165 LDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSI 224
Query: 597 LYLNLADNRLEGEVPRSG---ICQNLSIISLTGNK 628
L+L++++L + NL+++ L+ N
Sbjct: 225 RNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNN 259
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 1e-13
Identities = 36/155 (23%), Positives = 59/155 (38%), Gaps = 11/155 (7%)
Query: 71 IQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIP 129
+ + G FL LS L IL+L N + +V +L LK++ +G N L+
Sbjct: 519 LWKHANPGGPIYFLKGLSHLHILNLESNGFDE-IPVEVFKDLFELKIIDLGLNNLNTLPA 577
Query: 130 SQLGLLTRLETISLRSNSFTGEMPSELGDI-KQLKSLDFSGNGLNGTIPSRLG-----DL 183
S L++++L+ N T G + L LD N + T S +
Sbjct: 578 SVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINE 637
Query: 184 TQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSN 218
T +LS + L + P + D S+
Sbjct: 638 THTNIPELSSHYLCNT-PPHYHG--FPVRLFDTSS 669
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 275 bits (706), Expect = 1e-85
Identities = 79/223 (35%), Positives = 126/223 (56%), Gaps = 8/223 (3%)
Query: 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGY 725
+ +IG G F +KG + D VA+K+ + + Q EF E+ETL +H +LV L+G+
Sbjct: 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF 103
Query: 726 CSVGEEKLLVYEYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
C E +L+Y+YM NG+L L S+ W +R +I GAARG+ +LH I
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAI 160
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDC-ESHVSTDTADTIGYVPSEYGQAGRANE 841
IH D+K+ NILL++ F K++DFG+++ ++ ++H+ST T+GY+ EY GR E
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTE 220
Query: 842 RGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMKK 884
+ D+YSFGV+L E++ + + NL +W +
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLPREM-VNLAEWAVESHNN 262
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 281 bits (722), Expect = 2e-84
Identities = 103/569 (18%), Positives = 183/569 (32%), Gaps = 70/569 (12%)
Query: 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNS 147
S + LDLS N L S + L++L + ++ L+ L T+ L N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 148 FTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKN 207
+ L+ L L +G L L++L+++ NL+ N
Sbjct: 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN 147
Query: 208 LQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT---PEIGNCSML 264
L +L +LD+S+N + ++ L ++ L L L L + + P L
Sbjct: 148 LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL-----SLDLSLNPMNFIQPGAFKEIRL 202
Query: 265 KYISLSNNKLSGPIPRELCNS-GSLVEINLDGNMLSGTI---EDVFDRCTNLSELVLVNN 320
++L NN S + + L L + L L +
Sbjct: 203 HKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEF 262
Query: 321 RIS------GSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSL 373
R++ I + + L + F L V S + +
Sbjct: 263 RLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFS--YNFGWQHLELVNCKFGQFP 320
Query: 374 SWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNF--FDGIIPMEFGDCISL 431
+ ++ + L++L +SN +L +++ L L+ N F G SL
Sbjct: 321 TLKLKS---LKRLTFTSNKGGNAFS--EVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSL 375
Query: 432 NTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGD 491
LDL N + + + L L L+ + L
Sbjct: 376 KYLDLSFNGVIT-----------------MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFL 418
Query: 492 SLK-VQGLYLGHNQLTGSIPESLG--------YLSGNKLYGSV-PTSFGNLNGLTHLDLS 541
SL+ + L + H + ++GN + P F L LT LDLS
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 542 CNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNL 601
+L+ + P +L L+ L+ S N L L L+
Sbjct: 479 QCQLEQL-------------SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 525
Query: 602 ADNRLEGEVPRS--GICQNLSIISLTGNK 628
+ N + + +L+ ++LT N
Sbjct: 526 SLNHIMTSKKQELQHFPSSLAFLNLTQND 554
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 260 bits (667), Expect = 1e-76
Identities = 100/542 (18%), Positives = 176/542 (32%), Gaps = 65/542 (11%)
Query: 68 SLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGS 127
L + ++ +LS L L L+ N + S L L+ L E L+
Sbjct: 56 VLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASL 115
Query: 128 IPSQLGLLTRLETISLRSNSFTG-EMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQL 186
+G L L+ +++ N ++P ++ L+ LD S N + + L L Q+
Sbjct: 116 ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
Query: 187 Q----DLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE-IGNLKKLSDLYLG 241
LDLS N ++ + K + L L + NN S N+ I L L L
Sbjct: 176 PLLNLSLDLSLNPMNF-IQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLV 233
Query: 242 IGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLS------GPIPRELCNSGSLVEINLDG 295
+G + + L +++ +L+ I ++ +L
Sbjct: 234 LG--EFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVS 291
Query: 296 NMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWN 355
+ + F L LVN + + L L + + G S +
Sbjct: 292 VTIERVKD--FSYNFGWQHLELVNCKFGQFPTLKLKSLK----RLTFTSNKGGNAFSEVD 345
Query: 356 SENLMEFNAASNLL--EGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLN 413
+L + + N L +G S +L+ LDLS N + + L ++ L
Sbjct: 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQ 404
Query: 414 SNFFDGIIPME-FGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLT 472
+ + F +L LD+ + G + L++L
Sbjct: 405 HSNLKQMSEFSVFLSLRNLIYLDISHTH----------------TRVAFNGIFNGLSSLE 448
Query: 473 TLNLFGNLLTGSIPPE-FGDSLKVQGLYLGHNQLTGSIPESLG--------YLSGNKLYG 523
L + GN + P+ F + + L L QL P + +S N +
Sbjct: 449 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 508
Query: 524 SVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLV-QLEYLDFSMNML 582
+ LN L LD S N EL + L +L+ + N
Sbjct: 509 LDTFPYKCLNSLQVLDYS-------------LNHIMTSKKQELQHFPSSLAFLNLTQNDF 555
Query: 583 DG 584
Sbjct: 556 AC 557
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 217 bits (554), Expect = 5e-61
Identities = 80/500 (16%), Positives = 160/500 (32%), Gaps = 72/500 (14%)
Query: 78 GPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKM----LSVGENQLSGSIPSQLG 133
+ + NL++L LDLS N + + L ++ + L + N ++ P
Sbjct: 139 FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK 198
Query: 134 LLTRLETISLRSNSFTGEMPSE-LGDIKQLKSLDFSGNGLNGT------IPSRLGDLTQL 186
+ RL ++LR+N + + + + L+ S L L L
Sbjct: 199 EI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 257
Query: 187 Q--DLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL---- 240
+ L+ + L L ++S + + + + L L
Sbjct: 258 TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER--VKDFSYNFGWQHLELVNCK 315
Query: 241 --GIGPY--------QLSLFVGRITPEIGNCSMLKYISLSNNKLS--GPIPRELCNSGSL 288
+ G + L+++ LS N LS G + + SL
Sbjct: 316 FGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSL 375
Query: 289 VEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYI-SELP-LKVFDLQYNNFT 346
++L N + T+ F L L ++ + + L L D+ + +
Sbjct: 376 KYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR 434
Query: 347 GVIPVSLWNSENLMEFNAASNLLEGSLSWEI-SNAVALEKLDLSSNMLTRQIPKKIGNLT 405
+L A N + + +I + L LDLS L + P +L+
Sbjct: 435 VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 494
Query: 406 NIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSL 465
++Q+L ++ N F + + SL LD N+ + L
Sbjct: 495 SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH----------------IMTSKKQEL 538
Query: 466 SRL-TNLTTLNLFGNLLTGSIPPE-FGDSLK-VQGLYLGHNQLTGSIPESLGYLSGNKLY 522
++L LNL N + + F +K + L + ++ + P +
Sbjct: 539 QHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMP----- 593
Query: 523 GSVPTSFGNLNGLTHLDLSC 542
+ L+++C
Sbjct: 594 ------------VLSLNITC 601
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 8e-37
Identities = 64/323 (19%), Positives = 98/323 (30%), Gaps = 35/323 (10%)
Query: 330 ISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLS 389
+ +P + NF IP +L + + + N L S+ + L+ LDLS
Sbjct: 4 VEVVPNITYQCMELNFYK-IPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLS 60
Query: 390 SNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVV-- 447
+ +L+++ L L N + F SL L NL
Sbjct: 61 RCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI 120
Query: 448 ------VYLLLNNNML-SGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGD----SLKVQ 496
L + +N++ S K+P S LTNL L+L N + + L
Sbjct: 121 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 180
Query: 497 GLYLGHNQLTGSIPESLG-------YLSGNKLYGSVP-TSFGNLNGLTHLDLSCNELDGI 548
L L N + P + L N +V T L GL L E
Sbjct: 181 SLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN- 239
Query: 549 VGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLD---GHIPEKLCSLPYLLYLNLADNR 605
L L L +F + LD I + L + +L
Sbjct: 240 ------EGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVT 293
Query: 606 LEGEVPRSGICQNLSIISLTGNK 628
+E S + L K
Sbjct: 294 IERVKDFSY-NFGWQHLELVNCK 315
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 267 bits (686), Expect = 6e-83
Identities = 90/219 (41%), Positives = 127/219 (57%), Gaps = 15/219 (6%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLS----QATGQCDREFAAEMETLDMVKHQNLVQL 722
N +G GGF +KG + + TVAVKKL+ T + ++F E++ + +H+NLV+L
Sbjct: 37 NKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWL--RNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
LG+ S G++ LVY YM NGSL D L + L W RCKIA GAA GI+FLH
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---N 152
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLI-SDCESHVSTDTADTIGYVPSEYGQAGRA 839
+ IH DIK++NILL++ F AK+SDFGLAR ++ +++ T Y+ E G
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEA-LRGEI 211
Query: 840 NERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWV 878
+ DIYSFGV+LLE++TG E + L+D
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDEHREPQ---LLLDIK 247
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 275 bits (706), Expect = 6e-80
Identities = 97/576 (16%), Positives = 185/576 (32%), Gaps = 70/576 (12%)
Query: 122 NQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLG 181
+ L R+ +SL G +P +G + +LK L F + +
Sbjct: 309 DMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGD 368
Query: 182 DLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGN---IPPEIGNLKKLSDL 238
+ + + + L Q L+ D+ + ++ N P + + L D
Sbjct: 369 EELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDT 428
Query: 239 YLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNML 298
+G +++ I+ I + L+ I +N+ + + N D
Sbjct: 429 QIGNLTNRIT----FISKAIQRLTKLQIIYFANSPFTYDNIAV-----DWEDANSDYAKQ 479
Query: 299 SGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGV--------- 348
E + +L+++ L N +P+++ +LP L+ ++ N
Sbjct: 480 YENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTR 539
Query: 349 IPVSLWNSENLMEFNAASNLLEG-SLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNI 407
+ + F N LE S + V L LD N + + G +
Sbjct: 540 LADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR--HLEAFGTNVKL 597
Query: 408 QILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN---------GCVVVVYLLLNNNMLS 458
LKL+ N + I + L N L V+ + + N +
Sbjct: 598 TDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIG 657
Query: 459 GKIPG-----SLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESL 513
+ + N +T+ L N + F + + L +N +T SIPE+
Sbjct: 658 SEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPEN- 715
Query: 514 GYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGI------------VGLYVQSNKFYGE 561
++ N LT +DL N+L + + V N F
Sbjct: 716 -------SLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCF-SS 767
Query: 562 IPPELGNLVQLEYLDFSM------NMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGI 615
P + N QL+ N + P + + P L+ L + N + +V +
Sbjct: 768 FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KVD-EKL 825
Query: 616 CQNLSIISLTGNKDLCEKIMGSDCQILTFGKLALVG 651
L I+ + N + S C + G L+
Sbjct: 826 TPQLYILDIADNP-NISIDVTSVCPYIEAGMYVLLY 860
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 271 bits (694), Expect = 3e-78
Identities = 94/654 (14%), Positives = 196/654 (29%), Gaps = 112/654 (17%)
Query: 17 TFTAIDEPKQERRSLVHFKNSLQNP------------QVLSGWNKTTRHCHWFGVKC--- 61
E ++ ++L +L WN W
Sbjct: 260 QLKETAEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDL 319
Query: 62 -RHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVG 120
+ RV L + KG V + L+ L++L + M
Sbjct: 320 DNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEER 379
Query: 121 ENQLSGSIPS-QLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNG----- 174
++++ L RL L ++ E+ IK+ + +
Sbjct: 380 KHRIRMHYKKMFLDYDQRLNLSDLLQDAINRN--PEMKPIKKDSRISLKDTQIGNLTNRI 437
Query: 175 -TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLK------------------NLQSLSYLD 215
I + LT+LQ + +++ + + NL+ L+ ++
Sbjct: 438 TFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE 497
Query: 216 VSNNLLSGNIPPEIGNLKKLSDLYLG----IGPYQLSLFVGRITPEIGNCSMLKYISLSN 271
+ N +P + +L +L L + I QL R+ + ++ +
Sbjct: 498 LYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGY 557
Query: 272 NKLSG-PIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYI 330
N L P L L ++ N + + F L++L L N+I IPE
Sbjct: 558 NNLEEFPASASLQKMVKLGLLDCVHNKV--RHLEAFGTNVKLTDLKLDYNQIE-EIPEDF 614
Query: 331 SELP--LKVFDLQYNNFTGV-IPVSLWNSENLMEFNAASNLLEG-----SLSWEISNAVA 382
++ +N + + + + + + N + S S + +
Sbjct: 615 CAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674
Query: 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI-------IPMEFGDCISLNTLD 435
+ LS N + + + + I + L++N I + + L T+D
Sbjct: 675 ASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTID 734
Query: 436 LGSNNLNGCVVVVYLLLNNNMLSGKIPGSL--SRLTNLTTLNLFGNLLTGSIPPEFGDSL 493
L N L + + L L+ +++ N + S P + +S
Sbjct: 735 LRFNKLTS-----------------LSDDFRATTLPYLSNMDVSYNCFS-SFPTQPLNSS 776
Query: 494 KVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYV 553
+++ + H + GN++ PT L L + N++
Sbjct: 777 QLKAFGIRHQRD----------AEGNRILRQWPTGITTCPSLIQLQIGSNDI-------- 818
Query: 554 QSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLE 607
++ +L QL LD + N +C L ++ +
Sbjct: 819 ------RKVDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 232 bits (593), Expect = 2e-64
Identities = 65/502 (12%), Positives = 142/502 (28%), Gaps = 80/502 (15%)
Query: 75 SLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGL 134
+K +L +I +L+ + +S + L +L+++ + + +
Sbjct: 413 EMKPIKKDSRISLKDTQIGNLTNRI--TFISKAIQRLTKLQIIYFANSPFTYDNIA---- 466
Query: 135 LTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194
E + ++K L ++ +P L DL +LQ L+++ N
Sbjct: 467 -VDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525
Query: 195 LLSGSLPV--------SLLKNLQSLSYLDVSNNLLSGNIPPE--IGNLKKLSDLYLGIGP 244
+ + + + N L P + + KL L
Sbjct: 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEE-FPASASLQKMVKLGLLDCV--- 581
Query: 245 Y-QLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC-NSGSLVEINLDGNMLSGTI 302
+ ++ G L + L N++ IP + C + + + N L I
Sbjct: 582 HNKVRHL-----EAFGTNVKLTDLKLDYNQIEE-IPEDFCAFTDQVEGLGFSHNKLK-YI 634
Query: 303 EDVFD--RCTNLSELVLVNNRISGSIPEYISELP------LKVFDLQYNNFTGVIPVSLW 354
++F+ + + N+I + L YN
Sbjct: 635 PNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFA 694
Query: 355 NSENLMEFNAASNLLE-------GSLSWEISNAVALEKLDLSSNMLTRQIPKKI--GNLT 405
+ ++NL+ N L +DL N LT + L
Sbjct: 695 TGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLP 753
Query: 406 NIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSL 465
+ + ++ N F P + + L + N + + P +
Sbjct: 754 YLSNMDVSYNCFSSF-PTQPLNSSQLKAFGIRHQ----------RDAEGNRILRQWPTGI 802
Query: 466 SRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKL-YGS 524
+ +L L + N + + + L + L ++ N
Sbjct: 803 TTCPSLIQLQIGSNDIR-KVDEKLTPQLYI-----------------L-DIADNPNISID 843
Query: 525 VPTSFGNL-NGLTHLDLSCNEL 545
V + + G+ L +
Sbjct: 844 VTSVCPYIEAGMYVLLYDKTQD 865
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 2e-36
Identities = 61/452 (13%), Positives = 137/452 (30%), Gaps = 64/452 (14%)
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLK 265
+ L + V+ S K D+ + + L G ++
Sbjct: 168 RVTTELKGMKVTYKEDSKEHQNPDNANDKYMDIGVATCDSAVWL-------PAGTYQVVA 220
Query: 266 YISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGS 325
Y + S + + S + N L T + + + +
Sbjct: 221 YTTYSQSGIK--RSELETQSVRGESFTVIDNKL-----------TKDANVPIQLKETAEY 267
Query: 326 IPEYISELPL-KVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE 384
I +Y + + + D + + + +S N FN ++ ++ N +
Sbjct: 268 IKDYKALKAIWEALDGKNWRYYSGTINNTIHSLN-WNFNKELDMWGDQPGVDLDNNGRVT 326
Query: 385 KLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN-- 442
L L+ ++P IG LT +++L ++ + + ++ + + + +
Sbjct: 327 GLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMH 386
Query: 443 ------------GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFG 490
++ +N N I T + N +T I
Sbjct: 387 YKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRIT-FISKAIQ 445
Query: 491 DSLKVQGLYLGHNQLTGSIPESLG---YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDG 547
K+Q +Y ++ T K Y + S+ NL LT ++L
Sbjct: 446 RLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY------ 499
Query: 548 IVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDG---------HIPEKLCSLPYLLY 598
+ ++P L +L +L+ L+ + N + + + P +
Sbjct: 500 -------NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQI 552
Query: 599 LNLADNRLEGEVPRSGICQ--NLSIISLTGNK 628
+ N LE + + + L ++ NK
Sbjct: 553 FYMGYNNLEEFPASASLQKMVKLGLLDCVHNK 584
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 266 bits (683), Expect = 7e-79
Identities = 120/565 (21%), Positives = 195/565 (34%), Gaps = 78/565 (13%)
Query: 87 LSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSN 146
+S L+ S N+L + S L L L + Q+ RL+T+ L +N
Sbjct: 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91
Query: 147 SFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLK 206
+ L K LK L F G++ L + L+ L L N +S S+ +
Sbjct: 92 PLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHIS-SIKLPKGF 150
Query: 207 NLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKY 266
+ L LD NN + ++ +L++ ++L L + + I P + ++ +
Sbjct: 151 PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLN----GNDIAGIEPGAFDSAVFQS 206
Query: 267 ISLSNNKLSGPIPRELCNSG----------------------------SLVEINLDGNML 298
++ + I + L NS S+ INL +
Sbjct: 207 LNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYF 266
Query: 299 SGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSE 357
+ F + L EL L +S +P + L LK L N F + +S N
Sbjct: 267 FNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFP 325
Query: 358 NLMEFNAASNLLEGSL-SWEISNAVALEKLDLSSNMLTRQ--IPKKIGNLTNIQILKLNS 414
+L + N L + + N L +LDLS + + ++ NL+++Q L L+
Sbjct: 326 SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSY 385
Query: 415 NFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTL 474
N + F +C L LDL L L L L
Sbjct: 386 NEPLSLKTEAFKECPQLELLDLAFTRLKVKD---------------AQSPFQNLHLLKVL 430
Query: 475 NLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG-----------YLSGNKLYG 523
NL +LL S F +Q L L N + LS L
Sbjct: 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS 490
Query: 524 SVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLD 583
+F +L + H+DLS N L L +L + YL+ + N +
Sbjct: 491 IDQHAFTSLKMMNHVDLSHNRLTSS-------------SIEALSHLKGI-YLNLASNHIS 536
Query: 584 GHIPEKLCSLPYLLYLNLADNRLEG 608
+P L L +NL N L+
Sbjct: 537 IILPSLLPILSQQRTINLRQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 255 bits (654), Expect = 8e-75
Identities = 107/572 (18%), Positives = 190/572 (33%), Gaps = 60/572 (10%)
Query: 115 KMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNG 174
K + L+ IP L E + N + + L LD + +
Sbjct: 15 KTYNCENLGLN-EIPG--TLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW 71
Query: 175 TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKK 234
+L L L+ N L + + L ++L +L +S + N K
Sbjct: 72 IHEDTFQSQHRLDTLVLTANPLI-FMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKT 130
Query: 235 LSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSL--VEIN 292
L LYLG + P+ LK + NN + ++ + + +N
Sbjct: 131 LESLYLG-----SNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLN 185
Query: 293 LDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP---LKVFDLQYNNFTGVI 349
L+GN ++ IE L + I + + L + + + +
Sbjct: 186 LNGNDIA-GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDIS 244
Query: 350 PVSLWNSE--NLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNI 407
P ++ N + S L++LDL++ L+ ++P + L+ +
Sbjct: 245 PAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTL 303
Query: 408 QILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVV---------VVYLLLNNNML- 457
+ L L++N F+ + + + SL L + N + + L L+++ +
Sbjct: 304 KKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIE 363
Query: 458 -SGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG-- 514
S L L++L +LNL N F + +++ L L +L +S
Sbjct: 364 TSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQN 423
Query: 515 -------YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVG--------------LYV 553
LS + L S F L L HL+L N L +
Sbjct: 424 LHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVL 483
Query: 554 QSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS 613
+L + ++D S N L E L L +YLNLA N + +P
Sbjct: 484 SFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLK-GIYLNLASNHISIILPSL 542
Query: 614 -GICQNLSIISLTGNKDLCEKIMGSDCQILTF 644
I I+L N C C + F
Sbjct: 543 LPILSQQRTINLRQNPLDC------TCSNIYF 568
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 237 bits (606), Expect = 4e-68
Identities = 98/487 (20%), Positives = 166/487 (34%), Gaps = 29/487 (5%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
+ L L L+ N L +S K LK L + +S L LE++ L S
Sbjct: 79 SQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGS 138
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQ--DLDLSDNLLSGSLPVS 203
N + + ++LK LDF N ++ + L Q L+L+ N ++ +
Sbjct: 139 NHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA-GIEPG 197
Query: 204 LLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSM 263
+ L+ I + N S + + S
Sbjct: 198 AFDSA-VFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMS- 255
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323
++ I+L + L E++L LS + + L +LVL N+
Sbjct: 256 VESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFE 314
Query: 324 GSIPEYISELP-LKVFDLQYNNFTGVI-PVSLWNSENLMEFNAASNLLEGS--LSWEISN 379
S P L ++ N + L N ENL E + + + +E S + ++ N
Sbjct: 315 NLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRN 374
Query: 380 AVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPME-FGDCISLNTLDLGS 438
L+ L+LS N + +++L L F + L L+L
Sbjct: 375 LSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSH 434
Query: 439 NNLN--------GCVVVVYLLLNNNMLSGKI---PGSLSRLTNLTTLNLFGNLLTGSIPP 487
+ L+ G + +L L N SL L L L L L+
Sbjct: 435 SLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQH 494
Query: 488 EFGDSLKVQGLYLGHNQLTGSIPESLG-------YLSGNKLYGSVPTSFGNLNGLTHLDL 540
F + + L HN+LT S E+L L+ N + +P+ L+ ++L
Sbjct: 495 AFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIYLNLASNHISIILPSLLPILSQQRTINL 554
Query: 541 SCNELDG 547
N LD
Sbjct: 555 RQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 6e-40
Identities = 68/302 (22%), Positives = 117/302 (38%), Gaps = 17/302 (5%)
Query: 80 VSPFLF-NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRL 138
+S F S L+ LDL+ L +L + L LK L + N+ L
Sbjct: 269 ISSNTFHCFSGLQELDLTATHL-SELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL 327
Query: 139 ETISLRSNSFTGEMPSE-LGDIKQLKSLDFSGNGLNGTIPSR--LGDLTQLQDLDLSDNL 195
+S++ N+ E+ + L +++ L+ LD S + + + L +L+ LQ L+LS N
Sbjct: 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNE 387
Query: 196 LSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGPY-QLSLFVGR 253
SL K L LD++ L NL L L L + L + +
Sbjct: 388 PL-SLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLS---HSLLDISSEQ 443
Query: 254 ITPEIGNCSMLKYISLSNNKLSGPI---PRELCNSGSLVEINLDGNMLSGTIEDVFDRCT 310
+ L++++L N L G L + L LS + F
Sbjct: 444 L---FDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLK 500
Query: 311 NLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLE 370
++ + L +NR++ S E +S L +L N+ + ++P L N N L+
Sbjct: 501 MMNHVDLSHNRLTSSSIEALSHLKGIYLNLASNHISIILPSLLPILSQQRTINLRQNPLD 560
Query: 371 GS 372
+
Sbjct: 561 CT 562
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 251 bits (644), Expect = 7e-77
Identities = 93/336 (27%), Positives = 143/336 (42%), Gaps = 63/336 (18%)
Query: 26 QERRSLVHFKNSLQNPQVLSGWNKTTRHCH--WFGVKC----RHSRVVSLVIQTQSLKG- 78
Q++++L+ K L NP LS W TT C+ W GV C + RV +L + +L
Sbjct: 6 QDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKP 65
Query: 79 -PVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTR 137
P+ L NL L L + N L G IP + LT+
Sbjct: 66 YPIPSSLANLPYLNFLYIGGI-----------------------NNLVGPIPPAIAKLTQ 102
Query: 138 LETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLS 197
L + + + +G +P L IK L +LDFS N L+GT+P + L L + N +S
Sbjct: 103 LHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS 162
Query: 198 GSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPE 257
G++P S + + + +S N L+G IPP NL
Sbjct: 163 GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN------------------------ 198
Query: 258 IGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVL 317
L ++ LS N L G + + +I+L N L+ + V NL+ L L
Sbjct: 199 ------LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGL-SKNLNGLDL 251
Query: 318 VNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVS 352
NNRI G++P+ +++L L ++ +NN G IP
Sbjct: 252 RNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 250 bits (642), Expect = 2e-76
Identities = 77/304 (25%), Positives = 119/304 (39%), Gaps = 41/304 (13%)
Query: 339 DLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGS--LSWEISNAVALEKLDLSS-NMLTR 395
D + GV+ + + + + + L + ++N L L + N L
Sbjct: 32 DCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG 91
Query: 396 QIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNN 455
IP I LT + L + G IP +L TLD N L
Sbjct: 92 PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNAL-------------- 137
Query: 456 MLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLK-VQGLYLGHNQLTGSIPESLG 514
SG +P S+S L NL + GN ++G+IP +G K + + N+LTG IP +
Sbjct: 138 --SGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFA 195
Query: 515 -------YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELG 567
LS N L G FG+ + L+ N ++ ++G
Sbjct: 196 NLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLA-------------KNSLAFDLG-KVG 241
Query: 568 NLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGN 627
L LD N + G +P+ L L +L LN++ N L GE+P+ G Q + + N
Sbjct: 242 LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN 301
Query: 628 KDLC 631
K LC
Sbjct: 302 KCLC 305
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 228 bits (583), Expect = 4e-68
Identities = 79/295 (26%), Positives = 125/295 (42%), Gaps = 14/295 (4%)
Query: 153 PSELGDIKQLKS----LDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSL-LKN 207
+LG+ L S D G + ++ +LDLS L P+ L N
Sbjct: 15 KKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLAN 74
Query: 208 LQSLSYLDVSN-NLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKY 266
L L++L + N L G IPP I L +L LY+ + G I + L
Sbjct: 75 LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITH-----TNVSGAIPDFLSQIKTLVT 129
Query: 267 ISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSE-LVLVNNRISGS 325
+ S N LSG +P + + +LV I DGN +SG I D + + L + + NR++G
Sbjct: 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK 189
Query: 326 IPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEK 385
IP + L L DL N G V + +N + + A N L L ++ + L
Sbjct: 190 IPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNG 248
Query: 386 LDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNN 440
LDL +N + +P+ + L + L ++ N G IP + G+ + +N
Sbjct: 249 LDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNK 302
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 215 bits (549), Expect = 3e-63
Identities = 74/345 (21%), Positives = 126/345 (36%), Gaps = 57/345 (16%)
Query: 257 EIGNCSML----KYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGT--IEDVFDRCT 310
++GN + L N G + + + ++L G L I
Sbjct: 17 DLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLP 76
Query: 311 NLSELVLVN-NRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNL 368
L+ L + N + G IP I++L L + + N +G IP L + L+ + + N
Sbjct: 77 YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNA 136
Query: 369 LEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTN-IQILKLNSNFFDGIIPMEFGD 427
L G+L IS+ L + N ++ IP G+ + + ++ N G IP F +
Sbjct: 137 LSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN 196
Query: 428 CISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPP 487
+L +DL N L G N ++L N L +
Sbjct: 197 L-NLAFVDLSRNML----------------EGDASVLFGSDKNTQKIHLAKNSLAFDLG- 238
Query: 488 EFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDG 547
+ G S + GL L +N++ G++P+ L L L L++S
Sbjct: 239 KVGLSKNLNGLDLRNNRIYGTLPQGLT----------------QLKFLHSLNVS------ 276
Query: 548 IVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCS 592
N GEIP + GNL + + ++ N P C+
Sbjct: 277 -------FNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSPLPACT 313
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 1e-48
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 75 SLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGL 134
++ G + FL + +L LD S N L G L P +S+L L ++ N++SG+IP G
Sbjct: 112 NVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171
Query: 135 LTRLET-ISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSD 193
++L T +++ N TG++P ++ L +D S N L G G Q + L+
Sbjct: 172 FSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAK 230
Query: 194 NLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPY-QLSLFVG 252
N L+ L + ++L+ LD+ NN + G +P + LK L L + + L G
Sbjct: 231 NSLAFDLGK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVS---FNNLC---G 282
Query: 253 RITPEIGNCSMLKYISLSNNKL--SGPIP 279
I P+ GN + +NNK P+P
Sbjct: 283 EI-PQGGNLQRFDVSAYANNKCLCGSPLP 310
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 240 bits (614), Expect = 3e-69
Identities = 112/588 (19%), Positives = 190/588 (32%), Gaps = 84/588 (14%)
Query: 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNS 147
SS + +DLS N L S SN L+ L + ++ L L + L N
Sbjct: 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91
Query: 148 FTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKN 207
P + L++L L +G L L+ L+++ N + + N
Sbjct: 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSN 151
Query: 208 LQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYI 267
L +L ++D+S N + ++ L++ + +
Sbjct: 152 LTNLVHVDLSYNYIQTITVNDLQFLRENPQV-------------------------NLSL 186
Query: 268 SLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTI-EDVFDRCTNLSELVLVNNRISG-- 324
+S N + I + L E+ L GN S I + L L+
Sbjct: 187 DMSLNPIDF-IQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDER 245
Query: 325 -------SIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEI 377
SI E + ++ + F L Y N V N+ + A ++ +
Sbjct: 246 NLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLED--V 303
Query: 378 SNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLG 437
+ L + L Q P +L ++ L L N SL+ LDL
Sbjct: 304 PKHFKWQSLSIIRCQLK-QFPT--LDLPFLKSLTLTMNKGSISFK--KVALPSLSYLDLS 358
Query: 438 SNNLN----------GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPP 487
N L+ G + +L L+ N + + L L L+ + L
Sbjct: 359 RNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEF 417
Query: 488 EFGDSL-KVQGLYLGHNQLTGSIPESLG--------YLSGNKLYGSVPTS-FGNLNGLTH 537
SL K+ L + + ++GN + ++ F N LT
Sbjct: 418 SAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTF 477
Query: 538 LDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLL 597
LDLS +L+ I L +L+ L+ S N L L L
Sbjct: 478 LDLSKCQLEQI-------------SWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLS 524
Query: 598 YLNLADNRLEGEVPRS-GICQNLSIISLTGNKDLCEKIMGSDCQILTF 644
L+ + NR+E ++L+ +LT N C C+ F
Sbjct: 525 TLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVAC------ICEHQKF 566
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 214 bits (548), Expect = 4e-60
Identities = 87/486 (17%), Positives = 153/486 (31%), Gaps = 54/486 (11%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSG-SIPSQLGLLTRLETISLR 144
L+SL L + L S + L LK L+V N + +P+ LT L + L
Sbjct: 102 GLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLS 161
Query: 145 SNSFTGEMPSELGDIKQLK----SLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSL 200
N ++L +++ SLD S N ++ I + +L +L L N S ++
Sbjct: 162 YNYIQTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQGIKLHELTLRGNFNSSNI 220
Query: 201 PVSLLKNLQSLSYLDVSNNLLSGNIP---PEIGNLKKLSDLYLGIGPYQLSLFVGRITP- 256
+ L+NL L + E ++ L D+ + + L
Sbjct: 221 MKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTID----EFRLTYTNDFSD 276
Query: 257 ---EIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLS 313
+ + + +SL+ + ++ +++ L + L
Sbjct: 277 DIVKFHCLANVSAMSLAGVSIKYL--EDVPKHFKWQSLSIIRCQLK---QFPTLDLPFLK 331
Query: 314 ELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSE--NLMEFNAASNLLE 370
L L N+ S I LP L DL N + S + +L + + N
Sbjct: 332 SLTLTMNKGS--ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI 389
Query: 371 GSLSWEISNAVALEKLDLSSNMLTRQIPKK-IGNLTNIQILKLNSNFFDGIIPMEFGDCI 429
+S L+ LD + L R +L + L ++ F
Sbjct: 390 -IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLT 448
Query: 430 SLNTLDLGSNNLNGCVVVV---------YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNL 480
SLNTL + N+ + +L L+ L G L L LN+ N
Sbjct: 449 SLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNN 508
Query: 481 LTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDL 540
L + + L N++ S L +L
Sbjct: 509 LLFLDSSHYNQLYSLSTLDCSFNRIETSK----------------GILQHFPKSLAFFNL 552
Query: 541 SCNELD 546
+ N +
Sbjct: 553 TNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 169 bits (429), Expect = 3e-44
Identities = 68/415 (16%), Positives = 118/415 (28%), Gaps = 64/415 (15%)
Query: 80 VSPFLFNLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLS------VGENQLSGSIPSQL 132
+ F L L L N + NL L + E L PS +
Sbjct: 196 IQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIM 255
Query: 133 GLLTRLETISLR--SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLD 190
L + R + + + + + ++ +G + + + Q L
Sbjct: 256 EGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSI--KYLEDVPKHFKWQSLS 313
Query: 191 LSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSL- 249
+ L P L L+ L ++ N S I + L LS L L + +L
Sbjct: 314 IIRCQLK-QFPTLDLPFLK---SLTLTMNKGS--ISFKKVALPSLSYLDL----SRNALS 363
Query: 250 FVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE-DVFDR 308
F G + + L+++ LS N + L ++ + L E F
Sbjct: 364 FSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLS 422
Query: 309 CTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASN 367
L L + L L + N+F ++
Sbjct: 423 LEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNV-------------- 468
Query: 368 LLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGD 427
+N L LDLS L + L +Q+L ++ N + +
Sbjct: 469 ---------FANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQ 519
Query: 428 CISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT 482
SL+TLD + N + +L NL N +
Sbjct: 520 LYSLSTLD----------------CSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 2e-31
Identities = 57/326 (17%), Positives = 101/326 (30%), Gaps = 30/326 (9%)
Query: 324 GSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVAL 383
GS+ I +P + + +P + + + + N L+ S+ SN L
Sbjct: 2 GSLNPCIEVVPNITYQCMDQKLSK-VPDDI--PSSTKNIDLSFNPLKILKSYSFSNFSEL 58
Query: 384 EKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNG 443
+ LDLS + K L ++ L L N P F SL L L
Sbjct: 59 QWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLAS 118
Query: 444 CVVVV--------YLLLNNNMLSG-KIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGD--- 491
L + +N + K+P S LTNL ++L N + +
Sbjct: 119 LESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRE 178
Query: 492 -SLKVQGLYLGHNQLTGSIPESLG-------YLSGNKLYGSVP-TSFGNLNGLTHLDLSC 542
L + N + ++ L GN ++ T NL GL L
Sbjct: 179 NPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLIL 238
Query: 543 NELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLA 602
E L + I L ++ ++ + K L + ++LA
Sbjct: 239 GEFKDERNLEIFEP----SIMEGLCDV-TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLA 293
Query: 603 DNRLEGEVPRSGICQNLSIISLTGNK 628
++ + +S+ +
Sbjct: 294 GVSIK-YLEDVPKHFKWQSLSIIRCQ 318
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-22
Identities = 33/145 (22%), Positives = 52/145 (35%), Gaps = 3/145 (2%)
Query: 79 PVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQ-LGLLTR 137
S FL +L L LD+S L L L + N + S T
Sbjct: 416 EFSAFL-SLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTN 474
Query: 138 LETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLS 197
L + L + +L+ L+ S N L S L L LD S N +
Sbjct: 475 LTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534
Query: 198 GSLPVSLLKNLQSLSYLDVSNNLLS 222
+ L +SL++ +++NN ++
Sbjct: 535 -TSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 2e-15
Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 1/124 (0%)
Query: 75 SLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLG 133
+ K L+SL L ++ N V +N L L + + QL
Sbjct: 435 NTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFD 494
Query: 134 LLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSD 193
L RL+ +++ N+ S + L +LD S N + + L +L++
Sbjct: 495 TLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTN 554
Query: 194 NLLS 197
N ++
Sbjct: 555 NSVA 558
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 210 bits (537), Expect = 1e-61
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ V G F +K + ++ VAVK Q + E+ +L +KH+N++Q
Sbjct: 26 LQLLEVKARGRFGCVWKAQLLNE-YVAVKIFPIQDKQSW-QNEYEVYSLPGMKHENILQF 83
Query: 723 LGYCSVGE----EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH-- 776
+G G + L+ + GSL D+L+ + W + C IA ARG+++LH
Sbjct: 84 IGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDI 141
Query: 777 -----GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGYVP 830
G KP I H DIK+ N+LL + A ++DFGLA +S T T Y+
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 831 SEYGQAG-----RANERGDIYSFGVILLELVTGKQPTGPEFED 868
E + A R D+Y+ G++L EL + ++
Sbjct: 202 PEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE 244
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 202 bits (517), Expect = 4e-57
Identities = 101/495 (20%), Positives = 175/495 (35%), Gaps = 72/495 (14%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
L+ L K + +S ++L ++ L + + L L I+ +
Sbjct: 22 ALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSN 77
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205
N T + L ++ +L + + N + P L +LT L L L +N ++ + L
Sbjct: 78 NQLTD--ITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITD---IDPL 130
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLK 265
KNL +L+ L++S+N +S + L L L G L + N + L+
Sbjct: 131 KNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFGNQVTDLK--------PLANLTTLE 180
Query: 266 YISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGS 325
+ +S+NK+S L +L + N +S TNL EL L N++
Sbjct: 181 RLDISSNKVSDISV--LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD- 235
Query: 326 IPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE 384
++ L L DL N + + P+S L E +N + ++ AL
Sbjct: 236 -IGTLASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQISNISP--LAGLTALT 290
Query: 385 KLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGC 444
L+L+ N L P I NL N+ L L N I P L L +N ++
Sbjct: 291 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD- 345
Query: 445 VVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQ 504
SL+ LTN+ L+ N ++ P + ++ L L
Sbjct: 346 -----------------VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQA 386
Query: 505 LTGSIPESLGYLSGNKLYG------SVPTSFGNLNGLTHLDLSCNELDGI---------- 548
T + +S P + + T D++ N
Sbjct: 387 WTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQP 446
Query: 549 VGLYVQSNKFYGEIP 563
V + + F G +
Sbjct: 447 VTIGKGTTTFSGTVT 461
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 192 bits (491), Expect = 1e-53
Identities = 94/496 (18%), Positives = 172/496 (34%), Gaps = 66/496 (13%)
Query: 130 SQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDL 189
L L + T D+ Q+ +L G+ + L L +
Sbjct: 18 FTDTALAEKMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGI--KSIDGVEYLNNLTQI 73
Query: 190 DLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSL 249
+ S+N L+ P+ L L + ++NN ++ + NL L+ L L Q++
Sbjct: 74 NFSNNQLTDITPLKNLTKLV---DILMNNNQIAD--ITPLANLTNLTGLTLFN--NQIT- 125
Query: 250 FVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRC 309
+ N + L + LS+N +S L SL +++ +
Sbjct: 126 ----DIDPLKNLTNLNRLELSSNTISDISA--LSGLTSLQQLSFGNQVTD---LKPLANL 176
Query: 310 TNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNL 368
T L L + +N++S +++L L+ N + + P L NL E + N
Sbjct: 177 TTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQ 232
Query: 369 LEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDC 428
L+ + +++ L LDL++N ++ P + LT + LKL +N I P
Sbjct: 233 LK-DIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 286
Query: 429 ISLNTLDLGSNNLNG------CVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT 482
+L L+L N L + YL L N +S P +S LT L L + N ++
Sbjct: 287 TALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVS 344
Query: 483 GSIPPEFGDSLKVQGLYLGHNQLTGSIP-------ESLGYLSGNKLYGSVPTSFGNLNGL 535
+ + L GHNQ++ P L L+ + N +
Sbjct: 345 D--VSSLANLTNINWLSAGHNQISDLTPLANLTRITQL-GLNDQAWTNAPVNYKAN---V 398
Query: 536 THLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPY 595
+ + N ++ P + + D + N+ E +
Sbjct: 399 SIPNTVKNVTGALI------------APATISDGGSYTEPDITWNLPSY-TNEVSYTFSQ 445
Query: 596 LLYLNLADNRLEGEVP 611
+ + G V
Sbjct: 446 PVTIGKGTTTFSGTVT 461
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 2e-49
Identities = 97/442 (21%), Positives = 173/442 (39%), Gaps = 49/442 (11%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
+ L++L ++ S N L ++P + NL +L + + NQ++ P L LT L +
Sbjct: 62 DGVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117
Query: 142 SLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201
+L +N T L ++ L L+ S N ++ S L LT LQ L + +
Sbjct: 118 TLFNNQITD--IDPLKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFGNQVTD---- 169
Query: 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT--PEIG 259
+ L NL +L LD+S+N +S + L L L +I+ +G
Sbjct: 170 LKPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNN---------QISDITPLG 218
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319
+ L +SL+ N+L L + +L +++L N +S T L+EL L
Sbjct: 219 ILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 274
Query: 320 NRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEIS 378
N+IS P ++ L L +L N + P + N +NL N + +S
Sbjct: 275 NQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDIS--PVS 328
Query: 379 NAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGS 438
+ L++L +N ++ + NLTNI L N + P + + L L
Sbjct: 329 SLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 384
Query: 439 NNLNG-------CVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGD 491
V + + N P ++S + T ++ NL +
Sbjct: 385 QAWTNAPVNYKANVSIPNTVKNVTGAL-IAPATISDGGSYTEPDITWNLPS-YTNEVSYT 442
Query: 492 SLKVQGLYLGHNQLTGSIPESL 513
+ + G +G++ + L
Sbjct: 443 FSQPVTIGKGTTTFSGTVTQPL 464
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 198 bits (504), Expect = 6e-53
Identities = 115/545 (21%), Positives = 195/545 (35%), Gaps = 59/545 (10%)
Query: 122 NQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-L 180
L+ +P +L E + L N S ++QL+ L+ TI
Sbjct: 14 CNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAF 69
Query: 181 GDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE--IGNLKKLSDL 238
+L L+ LDL + + L + L L L + LS + + NLK L+ L
Sbjct: 70 RNLPNLRILDLGSSKIY-FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRL 128
Query: 239 YLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCN--SGSLVEINLDGN 296
L + + + P G + LK I S+N++ EL +L +L N
Sbjct: 129 DLS----KNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAAN 184
Query: 297 MLSGTIEDVFDRCTN-LSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWN 355
L + + +C N +VL +SG+ + F N + SL
Sbjct: 185 SLYSRVSVDWGKCMNPFRNMVLEILDVSGN---GWTVDITGNFS---NAISKSQAFSLIL 238
Query: 356 SENLMEFNAASNLLEGSLSWEISN--AVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLN 413
+ ++M + ++ + ++ LDLS + + L ++++L L
Sbjct: 239 AHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLA 298
Query: 414 SNFFDGIIPMEFGDCISLNTLDLGSNNL--------NGCVVVVYLLLNNNMLSGKIPGSL 465
N + I F +L L+L N L G V Y+ L N ++ +
Sbjct: 299 YNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTF 358
Query: 466 SRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG----YLSGNKL 521
L L TL+L N LT + ++L N+L +L +LS N+L
Sbjct: 359 KFLEKLQTLDLRDNALT-----TIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRL 413
Query: 522 YG-SVPTSFGNLNGLTHLDLSCNELDGIVG------------LYVQSNKFYGEIPPEL-- 566
+ + L L L+ N G L++ N EL
Sbjct: 414 ENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCW 473
Query: 567 ---GNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIIS 623
L L+ L + N L+ P L L L+L NRL + + + NL I+
Sbjct: 474 DVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT-VLSHNDLPANLEILD 532
Query: 624 LTGNK 628
++ N+
Sbjct: 533 ISRNQ 537
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 190 bits (483), Expect = 3e-50
Identities = 115/581 (19%), Positives = 209/581 (35%), Gaps = 72/581 (12%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144
L L++L+L + + NL L++L +G +++ P L L + L
Sbjct: 46 FLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLY 105
Query: 145 SNSFTGEM--PSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLP 201
+ + ++K L LD S N + + G L L+ +D S N + +
Sbjct: 106 FCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF-LVC 164
Query: 202 VSLLKNLQ--SLSYLDVSNNLLSGNIPPEIGN-LKKLSDLYLGIGPYQLSLFVGRITPEI 258
L+ LQ +LS+ ++ N L + + G + ++ L I L +
Sbjct: 165 EHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEI----LDVS-------- 212
Query: 259 GNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFD--RCTNLSELV 316
GN + +N +S L + ++ + + ++ F +++ L
Sbjct: 213 GNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLD 272
Query: 317 LVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSW 375
L + + L LKV +L YN + + + +NL N + NLL S
Sbjct: 273 LSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSS 332
Query: 376 EISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLD 435
+ +DL N + + L +Q L L N S+ +
Sbjct: 333 NFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL-----TTIHFIPSIPDIF 387
Query: 436 LGSNNLNGCVVVV----YLLLNNNMLSG-KIPGSLSRLTNLTTLNLFGNLLTGSIPPE-- 488
L N L + + L+ N L I L R+ +L L L N + S +
Sbjct: 388 LSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFS-SCSGDQT 446
Query: 489 FGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGI 548
++ ++ L+LG N L + L F L+ L L L+ N L+
Sbjct: 447 PSENPSLEQLFLGENMLQLAWETELC-----------WDVFEGLSHLQVLYLNHNYLN-- 493
Query: 549 VGLYVQSNKFYGEIPPE-LGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLE 607
+PP +L L L + N L + L L+++ N+L
Sbjct: 494 ------------SLPPGVFSHLTALRGLSLNSNRL-TVLSHND-LPANLEILDISRNQL- 538
Query: 608 GEVPRSGICQNLSIISLTGNKDLCEKIMGSDCQILTFGKLA 648
P + +LS++ +T NK +C +C++ TF
Sbjct: 539 -LAPNPDVFVSLSVLDITHNKFIC------ECELSTFINWL 572
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 173 bits (439), Expect = 1e-44
Identities = 121/528 (22%), Positives = 182/528 (34%), Gaps = 71/528 (13%)
Query: 69 LVIQTQSLKGPVSPFLF-NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSG 126
L + +Q + F NL +LRILDL + + L P L L L + LS
Sbjct: 53 LELGSQYTPLTIDKEAFRNLPNLRILDLGSSKI-YFLHPDAFQGLFHLFELRLYFCGLSD 111
Query: 127 SI--PSQLGLLTRLETISLRSNSFTG-EMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDL 183
++ L L + L N + G + LKS+DFS N + L L
Sbjct: 112 AVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171
Query: 184 TQ--LQDLDLSDNLLSGSLPVSLLKNLQ-----SLSYLDVSNNLLSGNIPPEIGN-LKKL 235
L L+ N L + V K + L LDVS N + +I N + K
Sbjct: 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKS 231
Query: 236 SDLYLGIGPYQLSLFVGR-----ITPEI--GNCSM-LKYISLSNNKLSGPIPRELCNSGS 287
L + + + G G ++++ LS+ + R
Sbjct: 232 QAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKD 291
Query: 288 LVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFT 346
L +NL N ++ ++ F NL L L N + LP + DLQ N+
Sbjct: 292 LKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIA 351
Query: 347 GVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTR----------- 395
+ + E L + N L I ++ + LS N L
Sbjct: 352 IIQDQTFKFLEKLQTLDLRDNALT-----TIHFIPSIPDIFLSGNKLVTLPKINLTANLI 406
Query: 396 ----------QIPKKIGNLTNIQILKLNSNFFDGIIP-MEFGDCISLNTLDLGSNNLNGC 444
I + + ++QIL LN N F + SL L LG N L
Sbjct: 407 HLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLA 466
Query: 445 VVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE-FGDSLKVQGLYLGHN 503
+ L++L L L N L S+PP F ++GL L N
Sbjct: 467 -----------WETELCWDVFEGLSHLQVLYLNHNYLN-SLPPGVFSHLTALRGLSLNSN 514
Query: 504 QLT----GSIPESLGYL--SGNKLYGSVPTSFGNLN--GLTHLDLSCN 543
+LT +P +L L S N+L P F +L+ +TH C
Sbjct: 515 RLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICE 562
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 193 bits (492), Expect = 6e-53
Identities = 113/564 (20%), Positives = 185/564 (32%), Gaps = 85/564 (15%)
Query: 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNS 147
S + LDLS N L S + L++L + ++ L+ L T+ L N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 148 FTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKN 207
+ L+ L L +G L L++L+++ NL+ N
Sbjct: 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN 147
Query: 208 LQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYI 267
L +L +LD+S+N + ++ L ++ L L +
Sbjct: 148 LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL-------------------------SL 182
Query: 268 SLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTI-EDVFDRCTNLSELVLVNN------ 320
LS N ++ I L ++ L N S + + L LV
Sbjct: 183 DLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEG 241
Query: 321 ---RISGSIPEYISELPLKVFDLQYNN-FTGVIPVSLWNSENLMEFNAASNLLEGSLSWE 376
+ S E + L ++ F L Y + + I N+ F+ S +E
Sbjct: 242 NLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD-- 299
Query: 377 ISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDL 436
S + L+L + + K+ +L L SN D SL LDL
Sbjct: 300 FSYNFGWQHLELVNCKFGQFPTLKLKSLKR---LTFTSNKGGNAFS--EVDLPSLEFLDL 354
Query: 437 GSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQ 496
N L+ G S T+L L+L N + ++ F +++
Sbjct: 355 SRNGLS--------------FKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLE 399
Query: 497 GLYLGHNQLTGSIPESLG---------YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDG 547
L H+ L S+ +S + F L+ L L ++
Sbjct: 400 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMA------ 453
Query: 548 IVGLYVQSNKFYGEIPPE-LGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRL 606
N F P+ L L +LD S L+ P SL L LN+A N+L
Sbjct: 454 -------GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL 506
Query: 607 EGEVPRS--GICQNLSIISLTGNK 628
+ VP +L I L N
Sbjct: 507 K-SVPDGIFDRLTSLQKIWLHTNP 529
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 191 bits (488), Expect = 2e-52
Identities = 116/561 (20%), Positives = 202/561 (36%), Gaps = 79/561 (14%)
Query: 84 LFNLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETIS 142
F+ L++LDLS+ + + +L L L + N + L+ L+ +
Sbjct: 48 FFSFPELQVLDLSRCEI-QTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106
Query: 143 LRSNSFTGEMPSELGDIKQLKSLDFSGNGLN-GTIPSRLGDLTQLQDLDLSDNLLSGSLP 201
+ +G +K LK L+ + N + +P +LT L+ LDLS N + S+
Sbjct: 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIY 165
Query: 202 VSLLKNLQSLSY----LDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPE 257
+ L+ L + LD+S N ++ I P +L L L L++
Sbjct: 166 CTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKT----C 220
Query: 258 IGNCSMLKYISL------SNNKLSGPIPRELCNSGSLVEINLDGNMLSG---TIEDVFDR 308
I + L+ L + L L +L L I D+F+
Sbjct: 221 IQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNC 280
Query: 309 CTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNL 368
TN+S LV+ I + ++ + +L F + L ++L SN
Sbjct: 281 LTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKL---KSLKRLTFTSNK 336
Query: 369 LEGSLSWEISNAVALEKLDLSSNMLTRQ--IPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426
+ S + +LE LDLS N L+ + + T+++ L L+ N + F
Sbjct: 337 GGNAFS--EVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFL 393
Query: 427 DCISLNTLDLGSNNLNGCVVV---------VYLLLNNNMLSGKIPGSLSRLTNLTTLNLF 477
L LD +NL +YL +++ G + L++L L +
Sbjct: 394 GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMA 453
Query: 478 GNLLTGSIPPEFGDSL-KVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLT 536
GN + P+ L + L L QL + PT+F +L+ L
Sbjct: 454 GNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLS---------------PTAFNSLSSLQ 497
Query: 537 HLDLSCNELDGIVGLYVQSNKFYGEIPPE-LGNLVQLEYLDFSMNMLDGHIPEKLCSLPY 595
L+++ N+L +P L L+ + N D CS P
Sbjct: 498 VLNMASNQLK--------------SVPDGIFDRLTSLQKIWLHTNPWD-------CSCPR 536
Query: 596 LLYLNLADNRLEGEVPRSGIC 616
+ YL+ N+ + S C
Sbjct: 537 IDYLSRWLNKNSQKEQGSAKC 557
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 1e-34
Identities = 83/458 (18%), Positives = 153/458 (33%), Gaps = 75/458 (16%)
Query: 79 PVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRL 138
+ + NL++L LDLS N++ + L +L ++
Sbjct: 140 KLPEYFSNLTNLEHLDLSS------------------------NKIQSIYCTDLRVLHQM 175
Query: 139 ETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSG 198
++L SLD S N +N I +L L L +N S
Sbjct: 176 PLLNL--------------------SLDLSLNPMN-FIQPGAFKEIRLHKLTLRNNFDSL 214
Query: 199 SLPVSLLKNLQSLSYLDVSNNLLSGN---IPPEIGNLKKLSDLYLGIGPY-QLSLFVGRI 254
++ + ++ L L + + L+ L +L + L ++ I
Sbjct: 215 NVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDI 274
Query: 255 TPEIGNCSMLKYISLSNNKLSG-PIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLS 313
+ + SL + + L +N + +L
Sbjct: 275 IDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFP------TLKLKSLK 328
Query: 314 ELVLVNNRISGSIPEYISELP-LKVFDLQYNNFT--GVIPVSLWNSENLMEFNAASNLLE 370
L +N+ + E +LP L+ DL N + G S + + +L + + N +
Sbjct: 329 RLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI 386
Query: 371 GSLSWEISNAVALEKLDLSSNMLTRQIPKKI-GNLTNIQILKLNSNFFDGIIPMEFGDCI 429
++S LE LD + L + + +L N+ L ++ F
Sbjct: 387 -TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 445
Query: 430 SLNTLDLGSNNL---------NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNL 480
SL L + N+ + +L L+ L P + + L++L LN+ N
Sbjct: 446 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505
Query: 481 LTGSIPPEFGDSLK-VQGLYLGHNQLTGSIPESLGYLS 517
L S+P D L +Q ++L N S + YLS
Sbjct: 506 LK-SVPDGIFDRLTSLQKIWLHTNPWDCS-CPRIDYLS 541
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 5e-22
Identities = 64/320 (20%), Positives = 98/320 (30%), Gaps = 35/320 (10%)
Query: 333 LPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNM 392
+P + NF IP +L + + + N L S+ + L+ LDLS
Sbjct: 7 VPNITYQCMELNFY-KIPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE 63
Query: 393 LTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL--------NGC 444
+ +L+++ L L N + F SL L NL
Sbjct: 64 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHL 123
Query: 445 VVVVYLLLNNNML-SGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGD----SLKVQGLY 499
+ L + +N++ S K+P S LTNL L+L N + + L L
Sbjct: 124 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLD 183
Query: 500 LGHNQLTGSIPESLG-------YLSGNKLYGSVP-TSFGNLNGLTHLDLSCNELDGIVGL 551
L N + P + L N +V T L GL L E
Sbjct: 184 LSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN---- 239
Query: 552 YVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDG---HIPEKLCSLPYLLYLNLADNRLEG 608
L L L +F + LD I + L + +L +E
Sbjct: 240 ---EGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE- 295
Query: 609 EVPRSGICQNLSIISLTGNK 628
V + L K
Sbjct: 296 RVKDFSYNFGWQHLELVNCK 315
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 184 bits (468), Expect = 2e-52
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 663 IVFENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCD-------REFAAEMETLDMV 714
I +E IG GGF KG + D+ VA+K L + + +EF E+ + +
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 715 KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
H N+V+L G +V E++ G L L ++A + W + ++ A GI ++
Sbjct: 81 NHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 775 HHGFKPYIIHMDIKTSNILL-----NDYFEAKVSDFGLARLISDCESHVSTDTADTIGYV 829
+ P I+H D+++ NI L N AKV+DFGL++ H + ++
Sbjct: 139 QN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ----SVHSVSGLLGNFQWM 193
Query: 830 PSE--YGQAGRANERGDIYSFGVILLELVTGKQP 861
E + E+ D YSF +IL ++TG+ P
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 2e-51
Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 7/203 (3%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKL--SQATGQCDREFAAEMETLDMVKHQNLV 720
+ + IG G F T + VAVK L + EF E+ + ++H N+V
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAA--SLDWGKRCKIAYGAARGISFLHHGF 778
+G + +V EY+ GSL L A LD +R +AY A+G+++LH+
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-R 156
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGR 838
P I+H ++K+ N+L++ + KV DFGL+RL + S A T ++ E +
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS-SKSAAGTPEWMAPEVLRDEP 215
Query: 839 ANERGDIYSFGVILLELVTGKQP 861
+NE+ D+YSFGVIL EL T +QP
Sbjct: 216 SNEKSDVYSFGVILWELATLQQP 238
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 175 bits (446), Expect = 5e-49
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 33/229 (14%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEME--TLDMVKHQNLV 720
+ +IG G + +KG++ D++ VAVK S + F E + +++H N+
Sbjct: 15 LKLLELIGRGRYGAVYKGSL-DERPVAVKVFSF---ANRQNFINEKNIYRVPLMEHDNIA 70
Query: 721 QLLGYCSVGE-----EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
+ + E LLV EY NGSL +L + DW C++A+ RG+++LH
Sbjct: 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLH 128
Query: 776 ------HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC-------ESHVSTDT 822
+KP I H D+ + N+L+ + +SDFGL+ ++ E + +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 823 ADTIGYVPSEY-------GQAGRANERGDIYSFGVILLELVTGKQPTGP 864
TI Y+ E A ++ D+Y+ G+I E+ P
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 174 bits (444), Expect = 7e-49
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 663 IVFENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ 721
++ V+G G F A K T + + +K+L + + R F E++ + ++H N+++
Sbjct: 12 LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLK 71
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY 781
+G + + EY+ G+L +++ + W +R A A G+++LH
Sbjct: 72 FIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMN 128
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG---- 837
IIH D+ + N L+ + V+DFGLARL+ D ++ + Y G
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 838 ---------RANERGDIYSFGVILLELVTGKQP 861
+E+ D++SFG++L E++
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNA 221
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 174 bits (442), Expect = 9e-49
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEME--TLDMVKHQNLV 720
I +G G + ++G+ + VAVK S + ++ + E E M++H+N++
Sbjct: 10 ITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENIL 65
Query: 721 QLLGYCSVGEEK----LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH- 775
+ L+ Y GSL D+L+ +LD +I A G++ LH
Sbjct: 66 GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHI 123
Query: 776 ----HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV---STDTADTIGY 828
KP I H D+K+ NIL+ + ++D GLA + S + + + T Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 829 VPSE------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869
+ E + +R DI++FG++L E+ G + K
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 1e-48
Identities = 68/394 (17%), Positives = 150/394 (38%), Gaps = 50/394 (12%)
Query: 90 LRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFT 149
L + Q+ P ++L + + ++ + L + + +
Sbjct: 2 AATLATLPAPI-NQIFP-DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA 57
Query: 150 GEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQ 209
+ + L+ L+ +GN + P L +L +L +L + N ++ +S L+NL
Sbjct: 58 S--IQGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD---ISALQNLT 110
Query: 210 SLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISL 269
+L L ++ + +S + NL K+ L LG + + N + L Y+++
Sbjct: 111 NLRELYLNEDNISD--ISPLANLTKMYSLNLG------ANHNLSDLSPLSNMTGLNYLTV 162
Query: 270 SNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEY 329
+ +K+ P + N L ++L+ N + T+L N+I+ P
Sbjct: 163 TESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP-- 216
Query: 330 ISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDL 388
++ + L + N T + P++ N L +N + ++ + + L+ L++
Sbjct: 217 VANMTRLNSLKIGNNKITDLSPLA--NLSQLTWLEIGTNQIS-DIN-AVKDLTKLKMLNV 272
Query: 389 SSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVV 448
SN ++ + NL+ + L LN+N G +L TL L N++
Sbjct: 273 GSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD----- 325
Query: 449 YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT 482
I L+ L+ + + + ++
Sbjct: 326 ------------IR-PLASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 2e-46
Identities = 84/470 (17%), Positives = 154/470 (32%), Gaps = 127/470 (27%)
Query: 114 LKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLN 173
L+ ++ P L L+ S T +++ + L +G +
Sbjct: 2 AATLATLPAPINQIFP--DADLAEGIRAVLQKASVTD--VVTQEELESITKLVVAGEKV- 56
Query: 174 GTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLK 233
+ LT L+ L+L+ N ++ P L NL L+ L + N ++ + NL
Sbjct: 57 -ASIQGIEYLTNLEYLNLNGNQITDISP---LSNLVKLTNLYIGTNKIT--DISALQNLT 110
Query: 234 KLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINL 293
L +LYL + + +S P L N + +NL
Sbjct: 111 NLRELYL-----------------------------NEDNISDISP--LANLTKMYSLNL 139
Query: 294 DGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVS 352
N + T L+ L + +++ P I+ L L L YN + P
Sbjct: 140 GANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-- 194
Query: 353 LWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKL 412
+++ +L N +T P + N+T + LK+
Sbjct: 195 ------------------------LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKI 228
Query: 413 NSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLT 472
+N + P + L L++G+N ++ ++ LT L
Sbjct: 229 GNNKITDLSP--LANLSQLTWLEIGTNQISD------------------INAVKDLTKLK 268
Query: 473 TLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNL 532
LN+ N ++ + ++ L+L +NQL E G L
Sbjct: 269 MLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDMEV----------------IGGL 310
Query: 533 NGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNML 582
LT L LS N + I L +L +++ DF+ ++
Sbjct: 311 TNLTTLFLSQNHITDI---------------RPLASLSKMDSADFANQVI 345
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 8e-45
Identities = 82/449 (18%), Positives = 144/449 (32%), Gaps = 107/449 (23%)
Query: 162 LKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLL 221
+L +N P DL + L ++ + L+++ L V+ +
Sbjct: 2 AATLATLPAPINQIFP--DADLAEGIRAVLQKASVTDVVTQEELESITKL---VVAGEKV 56
Query: 222 SGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT--PEIGNCSMLKYISLSNNKLSGPIP 279
+ I L L L L +IT + N L + + NK++
Sbjct: 57 AS--IQGIEYLTNLEYLNLNGN---------QITDISPLSNLVKLTNLYIGTNKITDISA 105
Query: 280 RELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVF 338
L N +L E+ L+ + +S T + L L N S +S + L
Sbjct: 106 --LQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNL-SDLSPLSNMTGLNYL 160
Query: 339 DLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIP 398
+ + V P I+N L L L+ N + P
Sbjct: 161 TVTESKVKDVTP--------------------------IANLTDLYSLSLNYNQIEDISP 194
Query: 399 KKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLS 458
+ +LT++ N I P + LN+L +G+N +
Sbjct: 195 --LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKIT---------------- 234
Query: 459 GKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSG 518
+ L+ L+ LT L + N ++ D K++ L +G NQ++
Sbjct: 235 -DLSP-LANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISD----------- 279
Query: 519 NKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFS 578
+ NL+ L L L+ N+L +G L L L S
Sbjct: 280 -------ISVLNNLSQLNSLFLNNNQLGNE-------------DMEVIGGLTNLTTLFLS 319
Query: 579 MNMLDGHIPEKLCSLPYLLYLNLADNRLE 607
N + P L SL + + A+ ++
Sbjct: 320 QNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 2e-44
Identities = 75/381 (19%), Positives = 147/381 (38%), Gaps = 60/381 (15%)
Query: 64 SRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQ 123
+ + V+Q S+ L S+ L ++ + + + L L+ L++ NQ
Sbjct: 22 AEGIRAVLQKASVTDV--VTQEELESITKLVVAGEKV-ASIQG-IEYLTNLEYLNLNGNQ 77
Query: 124 LSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDL 183
++ P L L +L + + +N T S L ++ L+ L + + ++ P L +L
Sbjct: 78 ITDISP--LSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYLNEDNISDISP--LANL 131
Query: 184 TQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIG 243
T++ L+L N L L N+ L+YL V+ + + I NL L L L
Sbjct: 132 TKMYSLNLGANHNLSDLSP--LSNMTGLNYLTVTESKVKD--VTPIANLTDLYSLSLN-- 185
Query: 244 PYQLSLFVGRIT--PEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGT 301
+I + + + L Y + N+++ P + N L + + N ++
Sbjct: 186 -------YNQIEDISPLASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL 236
Query: 302 IEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLM 360
+ L+ L + N+IS + +L LK+ ++ N + +
Sbjct: 237 SP--LANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISDISV---------- 282
Query: 361 EFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI 420
++N L L L++N L + + IG LTN+ L L+ N I
Sbjct: 283 ----------------LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326
Query: 421 IPMEFGDCISLNTLDLGSNNL 441
P +++ D + +
Sbjct: 327 RP--LASLSKMDSADFANQVI 345
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 144 bits (367), Expect = 4e-38
Identities = 67/292 (22%), Positives = 127/292 (43%), Gaps = 30/292 (10%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
L NL L L + N + + NL L+ L + E+ +S P L LT++ ++
Sbjct: 82 SPLSNLVKLTNLYIGTNKI--TDISALQNLTNLRELYLNEDNISDISP--LANLTKMYSL 137
Query: 142 SLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201
+L +N + S L ++ L L + + + P + +LT L L L+ N +
Sbjct: 138 NLGANHNLSD-LSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED--- 191
Query: 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT--PEIG 259
+S L +L SL Y N ++ P + N+ +L+ L +G +IT +
Sbjct: 192 ISPLASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIG---------NNKITDLSPLA 240
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319
N S L ++ + N++S + + L +N+ N +S V + + L+ L L N
Sbjct: 241 NLSQLTWLEIGTNQISDINA--VKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNN 296
Query: 320 NRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLE 370
N++ E I L L L N+ T + P++ + + + A+ +++
Sbjct: 297 NQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLA--SLSKMDSADFANQVIK 346
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 1e-48
Identities = 65/229 (28%), Positives = 98/229 (42%), Gaps = 22/229 (9%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKL----SQATGQCDREFAAEMETLDMVKHQN 718
+ E +IG GGF ++ VAVK + Q E + M+KH N
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 719 LVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF 778
++ L G C LV E+ G L+ L + + A ARG+++LH
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEA 125
Query: 779 KPYIIHMDIKTSNILLNDYFE--------AKVSDFGLARLISDCESHVSTDTADTIGYVP 830
IIH D+K+SNIL+ E K++DFGLAR A ++
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT---KMSAAGAYAWMA 182
Query: 831 SEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
E +A ++ D++S+GV+L EL+TG+ P F DG + V
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVP----FRGIDGLAVAYGVA 227
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 2e-48
Identities = 97/534 (18%), Positives = 180/534 (33%), Gaps = 63/534 (11%)
Query: 87 LSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
++++ LDLS N + + L++L + ++++ L LE + L
Sbjct: 25 TAAMKSLDLSFNKI-TYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLPVSL 204
N + S G + LK L+ GN + S +LT LQ L + + +
Sbjct: 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRID 143
Query: 205 LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNC-SM 263
L SL+ L++ L + +++ + L L + + S
Sbjct: 144 FAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLH------LSESAFLLEIFADILSS 197
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323
++Y+ L + L+ L + S ++ F+ L +L + +
Sbjct: 198 VRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVE 257
Query: 324 GSIPEYISELPL-KVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVA 382
+ L + D + V + + + + L LS S
Sbjct: 258 ------FDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEK 311
Query: 383 LEKLDLSSNMLTRQIPKKIG-NLTNIQILKLNSNFFDGIIPME---FGDCISLNTLDLGS 438
++++ + ++ + +P +L +++ L L+ N G SL TL L
Sbjct: 312 VKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQ 370
Query: 439 NNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGL 498
N+L K L L NLT+L++ N +P K++ L
Sbjct: 371 NHLRSM--------------QKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFL 415
Query: 499 YLGHNQLT---GSIPESLGYL--SGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYV 553
L + IP++L L S N L S L L L +S N+L +
Sbjct: 416 NLSSTGIRVVKTCIPQTLEVLDVSNNNL-DSFSL---FLPRLQELYISRNKLKTL----- 466
Query: 554 QSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEK-LCSLPYLLYLNLADNRL 606
P+ L + S N L +P+ L L + L N
Sbjct: 467 ----------PDASLFPVLLVMKISRNQL-KSVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 4e-45
Identities = 96/524 (18%), Positives = 177/524 (33%), Gaps = 71/524 (13%)
Query: 122 NQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLG 181
+ SIPS GL ++++ L N T +L L+ L + +N
Sbjct: 15 RSFT-SIPS--GLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFY 71
Query: 182 DLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSG-NIPPEIGNLKKLSDLYL 240
L L+ LDLSDN LS SL S L SL YL++ N + NL L L +
Sbjct: 72 SLGSLEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRI 130
Query: 241 GIGPYQLSLFVGRITPE-IGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLS 299
G S I + L + + L + L + + + L + +
Sbjct: 131 G-NVETFS----EIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185
Query: 300 GTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENL 359
+E D +++ L L + ++ + ++ F G + +E L
Sbjct: 186 FLLEIFADILSSVRYLELRDTNLA-RFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELL 244
Query: 360 MEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDG 419
L E + ++ L + S + + ++ K I+ L + +
Sbjct: 245 KLLRYILELSE--VEFDDCTLNGLGDFNPSESDVVSELGKV--ETVTIRRLHIPQFYLFY 300
Query: 420 IIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP-GSLSRLTNLTTLNLFG 478
+ + + + + ++ + +P L +L L+L
Sbjct: 301 DLSTVYSLLEKVKRITVENSKVF-----------------LVPCSFSQHLKSLEFLDLSE 343
Query: 479 NLLTGSIPPE---FGDSLKVQGLYLGHNQLTGSIPESLG-----------YLSGNKLYGS 524
NL+ G +Q L L N L S+ ++ +S N
Sbjct: 344 NLMVEEYLKNSACKGAWPSLQTLVLSQNHLR-SMQKTGEILLTLKNLTSLDISRNTF-HP 401
Query: 525 VPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDG 584
+P S + L+LS + + + LE LD S N LD
Sbjct: 402 MPDSCQWPEKMRFLNLSSTGIR--------------VVKTCI--PQTLEVLDVSNNNLD- 444
Query: 585 HIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNK 628
LP L L ++ N+L+ +P + + L ++ ++ N+
Sbjct: 445 SFSL---FLPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQ 484
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 2e-41
Identities = 87/487 (17%), Positives = 175/487 (35%), Gaps = 50/487 (10%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144
++L++L L + + + +L L+ L + +N LS S G L+ L+ ++L
Sbjct: 48 ACANLQVLILKSSRI-NTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLM 106
Query: 145 SNSFTG-EMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQLQDLDLSDNLLSGSLPV 202
N + + S ++ L++L I LT L +L++ L +
Sbjct: 107 GNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR-NYQS 165
Query: 203 SLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCS 262
LK+++ + +L + + + + L + L L L+ F P S
Sbjct: 166 QSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT--NLARFQFSPLPVDEVSS 223
Query: 263 MLKYISLSNNKLS----GPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLV 318
+K ++ + L+ + + L L E+ D L+G + +SEL V
Sbjct: 224 PMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKV 283
Query: 319 NNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEIS 378
+ ++ + + E + ++ +
Sbjct: 284 ET------------VTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQ 331
Query: 379 NAVALEKLDLSSNMLTRQIPKK---IGNLTNIQILKLNSNFFDGI--IPMEFGDCISLNT 433
+ +LE LDLS N++ + K G ++Q L L+ N + +L +
Sbjct: 332 HLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTS 391
Query: 434 LDLGSNNL----NGCVVV---VYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIP 486
LD+ N + C +L L++ + + + L L++ N L S
Sbjct: 392 LDISRNTFHPMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLD-SFS 447
Query: 487 PEFGDSLKVQGLYLGHNQLTGSIPESLG-------YLSGNKLYGSVPTSFGNLNGLTHLD 539
++Q LY+ N+L ++P++ +S N+L F L L +
Sbjct: 448 LFLP---RLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIW 503
Query: 540 LSCNELD 546
L N D
Sbjct: 504 LHTNPWD 510
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 3e-35
Identities = 67/427 (15%), Positives = 140/427 (32%), Gaps = 35/427 (8%)
Query: 80 VSPFLF-NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQ-LGLLT 136
+S F LSSL+ L+L N + NL L+ L +G + I LT
Sbjct: 89 LSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148
Query: 137 RLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLL 196
L + +++ S L I+ + L + + L+ ++ L+L D L
Sbjct: 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNL 208
Query: 197 SG--SLPVSLLKNLQSLSYLDVSNNLLS----GNIPPEIGNLKKLSDLYLGIGPYQLSLF 250
+ P+ + + + L ++L+ + + + +LS++
Sbjct: 209 ARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGD 268
Query: 251 VGRITPEIGNC------SMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIED 304
++ + ++ + + L + + I ++ + +
Sbjct: 269 FNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCS 328
Query: 305 VFDRCTNLSELVLVNNRISGSI---PEYISELP-LKVFDLQYNNFT--GVIPVSLWNSEN 358
+L L L N + P L+ L N+ L +N
Sbjct: 329 FSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKN 388
Query: 359 LMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFD 418
L + + N + + L+LSS + + +++L +++N D
Sbjct: 389 LTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKT--CIPQTLEVLDVSNNNLD 444
Query: 419 GIIPMEFGDCISLNTLDLGSNNLNG------CVVVVYLLLNNNMLSGKIPGSLSRLTNLT 472
+ L L + N L V++ + ++ N L G RLT+L
Sbjct: 445 SF-SLFLP---RLQELYISRNKLKTLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQ 500
Query: 473 TLNLFGN 479
+ L N
Sbjct: 501 KIWLHTN 507
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 1e-28
Identities = 65/405 (16%), Positives = 139/405 (34%), Gaps = 43/405 (10%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144
L+SL L++ L Q +++ + L++ ++ + + +L+ + + LR
Sbjct: 146 GLTSLNELEIKALSL-RNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELR 204
Query: 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLS------- 197
+ S L + + + +L +L L + +
Sbjct: 205 DTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLN 264
Query: 198 --GSLPVSLLKNLQ--------SLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQL 247
G S + ++ L + L ++ L+K+ + +
Sbjct: 265 GLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVE------ 318
Query: 248 SLFVGRITPEIG-NCSMLKYISLSNNKLSGPIPRELCNSG---SLVEINLDGNMLS--GT 301
+ V + + L+++ LS N + + G SL + L N L
Sbjct: 319 NSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQK 378
Query: 302 IEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLM 360
++ NL+ L + N +P+ ++ +L V+ + L
Sbjct: 379 TGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQ--TLE 434
Query: 361 EFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI 420
+ ++N L+ S S + L++L +S N L +P + ++K++ N +
Sbjct: 435 VLDVSNNNLD-SFSLFLPR---LQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSV 488
Query: 421 IPMEFGDCISLNTLDLGSNNLN-GCVVVVYLLLNNNMLSGKIPGS 464
F SL + L +N + C + YL N S K GS
Sbjct: 489 PDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGS 533
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 2e-21
Identities = 54/302 (17%), Positives = 101/302 (33%), Gaps = 30/302 (9%)
Query: 12 SLSFGTFTAIDEPKQERRSLVHFKNSLQNPQVLSGWNKTTRHCHWFGVKCRHSRVVSLVI 71
SF + E + +L + K + L I
Sbjct: 237 DESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSE---LGKVETVTIRRLHI 293
Query: 72 QTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPS 130
L +S L ++ + + + +F + +LK L+ L + EN +
Sbjct: 294 PQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLK 352
Query: 131 Q---LGLLTRLETISLRSNSFT--GEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQ 185
G L+T+ L N + L +K L SLD S N + +P +
Sbjct: 353 NSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEK 411
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPY 245
++ L+LS + + + + L+ LDVSNN L + + L++L
Sbjct: 412 MRFLNLSSTGIR-VVKTCIPQTLE---VLDVSNNNLD-SFSLFLPRLQELY--------- 457
Query: 246 QLSLFVGRIT--PEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE 303
+ ++ P+ +L + +S N+L SL +I L N +
Sbjct: 458 ---ISRNKLKTLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514
Query: 304 DV 305
+
Sbjct: 515 RI 516
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 3e-48
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
I E V+G G F K K VA+K++ + F E+ L V H N+V+L
Sbjct: 10 IEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKL 66
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNR--AASLDWGKRCKIAYGAARGISFLHHGFKP 780
G C LV EY GSL + L ++G+++LH
Sbjct: 67 YGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 781 YIIHMDIKTSNILLN-DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA 839
+IH D+K N+LL K+ DFG A I T+ + ++ E +
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT----HMTNNKGSAAWMAPEVFEGSNY 180
Query: 840 NERGDIYSFGVILLELVTGKQPTGPEFEDKDG 871
+E+ D++S+G+IL E++T ++P F++ G
Sbjct: 181 SEKCDVFSWGIILWEVITRRKP----FDEIGG 208
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 1e-47
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQA--TGQCDREFAAEMETLDMVKHQNLV 720
I IG G F T +KG VAVK L+ T Q + F E+ L +H N++
Sbjct: 26 ITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 721 QLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK 779
+GY + +L +V ++ SL L + K IA ARG+ +LH
Sbjct: 84 LFMGYST--APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---A 138
Query: 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-SHVSTDTADTIGYVPSE---YGQ 835
IIH D+K++NI L++ K+ DFGLA S SH + +I ++ E
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 836 AGRANERGDIYSFGVILLELVTGKQP 861
+ + + D+Y+FG++L EL+TG+ P
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLP 224
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 1e-47
Identities = 99/533 (18%), Positives = 179/533 (33%), Gaps = 89/533 (16%)
Query: 80 VSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLE 139
++P + + L+ + L ++ + N+K ++ + P G +
Sbjct: 3 INPRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 140 TISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGS 199
LR +Q L+ + GL+ ++P L+ L S N L+
Sbjct: 62 VSRLRDCL-----------DRQAHELELNNLGLS-SLPE---LPPHLESLVASCNSLT-E 105
Query: 200 LPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT--PE 257
LP L ++L+SL + + LS P L+ L + ++ PE
Sbjct: 106 LP-ELPQSLKSLLVDNNNLKALSDLPP----LLEY------------LGVSNNQLEKLPE 148
Query: 258 IGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVL 317
+ N S LK I + NN L +P + L I N L E L+ +
Sbjct: 149 LQNSSFLKIIDVDNNSLKK-LPDLPPS---LEFIAAGNNQLEELPE--LQNLPFLTAIYA 202
Query: 318 VNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEI 377
NN + +P+ L+ N L N L A +NLL+ +L
Sbjct: 203 DNNSLK-KLPDLPLS--LESIVAGNNILE--ELPELQNLPFLTTIYADNNLLK-TLPDLP 256
Query: 378 SNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLG 437
+ LE L++ N LT +P+ +LT + + + + + P +L L+
Sbjct: 257 PS---LEALNVRDNYLT-DLPELPQSLTFLDVSENIFSGLSELPP-------NLYYLNAS 305
Query: 438 SNNLN----GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL 493
SN + + L ++NN L ++P L L N L +P +L
Sbjct: 306 SNEIRSLCDLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPELPQ-NL 359
Query: 494 KVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYV 553
K L++ +N L P+ + ++ + L L + N L
Sbjct: 360 KQ--LHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLR------- 409
Query: 554 QSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRL 606
E P + +E L + + + L +
Sbjct: 410 -------EFPDIPES---VEDLRMNSERVVDPYEFAHETTDKLEDDVFEHHHH 452
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 4e-40
Identities = 86/433 (19%), Positives = 144/433 (33%), Gaps = 62/433 (14%)
Query: 87 LSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSN 146
L+L+ L L +L+ L N L+ +P L L +
Sbjct: 70 DRQAHELELNNLGL-SSLPELPPHLESL---VASCNSLT-ELPELPQSLKSLLVDNNNLK 124
Query: 147 SFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLK 206
+ + P L+ L S N L +P L + + L+ +D+ +N L L
Sbjct: 125 ALSDLPPL-------LEYLGVSNNQLE-KLPE-LQNSSFLKIIDVDNNSLK-----KLPD 170
Query: 207 NLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLG--------IGPYQL-SLFVG--RIT 255
SL ++ NN L PE+ NL L+ +Y P L S+ G +
Sbjct: 171 LPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILE 228
Query: 256 --PEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLS 313
PE+ N L I NN L +P + L +N+ N L+ D+ + +L+
Sbjct: 229 ELPELQNLPFLTTIYADNNLLKT-LPDLPPS---LEALNVRDNYLT----DLPELPQSLT 280
Query: 314 ELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSL 373
L + N S + E L + N + +L E N ++N L L
Sbjct: 281 FLDVSENIFS-GLSELPPNL--YYLNASSNEIR-SLCDLP---PSLEELNVSNNKLI-EL 332
Query: 374 SWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNT 433
LE+L S N L ++P+ NL L + N P L
Sbjct: 333 PALPPR---LERLIASFNHLA-EVPELPQNLKQ---LHVEYNPLR-EFPDIPESVEDLRM 384
Query: 434 LDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL 493
+ + L + N L + P + +L + + +
Sbjct: 385 NSHLAEVPELPQNLKQLHVETNPLR-EFPDIPESVEDL---RMNSERVVDPYEFAHETTD 440
Query: 494 KVQGLYLGHNQLT 506
K++ H+
Sbjct: 441 KLEDDVFEHHHHH 453
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 1e-25
Identities = 59/311 (18%), Positives = 106/311 (34%), Gaps = 56/311 (18%)
Query: 349 IPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQ 408
I ++ L E S+ L + E N + + + + R P G +
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 409 ILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL----NGCVVVVYLLLNNNMLSGKIPGS 464
+ +L + L+L + L + L+ + N L+ ++P
Sbjct: 62 VSRLRDCL-----------DRQAHELELNNLGLSSLPELPPHLESLVASCNSLT-ELPEL 109
Query: 465 LSRLTNLTTLNLFGNLLTGSIP---------------PEFGDSLKVQGLYLGHNQLTGSI 509
L +L N L+ P PE +S ++ + + +N L +
Sbjct: 110 PQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KL 168
Query: 510 PESLG-----YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVG-------LYVQSNK 557
P+ N+L NL LT + N L + + +N
Sbjct: 169 PDLPPSLEFIAAGNNQL--EELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNI 226
Query: 558 FYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQ 617
E PEL NL L + N+L +P+ S L LN+ DN L ++P Q
Sbjct: 227 L--EELPELQNLPFLTTIYADNNLL-KTLPDLPPS---LEALNVRDNYLT-DLPEL--PQ 277
Query: 618 NLSIISLTGNK 628
+L+ + ++ N
Sbjct: 278 SLTFLDVSENI 288
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-22
Identities = 49/252 (19%), Positives = 90/252 (35%), Gaps = 39/252 (15%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
P L NL L + NLL L +L+ L + +N L+ +P LT L+
Sbjct: 231 PELQNLPFLTTIYADNNLL-KTLPDLPPSLEALNVR---DNYLT-DLPELPQSLTFLDVS 285
Query: 142 SLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201
+ + L L+ S N + ++ L++L++S+N L LP
Sbjct: 286 ENIFSGLSEL-------PPNLYYLNASSNEIR-SLC---DLPPSLEELNVSNNKLI-ELP 333
Query: 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLS----------DLYLGIGPYQLSLFV 251
L L S N L+ +P NLK+L D+ + +++ +
Sbjct: 334 ALP----PRLERLIASFNHLA-EVPELPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHL 388
Query: 252 GRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTN 311
+ N LK + + N L P S+ ++ ++ + E +
Sbjct: 389 AEVPELPQN---LKQLHVETNPLRE-FPDIP---ESVEDLRMNSERVVDPYEFAHETTDK 441
Query: 312 LSELVLVNNRIS 323
L + V ++
Sbjct: 442 LEDDVFEHHHHH 453
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 4e-47
Identities = 58/227 (25%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEME--TLDMVKHQNLV 720
I IG G + + G + VAVK + + E E +++H+N++
Sbjct: 39 IQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFT---TEEASWFRETEIYQTVLMRHENIL 94
Query: 721 QLLGYCSVGEEK----LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH- 775
+ G L+ +Y NGSL D+L++ +LD K+AY + G+ LH
Sbjct: 95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHT 152
Query: 776 ----HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV---STDTADTIGY 828
KP I H D+K+ NIL+ ++D GLA + V T Y
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212
Query: 829 VPSE------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869
+P E ++ D+YSFG+IL E+ G E +
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ 259
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 6e-47
Identities = 51/226 (22%), Positives = 87/226 (38%), Gaps = 20/226 (8%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKL--SQATGQCDREFAAEMETLDMVKHQNLV 720
+ F + +KG + VK L + + R+F E L + H N++
Sbjct: 12 LNFLTKLNENHSGELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 721 QLLGYCSVGEEKLL--VYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFLHHG 777
+LG C + +M GSL + L +D + K A ARG++FLH
Sbjct: 71 PVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT- 129
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE---YG 834
+P I + + ++++++ A++S + S S +V E
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARISMADVKF------SFQSPGRMYAPAWVAPEALQKK 183
Query: 835 QAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLL 880
D++SF V+L ELVT + P F D + V L
Sbjct: 184 PEDTNRRSADMWSFAVLLWELVTREVP----FADLSNMEIGMKVAL 225
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 166 bits (421), Expect = 2e-45
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 26/222 (11%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEME--TLDMVKHQNLV 720
IV + IG G F ++G + VAVK S + +R + E E M++H+N++
Sbjct: 44 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENIL 99
Query: 721 QLLGYCSVGEEK----LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH- 775
+ + LV +Y +GSL D+L ++ K+A A G++ LH
Sbjct: 100 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHM 157
Query: 776 ----HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV---STDTADTIGY 828
KP I H D+K+ NIL+ ++D GLA + T Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 829 VPSE------YGQAGRANERGDIYSFGVILLELVTGKQPTGP 864
+ E + + +R DIY+ G++ E+ G
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 6e-45
Identities = 41/214 (19%), Positives = 80/214 (37%), Gaps = 21/214 (9%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKL--SQATGQCDREFAAEMETLDMVKHQNLV 720
+ +IG G F + G VA++ + + + F E+ +H+N+V
Sbjct: 35 LEIGELIGKGRFGQVYHGRW--HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
+G C ++ +L +R+ LD K +IA +G+ +LH
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AK 149
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE----SHVSTDTADTIGY-------- 828
I+H D+K+ N+ D + ++DFGL + + + +
Sbjct: 150 GILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208
Query: 829 -VPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
P ++ D+++ G I EL + P
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 158 bits (400), Expect = 2e-41
Identities = 70/559 (12%), Positives = 172/559 (30%), Gaps = 87/559 (15%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
N + +I ++ + L L+ + +K L + N LS + L T+LE ++L S
Sbjct: 8 NGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSS 67
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205
N +L + L++LD + N + L ++ L ++N +S + S
Sbjct: 68 NVLYE--TLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS-RVSCSRG 119
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL------GIGPYQLSLFVGRITPEIG 259
+ ++ + ++NN ++ + G ++ L L + +L
Sbjct: 120 QGKKN---IYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL----------AA 166
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319
+ L++++L N + + ++ + L ++L N L+ + F ++ + L N
Sbjct: 167 SSDTLEHLNLQYNFIYD-VKGQVVFA-KLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRN 223
Query: 320 NRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEIS 378
N++ I + + L+ FDL+ N ++ L +F + + +
Sbjct: 224 NKLV-LIEKALRFSQNLEHFDLRGNG---------FHCGTLRDFFSKNQRV--------- 264
Query: 379 NAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGS 438
++ + + + T + + + + I+L +
Sbjct: 265 -------QTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHAL 317
Query: 439 NNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGL 498
+ + ++ ++ I L
Sbjct: 318 LSG------------QGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITL 365
Query: 499 YLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKF 558
L + + + + G L + E + L ++
Sbjct: 366 EQKKKALDEQVSNGRR------AHAELDGTLQQAVGQIELQHATEEQSPLQLLRAIVKRY 419
Query: 559 -YGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQ 617
+ + + D + L N +L GE +
Sbjct: 420 EEMYVEQQSVQNNAIRDWDMYQHKET-----------QLAEENARLKKLNGEADLALASA 468
Query: 618 NLSIISLTGNKDLCEKIMG 636
N ++ L + +G
Sbjct: 469 NATLQELVVREQNLASQLG 487
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 3e-36
Identities = 68/456 (14%), Positives = 154/456 (33%), Gaps = 33/456 (7%)
Query: 64 SRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQ 123
+R + SLK ++ + +++ LDLS N L + ++ +L++L++ N
Sbjct: 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNV 69
Query: 124 LSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDL 183
L L L+ L T+ L +N EL +++L + N ++ +
Sbjct: 70 LYE--TLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVSCSR--G 119
Query: 184 TQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSG-NIPPEIGNLKKLSDLYLGI 242
+++ L++N ++ L + YLD+ N + N + L L L
Sbjct: 120 QGKKNIYLANNKIT-MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ- 177
Query: 243 GPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTI 302
F+ + ++ + LK + LS+NKL+ + E ++ + I+L N L I
Sbjct: 178 -----YNFIYDVKGQV-VFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LI 229
Query: 303 EDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEF 362
E NL L N +V + + +
Sbjct: 230 EKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLG 289
Query: 363 NAASNLLEGSLSWEISNAVALEKLDLS----SNMLTRQIPKKIGNLTNIQILKLNSNFFD 418
+ + E + +AL++ + + T ++ + N + + +
Sbjct: 290 HYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYR 349
Query: 419 GIIPMEFGDCISLNTLDLGSNNLN-------GCVVVVYLLLNNNMLSGKIPGSLSRLTNL 471
+I + TL+ L+ + L + ++ + + L
Sbjct: 350 TVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEEQSPL 409
Query: 472 TTLNLFGNLLT-GSIPPEFGDSLKVQGLYLGHNQLT 506
L + + + ++ + ++ T
Sbjct: 410 QLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKET 445
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 99.5 bits (248), Expect = 6e-22
Identities = 43/337 (12%), Positives = 95/337 (28%), Gaps = 20/337 (5%)
Query: 79 PVSPFLFNLSSLRILDLSKNLLFGQLS--PQVSNLKRLKMLSVGENQLSGSIPSQLGLLT 136
+ + +L L+L N + +LK L + N+L+ + +
Sbjct: 160 NFAELAASSDTLEHLNLQYN----FIYDVKGQVVFAKLKTLDLSSNKLA-FMGPEFQSAA 214
Query: 137 RLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLN-GTIPSRLGDLTQLQDLDLSDNL 195
+ ISLR+N + L + L+ D GNG + GT+ ++Q +
Sbjct: 215 GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV- 272
Query: 196 LSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT 255
L + + P L L + Q S R+
Sbjct: 273 --KKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSET-ERLE 329
Query: 256 PEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSEL 315
E N + + I + I + + + + L + + L
Sbjct: 330 CERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGT 389
Query: 316 VLVNNRISGSIPEYISELPLKVFDLQYNNFT-GVIPVSLWNSENLMEFNAASNLLEGSLS 374
+ + PL++ + + + + +++ +
Sbjct: 390 LQQAVGQIELQHATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKET---Q 446
Query: 375 WEISNAVA---LEKLDLSSNMLTRQIPKKIGNLTNIQ 408
NA + DL+ + + + N+
Sbjct: 447 LAEENARLKKLNGEADLALASANATLQELVVREQNLA 483
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 1e-20
Identities = 51/249 (20%), Positives = 89/249 (35%), Gaps = 51/249 (20%)
Query: 425 FGDCISLNTLDLGSNNLN--------GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNL 476
+ + ++L V L L+ N LS L+ T L LNL
Sbjct: 6 KQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNL 65
Query: 477 FGNLLTGSIPPEFGDSLKVQGLYLGHNQLT------------------GSIPESLG---- 514
N+L + ++ L L +N + + S G
Sbjct: 66 SSNVLYE--TLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKK 123
Query: 515 --YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVG------------LYVQSNKFYG 560
YL+ NK+ G + + +LDL NE+D + L +Q N Y
Sbjct: 124 NIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY- 182
Query: 561 EIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GICQNL 619
++ ++ +L+ LD S N L + + S + +++L +N+L + ++ QNL
Sbjct: 183 DVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNL 239
Query: 620 SIISLTGNK 628
L GN
Sbjct: 240 EHFDLRGNG 248
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 7e-38
Identities = 49/335 (14%), Positives = 97/335 (28%), Gaps = 41/335 (12%)
Query: 284 NSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYN 343
+S + G S + D + + S + ++
Sbjct: 10 HSSGRENLYFQG---STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGR 66
Query: 344 NFTGVIPVSLWN--SENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI 401
L + + S L + L+ + + + L +P +
Sbjct: 67 ALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLME-LPDTM 123
Query: 402 GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKI 461
++ L L N +P L L + + L + S
Sbjct: 124 QQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTE-------LPEPLASTDA 175
Query: 462 PGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG------- 514
G L NL +L L + S+P + ++ L + ++ L+ ++ ++
Sbjct: 176 SGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEE 233
Query: 515 -YLSGNKLYGSVPTSFGNLNGLTHLDLS-CNELDGIVGLYVQSNKFYGEIPPELGNLVQL 572
L G + P FG L L L C+ L +P ++ L QL
Sbjct: 234 LDLRGCTALRNYPPIFGGRAPLKRLILKDCSNL--------------LTLPLDIHRLTQL 279
Query: 573 EYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLE 607
E LD + +P + LP + + +
Sbjct: 280 EKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 1e-37
Identities = 55/339 (16%), Positives = 106/339 (31%), Gaps = 36/339 (10%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
+ S L + +S +R + +
Sbjct: 6 HHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNNPQIE 61
Query: 142 SLRSNSFTGEMPSELGDIKQ--LKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGS 199
+ + L D Q +L+ L P + L+ LQ + + L
Sbjct: 62 TRTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-E 118
Query: 200 LPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIG 259
LP + ++ L L ++ N L +P I +L +L +L + +L+ + +
Sbjct: 119 LPDT-MQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR-ACPELT----ELPEPLA 171
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319
+ E +L + L+ + ++ NL L + N
Sbjct: 172 STD---------------ASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRN 215
Query: 320 NRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAAS-NLLEGSLSWEI 377
+ +S ++ I LP L+ DL+ P L + L +L +I
Sbjct: 216 SPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL-TLPLDI 273
Query: 378 SNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNF 416
LEKLDL + ++P I L I+ + +
Sbjct: 274 HRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 2e-37
Identities = 46/351 (13%), Positives = 99/351 (28%), Gaps = 43/351 (12%)
Query: 256 PEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSEL 315
+ S + + + P L + + + + N
Sbjct: 6 HHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANS----NNPQIE 61
Query: 316 VLVNNRISGSIPEYISELP---LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGS 372
+ + + + + +L+ P + +L + L
Sbjct: 62 TRTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-E 118
Query: 373 LSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLN 432
L + LE L L+ N L +P I +L ++ L + + +P +
Sbjct: 119 LPDTMQQFAGLETLTLARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDASG 177
Query: 433 TLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDS 492
N + L L + +P S++ L NL +L + + L+ ++ P
Sbjct: 178 EHQGLVN-------LQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHL 228
Query: 493 LKVQGLYLGHNQLTGSIPESLGYLS---------GNKLYGSVPTSFGNLNGLTHLDLSCN 543
K++ L L + P G + + L ++P L L LDL
Sbjct: 229 PKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNL-LTLPLDIHRLTQLEKLDLR-- 285
Query: 544 ELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLP 594
+P + L + ++ + + P
Sbjct: 286 -----------GCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVARP 325
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 4e-36
Identities = 54/382 (14%), Positives = 107/382 (28%), Gaps = 70/382 (18%)
Query: 126 GSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQ 185
GS + E + + ++ L ++ + D + R +
Sbjct: 2 GSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNN 57
Query: 186 LQDLDLSDNLLSGSLPVSLLK-NLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGP 244
Q + L + L L++ + L P + L L + +
Sbjct: 58 PQIETRTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDA-- 113
Query: 245 YQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIED 304
L + + + L+ ++L+ N L +P + +
Sbjct: 114 AGLM----ELPDTMQQFAGLETLTLARNPLRA-LPASIAS-------------------- 148
Query: 305 VFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNA 364
L EL + +PE ++ NL
Sbjct: 149 ----LNRLRELSIRACPELTELPEPLASTDA--------------SGEHQGLVNLQSLRL 190
Query: 365 ASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPME 424
+ SL I+N L+ L + ++ L+ + I +L ++ L L P
Sbjct: 191 EWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPI 248
Query: 425 FGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS 484
FG L L L + + L +P + RLT L L+L G +
Sbjct: 249 FGGRAPLKRLILK---------------DCSNLL-TLPLDIHRLTQLEKLDLRGCVNLSR 292
Query: 485 IPPEFGDSLKVQGLYLGHNQLT 506
+P + + +
Sbjct: 293 LPSLIAQLPANCIILVPPHLQA 314
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 4e-34
Identities = 62/326 (19%), Positives = 101/326 (30%), Gaps = 50/326 (15%)
Query: 309 CTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENL-MEFNAAS 366
+ L + + +S+ D + NS N +E
Sbjct: 11 SSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQA----NSNNPQIETRTGR 66
Query: 367 NLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426
L + E + L+L S L Q P + L+++Q + +++ +P
Sbjct: 67 ALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQ 124
Query: 427 DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIP 486
L TL L N L +P S++ L L L++ +P
Sbjct: 125 QFAGLETLTLARNPLR-----------------ALPASIASLNRLRELSIRACPELTELP 167
Query: 487 PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELD 546
S G + G L SL L + S+P S NL L L + + L
Sbjct: 168 EPLA-STDASGEHQGLVNLQ-----SL-RLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219
Query: 547 GIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLAD-NR 605
+ P + +L +LE LD + P L L L D +
Sbjct: 220 --------------ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSN 265
Query: 606 LEGEVPRS-GICQNLSIISLTGNKDL 630
L +P L + L G +L
Sbjct: 266 LL-TLPLDIHRLTQLEKLDLRGCVNL 290
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 1e-33
Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 19/225 (8%)
Query: 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISL 143
F LS L+ + + L +L + L+ L++ N L ++P+ + L RL +S+
Sbjct: 100 AFRLSHLQHMTIDAAGL-MELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157
Query: 144 RSNSFTGEMPSELGDI---------KQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194
R+ E+P L L+SL G+ ++P+ + +L L+ L + ++
Sbjct: 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNS 216
Query: 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRI 254
LS +L ++ +L L LD+ N PP G L L L L +
Sbjct: 217 PLS-ALGPAI-HHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILK-DCSNLL----TL 269
Query: 255 TPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLS 299
+I + L+ + L +P + + I + ++ +
Sbjct: 270 PLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 7e-27
Identities = 42/214 (19%), Positives = 79/214 (36%), Gaps = 18/214 (8%)
Query: 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLG---------L 134
+ + L L L++N L L +++L RL+ LS+ +P L
Sbjct: 123 MQQFAGLETLTLARNPL-RALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181
Query: 135 LTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194
L L+++ L +P+ + +++ LKSL + L+ + + L +L++LDL
Sbjct: 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGC 239
Query: 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRI 254
+ P L L + + +P +I L +L L L G LS R+
Sbjct: 240 TALRNYPPIF-GGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLR-GCVNLS----RL 293
Query: 255 TPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSL 288
I I + + + +
Sbjct: 294 PSLIAQLPANCIILVPPHLQAQLDQHRPVARPAE 327
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 1e-37
Identities = 78/430 (18%), Positives = 141/430 (32%), Gaps = 99/430 (23%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQL 186
I S L + + + E + K + F + + + L Q+
Sbjct: 12 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 71
Query: 187 QDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGPY 245
+ L+L+D + + ++ L + N + +PP + N+ L+ L
Sbjct: 72 ELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLV------ 123
Query: 246 QLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPREL-CNSGSLVEINLDGNMLSGTIED 304
L N LS +PR + N+ L +++ N L +D
Sbjct: 124 -----------------------LERNDLSS-LPRGIFHNTPKLTTLSMSNNNLERIEDD 159
Query: 305 VFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNA 364
F T+L L L +NR ++ + L + +L N
Sbjct: 160 TFQATTSLQNLQLSSNR--------LTHVDLSLIP------------------SLFHANV 193
Query: 365 ASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPME 424
+ NLL ++ +A+E+LD S N + + + ILKL N
Sbjct: 194 SYNLLS-----TLAIPIAVEELDASHNSIN-VVRG--PVNVELTILKLQHNNLTDT--AW 243
Query: 425 FGDCISLNTLDLGSNNL--------NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNL 476
+ L +DL N L + L ++NN L + + L L+L
Sbjct: 244 LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDL 302
Query: 477 FGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLT 536
N L + +++ LYL HN + ++ + L
Sbjct: 303 SHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLK------------------LSTHHTLK 342
Query: 537 HLDLSCNELD 546
+L LS N+ D
Sbjct: 343 NLTLSHNDWD 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 1e-36
Identities = 70/379 (18%), Positives = 130/379 (34%), Gaps = 32/379 (8%)
Query: 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISL 143
L + + + L K+++ + + + L ++E ++L
Sbjct: 17 LQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNL 76
Query: 144 RSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVS 203
++ L N + P ++ L L L N LS SLP
Sbjct: 77 NDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRG 135
Query: 204 LLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLG---IGPYQLSLFVGRITPEIG 259
+ N L+ L +SNN L I + L +L L + LSL
Sbjct: 136 IFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPS------- 187
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319
L + ++S N LS L ++ E++ N ++ + L+ L L +
Sbjct: 188 ----LFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRG--PVNVELTILKLQH 235
Query: 320 NRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISN 379
N ++ ++ L DL YN ++ + L ++N L +L+
Sbjct: 236 NNLT-DTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQP 293
Query: 380 AVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439
L+ LDLS N L + + ++ L L+ N + + +L L L N
Sbjct: 294 IPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL---KLSTHHTLKNLTLSHN 349
Query: 440 NLNGCVVVVYLLLNNNMLS 458
+ + C + L N +
Sbjct: 350 DWD-CNSLRALFRNVARPA 367
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 7e-36
Identities = 69/416 (16%), Positives = 142/416 (34%), Gaps = 62/416 (14%)
Query: 225 IPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCN 284
I + D+++ + + E + K ++ N+ + L +
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYF-----GFEDITLNNQKIVTFKNSTMRKLPAALLDS 67
Query: 285 SGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYI-SELP-LKVFDLQY 342
+ +NL+ + F + +L + N I +P ++ +P L V L+
Sbjct: 68 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLER 126
Query: 343 NNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEI-SNAVALEKLDLSSNMLTRQIPKKI 401
N+ + + N+ L + ++N LE + + +L+ L LSSN LT + +
Sbjct: 127 NDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLTH-VD--L 182
Query: 402 GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL-----NGCVVVVYLLLNNNM 456
+ ++ ++ N I++ LD N++ V + L L +N
Sbjct: 183 SLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNN 237
Query: 457 LSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE-FGDSLKVQGLYLGHNQLTGSIPESLGY 515
L+ L L ++L N L I F +++ LY+ +N+L
Sbjct: 238 LTD--TAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLV--------- 285
Query: 516 LSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYL 575
++ + L LDLS N L + +LE L
Sbjct: 286 --------ALNLYGQPIPTLKVLDLSHNHLL--------------HVERNQPQFDRLENL 323
Query: 576 DFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLC 631
N + + + L L L+ N + + +N++ ++ C
Sbjct: 324 YLDHNSI-VTLKLS--THHTLKNLTLSHNDWD-CNSLRALFRNVARPAVDDADQHC 375
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 1e-13
Identities = 29/135 (21%), Positives = 56/135 (41%), Gaps = 7/135 (5%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLET 140
+L N L +DLS N L ++ ++RL+ L + N+L ++ + L+
Sbjct: 242 AWLLNYPGLVEVDLSYNEL-EKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKV 299
Query: 141 ISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSL 200
+ L N + +L++L N + T+ L L++L LS N +
Sbjct: 300 LDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLK--LSTHHTLKNLTLSHNDWDCNS 355
Query: 201 PVSLLKNLQSLSYLD 215
+L +N+ + D
Sbjct: 356 LRALFRNVARPAVDD 370
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 6e-04
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 80 VSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLE 139
++ + + +L++LDLS N L + RL+ L + N + ++ L L+
Sbjct: 287 LNLYGQPIPTLKVLDLSHNHL-LHVERNQPQFDRLENLYLDHNSIV-TLK--LSTHHTLK 342
Query: 140 TISLRSNSFT 149
++L N +
Sbjct: 343 NLTLSHNDWD 352
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 3e-36
Identities = 80/441 (18%), Positives = 134/441 (30%), Gaps = 77/441 (17%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-LTQ 185
+P L + + L NS + ++ L+ L I + L+
Sbjct: 24 QVPE---LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSS 80
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLL-SGNIPPEI-GNLKKLSDLYLGIG 243
L L L N L L +L L ++ L + L L L L
Sbjct: 81 LIILKLDYNQFL-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDN 139
Query: 244 PYQLSLFVGRITPEIGNCSM--LKYISLSNNKLSGPIPREL---CNSGSLVEINLDGNML 298
+ +I P +M + L+ NK+ I E + L L
Sbjct: 140 --NIK----KIQPASFFLNMRRFHVLDLTFNKVKS-ICEEDLLNFQGKHFTLLRLSSITL 192
Query: 299 --------SGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP--LKVFDLQYNNFTGV 348
+ T+++ L L N S+ + + K+ L +N +
Sbjct: 193 QDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNM 252
Query: 349 IPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI-GNLTNI 407
+ F N L A ++ DLS + + + K + + T++
Sbjct: 253 GSSFGHTN-----FKDPDNFTFKGLE-----ASGVKTCDLSKSKIFA-LLKSVFSHFTDL 301
Query: 408 QILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP-GSLS 466
+ L L N + I F L L+L N L G I
Sbjct: 302 EQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL-----------------GSIDSRMFE 344
Query: 467 RLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQGLYLGHNQLTGSIPESLGYLSGNKLYGSV 525
L L L+L N + ++ + L ++ L L NQL S+P+ +
Sbjct: 345 NLDKLEVLDLSYNHIR-ALGDQSFLGLPNLKELALDTNQLK-SVPDGI------------ 390
Query: 526 PTSFGNLNGLTHLDLSCNELD 546
F L L + L N D
Sbjct: 391 ---FDRLTSLQKIWLHTNPWD 408
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 1e-24
Identities = 74/349 (21%), Positives = 124/349 (35%), Gaps = 47/349 (13%)
Query: 287 SLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYI-SELP-LKVFDLQYNN 344
+ ++L N ++ E F R +L L + I L L + L YN
Sbjct: 31 HVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90
Query: 345 FTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAV-----ALEKLDLSSNMLTRQIPK 399
F + + NL L+ +S +LE L L N + + P
Sbjct: 91 FLQLETGAFNGLANLEVLTLTQCNLD---GAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA 147
Query: 400 KI-GNLTNIQILKLNSNFFDGIIPMEFGDCISLN--TLDLGSNNLNGCVVVVYLLLNNNM 456
N+ +L L N I + + + L L S L +N
Sbjct: 148 SFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITL--------QDMNEYW 199
Query: 457 LSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL---KVQGLYLGHNQLTGSIPESL 513
L + G+ + T++TTL+L GN S+ F D++ K+Q L L ++ GS
Sbjct: 200 LGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGS----- 254
Query: 514 GYLSGNKLYGSVPTSFGNL--NGLTHLDLSCNELDGI-----------VGLYVQSNKFYG 560
+F L +G+ DLS +++ + L + N+
Sbjct: 255 -SFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEI-N 312
Query: 561 EIPPE-LGNLVQLEYLDFSMNMLDGHIPEKLC-SLPYLLYLNLADNRLE 607
+I L L L+ S N L G I ++ +L L L+L+ N +
Sbjct: 313 KIDDNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIR 360
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 3e-16
Identities = 43/276 (15%), Positives = 76/276 (27%), Gaps = 42/276 (15%)
Query: 387 DLSSNMLTR--QIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN-- 442
+ L + ++P ++ + L+ N + F L L +
Sbjct: 16 ICINRGLHQVPELP------AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLV 69
Query: 443 -------GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE--FGDSL 493
G ++ L L+ N G+ + L NL L L L G++ F
Sbjct: 70 IRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLT 129
Query: 494 KVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYV 553
++ L L N + P S F N+ LDL+ N++ I
Sbjct: 130 SLEMLVLRDNNIKKIQPASF---------------FLNMRRFHVLDLTFNKVKSI----- 169
Query: 554 QSNKFYGEIPPELG--NLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVP 611
L + D + L + L+L+ N + E
Sbjct: 170 CEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFK-ESM 228
Query: 612 RSGICQNLSIISLTGNKDLCEKIMGSDCQILTFGKL 647
++ + MGS F
Sbjct: 229 AKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDP 264
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 5e-16
Identities = 67/341 (19%), Positives = 121/341 (35%), Gaps = 67/341 (19%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV--SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISL 143
L+SL +L L N + ++ P N++R +L + N++ SI L +
Sbjct: 127 PLTSLEMLVLRDNNIK-KIQPASFFLNMRRFHVLDLTFNKVK-SICE--EDLLNFQGKHF 182
Query: 144 RSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVS 203
+ + D + L T + LDLS N S+
Sbjct: 183 TLL-----------RLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKR 231
Query: 204 L--LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNC 261
+ L +SN+ G+ N K + T +
Sbjct: 232 FFDAIAGTKIQSLILSNSYNMGSSFGH-TNFKDPDNF----------------TFKGLEA 274
Query: 262 SMLKYISLSNNKLSGPIPRELCNS-GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNN 320
S +K LS +K+ + + + + L ++ L N ++ ++ F T+L +L L N
Sbjct: 275 SGVKTCDLSKSKIFA-LLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN 333
Query: 321 RISGSIPEYI-SELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEIS 378
+ SI + L L+V DL YN+ + + L
Sbjct: 334 FLG-SIDSRMFENLDKLEVLDLSYNHIR-ALGD-----------QSFLGL---------- 370
Query: 379 NAVALEKLDLSSNMLTRQIPKKI-GNLTNIQILKLNSNFFD 418
L++L L +N L +P I LT++Q + L++N +D
Sbjct: 371 --PNLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWD 408
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 3e-14
Identities = 51/268 (19%), Positives = 91/268 (33%), Gaps = 41/268 (15%)
Query: 83 FLFNLSSLRILDLSKNLL----------FGQLSPQVSNLKRLKMLSVGENQLSGSIPSQL 132
F N+ +LDL+ N + F + L + + + E L
Sbjct: 149 FFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNP 208
Query: 133 GLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLG----------- 181
T + T+ L N F M D + + + S G
Sbjct: 209 FKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFT 268
Query: 182 ----DLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLS 236
+ + ++ DLS + + +L S+ + L L ++ N ++ I L L
Sbjct: 269 FKGLEASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHLL 326
Query: 237 DLYLG---IGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNS-GSLVEIN 292
L L +G +F L+ + LS N + + + +L E+
Sbjct: 327 KLNLSQNFLGSIDSRMFEN--------LDKLEVLDLSYNHIRA-LGDQSFLGLPNLKELA 377
Query: 293 LDGNMLSGTIEDVFDRCTNLSELVLVNN 320
LD N L + +FDR T+L ++ L N
Sbjct: 378 LDTNQLKSVPDGIFDRLTSLQKIWLHTN 405
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 6e-36
Identities = 73/380 (19%), Positives = 129/380 (33%), Gaps = 66/380 (17%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQL 186
+I R + + +S + S +K LD SGN L+ + L T+L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 187 QDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQ 246
+ L+LS N+L +L + L L+ LD++NN + E+ + L+
Sbjct: 61 ELLNLSSNVLYETLDLESLSTLR---TLDLNNNYVQ-----ELLVGPSIETLHAA----- 107
Query: 247 LSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSG-TIEDV 305
+ + R++ G K I L+NNK++ + + ++L N + ++
Sbjct: 108 -NNNISRVSCSRG--QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL 164
Query: 306 FDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAA 365
L L L N I + + LK DL N
Sbjct: 165 AASSDTLEHLNLQYNFIY-DVKGQVVFAKLKTLDLSSNKLA------------------- 204
Query: 366 SNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEF 425
+ E +A + + L +N L I K + N++ L N F
Sbjct: 205 ------FMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGF-------- 249
Query: 426 GDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSI 485
C +L + + + + K+ G + TL +G +
Sbjct: 250 -HCGTLRDFFSKNQRV--------QTVAKQTVK-KLTGQNEEECTVPTLGHYGAYCCEDL 299
Query: 486 PPEFGDSLKVQGLYLGHNQL 505
P F D L + LGH+
Sbjct: 300 PAPFADRL----IALGHHHH 315
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 9e-36
Identities = 55/318 (17%), Positives = 124/318 (38%), Gaps = 22/318 (6%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
N + +I ++ + L L+ + +K L + N LS + L T+LE ++L S
Sbjct: 8 NGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSS 67
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205
N +L + L++LD + N + L ++ L ++N +S + S
Sbjct: 68 NVLY--ETLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS-RVSCSRG 119
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLK 265
+ ++ + ++NN ++ + G ++ L L + + L+
Sbjct: 120 QGKKN---IYLANNKITMLRDLDEGCRSRVQYLDL----KLNEIDTVNFAELAASSDTLE 172
Query: 266 YISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGS 325
+++L N + + ++ + L ++L N L+ + F ++ + L NN++
Sbjct: 173 HLNLQYNFIYD-VKGQVVFA-KLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-L 228
Query: 326 IPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE 384
I + + L+ FDL+ N F + + S+N A ++ L+ + +
Sbjct: 229 IEKALRFSQNLEHFDLRGNGFHC-GTLRDFFSKNQRVQTVAKQTVK-KLTGQNEEECTVP 286
Query: 385 KLDLSSNMLTRQIPKKIG 402
L +P
Sbjct: 287 TLGHYGAYCCEDLPAPFA 304
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 7e-35
Identities = 60/345 (17%), Positives = 112/345 (32%), Gaps = 60/345 (17%)
Query: 258 IGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVL 317
N + K ++++ L + ++ ++ E++L GN LS T L L L
Sbjct: 6 KQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNL 65
Query: 318 VNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWE 376
+N + + + L L+ DL N L ++ +AA+N +
Sbjct: 66 SSNVLY-ETLD-LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS---RVS 115
Query: 377 ISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI-IPMEFGDCISLNTLD 435
S + + L++N +T G + +Q L L N D + +L L+
Sbjct: 116 CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175
Query: 436 LGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKV 495
L N + + G + L TL+L N L + PEF + V
Sbjct: 176 LQYNFIY-----------------DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGV 216
Query: 496 QGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQS 555
+ L +N+L + + L H DL N
Sbjct: 217 TWISLRNNKLV-----------------LIEKALRFSQNLEHFDLRGNGFHCG------- 252
Query: 556 NKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLN 600
+ +++ + E+ C++P L +
Sbjct: 253 -----TLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYG 292
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 3e-34
Identities = 52/280 (18%), Positives = 99/280 (35%), Gaps = 34/280 (12%)
Query: 372 SLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISL 431
++ N + ++ + L + + + N++ L L+ N I + L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 432 NTLDLGSNNL------NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSI 485
L+L SN L + L LNNN + L ++ TL+ N ++ +
Sbjct: 61 ELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RV 114
Query: 486 PPEFGDSLKVQGLYLGHNQLTGSIPESLG--------YLSGNKLYG-SVPTSFGNLNGLT 536
G K +YL +N++T G L N++ + + + L
Sbjct: 115 SCSRGQGKKN--IYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLE 172
Query: 537 HLDLSCNELDGIVG---------LYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIP 587
HL+L N + + G L + SNK + PE + + ++ N L I
Sbjct: 173 HLNLQYNFIYDVKGQVVFAKLKTLDLSSNKL-AFMGPEFQSAAGVTWISLRNNKLV-LIE 230
Query: 588 EKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGN 627
+ L L + +L N R +N + ++
Sbjct: 231 KALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-25
Identities = 45/265 (16%), Positives = 92/265 (34%), Gaps = 24/265 (9%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
L +LS+LR LDL+ N + ++ ++ L N +S + + I
Sbjct: 74 LDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS-RVSC--SRGQGKKNI 125
Query: 142 SLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSL 200
L +N T + G +++ LD N ++ L+ L+L N + +
Sbjct: 126 YLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DV 184
Query: 201 PVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGN 260
+ L LD+S+N L+ + PE + ++ + L +L I +
Sbjct: 185 KGQV--VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNN--KLV----LIEKALRF 235
Query: 261 CSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNN 320
L++ L N R+ S + + + + CT + L
Sbjct: 236 SQNLEHFDLRGNGFHCGTLRDF-FSKNQRVQTVAKQTVKKLTGQNEEECT-VPTLGHYGA 293
Query: 321 RISGSIPEYISELPLKVFDLQYNNF 345
+P ++ L +++
Sbjct: 294 YCCEDLPA---PFADRLIALGHHHH 315
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 9e-21
Identities = 38/215 (17%), Positives = 75/215 (34%), Gaps = 29/215 (13%)
Query: 430 SLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEF 489
+++ + N + ++ L + N+ L+L GN L+ +
Sbjct: 1 AIHEIKQNGNRYK------IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADL 54
Query: 490 GDSLKVQGLYLGHNQLTGSIPESLG-------YLSGNKLYGSVPTSFGNLNGLTHLDLSC 542
K++ L L N L + L+ N + + L +
Sbjct: 55 APFTKLELLNLSSNVLY-ETLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAAN 108
Query: 543 NELDGI--------VGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDG-HIPEKLCSL 593
N + + +Y+ +NK + G +++YLD +N +D + E S
Sbjct: 109 NNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS 168
Query: 594 PYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNK 628
L +LNL N + +V + L + L+ NK
Sbjct: 169 DTLEHLNLQYNFIY-DVKGQVVFAKLKTLDLSSNK 202
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 3e-13
Identities = 27/165 (16%), Positives = 51/165 (30%), Gaps = 12/165 (7%)
Query: 79 PVSPFLFNLSSLRILDLSKNLLFGQLS--PQVSNLKRLKMLSVGENQLSGSIPSQLGLLT 136
+ + +L L+L N + +LK L + N+L+ + +
Sbjct: 160 NFAELAASSDTLEHLNLQYN----FIYDVKGQVVFAKLKTLDLSSNKLA-FMGPEFQSAA 214
Query: 137 RLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLN-GTIPSRLGDLTQLQDLDLSDNL 195
+ ISLR+N + L + L+ D GNG + GT+ ++Q +
Sbjct: 215 GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVK 273
Query: 196 LSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL 240
L + + P L L +
Sbjct: 274 ---KLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALGHHHH 315
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 3e-35
Identities = 75/428 (17%), Positives = 136/428 (31%), Gaps = 95/428 (22%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQL 186
I S L + + + E + K + F + + + L Q+
Sbjct: 18 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 77
Query: 187 QDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQ 246
+ L+L+D + + ++ L + N + +PP +
Sbjct: 78 ELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIR-YLPPHV----------------- 118
Query: 247 LSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVF 306
N +L + L N LS N+ L +++ N L +D F
Sbjct: 119 -----------FQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 167
Query: 307 DRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAAS 366
T+L L L +NR ++ + L + +L N +
Sbjct: 168 QATTSLQNLQLSSNR--------LTHVDLSLI------------------PSLFHANVSY 201
Query: 367 NLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426
NLL ++ +A+E+LD S N + + + ILKL N
Sbjct: 202 NLLS-----TLAIPIAVEELDASHNSIN-VVRG--PVNVELTILKLQHNNLTDT--AWLL 251
Query: 427 DCISLNTLDLGSNNL--------NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFG 478
+ L +DL N L + L ++NN L + + L L+L
Sbjct: 252 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSH 310
Query: 479 NLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHL 538
N L + +++ LYL HN + ++ + L +L
Sbjct: 311 NHLL-HVERNQPQFDRLENLYLDHNSIV-TLK------------------LSTHHTLKNL 350
Query: 539 DLSCNELD 546
LS N+ D
Sbjct: 351 TLSHNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 6e-34
Identities = 75/377 (19%), Positives = 137/377 (36%), Gaps = 37/377 (9%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
+ + I ++++ FG + L K+++ + + + L ++E +
Sbjct: 24 QYDCVFYDVHIDMQTQDVYFG---FEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELL 80
Query: 142 SLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201
+L ++ L N + P ++ L L L N LS SLP
Sbjct: 81 NLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLP 139
Query: 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLG---IGPYQLSLFVGRITPE 257
+ N L+ L +SNN L I + L +L L + LSL
Sbjct: 140 RGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPS----- 193
Query: 258 IGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVL 317
L + ++S N LS L ++ E++ N ++ V L+ L L
Sbjct: 194 ------LFHANVSYNLLS-----TLAIPIAVEELDASHNSINVVRGPVN---VELTILKL 239
Query: 318 VNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWE 376
+N ++ + P L DL YN ++ + L ++N L +L+
Sbjct: 240 QHNNLT-DTAW-LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLY 296
Query: 377 ISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDL 436
L+ LDLS N L + + ++ L L+ N I+ ++ +L L L
Sbjct: 297 GQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNS---IVTLKLSTHHTLKNLTL 352
Query: 437 GSNNLNGCVVVVYLLLN 453
N+ + C + L N
Sbjct: 353 SHNDWD-CNSLRALFRN 368
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 1e-33
Identities = 52/352 (14%), Positives = 127/352 (36%), Gaps = 31/352 (8%)
Query: 71 IQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIP 129
I Q+ L++ +I+ + + +L + + +++++L++ + Q+
Sbjct: 34 IDMQTQDVYFGFEDITLNNQKIVTFKNSTM-RKLPAALLDSFRQVELLNLNDLQIEEIDT 92
Query: 130 SQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRL-GDLTQLQD 188
++ + + N+ P ++ L L N L+ ++P + + +L
Sbjct: 93 YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTT 151
Query: 189 LDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLS 248
L +S+N L + + SL L +S+N L+ ++ + L +
Sbjct: 152 LSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HVDL--SLIPSLFHANVS------- 200
Query: 249 LFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDR 308
++ + ++ + S+N ++ + + L + L N L+ T
Sbjct: 201 --YNLLS-TLAIPIAVEELDASHNSINV-VRGPVNV--ELTILKLQHNNLTDT--AWLLN 252
Query: 309 CTNLSELVLVNNRISGSIPEYI-SELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAAS 366
L E+ L N + I + ++ L+ + N + + L + +
Sbjct: 253 YPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSH 310
Query: 367 NLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFD 418
N L + LE L L N + + + ++ L L+ N +D
Sbjct: 311 NHLL-HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWD 358
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 3e-35
Identities = 83/391 (21%), Positives = 138/391 (35%), Gaps = 70/391 (17%)
Query: 160 KQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNN 219
L+ +GL T+P L + L + DN L+ SL L L+VS N
Sbjct: 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-----SLPALPPELRTLEVSGN 91
Query: 220 LLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIP 279
L+ ++P L +LS + + L + + N+L+ +P
Sbjct: 92 QLT-SLPVLPPGLLELSIFSNPLT---------HLPALPSG---LCKLWIFGNQLTS-LP 137
Query: 280 RELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFD 339
L E+++ N L+ + + L +L NN+++ S+P S L +
Sbjct: 138 VLP---PGLQELSVSDNQLA----SLPALPSELCKLWAYNNQLT-SLPMLPSGL--QELS 187
Query: 340 LQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPK 399
+ N +P L +N N L SL S L++L +S N LT +P
Sbjct: 188 VSDNQLA-SLPTLPSELYKLWAYN---NRLT-SLPALPSG---LKELIVSGNRLT-SLPV 238
Query: 400 KIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSG 459
L L ++ N +PM +SL+ + N L+
Sbjct: 239 LPSELKE---LMVSGNRLT-SLPMLPSGLLSLS-------------------VYRNQLT- 274
Query: 460 KIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLG----HNQLTGSIPESLGY 515
++P SL L++ TT+NL GN L+ + + Y G + S P
Sbjct: 275 RLPESLIHLSSETTVNLEGNPLS-ERTLQALREITSAPGYSGPIIRFDMAGASAPRETRA 333
Query: 516 LSGNKLYGSVPTSFGNLNGLTHLDLSCNELD 546
L VP G + E +
Sbjct: 334 LHLAAADWLVPAREGEPAPADRWHMFGQEDN 364
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 139 bits (351), Expect = 2e-34
Identities = 79/437 (18%), Positives = 147/437 (33%), Gaps = 78/437 (17%)
Query: 87 LSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSN 146
+ +L++ ++ L ++P L + T+ + N
Sbjct: 39 NNGNAVLNVGESGL-------------------------TTLPDCLP--AHITTLVIPDN 71
Query: 147 SFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLK 206
+ T +P+ +L++L+ SGN L ++P L +L L +L
Sbjct: 72 NLT-SLPALPP---ELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTHLP-----ALPS 121
Query: 207 NLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKY 266
L L + N L+ ++P L++LS + + L
Sbjct: 122 GLCK---LWIFGNQLT-SLPVLPPGLQELSVSDNQL---------ASLPALPSE---LCK 165
Query: 267 ISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSI 326
+ NN+L+ +P L E+++ N L+ ++ + + L +L NNR++ S+
Sbjct: 166 LWAYNNQLTS-LPMLP---SGLQELSVSDNQLA-SLPTLP---SELYKLWAYNNRLT-SL 216
Query: 327 PEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKL 386
P S LK + N T +PV L E + N L SL S L L
Sbjct: 217 PALPSG--LKELIVSGNRLTS-LPVLP---SELKELMVSGNRLT-SLPMLPSG---LLSL 266
Query: 387 DLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVV 446
+ N LTR +P+ + +L++ + L N ++ I+ G
Sbjct: 267 SVYRNQLTR-LPESLIHLSSETTVNLEGNPLS-ERTLQALREITSAPGYSGPIIRFDMAG 324
Query: 447 V----VYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGH 502
L+ +P ++FG F D L ++
Sbjct: 325 ASAPRETRALHLAAADWLVPAREGEPAPADRWHMFGQEDNADAFSLFLDRLSETENFIKD 384
Query: 503 NQLTGSIPESLGYLSGN 519
I L L+ +
Sbjct: 385 AGFKAQISSWLAQLAED 401
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 4e-33
Identities = 74/365 (20%), Positives = 123/365 (33%), Gaps = 75/365 (20%)
Query: 281 ELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDL 340
C + +N+ + L+ + + +++ LV+ +N ++ S+P E L+ ++
Sbjct: 35 RACLNNGNAVLNVGESGLTTLPDCLP---AHITTLVIPDNNLT-SLPALPPE--LRTLEV 88
Query: 341 QYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKK 400
N T +PV L F+ L S L KL + N LT +P
Sbjct: 89 SGNQLT-SLPVLPPGLLELSIFSNPLTHLPALPS-------GLCKLWIFGNQLTS-LPVL 139
Query: 401 IGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGK 460
L L ++ N +P L L +N L
Sbjct: 140 PPGLQE---LSVSDNQLAS-LPALPS---ELCKLWAYNNQLT-----------------S 175
Query: 461 IPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG-----Y 515
+P + L L++ N L S+P ++ L+ +N+LT S+P
Sbjct: 176 LPML---PSGLQELSVSDNQLA-SLPTLPS---ELYKLWAYNNRLT-SLPALPSGLKELI 227
Query: 516 LSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYL 575
+SGN+L S+P L L +S N L +P L L
Sbjct: 228 VSGNRL-TSLPVLPSE---LKELMVSGNRLT--------------SLPMLPSG---LLSL 266
Query: 576 DFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIM 635
N L +PE L L +NL N L E + + S +G +
Sbjct: 267 SVYRNQLT-RLPESLIHLSSETTVNLEGNPLS-ERTLQALREITSAPGYSGPIIRFDMAG 324
Query: 636 GSDCQ 640
S +
Sbjct: 325 ASAPR 329
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 128 bits (322), Expect = 8e-31
Identities = 63/336 (18%), Positives = 107/336 (31%), Gaps = 49/336 (14%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
LR L++S N L L L L + S L L + L + +
Sbjct: 79 LPPELRTLEVSGNQL-TSLPVLPPGLLELSIFSNPLTHLP-------ALPSGLCKLWIFG 130
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205
N T +P L+ L S N L ++P+ +L L +N L+ SL
Sbjct: 131 NQLT-SLPVLPP---GLQELSVSDNQLA-SLPALPS---ELCKLWAYNNQLT-----SLP 177
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLK 265
L L VS+N L+ ++P L KL +L+ + LK
Sbjct: 178 MLPSGLQELSVSDNQLA-SLPTLPSELYKLWAYNN-----RLT----SLPALPSG---LK 224
Query: 266 YISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGS 325
+ +S N+L+ +P L E+ + GN L + + L L + N+++
Sbjct: 225 ELIVSGNRLTS-LPVLP---SELKELMVSGNRL----TSLPMLPSGLLSLSVYRNQLT-R 275
Query: 326 IPEYISELP-LKVFDLQYNNFTGV---IPVSLWNSENLMEFNAASNLLEGSLSWEISNAV 381
+PE + L +L+ N + + ++ ++ S E
Sbjct: 276 LPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALH 335
Query: 382 ALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFF 417
L P F
Sbjct: 336 LAAADWLVPAREGEPAP--ADRWHMFGQEDNADAFS 369
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 6e-35
Identities = 59/207 (28%), Positives = 89/207 (42%), Gaps = 15/207 (7%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKT-VAVKKLSQATGQCDR-EFAAEMETLDMVKHQNLV 720
+V IG G F F G + T VAVK + + +F E L H N+V
Sbjct: 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
+L+G C+ + +V E + G +LR A L ++ AA G+ +L K
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES--KC 233
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP-----SEYGQ 835
IH D+ N L+ + K+SDFG++R +D S VP E
Sbjct: 234 C-IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL----RQVPVKWTAPEALN 288
Query: 836 AGRANERGDIYSFGVILLELVT-GKQP 861
GR + D++SFG++L E + G P
Sbjct: 289 YGRYSSESDVWSFGILLWETFSLGASP 315
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 1e-34
Identities = 63/323 (19%), Positives = 121/323 (37%), Gaps = 21/323 (6%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQ 185
++P G+ T + L N E L+ L+ + N + + +L
Sbjct: 25 AVPE--GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIV-SAVEPGAFNNLFN 81
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLG--- 241
L+ L L N L +P+ + L +L+ LD+S N + + + +L L L +G
Sbjct: 82 LRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVGDND 139
Query: 242 IGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRE-LCNSGSLVEINLDGNMLSG 300
+ F G + L+ ++L L+ IP E L + L+ + L ++
Sbjct: 140 LVYISHRAFSG--------LNSLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRHLNINA 190
Query: 301 TIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENL 359
+ F R L L + + ++ L + + N T V +++ + L
Sbjct: 191 IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250
Query: 360 MEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDG 419
N + N + + + L+++ L L P L +++L ++ N
Sbjct: 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTT 310
Query: 420 IIPMEFGDCISLNTLDLGSNNLN 442
+ F +L TL L SN L
Sbjct: 311 LEESVFHSVGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 2e-33
Identities = 67/356 (18%), Positives = 113/356 (31%), Gaps = 55/356 (15%)
Query: 267 ISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSI 326
+ + +P + ++L N + +D F +L EL L N +S ++
Sbjct: 16 VLCHRKRFVA-VPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVS-AV 71
Query: 327 PEYI-SELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEI-SNAVAL 383
+ L L+ L+ N + NL + + + N + L + + L
Sbjct: 72 EPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNL 130
Query: 384 EKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNG 443
+ L++ N L + L +++ L L I L L L N+N
Sbjct: 131 KSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN- 189
Query: 444 CVVVVYLLLNNNMLSGKIP-GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGH 502
I S RL L L + ++ P L + L + H
Sbjct: 190 ----------------AIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITH 233
Query: 503 NQLTGSIP----------ESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLY 552
LT ++P L LS N + + L L + L +L
Sbjct: 234 CNLT-AVPYLAVRHLVYLRFL-NLSYNPISTIEGSMLHELLRLQEIQLVGGQLA------ 285
Query: 553 VQSNKFYGEIPPE-LGNLVQLEYLDFSMNMLDGHIPEKLC-SLPYLLYLNLADNRL 606
+ P L L L+ S N L + E + S+ L L L N L
Sbjct: 286 --------VVEPYAFRGLNYLRVLNVSGNQLT-TLEESVFHSVGNLETLILDSNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 7e-31
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 19/293 (6%)
Query: 84 LFNLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQ-LGLLTRLETI 141
+ L L+L++N++ + P +NL L+ L + N+L IP L+ L +
Sbjct: 52 FASFPHLEELELNENIV-SAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKL 109
Query: 142 SLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQLQDLDLSDNLLSGSL 200
+ N + D+ LKSL+ N L I R L L+ L L L+ S+
Sbjct: 110 DISENKIVILLDYMFQDLYNLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLT-SI 167
Query: 201 PVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGPYQLSLFVGRITPEIG 259
P L +L L L + + ++ I L +L L + P ++ +TP
Sbjct: 168 PTEALSHLHGLIVLRLRHLNIN-AIRDYSFKRLYRLKVLEISHWP-----YLDTMTPNCL 221
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNS-GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLV 318
L +S+++ L+ +P L +NL N +S + L E+ LV
Sbjct: 222 YGLNLTSLSITHCNLTA-VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLV 280
Query: 319 NNRISGSIPEYI-SELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLL 369
+++ + Y L L+V ++ N T + + NL SN L
Sbjct: 281 GGQLA-VVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 1e-18
Identities = 45/217 (20%), Positives = 83/217 (38%), Gaps = 36/217 (16%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144
L+SL L L K L + + S+L L +L + ++ L RL+ + +
Sbjct: 150 GLNSLEQLTLEKCNL-TSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS 208
Query: 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQLQDLDLSDNLLSGSLPVS 203
+ M L SL + L +P + L L+ L+LS N +S ++ S
Sbjct: 209 HWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPIS-TIEGS 266
Query: 204 LLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSM 263
+L L L + + L+ + P L +
Sbjct: 267 MLHELLRLQEIQLVGGQLA-VVEPYA-----FRGL-----------------------NY 297
Query: 264 LKYISLSNNKLSGPIPRELCNS-GSLVEINLDGNMLS 299
L+ +++S N+L+ + + +S G+L + LD N L+
Sbjct: 298 LRVLNVSGNQLTT-LEESVFHSVGNLETLILDSNPLA 333
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 1e-34
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 7/201 (3%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ F +G G F G Q VA+K + + + D EF E + + + H+ LVQL
Sbjct: 26 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQL 84
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-HHGFKPY 781
G C+ ++ EYM NG L ++LR + ++ + +L F
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 141
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
+H D+ N L+ND KVSDFGL+R + D E S + + + P E + +
Sbjct: 142 -LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 842 RGDIYSFGVILLELVT-GKQP 861
+ DI++FGV++ E+ + GK P
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMP 221
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 2e-34
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 7/201 (3%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ F IG G F G ++ VA+K + + + +F E E + + H LVQL
Sbjct: 10 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQL 68
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-HHGFKPY 781
G C LV E+M +G L D+LR + + G+++L
Sbjct: 69 YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV--- 125
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
IH D+ N L+ + KVSDFG+ R + D + ST T + + E R +
Sbjct: 126 -IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 842 RGDIYSFGVILLELVT-GKQP 861
+ D++SFGV++ E+ + GK P
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIP 205
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 2e-34
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 7/201 (3%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
I +G G F G Q VAVK + + + + EF E +T+ + H LV+
Sbjct: 10 ITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKF 68
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-HHGFKPY 781
G CS +V EY+ NG L ++LR+ L+ + ++ Y G++FL H F
Sbjct: 69 YGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF--- 125
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
IH D+ N L++ KVSDFG+ R + D + S T + + E + +
Sbjct: 126 -IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSS 184
Query: 842 RGDIYSFGVILLELVT-GKQP 861
+ D+++FG+++ E+ + GK P
Sbjct: 185 KSDVWAFGILMWEVFSLGKMP 205
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 3e-34
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKT-VAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ 721
I ++ +GGG + ++G VAVK L + T + + EF E + +KH NLVQ
Sbjct: 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 280
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFLH-HGFK 779
LLG C+ ++ E+M G+L D+LR + +A + + +L F
Sbjct: 281 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF- 339
Query: 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA 839
IH ++ N L+ + KV+DFGL+RL++ I + E +
Sbjct: 340 ---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 396
Query: 840 NERGDIYSFGVILLELVT-GKQP 861
+ + D+++FGV+L E+ T G P
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSP 419
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 5e-34
Identities = 76/462 (16%), Positives = 156/462 (33%), Gaps = 78/462 (16%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
N +S + L L L + ++ + + LT L + S
Sbjct: 19 NFASEVAAAFEMQAT---DTISEEQLATLTSLDCHNSSIT-DMTG-IEKLTGLTKLICTS 73
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205
N+ T +L L L N L + + LT+L L+ N L+ L VS
Sbjct: 74 NNITTL---DLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLT-KLDVSQN 126
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLK 265
L YL+ + N L+ ++ + +L++L L ++ + L
Sbjct: 127 PLLT---YLNCARNTLT---EIDVSHNTQLTELD-------CHLNKKITKLDVTPQTQLT 173
Query: 266 YISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGS 325
+ S NK++ ++ + L +N D N ++ ++ ++ L+ L +N+++
Sbjct: 174 TLDCSFNKITEL---DVSQNKLLNRLNCDTNNIT-KLD--LNQNIQLTFLDCSSNKLT-E 226
Query: 326 IPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE 384
I ++ L L FD N T + + L + L ++++ L
Sbjct: 227 ID--VTPLTQLTYFDCSVNPLT---ELDVSTLSKLTTLHCIQTDLL---EIDLTHNTQLI 278
Query: 385 KLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGC 444
+++ + + T + +L + GI ++ L L L + L
Sbjct: 279 YFQAEGCRKIKELD--VTHNTQLYLLDCQAA---GITELDLSQNPKLVYLYLNNTELT-- 331
Query: 445 VVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQ 504
++ +S T L +L+ + G + + Q
Sbjct: 332 ---------------ELD--VSHNTKLKSLSCVNAHIQ-DFSS-VGKIPALNNNFEAEGQ 372
Query: 505 LTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELD 546
++P+ L+ N L +V LD N ++
Sbjct: 373 TI-TMPKE--TLTNNSLTIAVS--------PDLLDQFGNPMN 403
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-33
Identities = 83/456 (18%), Positives = 160/456 (35%), Gaps = 84/456 (18%)
Query: 138 LETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLS 197
+ + + L SLD + + T + + LT L L + N ++
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSI--TDMTGIEKLTGLTKLICTSNNIT 77
Query: 198 GSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPE 257
+L +S NL YL +N KL++L +
Sbjct: 78 -TLDLSQNTNLT---YLACDSN--------------KLTNL------------------D 101
Query: 258 IGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVL 317
+ + L Y++ NKL+ + + + L +N N L+ E T L+EL
Sbjct: 102 VTPLTKLTYLNCDTNKLT-KLD--VSQNPLLTYLNCARNTLT---EIDVSHNTQLTELDC 155
Query: 318 VNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWE 376
N+ + ++ L D +N T + VS ++ L N +N + +
Sbjct: 156 HLNKKITKLD--VTPQTQLTTLDCSFNKITE-LDVS--QNKLLNRLNCDTNNIT---KLD 207
Query: 377 ISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDL 436
++ + L LD SSN LT +I + LT + + N + ++ L TL
Sbjct: 208 LNQNIQLTFLDCSSNKLT-EID--VTPLTQLTYFDCSVN---PLTELDVSTLSKLTTLHC 261
Query: 437 GSNNLN-----GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGD 491
+L ++Y ++ ++ T L L+ +T +
Sbjct: 262 IQTDLLEIDLTHNTQLIYFQAEGCRKIKELD--VTHNTQLYLLDCQAAGIT-ELD--LSQ 316
Query: 492 SLKVQGLYLGHNQLTGSIP-------ESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNE 544
+ K+ LYL + +LT + +SL + +S G + L + + +
Sbjct: 317 NPKLVYLYLNNTELT-ELDVSHNTKLKSL-SCVNAHI--QDFSSVGKIPALNNNFEAEGQ 372
Query: 545 LDGIVGLYVQSNKFYGEIPPEL----GNLVQLEYLD 576
+ + +N + P+L GN + +E D
Sbjct: 373 TITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGD 408
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 2e-32
Identities = 76/431 (17%), Positives = 151/431 (35%), Gaps = 59/431 (13%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
+ L+ L L + N + + +S L L+ N+L+ ++ + LT+L +
Sbjct: 58 TGIEKLTGLTKLICTSNNI---TTLDLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYL 111
Query: 142 SLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201
+ +N T S+ L L+ + N L I + TQL +LD N L
Sbjct: 112 NCDTNKLTKLDVSQN---PLLTYLNCARNTLT-EID--VSHNTQLTELDCHLNKKITKLD 165
Query: 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNC 261
V+ L LD S N ++ + + K L+ L ++ ++
Sbjct: 166 VTPQTQLT---TLDCSFNKIT-ELD--VSQNKLLNRLNCDTN--NIT------KLDLNQN 211
Query: 262 SMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNR 321
L ++ S+NKL+ ++ L + N L+ ++ + L+ L +
Sbjct: 212 IQLTFLDCSSNKLTEI---DVTPLTQLTYFDCSVNPLT-ELD--VSTLSKLTTLHCIQTD 265
Query: 322 ISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNA 380
+ I ++ L F + + V+ ++ L + + + ++S
Sbjct: 266 LL-EID--LTHNTQLIYFQAEGCRKIKELDVT--HNTQLYLLDCQAAGIT---ELDLSQN 317
Query: 381 VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNN 440
L L L++ LT ++ + + T ++ L + G +LN
Sbjct: 318 PKLVYLYLNNTELT-ELD--VSHNTKLKSLSCVNAHIQDFSS--VGKIPALNNNFEAEGQ 372
Query: 441 LNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYL 500
+ + L NN SL+ + L+ FGN + I P G +
Sbjct: 373 T---ITMPKETLTNN--------SLTIAVSPDLLDQFGNPMN--IEPGDGGVYDQATNTI 419
Query: 501 GHNQLTGSIPE 511
L+ P
Sbjct: 420 TWENLSTDNPA 430
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 4e-29
Identities = 62/381 (16%), Positives = 131/381 (34%), Gaps = 56/381 (14%)
Query: 258 IGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVL 317
+ L + N+ ++ + + L ++ N ++ T++ + TNL+ L
Sbjct: 38 EEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNIT-TLD--LSQNTNLTYLAC 92
Query: 318 VNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWE 376
+N+++ ++ ++ L L + N T + + + L N A N L +
Sbjct: 93 DSNKLT-NLD--VTPLTKLTYLNCDTNKLT---KLDVSQNPLLTYLNCARNTLT---EID 143
Query: 377 ISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDL 436
+S+ L +LD N ++ + T + L + N + + LN L+
Sbjct: 144 VSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITEL---DVSQNKLLNRLNC 198
Query: 437 GSNNL-----NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGD 491
+NN+ N + + +L ++N L+ +I ++ LT LT + N LT +
Sbjct: 199 DTNNITKLDLNQNIQLTFLDCSSNKLT-EID--VTPLTQLTYFDCSVNPLT-ELDVSTLS 254
Query: 492 SLKVQGLYLGHNQLTGSIPES----LGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDG 547
L L+ L I + L Y + L LD +
Sbjct: 255 KLTT--LHCIQTDLL-EIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITE 311
Query: 548 IVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLE 607
+ +L +L YL + L + + L L+ + ++
Sbjct: 312 L----------------DLSQNPKLVYLYLNNTELT-ELD--VSHNTKLKSLSCVNAHIQ 352
Query: 608 GEVPRSGICQNLSIISLTGNK 628
+ G L+ +
Sbjct: 353 -DFSSVGKIPALNNNFEAEGQ 372
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 7e-21
Identities = 61/328 (18%), Positives = 107/328 (32%), Gaps = 62/328 (18%)
Query: 311 NLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLL 369
N + V + + +L L D ++ T + + L + SN +
Sbjct: 19 NFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITDMTGIE--KLTGLTKLICTSNNI 76
Query: 370 EGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCI 429
+ ++S L L SN LT + + LT + L ++N + ++
Sbjct: 77 T---TLDLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNK---LTKLDVSQNP 127
Query: 430 SLNTLDLGSNNLN-----GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS 484
L L+ N L + L + N K+ ++ T LTTL+ N +T
Sbjct: 128 LLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITEL 185
Query: 485 IPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNE 544
+ + + L N +T + LT LD S N+
Sbjct: 186 ---DVSQNKLLNRLNCDTNNIT-KLD------------------LNQNIQLTFLDCSSNK 223
Query: 545 LDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADN 604
L I ++ L QL Y D S+N L + + +L L L+
Sbjct: 224 LTEI----------------DVTPLTQLTYFDCSVNPLT-ELD--VSTLSKLTTLHCIQT 264
Query: 605 RLEGEVPRSGICQNLSIISLTGNKDLCE 632
L E+ + L G + + E
Sbjct: 265 DLL-EIDLTH-NTQLIYFQAEGCRKIKE 290
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 3e-18
Identities = 57/284 (20%), Positives = 94/284 (33%), Gaps = 48/284 (16%)
Query: 357 ENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNF 416
+N AA+ ++ + + L LD ++ +T I LT + L SN
Sbjct: 18 DNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD--MTGIEKLTGLTKLICTSNN 75
Query: 417 FDGIIPMEFGDCISLNTLDLGSNNL-----NGCVVVVYLLLNNNMLSGKIPGSLSRLTNL 471
+ + +L L SN L + YL + N L+ +S+ L
Sbjct: 76 ITTL---DLSQNTNLTYLACDSNKLTNLDVTPLTKLTYLNCDTNKLT---KLDVSQNPLL 129
Query: 472 TTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIP-------ESLGYLSGNKLYGS 524
T LN N LT I + ++ L N+ + +L S NK+
Sbjct: 130 TYLNCARNTLT-EID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTL-DCSFNKITEL 185
Query: 525 VPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDG 584
L L+ N + + +L +QL +LD S N L
Sbjct: 186 ---DVSQNKLLNRLNCDTNNITKL----------------DLNQNIQLTFLDCSSNKLT- 225
Query: 585 HIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNK 628
I + L L Y + + N L E+ S L+ +
Sbjct: 226 EID--VTPLTQLTYFDCSVNPLT-ELDVST-LSKLTTLHCIQTD 265
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 8e-06
Identities = 19/141 (13%), Positives = 50/141 (35%), Gaps = 19/141 (13%)
Query: 81 SPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLET 140
+ + + L +LD + +S +L L + +L+ + + T+L++
Sbjct: 290 ELDVTHNTQLYLLDCQAAGI---TELDLSQNPKLVYLYLNNTELT-ELD--VSHNTKLKS 343
Query: 141 ISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSL 200
+S + S +G I L + + + L++N L+ ++
Sbjct: 344 LSCVNAHIQDF--SSVGKIPALNNNFEAEG-----------QTITMPKETLTNNSLTIAV 390
Query: 201 PVSLLKNLQSLSYLDVSNNLL 221
LL + ++ + +
Sbjct: 391 SPDLLDQFGNPMNIEPGDGGV 411
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 5e-34
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 662 IIVFENVIGGGGFRTAFKGTMPDQK----TVAVKKLSQATGQCDR-EFAAEMETLDMVKH 716
I+ F VIG G F + GT+ D AVK L++ T + +F E + H
Sbjct: 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 717 QNLVQLLGYCSVGEEKLL-VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
N++ LLG C E L V YM +G L +++RN + A+G+ +L
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 145
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP---- 830
F +H D+ N +L++ F KV+DFGLAR + D E + + T +P
Sbjct: 146 SKKF----VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK--TGAKLPVKWM 199
Query: 831 -SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
E Q + + D++SFGV+L EL+T G P
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 232
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 6e-34
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 34/215 (15%)
Query: 663 IVFENVIGGGGFRTAFKGT---MPDQKT--VAVKKLSQATGQCDREFAAEMETLDMVKHQ 717
+ F +G G F + + D VAVKKL +T + R+F E+E L ++H
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 102
Query: 718 NLVQLLGYCSVGEEK--LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
N+V+ G C + L+ EY+ GSL D+L+ +D K + +G+ +L
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834
+ IH D+ T NIL+ + K+ DFGL +++ + + Y E G
Sbjct: 163 TKRY----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY----------YKVKEPG 208
Query: 835 Q------------AGRANERGDIYSFGVILLELVT 857
+ + + D++SFGV+L EL T
Sbjct: 209 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 1e-33
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 663 IVFENVIGGGGFRTAFKGT---MPDQKT--VAVKKLSQATGQCDREFAAEMETLDMVKHQ 717
+ F +G G F + + D VAVKKL +T + R+F E+E L ++H
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 718 NLVQLLGYCSVGEEK--LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
N+V+ G C + L+ EY+ GSL D+L+ +D K + +G+ +L
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834
+ IH D+ T NIL+ + K+ DFGL +++ + + E G
Sbjct: 132 TKRY----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF----------FKVKEPG 177
Query: 835 Q------------AGRANERGDIYSFGVILLELVT 857
+ + + D++SFGV+L EL T
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-33
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 9/202 (4%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ E +G G F + GT VA+K L T + F E + + ++H+ LVQL
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL 244
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFLH-HGFKP 780
S E +V EYM GSL D+L+ L + +A A G++++ +
Sbjct: 245 YAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-- 301
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
+H D++ +NIL+ + KV+DFGLARLI D E I + E GR
Sbjct: 302 --VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 841 ERGDIYSFGVILLELVT-GKQP 861
+ D++SFG++L EL T G+ P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-33
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 35/220 (15%)
Query: 663 IVFENVIGGGGFRTAFKGT---MPDQKT--VAVKKLSQATGQCDREFAAEMETLDMVKHQ 717
+ + + +G G F + + D VAVK+L + R+F E++ L +
Sbjct: 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSD 84
Query: 718 NLVQLLGYCSVGEEK--LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
+V+ G + LV EY+ +G L D+L+ A LD + + +G+ +L
Sbjct: 85 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834
+H D+ NIL+ K++DFGLA+L+ + + YV E G
Sbjct: 145 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY----------YVVREPG 190
Query: 835 Q------------AGRANERGDIYSFGVILLELVT-GKQP 861
Q + + D++SFGV+L EL T +
Sbjct: 191 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 230
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 2e-33
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 15/210 (7%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK----TVAVKKLSQATGQCDR-EFAAEMETLDMVKHQ 717
+ VIG G F + G DQ A+K LS+ T F E + + H
Sbjct: 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHP 82
Query: 718 NLVQLLGYCSVGEE-KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-H 775
N++ L+G E ++ YM +G L ++R+ + ARG+ +L
Sbjct: 83 NVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT---IGYVPSE 832
F +H D+ N +L++ F KV+DFGLAR I D E + + + E
Sbjct: 143 QKF----VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 833 YGQAGRANERGDIYSFGVILLELVT-GKQP 861
Q R + D++SFGV+L EL+T G P
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 5e-33
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 9/202 (4%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ E +G G F + GT VA+K L T + F E + + ++H+ LVQL
Sbjct: 269 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL 327
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFLH-HGFKP 780
S E +V EYM GSL D+L+ L + +A A G++++ +
Sbjct: 328 YAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-- 384
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
+H D++ +NIL+ + KV+DFGLARLI D E I + E GR
Sbjct: 385 --VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 841 ERGDIYSFGVILLELVT-GKQP 861
+ D++SFG++L EL T G+ P
Sbjct: 443 IKSDVWSFGILLTELTTKGRVP 464
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 6e-33
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 663 IVFENVIGGGGFRTAFKGT--MPDQKT--VAVKKLSQATGQCDR-EFAAEMETLDMVKHQ 717
I E +IG G G +P Q+ VA+K L + R +F +E + H
Sbjct: 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHP 110
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-HH 776
N+++L G + G ++V EYM NGSLD +LR + + G G+ +L
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG-- 834
G+ +H D+ N+L++ KVSDFGL+R++ D D + G
Sbjct: 171 GY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLED----------DPDAAYTTTGGKI 216
Query: 835 ----------QAGRANERGDIYSFGVILLELVT-GKQP 861
+ D++SFGV++ E++ G++P
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 8e-33
Identities = 66/212 (31%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK----TVAVKKLSQATGQCDR-EFAAEMETLDMVKHQ 717
+ F VIG G F + GT+ D AVK L++ T + +F E + H
Sbjct: 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 718 NLVQLLGYCSVGEEKLL-VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-H 775
N++ LLG C E L V YM +G L +++RN + A+G+ FL
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 210
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP----- 830
F +H D+ N +L++ F KV+DFGLAR + D E + T +P
Sbjct: 211 KKF----VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK--TGAKLPVKWMA 264
Query: 831 SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
E Q + + D++SFGV+L EL+T G P
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 296
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 8e-33
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK-----TVAVKKLSQATGQCDR-EFAAEMETLDMVKH 716
V+G G F T +KG + VA+K+L +AT E E + V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-H 775
++ +LLG C L+ + M G L D++R ++ A+G+++L
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IGYVPSEYG 834
+H D+ N+L+ K++DFGLA+L+ E + I ++ E
Sbjct: 136 RRL----VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 835 QAGRANERGDIYSFGVILLELVT-GKQP 861
+ D++S+GV + EL+T G +P
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKP 219
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 1e-32
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 663 IVFENVIGGGGFRTAFKGT--MPDQKT--VAVKKLSQATGQCDR-EFAAEMETLDMVKHQ 717
I + V+G G F G +P +K VA+K L + R +F E + H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-HH 776
N+++L G + + ++V EYM NGSLD +LR A + + G A G+ +L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES--HVSTDTADTIGYVPSEYG 834
G+ +H D+ NIL+N KVSDFGL R++ D + + I + E
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 835 QAGRANERGDIYSFGVILLELVT-GKQP 861
+ D++S+G++L E+++ G++P
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP 250
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 1e-32
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKT-VAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ 721
I ++ +GGG + ++G VAVK L + T + + EF E + +KH NLVQ
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFL-HHGFK 779
LLG C+ ++ E+M G+L D+LR + +A + + +L F
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF- 132
Query: 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA 839
IH D+ N L+ + KV+DFGL+RL++ I + E +
Sbjct: 133 ---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 840 NERGDIYSFGVILLELVT-GKQP 861
+ + D+++FGV+L E+ T G P
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP 212
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 2e-32
Identities = 96/553 (17%), Positives = 175/553 (31%), Gaps = 90/553 (16%)
Query: 88 SSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSN 146
IL++S+N + +L +L +L++L + N++ S LE + L N
Sbjct: 21 QKTTILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79
Query: 147 SFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLK 206
+L + L+ LDLS N
Sbjct: 80 --------------KLVKISCHP-------------TVNLKHLDLSFNAFDALPICKEFG 112
Query: 207 NLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKY 266
N+ L +L +S L + I +L L + Y +
Sbjct: 113 NMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEK-------EDPEGLQDFNT 165
Query: 267 ISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSI 326
SL + + + NL+ + + +ED L N
Sbjct: 166 ESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNP----- 220
Query: 327 PEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAV----- 381
+S L L + +N+F I +W++ + F+ ++ L+G L + +
Sbjct: 221 --KLSNLTLNNIETTWNSFIR-ILQLVWHT-TVWYFSISNVKLQGQLDFRDFDYSGTSLK 276
Query: 382 ALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL 441
AL + S++ +N+ I + + + LD +N L
Sbjct: 277 ALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLL 336
Query: 442 --------NGCVVVVYLLLNNNMLS--GKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGD 491
+ L+L N L KI +++ +L L++ N ++
Sbjct: 337 TDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCS 396
Query: 492 SL-KVQGLYLGHNQLTGSIPESLG------YLSGNKLYGSVPTSFGNLNGLTHLDLSCNE 544
+ L + N LT +I L L NK+ S+P L L L+++ N+
Sbjct: 397 WTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKI-KSIPKQVVKLEALQELNVASNQ 455
Query: 545 LDGIVGLYVQSNKFYGEIPPE-LGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLAD 603
L +P L L+ + N D CS P + YL+
Sbjct: 456 L--------------KSVPDGIFDRLTSLQKIWLHTNPWD-------CSCPRIDYLSRWL 494
Query: 604 NRLEGEVPRSGIC 616
N+ + S C
Sbjct: 495 NKNSQKEQGSAKC 507
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 1e-25
Identities = 86/486 (17%), Positives = 155/486 (31%), Gaps = 96/486 (19%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQL-SGSIPSQLGLLTRLETISLR 144
L LDLS N L ++S LK L + N + I + G +++L+ + L
Sbjct: 67 FNQELEYLDLSHNKL-VKISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLS 123
Query: 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSL 204
+ + + K L G L L + +
Sbjct: 124 TTHLEKSSVLPIAHLNISKVLLVLGE--TYGEKEDPEGLQDFNTESLHIVFPTNKEFHFI 181
Query: 205 LKN-LQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIG---- 259
L +++++ L++SN L L+ L L+L T
Sbjct: 182 LDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRIL 241
Query: 260 ---NCSMLKYISLSNNKLSGPIPREL-----CNSGSLVEINLDGNMLSGTIEDVFDRCTN 311
+ + Y S+SN KL G + + +L + ++ +++ +N
Sbjct: 242 QLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSN 301
Query: 312 LSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEG 371
++ + + +
Sbjct: 302 MNIKNFTVSG--------TRMVHMLCPS-------------------------------- 321
Query: 372 SLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI--IPMEFGDCI 429
LD S+N+LT + + G+LT ++ L L N + I
Sbjct: 322 -------KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMK 374
Query: 430 SLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEF 489
SL LD+ N+++ + G S +L +LN+ N+LT +I
Sbjct: 375 SLQQLDISQNSVS---------------YDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL 419
Query: 490 GDSLKVQGLYLGHNQLTGSIPESLG--------YLSGNKLYGSVP-TSFGNLNGLTHLDL 540
+KV L L N++ SIP+ + ++ N+L SVP F L L + L
Sbjct: 420 PPRIKV--LDLHSNKIK-SIPKQVVKLEALQELNVASNQL-KSVPDGIFDRLTSLQKIWL 475
Query: 541 SCNELD 546
N D
Sbjct: 476 HTNPWD 481
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 1e-22
Identities = 78/412 (18%), Positives = 154/412 (37%), Gaps = 39/412 (9%)
Query: 79 PVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRL 138
P+ N+S L+ L LS L +++L K+L V L
Sbjct: 106 PICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKED--PEGLQDF 163
Query: 139 ETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNG-----------TIPSRLGDLTQLQ 187
T SL T + + D+ + + + +I ++L +L
Sbjct: 164 NTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLS 223
Query: 188 DLDLSDNLLSGSLPVSLLKNLQ--SLSYLDVSNNLLSGNIPPEIG-----NLKKLSDLYL 240
+L L++ + + + +L+ + ++ Y +SN L G + +LK LS +
Sbjct: 224 NLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQV 283
Query: 241 GIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSG 300
+ S + + + + + ++ N+L+
Sbjct: 284 VSDVFGFPQSYIYE-----IFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTD 338
Query: 301 TIEDVFDRCTNLSELVLVNNRISGSIPEYIS---ELP-LKVFDLQYNNFTGVIPVSLWNS 356
T+ + T L L+L N++ + + ++ L+ D+ N+ + +
Sbjct: 339 TVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSW 397
Query: 357 -ENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSN 415
++L+ N +SN+L ++ + ++ LDL SN + IPK++ L +Q L + SN
Sbjct: 398 TKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASN 454
Query: 416 FFDGIIPMEFGDCISLNTLDLGSNNLN-GCVVVVYL--LLNNNMLSGKIPGS 464
+ F SL + L +N + C + YL LN N S K GS
Sbjct: 455 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKN--SQKEQGS 504
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 88.4 bits (219), Expect = 2e-18
Identities = 62/422 (14%), Positives = 131/422 (31%), Gaps = 69/422 (16%)
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323
+++S N +S ++ + L + + N + VF L L L +N++
Sbjct: 23 TTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV 82
Query: 324 G--------------------SIPE--YISELP-LKVFDLQYNNFTGVIPVSLWNSENLM 360
++P + LK L + + + +
Sbjct: 83 KISCHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISK 142
Query: 361 EFNAASNLL---EGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFF 417
E + N +L + ++ + + + N+++ +
Sbjct: 143 VLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLE 202
Query: 418 DGIIPMEFGD-----------CISLNTLDLGSNNLNGCVVVV------YLLLNNNMLSG- 459
D ++LN ++ N+ + +V Y ++N L G
Sbjct: 203 DNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQ 262
Query: 460 ----KIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTG------SI 509
S + L L+ + ++ + + + S
Sbjct: 263 LDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSK 322
Query: 510 PESLGYL--SGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELG 567
+L S N L +V + G+L L L L N+L + E+ ++
Sbjct: 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQL--------KELSKIAEMTTQMK 374
Query: 568 NLVQLEYLDFSMNMLDGHIPEKLCS-LPYLLYLNLADNRLEGEVPRSGICQNLSIISLTG 626
+L + LD S N + + CS LL LN++ N L + R + + ++ L
Sbjct: 375 SL---QQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRC-LPPRIKVLDLHS 430
Query: 627 NK 628
NK
Sbjct: 431 NK 432
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 81.4 bits (201), Expect = 4e-16
Identities = 60/341 (17%), Positives = 115/341 (33%), Gaps = 41/341 (12%)
Query: 34 FKNSLQNPQVLSGWNKTTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRIL 93
F + + +L KT + +KC + K +P L NL+ L +
Sbjct: 172 FPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLT-LNNI 230
Query: 94 DLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLG-----LLTRLETISLRSNSF 148
+ + N L Q+ + S+ +L G + + L L + S+ F
Sbjct: 231 ETTWNSFIRIL--QLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF 288
Query: 149 TGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNL 208
+ +F+ +G ++ LD S+NLL+ +L
Sbjct: 289 GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLT-DTVFENCGHL 347
Query: 209 QSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYIS 268
L L + N L + ++ L+ +
Sbjct: 348 TELETLILQMNQLK-ELSKIAEMTTQMKS--------------------------LQQLD 380
Query: 269 LSNNKLSGPIPRELCNS-GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIP 327
+S N +S + C+ SL+ +N+ N+L+ TI + L L +N+I SIP
Sbjct: 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPP--RIKVLDLHSNKIK-SIP 437
Query: 328 EYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASN 367
+ + +L L+ ++ N V +L + +N
Sbjct: 438 KQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTN 478
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 2e-32
Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 36/227 (15%)
Query: 663 IVFENVIGGGGFRTAFKGT------MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH 716
IV + +G G F F D+ VAVK L T ++F E E L ++H
Sbjct: 17 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH 76
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRC--------------- 761
+++V+ G C G+ ++V+EYM +G L+ +LR
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 762 KIAYGAARGISFL-HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820
IA A G+ +L F +H D+ T N L+ K+ DFG++R + + +
Sbjct: 137 HIASQIASGMVYLASQHF----VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY--- 189
Query: 821 DTADTIGYVP-----SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
+P E + D++SFGVIL E+ T GKQP
Sbjct: 190 -RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 3e-32
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 663 IVFENVIGGGGFRTAFKG-----TMPDQKTVAVKKLSQATGQCDR-EFAAEMETLDMVKH 716
+ + VIG G F +KG + + VA+K L + R +F E + H
Sbjct: 46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-H 775
N+++L G S + +++ EYM NG+LD +LR + + + G A G+ +L +
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 165
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP----- 830
+ +H D+ NIL+N KVSDFGL+R++ D + G +P
Sbjct: 166 MNY----VHRDLAARNILVNSNLVCKVSDFGLSRVLED---DPEATYTTSGGKIPIRWTA 218
Query: 831 SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
E + D++SFG+++ E++T G++P
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 4e-32
Identities = 49/227 (21%), Positives = 88/227 (38%), Gaps = 36/227 (15%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK-----TVAVKKLSQATGQCDR-EFAAEMETLDMVKH 716
+ +G G F + VAVK L +G + E+E L + H
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 82
Query: 717 QNLVQLLGYCSVGEEK--LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
+N+V+ G C+ L+ E++ +GSL ++L ++ ++ K A +G+ +L
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 142
Query: 775 H-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY 833
+ +H D+ N+L+ + K+ DFGL + I D Y +
Sbjct: 143 GSRQY----VHRDLAARNVLVESEHQVKIGDFGLTKAIET----------DKEYYTVKDD 188
Query: 834 GQA------------GRANERGDIYSFGVILLELVT-GKQPTGPEFE 867
+ + D++SFGV L EL+T + P
Sbjct: 189 RDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 235
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 5e-32
Identities = 66/202 (32%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ +G G F + G VAVK L Q + D F AE + ++HQ LV+L
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL 73
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFL-HHGFKP 780
+ E ++ EYM NGSL D+L+ L K +A A G++F+ +
Sbjct: 74 YAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-- 130
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
IH D++ +NIL++D K++DFGLARLI D E I + E G
Sbjct: 131 --IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 841 ERGDIYSFGVILLELVT-GKQP 861
+ D++SFG++L E+VT G+ P
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIP 210
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 5e-32
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK-----TVAVKKLSQATGQCDR-EFAAEMETLDMVKH 716
+ V+G G F T KG + V +K + +G+ M + + H
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH- 775
++V+LLG C G LV +Y+ GSL D +R +L A+G+ +L
Sbjct: 75 AHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IGYVPSEYG 834
HG +H ++ N+LL + +V+DFG+A L+ + + A T I ++ E
Sbjct: 134 HGM----VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 835 QAGRANERGDIYSFGVILLELVT-GKQP 861
G+ + D++S+GV + EL+T G +P
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMTFGAEP 217
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 9e-32
Identities = 51/230 (22%), Positives = 87/230 (37%), Gaps = 52/230 (22%)
Query: 663 IVFENVIGGGGFRTAFKGT--------MPDQKTVAVKKLSQATGQCDREFAAEMETLDMV 714
++F +G G F FKG + V +K L +A F + +
Sbjct: 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 715 KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
H++LV G C G+E +LV E++ GSLD +L+ ++ + ++A A + FL
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL 129
Query: 775 -HHGFKPYIIHMDIKTSNILLNDYFE--------AKVSDFGLARLISDCESHVSTDTADT 825
+ IH ++ NILL + K+SD G++ +
Sbjct: 130 EENTL----IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP------------ 173
Query: 826 IGYVPSEYGQA--------GRANERG-----DIYSFGVILLELVT-GKQP 861
+ Q N + D +SFG L E+ + G +P
Sbjct: 174 -----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 1e-31
Identities = 99/499 (19%), Positives = 170/499 (34%), Gaps = 68/499 (13%)
Query: 162 LKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLL 221
K+L S N ++ + L++L+ L LS N + SL + Q L YLDVS+N L
Sbjct: 54 TKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSHNRL 112
Query: 222 SGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKL-SGPIPR 280
NI + L L L + L + E GN + L ++ LS K +
Sbjct: 113 Q-NISC--CPMASLRHLDLSFNDFD-VL---PVCKEFGNLTKLTFLGLSAAKFRQLDLLP 165
Query: 281 ELCNSGSLVEINLDGNMLSGTIEDVF-DRCTNLSELVLVNNRISGSIPE----YISELPL 335
S + ++L + G + T + LV N + + L L
Sbjct: 166 VAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQL 225
Query: 336 KVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWE-------ISNAVALEKLDL 388
L N ++ + N L +W+ +E L++
Sbjct: 226 SNIKLNDENCQRLMTFLSELTRGPTLLN--VTLQHIETTWKCSVKLFQFFWPRPVEYLNI 283
Query: 389 SSNMLTRQIPKKIGN-----LTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNG 443
+ +T +I ++ L ++ I + + F + +N L ++
Sbjct: 284 YNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPF 343
Query: 444 CVVVV--------YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKV 495
+V +L N+ + + S L L TL L N L + + +
Sbjct: 344 IHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNM 402
Query: 496 QGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQS 555
L L S+ + + + L+LS N L G V
Sbjct: 403 SSLETLDVSLN-SLN-----------SHAYDRTCAWAESILVLNLSSNMLTGSV------ 444
Query: 556 NKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGI 615
+ +PP +++ LD N + IP+ + L L LN+A N+L+ VP
Sbjct: 445 ---FRCLPP------KVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVF 493
Query: 616 --CQNLSIISLTGNKDLCE 632
+L I L N C
Sbjct: 494 DRLTSLQYIWLHDNPWDCT 512
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 2e-30
Identities = 95/503 (18%), Positives = 175/503 (34%), Gaps = 65/503 (12%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-LTQ 185
+P L R + +SL NS + ++ + +L+ L S N + ++ +
Sbjct: 45 HVPK--DLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQD 101
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLL-SGNIPPEIGNLKKLSDLYLGIGP 244
L+ LD+S N L ++ + +L+ +LD+S N + E GNL KL+ L L
Sbjct: 102 LEYLDVSHNRLQ-NISCCPMASLR---HLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAK 157
Query: 245 YQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIED 304
++ L + + +C +L L + + G L + ++L + S
Sbjct: 158 FR-QLDLLPVAHLHLSCILLD---LVSYHIKGGETESLQI-PNTTVLHLVFHPNSLFSVQ 212
Query: 305 VFDRCTNLSELVLVNNRISG-SIPEYISELPLKVFDLQYNNFTGVIPVSLWNS-ENLMEF 362
V L L L N +++ + ++ L N T + W L +F
Sbjct: 213 VNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQF 272
Query: 363 NAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIP 422
+ + + L ++ + + L ++ I + + F
Sbjct: 273 FWPRPVEY----------LNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKE 322
Query: 423 MEFGDCISLNTLDLGSNNLNGCVVVV--------YLLLNNNMLSGKIPGSLSRLTNLTTL 474
+ +N L ++ +V +L N+ + + S L L TL
Sbjct: 323 ALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTL 382
Query: 475 NLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTG----------SIPESLGYL--SGNKLY 522
L N L + + + L L + ES+ L S N L
Sbjct: 383 ILQRNGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLT 441
Query: 523 GSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNML 582
GSV + LDL N + IP ++ +L L+ L+ + N L
Sbjct: 442 GSVFRCLPPK--VKVLDLHNNRIM--------------SIPKDVTHLQALQELNVASNQL 485
Query: 583 DGHIPE-KLCSLPYLLYLNLADN 604
+P+ L L Y+ L DN
Sbjct: 486 -KSVPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 3e-26
Identities = 86/480 (17%), Positives = 158/480 (32%), Gaps = 68/480 (14%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144
LS LR+L LS N + L V + L+ L V N+L +I + L + L
Sbjct: 74 FLSELRVLRLSHNRI-RSLDFHVFLFNQDLEYLDVSHNRLQ-NISC--CPMASLRHLDLS 129
Query: 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSL 204
N L + G+LT+L L LS L +
Sbjct: 130 FN--------------DFDVL---------PVCKEFGNLTKLTFLGLSAAKFR-QLDLLP 165
Query: 205 LKNLQ-SLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSM 263
+ +L S LD+ + + G + + L+L P L ++
Sbjct: 166 VAHLHLSCILLDLVSYHIKGGETESLQIP-NTTVLHLVFHPNSLFSVQVNMSVNALGHLQ 224
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFD-----RCTNLSELVLV 318
L I L++ + + +N+ + T + + L +
Sbjct: 225 LSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIY 284
Query: 319 NNRISGSIPEYISEL------PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGS 372
N I+ I L + ++ F + + +
Sbjct: 285 NLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFI 344
Query: 373 LSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLN 432
+ + L+ + N+ T + + L +Q L L N +++
Sbjct: 345 HMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMS 403
Query: 433 TLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDS 492
+L+ +L N++ S + + ++ LNL N+LTGS+
Sbjct: 404 SLETLDVSL------------NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPK 451
Query: 493 LKVQGLYLGHNQLTGSIPESLG--------YLSGNKLYGSVPT-SFGNLNGLTHLDLSCN 543
+KV L L +N++ SIP+ + ++ N+L SVP F L L ++ L N
Sbjct: 452 VKV--LDLHNNRIM-SIPKDVTHLQALQELNVASNQL-KSVPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 6e-26
Identities = 88/467 (18%), Positives = 156/467 (33%), Gaps = 62/467 (13%)
Query: 88 SSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQL-GLLTRLETISLRS 145
+ L LS+N + +L S L L++L + N++ S+ + LE + +
Sbjct: 52 PRTKALSLSQNSIS-ELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSH 109
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIP--SRLGDLTQLQDLDLSDNLLSGSLPVS 203
N + + L+ LD S N + +P G+LT+L L LS L +
Sbjct: 110 NRLQ-NISC--CPMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFR-QLDLL 164
Query: 204 LLKNLQ-SLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCS 262
+ +L S LD+ + + G + + L+L P L ++
Sbjct: 165 PVAHLHLSCILLDLVSYHIKGGETESLQIPN-TTVLHLVFHPNSLFSVQVNMSVNALGHL 223
Query: 263 MLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFD-----RCTNLSELVL 317
L I L++ + + +N+ + T + + L +
Sbjct: 224 QLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNI 283
Query: 318 VNNRISGSIPE---------------------YISELPLKVFD---------LQYNNFTG 347
N I+ I ++ L ++
Sbjct: 284 YNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPF 343
Query: 348 VIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNI 407
+ V + + N N+ S+ S L+ L L N L K N+
Sbjct: 344 IHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNM 402
Query: 408 QILKLNSNFFDGIIPMEFGDCI----SLNTLDLGSNNLNGCVV------VVYLLLNNNML 457
L+ + + + S+ L+L SN L G V V L L+NN +
Sbjct: 403 SSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRI 462
Query: 458 SGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLK-VQGLYLGHN 503
IP ++ L L LN+ N L S+P D L +Q ++L N
Sbjct: 463 M-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 80.3 bits (198), Expect = 1e-15
Identities = 73/343 (21%), Positives = 129/343 (37%), Gaps = 35/343 (10%)
Query: 4 LLLCLMVFSLSFGTFTAIDEPKQERRSLVHFKNSLQNPQV-----------LSGWNKTTR 52
+LL L+ + + G ++ P LV NSL + QV LS
Sbjct: 174 ILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDE 233
Query: 53 HCHWF----GVKCRHSRVVSLVIQTQSLKGPVSPFLFN------LSSLRILD--LSKNLL 100
+C R ++++ +Q S LF + L I + +++ +
Sbjct: 234 NCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERID 293
Query: 101 FGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIK 160
+ + + LK L + V S + + + L +
Sbjct: 294 REEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPS 353
Query: 161 QLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPV--SLLKNLQSLSYLDVS- 217
L+F+ N ++ L +LQ L L N L + + KN+ SL LDVS
Sbjct: 354 SFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSL 412
Query: 218 NNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGP 277
N+L S + + L L S+F + P+ +K + L NN++
Sbjct: 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF-RCLPPK------VKVLDLHNNRIMS- 464
Query: 278 IPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNN 320
IP+++ + +L E+N+ N L + VFDR T+L + L +N
Sbjct: 465 IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDN 507
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 3e-31
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ E +G G F + T VAVK + + + F AE + ++H LV+L
Sbjct: 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKL 248
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFL-HHGFKP 780
+ E ++ E+M GSL D+L+ + + K + A G++F+ +
Sbjct: 249 HAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY-- 305
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
IH D++ +NIL++ K++DFGLAR+I D E I + E G
Sbjct: 306 --IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 841 ERGDIYSFGVILLELVT-GKQP 861
+ D++SFG++L+E+VT G+ P
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIP 385
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 4e-31
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 663 IVFENVIGGGGFRTAFKGT------MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH 716
IV + +G G F F D+ VAVK L +A+ ++F E E L M++H
Sbjct: 43 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQH 102
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRC--------------K 762
Q++V+ G C+ G L+V+EYM +G L+ +LR+
Sbjct: 103 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 763 IAYGAARGISFL-HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821
+A A G+ +L F +H D+ T N L+ K+ DFG++R I + +
Sbjct: 163 VASQVAAGMVYLAGLHF----VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY---- 214
Query: 822 TADTIGYVP-----SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
+P E + D++SFGV+L E+ T GKQP
Sbjct: 215 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 4e-31
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK-----TVAVKKLSQATGQCDR-EFAAEMETLDMVKH 716
V+G G F T +KG + VA+K+L +AT E E + V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-H 775
++ +LLG C L+ + M G L D++R ++ A+G+++L
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IGYVPSEYG 834
+H D+ N+L+ K++DFGLA+L+ E + I ++ E
Sbjct: 136 RRL----VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 835 QAGRANERGDIYSFGVILLELVT-GKQP 861
+ D++S+GV + EL+T G +P
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKP 219
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 5e-31
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 662 IIVFENVIGGGGFRTAFKGTMPDQK---TVAVKKLSQATGQCDR-EFAAEMETLDMVKHQ 717
+++ + +G G F + +G +K VA+K L Q T + D E E + + + +
Sbjct: 11 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 70
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-HH 776
+V+L+G C E +LV E G L +L + + ++ + + G+ +L
Sbjct: 71 YIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK 129
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP-----S 831
F +H D+ N+LL + AK+SDFGL++ + + S TA + G P
Sbjct: 130 NF----VHRDLAARNVLLVNRHYAKISDFGLSKALGADD---SYYTARSAGKWPLKWYAP 182
Query: 832 EYGQAGRANERGDIYSFGVILLELVT-GKQP 861
E + + R D++S+GV + E ++ G++P
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 7e-31
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 12/206 (5%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK----TVAVKKLSQATGQCDR-EFAAEMETLDMVKHQ 717
I IG G F +G + VA+K T R +F E T+ H
Sbjct: 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-HH 776
++V+L+G + ++ E G L +L+ R SLD AY + +++L
Sbjct: 77 HIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 135
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA 836
F +H DI N+L++ K+ DFGL+R + D + ++ I ++ E
Sbjct: 136 RF----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 191
Query: 837 GRANERGDIYSFGVILLELVT-GKQP 861
R D++ FGV + E++ G +P
Sbjct: 192 RRFTSASDVWMFGVCMWEILMHGVKP 217
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 1e-30
Identities = 56/228 (24%), Positives = 92/228 (40%), Gaps = 37/228 (16%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK------TVAVKKLSQ-ATGQCDREFAAEMETLDMVK 715
+ F +G F +KG + VA+K L A G EF E ++
Sbjct: 11 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ 70
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRC-------------- 761
H N+V LLG + + +++ Y +G L ++L R+ D G
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 762 -KIAYGAARGISFL-HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819
+ A G+ +L H +H D+ T N+L+ D K+SD GL R + + +
Sbjct: 131 VHLVAQIAAGMEYLSSHHV----VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY-- 184
Query: 820 TDTADTIGYVP-----SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
+P E G+ + DI+S+GV+L E+ + G QP
Sbjct: 185 --KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 2e-30
Identities = 54/227 (23%), Positives = 88/227 (38%), Gaps = 38/227 (16%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK-----TVAVKKLSQATGQCDR-EFAAEMETLDMVKH 716
+ +G G F VAVK L G R + E++ L + H
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYH 92
Query: 717 QNLVQLLGYCSVGEEK--LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
+++++ G C LV EY+ GSL D+L S+ + A G+++L
Sbjct: 93 EHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYL 150
Query: 775 H-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY 833
H + IH D+ N+LL++ K+ DFGLA+ + + + Y E
Sbjct: 151 HAQHY----IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY----------YRVRED 196
Query: 834 GQA------------GRANERGDIYSFGVILLELVT-GKQPTGPEFE 867
G + + D++SFGV L EL+T P +
Sbjct: 197 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK 243
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-30
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 12/206 (5%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK----TVAVKKLSQATGQCDR-EFAAEMETLDMVKHQ 717
I IG G F +G + VA+K T R +F E T+ H
Sbjct: 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-H 776
++V+L+G + ++ E G L +L+ R SLD AY + +++L
Sbjct: 452 HIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK 510
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA 836
F +H DI N+L++ K+ DFGL+R + D + ++ I ++ E
Sbjct: 511 RF----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 837 GRANERGDIYSFGVILLELVT-GKQP 861
R D++ FGV + E++ G +P
Sbjct: 567 RRFTSASDVWMFGVCMWEILMHGVKP 592
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 2e-30
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 25/208 (12%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ IG G F G K VAVK + + F AE + ++H NLVQL
Sbjct: 23 LKLLQTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQL 79
Query: 723 LGYCSVGEEKL-LVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFL-HHGFK 779
LG + L +V EYM GSL D+LR+R + L K + + +L + F
Sbjct: 80 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF- 138
Query: 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP-----SEYG 834
+H D+ N+L+++ AKVSDFGL + + G +P E
Sbjct: 139 ---VHRDLAARNVLVSEDNVAKVSDFGLTKEA---------SSTQDTGKLPVKWTAPEAL 186
Query: 835 QAGRANERGDIYSFGVILLELVT-GKQP 861
+ + + + D++SFG++L E+ + G+ P
Sbjct: 187 REKKFSTKSDVWSFGILLWEIYSFGRVP 214
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 4e-30
Identities = 47/218 (21%), Positives = 84/218 (38%), Gaps = 36/218 (16%)
Query: 663 IVFENVIGGGGFRTAFKGT--MPDQKT--VAVKKLSQATGQCDR-EFAAEMETLDMVKHQ 717
+V ++G G F ++G + VAVK + ++ +F +E + + H
Sbjct: 14 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 73
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-HH 776
++V+L+G E ++ E G L +L SL + + +++L
Sbjct: 74 HIVKLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG-- 834
+H DI NIL+ K+ DFGL+R I D + Y +
Sbjct: 133 NC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDED------------YYKASVTRL 176
Query: 835 ----------QAGRANERGDIYSFGVILLELVT-GKQP 861
R D++ F V + E+++ GKQP
Sbjct: 177 PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 5e-30
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 663 IVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATGQCDR-EFAAEMETLDMVK 715
I +G G F ++G + VA+K +++A +R EF E +
Sbjct: 27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 86
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR---------AASLDWGKRCKIAYG 766
++V+LLG S G+ L++ E M G L +LR+ A K ++A
Sbjct: 87 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 146
Query: 767 AARGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT 825
A G+++L+ + F +H D+ N ++ + F K+ DFG+ R I + + +
Sbjct: 147 IADGMAYLNANKF----VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG----G 198
Query: 826 IGYVP-----SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
G +P E + G D++SFGV+L E+ T +QP
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 240
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 8e-30
Identities = 58/213 (27%), Positives = 85/213 (39%), Gaps = 22/213 (10%)
Query: 663 IVFENVIGGGGFRTAFKGT--MPDQKT--VAVKKL---SQATGQCDREFAAEMETLDMVK 715
+ +G G F +G P KT VAVK L + + +F E+ + +
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL- 774
H+NL++L G +V E GSL D LR G + A A G+ +L
Sbjct: 80 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 775 HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP---- 830
F IH D+ N+LL K+ DFGL R + + H VP
Sbjct: 139 SKRF----IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY---VMQEHRKVPFAWC 191
Query: 831 -SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
E + + D + FGV L E+ T G++P
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 1e-29
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ IG G F G VAVK + + F AE + ++H NLVQL
Sbjct: 195 LKLLQTIGKGEFGDVMLGDYRG-NKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQL 251
Query: 723 LGYCSVGEEKL-LVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFL-HHGFK 779
LG + L +V EYM GSL D+LR+R + L K + + +L + F
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF- 310
Query: 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPS-----EYG 834
+H D+ N+L+++ AKVSDFGL + + G +P E
Sbjct: 311 ---VHRDLAARNVLVSEDNVAKVSDFGLTK---------EASSTQDTGKLPVKWTAPEAL 358
Query: 835 QAGRANERGDIYSFGVILLELVT-GKQP 861
+ + + + D++SFG++L E+ + G+ P
Sbjct: 359 REKKFSTKSDVWSFGILLWEIYSFGRVP 386
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-29
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 662 IIVFENVIGGGGFRTAFKGTMPDQK---TVAVKKLSQATGQCDR-EFAAEMETLDMVKHQ 717
+++ + +G G F + +G +K VA+K L Q T + D E E + + + +
Sbjct: 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 396
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-HH 776
+V+L+G C E +LV E G L +L + + ++ + + G+ +L
Sbjct: 397 YIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK 455
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP-----S 831
F +H ++ N+LL + AK+SDFGL++ + +S+ TA + G P
Sbjct: 456 NF----VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY---TARSAGKWPLKWYAP 508
Query: 832 EYGQAGRANERGDIYSFGVILLELVT-GKQP 861
E + + R D++S+GV + E ++ G++P
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 2e-29
Identities = 58/222 (26%), Positives = 85/222 (38%), Gaps = 31/222 (13%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK------TVAVKKLSQATGQCDR-EFAAEMETLDMVK 715
I +G G F ++G + VAVK L + + D +F E +
Sbjct: 32 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 91
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR------AASLDWGKRCKIAYGAAR 769
HQN+V+ +G + ++ E M G L +LR +SL +A A
Sbjct: 92 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 770 GISFL-HHGFKPYIIHMDIKTSNILLNDYFE---AKVSDFGLARLISDCESHVSTDTADT 825
G +L + F IH DI N LL AK+ DFG+AR I
Sbjct: 152 GCQYLEENHF----IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS----YYRKGG 203
Query: 826 IGYVP-----SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
+P E G + D +SFGV+L E+ + G P
Sbjct: 204 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 2e-29
Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 31/222 (13%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK----TVAVK--KLSQATGQCDREFAAEMETLDMVKH 716
++ ++G G F + +G + + VAVK KL ++ + EF +E + H
Sbjct: 36 LILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSH 95
Query: 717 QNLVQLLGYCSVGE-----EKLLVYEYMVNGSLDDWLRNR-----AASLDWGKRCKIAYG 766
N+++LLG C + +++ +M G L +L + K
Sbjct: 96 PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVD 155
Query: 767 AARGISFL-HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT 825
A G+ +L + F +H D+ N +L D V+DFGL++ I + +
Sbjct: 156 IALGMEYLSNRNF----LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY----RQGR 207
Query: 826 IGYVP-----SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
I +P E + D+++FGV + E+ T G P
Sbjct: 208 IAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-29
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 38/226 (16%)
Query: 663 IVFENVIGGGGFRTAFKGTM---PDQKTVAVKKLSQATGQCDR-EFAAEMETLDMV-KHQ 717
I F++VIG G F K + + A+K++ + + D +FA E+E L + H
Sbjct: 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 86
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRC---------------K 762
N++ LLG C L EY +G+L D+LR
Sbjct: 87 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 763 IAYGAARGISFL-HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821
A ARG+ +L F IH D+ NIL+ + + AK++DFGL+R E +V
Sbjct: 147 FAADVARGMDYLSQKQF----IHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK- 198
Query: 822 TADTIGYVP-----SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
T+G +P E D++S+GV+L E+V+ G P
Sbjct: 199 ---TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 4e-29
Identities = 57/244 (23%), Positives = 92/244 (37%), Gaps = 70/244 (28%)
Query: 663 IVFENVIGGGGFRTAFKGTMPD------QKTVAVKKL-SQATGQCDREFAAEMETLDMV- 714
+ F +G G F + T VAVK L S A +E++ + +
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG 107
Query: 715 KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRC------------- 761
+H+N+V LLG C+ G L++ EY G L ++LR ++ L+
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 762 KIAYGAARGISFL--HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819
+ A+G++FL + IH D+ N+LL + AK+ DFGLAR I
Sbjct: 168 HFSSQVAQGMAFLASKN-----CIHRDVAARNVLLTNGHVAKIGDFGLARDI-------- 214
Query: 820 TDTADTIGYVPSEYGQAGRANERG---------------------DIYSFGVILLELVT- 857
S Y D++S+G++L E+ +
Sbjct: 215 --------MNDSNY----IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 262
Query: 858 GKQP 861
G P
Sbjct: 263 GLNP 266
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 4e-29
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 662 IIVFENVIGGGGFRTAFKGTMPDQK---TVAVKKLSQATGQCDR--EFAAEMETLDMVKH 716
+ + + +G G F T KG +K TVAVK L E AE + + +
Sbjct: 18 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN 77
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL-H 775
+V+++G C E +LV E G L+ +L+ + ++ + + G+ +L
Sbjct: 78 PYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEE 135
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP----- 830
F +H D+ N+LL AK+SDFGL++ + E++ A T G P
Sbjct: 136 SNF----VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY---KAQTHGKWPVKWYA 188
Query: 831 SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
E + + + D++SFGV++ E + G++P
Sbjct: 189 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 5e-29
Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 32/223 (14%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK----TVAVKKL-SQATGQCDRE-FAAEMETLDMVKH 716
++G G F + + + + VAVK L + D E F E + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 717 QNLVQLLGYCSVGEEK------LLVYEYMVNGSLDDWLRNR-----AASLDWGKRCKIAY 765
++ +L+G K +++ +M +G L +L +L +
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 766 GAARGISFL-HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD 824
A G+ +L F IH D+ N +L + V+DFGL+R I + +
Sbjct: 145 DIACGMEYLSSRNF----IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY----RQG 196
Query: 825 TIGYVP-----SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
+P E D+++FGV + E++T G+ P
Sbjct: 197 CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 8e-29
Identities = 61/247 (24%), Positives = 89/247 (36%), Gaps = 72/247 (29%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK------TVAVKKLSQATGQCDR-EFAAEMETLDMV- 714
+ F +G G F + T TVAVK L + +R +E++ L +
Sbjct: 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84
Query: 715 KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRC------------- 761
H N+V LLG C++G L++ EY G L ++LR + S K
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 762 ----KIAYGAARGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816
+Y A+G++FL IH D+ NILL K+ DFGLAR I
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDI----- 195
Query: 817 HVSTDTADTIGYVPSEYGQAGRANERG---------------------DIYSFGVILLEL 855
S Y D++S+G+ L EL
Sbjct: 196 -----------KNDSNY----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240
Query: 856 VT-GKQP 861
+ G P
Sbjct: 241 FSLGSSP 247
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 1e-28
Identities = 78/501 (15%), Positives = 151/501 (30%), Gaps = 85/501 (16%)
Query: 87 LSSLRILDLSKNLLFGQLSPQ-------VSNLKRLKMLSVGENQLSGSIPSQLGLLTRLE 139
L LS+N + +S ++ + N+ + L+ +
Sbjct: 5 LPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKE--CLINQFS 62
Query: 140 TISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGS 199
+ L + + +P L Q+ L+ + N L ++P L+ LD DN LS
Sbjct: 63 ELQLNRLNLS-SLPDNLP--PQITVLEITQNAL-ISLPELPA---SLEYLDACDNRLS-- 113
Query: 200 LPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIG 259
+L + SL +LDV NN L+ +P L+ +
Sbjct: 114 ---TLPELPASLKHLDVDNNQLT-MLPELPALLEYI------------------------ 145
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319
+ NN+L+ +P + L +++ N L + + +L L +
Sbjct: 146 --------NADNNQLTM-LPELPTS---LEVLSVRNNQL----TFLPELPESLEALDVST 189
Query: 320 NRISGSIPEYISELP-----LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLS 374
N + S+P F + N T IP ++ + + N L +
Sbjct: 190 NLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247
Query: 375 WEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTL 434
+S A + ++ N + + + +F +
Sbjct: 248 ESLSQQTAQPDYHGPRIYFSMSDGQQ--NTLHRPLADAVTAWFPENKQSDVSQIWHAFEH 305
Query: 435 DLGSNNLNGCVVVVYLLLNNNMLSG---KIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGD 491
+ +N + + + ++ SG ++ L +L+ L + D
Sbjct: 306 EEHANTFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFAVAADATESCED 365
Query: 492 SLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGL 551
+ + L L E G G L L L+ I
Sbjct: 366 RVALTWNNLRKTLLVHQASE-----------GLFDNDTGALLSLGREMFRLEILEDIARD 414
Query: 552 YVQSNKFYGEIPPELGNLVQL 572
V++ F EI L L
Sbjct: 415 KVRTLHFVDEIEVYLAFQTML 435
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 103 bits (257), Expect = 7e-23
Identities = 67/378 (17%), Positives = 113/378 (29%), Gaps = 122/378 (32%)
Query: 134 LLTRLETISLRSNSFTGEMPSELGDI----KQLKSLDFSGNGLNGTIPSRLGD--LTQLQ 187
+L SL NSF + D + + G N S L + + Q
Sbjct: 4 MLPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRN-EAVSLLKECLINQFS 62
Query: 188 DLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQL 247
+L L+ LS SLP +L + L +++ N L ++P +L+ L
Sbjct: 63 ELQLNRLNLS-SLPDNLPPQITVL---EITQNALI-SLPELPASLEYLD----------- 106
Query: 248 SLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFD 307
+N+LS +P SL +++D N L+ E
Sbjct: 107 ---------------------ACDNRLST-LPELP---ASLKHLDVDNNQLTMLPELP-- 139
Query: 308 RCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASN 367
L + NN+++ +PE + L +V ++ N T +P +
Sbjct: 140 --ALLEYINADNNQLT-MLPELPTSL--EVLSVRNNQLT-FLPELPES------------ 181
Query: 368 LLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGD 427
LE LD+S+N+L +P + +
Sbjct: 182 ---------------LEALDVSTNLLE-SLPAVPVRNHHSEET----------------- 208
Query: 428 CISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPP 487
N + IP ++ L T+ L N L+ S
Sbjct: 209 ---EIFFRCRENRIT-----------------HIPENILSLDPTCTIILEDNPLS-SRIR 247
Query: 488 EFGDSLKVQGLYLGHNQL 505
E Q Y G
Sbjct: 248 ESLSQQTAQPDYHGPRIY 265
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 8e-23
Identities = 49/252 (19%), Positives = 85/252 (33%), Gaps = 39/252 (15%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
++ L L++ L L + ++ +L + +N L S+P L L+
Sbjct: 53 LKECLINQFSELQLNRLNL-SSLPDNL--PPQITVLEITQNALI-SLPELPASLEYLD-- 106
Query: 142 SLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201
N + +P LK LD N L +P L+ ++ +N L+
Sbjct: 107 -ACDNRLS-TLPELPA---SLKHLDVDNNQLT-MLPELPA---LLEYINADNNQLT---- 153
Query: 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKL--SDLYLGIGPYQLSLFVGRITPEIG 259
L + SL L V NN L+ +P +L+ L S L P
Sbjct: 154 -MLPELPTSLEVLSVRNNQLTF-LPELPESLEALDVSTNLLESLP-----------AVPV 200
Query: 260 NCSMLK----YISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSEL 315
+ + N+++ IP + + I L+ N LS I + + T +
Sbjct: 201 RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDY 259
Query: 316 VLVNNRISGSIP 327
S S
Sbjct: 260 HGPRIYFSMSDG 271
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 100 bits (249), Expect = 6e-22
Identities = 60/326 (18%), Positives = 92/326 (28%), Gaps = 68/326 (20%)
Query: 309 CTNLSEL--VLVNNRISGSIPEYISELP----LKVFDLQYNNFTGVIPVSLWNSENLMEF 362
N L N ISG+ +Y S + N ++ L N E
Sbjct: 7 INNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECLIN--QFSEL 64
Query: 363 NAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIP 422
L SL + + L+++ N L +P+ +L L N +P
Sbjct: 65 QLNRLNLS-SLPDNLPPQ--ITVLEITQNALI-SLPELPASLEY---LDACDNRLS-TLP 116
Query: 423 MEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT 482
SL LD+ +N L +P L +N N LT
Sbjct: 117 ELPA---SLKHLDVDNNQLT-----------------MLPELP---ALLEYINADNNQLT 153
Query: 483 GSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG-----YLSGNKLYGSVPTSFGNLNGLT- 536
+P SL+V L + +NQLT +PE +S N L S+P +
Sbjct: 154 -MLPELPT-SLEV--LSVRNNQLT-FLPELPESLEALDVSTNLL-ESLPAVPVRNHHSEE 207
Query: 537 ---HLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSL 593
N + IP + +L + N L I E L
Sbjct: 208 TEIFFRCRENRIT--------------HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253
Query: 594 PYLLYLNLADNRLEGEVPRSGICQNL 619
+ +
Sbjct: 254 TAQPDYHGPRIYFSMSDGQQNTLHRP 279
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 1e-28
Identities = 58/222 (26%), Positives = 86/222 (38%), Gaps = 31/222 (13%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK------TVAVKKLSQATGQCDR-EFAAEMETLDMVK 715
I +G G F ++G + VAVK L + + D +F E +
Sbjct: 73 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 132
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR------AASLDWGKRCKIAYGAAR 769
HQN+V+ +G + ++ E M G L +LR +SL +A A
Sbjct: 133 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192
Query: 770 GISFL-HHGFKPYIIHMDIKTSNILLNDYFE---AKVSDFGLARLISDCESHVSTDTADT 825
G +L + F IH DI N LL AK+ DFG+AR I +
Sbjct: 193 GCQYLEENHF----IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY----RKGG 244
Query: 826 IGYVP-----SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
+P E G + D +SFGV+L E+ + G P
Sbjct: 245 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 286
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-28
Identities = 59/253 (23%), Positives = 90/253 (35%), Gaps = 79/253 (31%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK------TVAVKKLSQATGQCDR-EFAAEMETLDMVK 715
+V +G G F K T K TVAVK L + + + +E L V
Sbjct: 25 LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRC-------------- 761
H ++++L G CS LL+ EY GSL +LR
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 762 ---------KIAYGAARGISFL--HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810
A+ ++G+ +L ++H D+ NIL+ + + K+SDFGL+R
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMK-----LVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 811 ISDCESHVSTDTADTIGYVPSEYGQAGRANERG---------------------DIYSFG 849
+ Y Y +G D++SFG
Sbjct: 200 V----------------YEEDSY----VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFG 239
Query: 850 VILLELVT-GKQP 861
V+L E+VT G P
Sbjct: 240 VLLWEIVTLGGNP 252
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 3e-28
Identities = 57/248 (22%), Positives = 89/248 (35%), Gaps = 74/248 (29%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK--------TVAVKKLSQATGQCDR-EFAAEMETLDM 713
+ +G G F TVAVK L + D + +EME + M
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM 96
Query: 714 V-KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR---------------AASLDW 757
+ KH+N++ LLG C+ ++ EY G+L ++LR R + +
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 758 GKRCKIAYGAARGISFL--HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815
Y ARG+ +L IH D+ N+L+ + K++DFGLAR I
Sbjct: 157 KDLVSCTYQLARGMEYLASQK-----CIHRDLAARNVLVTENNVMKIADFGLARDI---- 207
Query: 816 SHVSTDTADTIGYVPSEYGQAGRANERG---------------------DIYSFGVILLE 854
Y + G D++SFGV++ E
Sbjct: 208 ------------NNIDYY----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 251
Query: 855 LVT-GKQP 861
+ T G P
Sbjct: 252 IFTLGGSP 259
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 6e-28
Identities = 62/300 (20%), Positives = 112/300 (37%), Gaps = 26/300 (8%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQL 186
+P L + L++N T + ++K L +L N ++ P L +L
Sbjct: 45 KVPK--DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 102
Query: 187 QDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGPY 245
+ L LS N L LP + K LQ L V N ++ + + L ++ + LG
Sbjct: 103 ERLYLSKNQLK-ELPEKMPKTLQE---LRVHENEIT-KVRKSVFNGLNQMIVVELG---- 153
Query: 246 QLSLFVGRITPEI-GNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIED 304
L I L YI +++ ++ IP+ L SL E++LDGN ++
Sbjct: 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAA 210
Query: 305 VFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFN 363
NL++L L N IS ++ P L+ L N +P L + + +
Sbjct: 211 SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269
Query: 364 AASNLLEG------SLSWEISNAVALEKLDLSSNMLT-RQIPKKI-GNLTNIQILKLNSN 415
+N + + + + L SN + +I + ++L +
Sbjct: 270 LHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 2e-26
Identities = 60/325 (18%), Positives = 106/325 (32%), Gaps = 57/325 (17%)
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323
+ L NNK++ + N +L + L N +S F L L L N++
Sbjct: 54 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 113
Query: 324 GSIPEYISELP--LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAV 381
+P ++P L+ + N T V ++ +N L+ S I N
Sbjct: 114 -ELP---EKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLK---SSGIENGA 166
Query: 382 -----ALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDL 436
L + ++ +T IP+ G ++ L L+ N + +L L L
Sbjct: 167 FQGMKKLSYIRIADTNITT-IPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGL 223
Query: 437 GSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQ 496
+ N +S GSL+ +L L+L N L +P D +Q
Sbjct: 224 ----------------SFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQ 266
Query: 497 GLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSN 556
+YL +N ++ +I + P + + L N +
Sbjct: 267 VVYLHNNNIS-AIGSND---------FCPPGYNTKKASYSGVSLFSNPVQ---------- 306
Query: 557 KFYGEIPPEL-GNLVQLEYLDFSMN 580
Y EI P + +
Sbjct: 307 --YWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 1e-25
Identities = 60/266 (22%), Positives = 93/266 (34%), Gaps = 35/266 (13%)
Query: 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN 442
LDL +N +T NL N+ L L +N I P F + L L L N L
Sbjct: 54 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 113
Query: 443 GCVVVV-----YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS-IPPE-FGDSLKV 495
+ L ++ N ++ + L + + L N L S I F K+
Sbjct: 114 ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKL 173
Query: 496 QGLYLGHNQLTG---SIPESLG--YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVG 550
+ + +T +P SL +L GNK+ S LN L L LS N + +
Sbjct: 174 SYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV-- 231
Query: 551 LYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEV 610
+ N L L + N L +P L Y+ + L +N + +
Sbjct: 232 ---DNGSLA--------NTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS-AI 278
Query: 611 PRSGICQ--------NLSIISLTGNK 628
+ C + S +SL N
Sbjct: 279 GSNDFCPPGYNTKKASYSGVSLFSNP 304
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 1e-21
Identities = 52/248 (20%), Positives = 96/248 (38%), Gaps = 27/248 (10%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQ-LGLLTRLETISLR 144
L L L LSKN L +L ++ K L+ L V EN+++ + L ++ + L
Sbjct: 98 PLVKLERLYLSKNQL-KELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLNQMIVVELG 153
Query: 145 SNSFTGEM--PSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPV 202
+N +K+L + + + TIP L L +L L N ++ +
Sbjct: 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKIT-KVDA 209
Query: 203 SLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGPYQLSLFVGRITPEIGNC 261
+ LK L +L+ L +S N +S + N L +L+L +L ++ + +
Sbjct: 210 ASLKGLNNLAKLGLSFNSIS-AVDNGSLANTPHLRELHLNNN--KLV----KVPGGLADH 262
Query: 262 SMLKYISLSNNKLSG------PIPRELCNSGSLVEINLDGNMLSGTI--EDVFDRCTNLS 313
++ + L NN +S P S ++L N + F +
Sbjct: 263 KYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRA 322
Query: 314 ELVLVNNR 321
+ L N +
Sbjct: 323 AVQLGNYK 330
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-11
Identities = 42/191 (21%), Positives = 73/191 (38%), Gaps = 35/191 (18%)
Query: 450 LLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE-FGDSLKVQGLYLGHNQLTGS 508
+ ++ L K+P L + L+L N +T I F + + L L +N+++
Sbjct: 36 VQCSDLGLE-KVPKDLP--PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKIS-K 90
Query: 509 IPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVG--------LYVQSNKFYG 560
I P +F L L L LS N+L + L V N+
Sbjct: 91 IS---------------PGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEIT- 134
Query: 561 EIPPE-LGNLVQLEYLDFSMNML-DGHIPEK-LCSLPYLLYLNLADNRLEGEVPRSGICQ 617
++ L Q+ ++ N L I + L Y+ +AD + +P G+
Sbjct: 135 KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIP-QGLPP 192
Query: 618 NLSIISLTGNK 628
+L+ + L GNK
Sbjct: 193 SLTELHLDGNK 203
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 6e-28
Identities = 57/248 (22%), Positives = 90/248 (36%), Gaps = 74/248 (29%)
Query: 663 IVFENVIGGGGFRTAFKGT--------MPDQKTVAVKKLSQATGQCDR-EFAAEMETLDM 713
+ +G G F + TVAVK L + D + +EME + M
Sbjct: 83 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM 142
Query: 714 V-KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR---------------AASLDW 757
+ KH+N++ LLG C+ ++ EY G+L ++LR R + +
Sbjct: 143 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 758 GKRCKIAYGAARGISFL--HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815
Y ARG+ +L IH D+ N+L+ + K++DFGLAR I
Sbjct: 203 KDLVSCTYQLARGMEYLASQK-----CIHRDLAARNVLVTENNVMKIADFGLARDI---- 253
Query: 816 SHVSTDTADTIGYVPSEYGQAGRANERG---------------------DIYSFGVILLE 854
Y + G D++SFGV++ E
Sbjct: 254 ------------NNIDYY----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 297
Query: 855 LVT-GKQP 861
+ T G P
Sbjct: 298 IFTLGGSP 305
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 1e-27
Identities = 54/253 (21%), Positives = 88/253 (34%), Gaps = 79/253 (31%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK------TVAVKKLSQATGQCDR-EFAAEMETLDMV- 714
+ F V+G G F T VAVK L + +R +E++ + +
Sbjct: 47 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG 106
Query: 715 KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRC------------- 761
H+N+V LLG C++ L++EY G L ++LR++ +
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 762 ---------KIAYGAARGISFL--HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810
AY A+G+ FL +H D+ N+L+ K+ DFGLAR
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKS-----CVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 811 ISDCESHVSTDTADTIGYVPSEYGQAGRANERG---------------------DIYSFG 849
I S Y D++S+G
Sbjct: 222 I----------------MSDSNY----VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYG 261
Query: 850 VILLELVT-GKQP 861
++L E+ + G P
Sbjct: 262 ILLWEIFSLGVNP 274
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-27
Identities = 63/239 (26%), Positives = 99/239 (41%), Gaps = 51/239 (21%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK------TVAVKKL-SQATGQCDREFAAEMETLDMVK 715
I + IG G F F+ P VAVK L +A+ +F E +
Sbjct: 49 IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD 108
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRC-------------- 761
+ N+V+LLG C+VG+ L++EYM G L+++LR+ +
Sbjct: 109 NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 762 ---------KIAYGAARGISFL--HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810
IA A G+++L +H D+ T N L+ + K++DFGL+R
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLSERK-----FVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 811 ISDCESHVSTD--TADTIGYVP-----SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
I S D AD +P E R D++++GV+L E+ + G QP
Sbjct: 224 I------YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-27
Identities = 62/234 (26%), Positives = 95/234 (40%), Gaps = 46/234 (19%)
Query: 663 IVFENVIGGGGFRTAFKGTMPD--------QKTVAVKKLSQATGQCDR-EFAAEMETLDM 713
+V +G G F VAVK L + D + +EME + M
Sbjct: 71 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 130
Query: 714 V-KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRC---------- 761
+ KH+N++ LLG C+ ++ EY G+L ++L+ R L++
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 762 ----KIAYGAARGISFL--HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815
AY ARG+ +L IH D+ N+L+ + K++DFGLAR I
Sbjct: 191 KDLVSCAYQVARGMEYLASKK-----CIHRDLAARNVLVTEDNVMKIADFGLARDIHH-- 243
Query: 816 SHVSTD--TADTIGYVP-----SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
D T G +P E + D++SFGV+L E+ T G P
Sbjct: 244 ----IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 7e-27
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 669 IGGGGFRTAFKGTMPDQK---TVAVKKLSQATGQCDREFAA----EMETLDMVKHQNLVQ 721
+GGGG T + D VA+K + + E E+ + HQN+V
Sbjct: 19 LGGGGMSTVYLAE--DTILNIKVAIKAIFIPPRE-KEETLKRFEREVHNSSQLSHQNIVS 75
Query: 722 LLGYCSVGEEKLLVY---EYMVNG-SLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-H 776
++ V EE Y EY + G +L +++ + L GI H
Sbjct: 76 MI---DVDEEDDCYYLVMEY-IEGPTLSEYIESHGP-LSVDTAINFTNQILDGIKHAHDM 130
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG---YVPSEY 833
I+H DIK NIL++ K+ DFG+A+ +S+ T T +G Y E
Sbjct: 131 R----IVHRDIKPQNILIDSNKTLKIFDFGIAKALSE---TSLTQTNHVLGTVQYFSPEQ 183
Query: 834 GQAGRANERGDIYSFGVILLELVTGKQP 861
+ +E DIYS G++L E++ G+ P
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPP 211
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 1e-26
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 665 FENVIGGGGFRTAFKGTMPDQKT---VAVK--KLSQATGQCDREFAAEMETLDMVKHQNL 719
F+ IG G F+T +KG D +T VA + + T + F E E L ++H N+
Sbjct: 30 FDIEIGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 87
Query: 720 VQLLGYCSVGEEK----LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
V+ + +LV E M +G+L +L+ R + +G+ FLH
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQILKGLQFLH 146
Query: 776 HGFKPYIIHMDIKTSNILLNDYF-EAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834
P IIH D+K NI + K+ D GLA L + T ++ E
Sbjct: 147 -TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEFMAPEMY 202
Query: 835 QAGRANERGDIYSFGVILLELVTGKQP 861
+ +E D+Y+FG+ +LE+ T + P
Sbjct: 203 EEK-YDESVDVYAFGMCMLEMATSEYP 228
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 1e-26
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 32/212 (15%)
Query: 669 IGGGGFRTAFKGTMPDQK---TVAVKKLSQATGQCDREFAA----EMETLDMVKHQNLVQ 721
+G GG D + VAVK L + D F E + + H +V
Sbjct: 20 LGFGGMSEVHLAR--DLRDHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAALNHPAIVA 76
Query: 722 LLGYCSVGEEKL-------LVYEYMVNG-SLDDWLRNRAASLDWGKRCKIAYGAARGISF 773
+ GE + +V EY V+G +L D + + + ++ A + ++F
Sbjct: 77 VY---DTGEAETPAGPLPYIVMEY-VDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNF 131
Query: 774 LH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG---YV 829
H +G IIH D+K +NI+++ KV DFG+AR I+D + V T TA IG Y+
Sbjct: 132 SHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYL 186
Query: 830 PSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
E + + R D+YS G +L E++TG+ P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 2e-26
Identities = 56/246 (22%), Positives = 88/246 (35%), Gaps = 71/246 (28%)
Query: 663 IVFENVIGGGGFRTAFKGT------MPDQKTVAVKKLSQATGQCDR-EFAAEMETLDMV- 714
+ +G G F + +TVAVK L + + +E++ L +
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 715 KHQNLVQLLGYCSVGEEKLLV-YEYMVNGSLDDWLRNRAASLDWGKRC------------ 761
H N+V LLG C+ L+V E+ G+L +LR++ K
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 762 ---KIAYGAARGISFL-HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817
++ A+G+ FL IH D+ NILL++ K+ DFGLAR I
Sbjct: 149 HLICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDI------ 198
Query: 818 VSTDTADTIGYVPSEYGQAGRANERG---------------------DIYSFGVILLELV 856
Y +Y D++SFGV+L E+
Sbjct: 199 ----------YKDPDY----VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
Query: 857 T-GKQP 861
+ G P
Sbjct: 245 SLGASP 250
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 3e-26
Identities = 61/267 (22%), Positives = 95/267 (35%), Gaps = 38/267 (14%)
Query: 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN 442
LDL +N ++ L ++ L L +N I F L L + N+L
Sbjct: 56 TTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV 115
Query: 443 GCVV-----VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT-GSIPPEFGDSLKVQ 496
+V L +++N + G S L N+ + + GN L P D LK+
Sbjct: 116 EIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLN 175
Query: 497 GLYLGHNQLTG---SIPESLG--YLSGNKLYGSVPT-SFGNLNGLTHLDLSCNELDGIVG 550
L + +LTG +PE+L +L NK+ ++ + L L L N++
Sbjct: 176 YLRISEAKLTGIPKDLPETLNELHLDHNKI-QAIELEDLLRYSKLYRLGLGHNQIR---- 230
Query: 551 LYVQSNKFYGEIPPE-LGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGE 609
I L L L L N L +P L L L + L N + +
Sbjct: 231 ----------MIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-K 278
Query: 610 VPRSGICQ--------NLSIISLTGNK 628
V + C + ISL N
Sbjct: 279 VGVNDFCPVGFGVKRAYYNGISLFNNP 305
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 8e-26
Identities = 58/301 (19%), Positives = 118/301 (39%), Gaps = 29/301 (9%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQ 185
++P + + L++N + + ++ L +L N ++ I + L +
Sbjct: 47 AVPK--EISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS-KIHEKAFSPLRK 103
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGP 244
LQ L +S N L +P +L +L L + +N + +P + L+ ++ + +G
Sbjct: 104 LQKLYISKNHLV-EIPPNLPSSLV---ELRIHDNRIR-KVPKGVFSGLRNMNCIEMG--- 155
Query: 245 YQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIED 304
L P + L Y+ +S KL+G IP++L +L E++LD N + +
Sbjct: 156 -GNPLENSGFEPGAFDGLKLNYLRISEAKLTG-IPKDL--PETLNELHLDHNKIQAIELE 211
Query: 305 VFDRCTNLSELVLVNNRISGSIPEYI-SELP-LKVFDLQYNNFTGVIPVSLWNSENLMEF 362
R + L L L +N+I I S LP L+ L N + +P L + + L
Sbjct: 212 DLLRYSKLYRLGLGHNQIR-MIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVV 269
Query: 363 NAASNLLEG------SLSWEISNAVALEKLDLSSNMLT-RQIPKKI-GNLTNIQILKLNS 414
+N + + L +N + ++ +T+ ++ +
Sbjct: 270 YLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGN 329
Query: 415 N 415
Sbjct: 330 Y 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-25
Identities = 58/299 (19%), Positives = 90/299 (30%), Gaps = 43/299 (14%)
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323
+ L NN +S + L + L N +S E F L +L + N +
Sbjct: 56 TTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV 115
Query: 324 GSIPEYISELP--LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLL-EGSLSWEISNA 380
IP LP L + N V N+ N L +
Sbjct: 116 -EIP---PNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG 171
Query: 381 VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNN 440
+ L L +S LT IPK + L L+ N I + L L LG N
Sbjct: 172 LKLNYLRISEAKLT-GIPK--DLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQ 228
Query: 441 L--------NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE---- 488
+ + + L L+NN LS ++P L L L + L N +T +
Sbjct: 229 IRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KVGVNDFCP 286
Query: 489 ---FGDSLKVQGLYLGHNQLT-GSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCN 543
G+ L +N + + P +F + +
Sbjct: 287 VGFGVKRAYYNGISLFNNPVPYWEVQ---------------PATFRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 9e-24
Identities = 77/381 (20%), Positives = 129/381 (33%), Gaps = 90/381 (23%)
Query: 247 LSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVF 306
L + P +C L+ + S+ L +P+E+ S ++L N +S +D F
Sbjct: 19 LPPTYSAMCPFGCHCH-LRVVQCSDLGLKA-VPKEI--SPDTTLLDLQNNDISELRKDDF 74
Query: 307 DRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAAS 366
+L LVLVNN+ IS++ K F
Sbjct: 75 KGLQHLYALVLVNNK--------ISKIHEKAF---------------------------- 98
Query: 367 NLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426
S L+KL +S N L +IP + +++ L+++ N + F
Sbjct: 99 -----------SPLRKLQKLYISKNHLV-EIPPNL--PSSLVELRIHDNRIRKVPKGVFS 144
Query: 427 DCISLNTLDLGSNNLNGCVV---------VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLF 477
++N +++G N L + YL ++ L+ IP L L L+L
Sbjct: 145 GLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT-GIPKDL--PETLNELHLD 201
Query: 478 GNLLTGSIPPE-FGDSLKVQGLYLGHNQLTGSIP----------ESLGYLSGNKLYGSVP 526
N + +I E K+ L LGHNQ+ I L +L NKL VP
Sbjct: 202 HNKIQ-AIELEDLLRYSKLYRLGLGHNQIR-MIENGSLSFLPTLREL-HLDNNKLS-RVP 257
Query: 527 TSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLD-GH 585
+L L + L N + V N F + N +
Sbjct: 258 AGLPDLKLLQVVYLHTNNIT-----KVGVNDFCP--VGFGVKRAYYNGISLFNNPVPYWE 310
Query: 586 IPEKL-CSLPYLLYLNLADNR 605
+ + L + + +
Sbjct: 311 VQPATFRCVTDRLAIQFGNYK 331
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 4e-22
Identities = 55/248 (22%), Positives = 94/248 (37%), Gaps = 26/248 (10%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144
L L L L N + ++ + S L++L+ L + +N L IP L + L + +
Sbjct: 76 GLQHLYALVLVNNKI-SKIHEKAFSPLRKLQKLYISKNHLV-EIPP--NLPSSLVELRIH 131
Query: 145 SNSFTGEMPSELGDIKQLKSLDFSGNGL-NGTIPSRLGDLTQLQDLDLSDNLLSGSLPVS 203
N ++ + ++ GN L N D +L L +S+ L+ +P
Sbjct: 132 DNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT-GIPKD 190
Query: 204 LLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGPYQLSLFVGRITPEI-GNC 261
L + L L + +N + I E KL L LG Q+ I
Sbjct: 191 LPETLNE---LHLDHNKIQ-AIELEDLLRYSKLYRLGLGHN--QIR----MIENGSLSFL 240
Query: 262 SMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVF------DRCTNLSEL 315
L+ + L NNKLS +P L + L + L N ++ + F + + +
Sbjct: 241 PTLRELHLDNNKLSR-VPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGI 299
Query: 316 VLVNNRIS 323
L NN +
Sbjct: 300 SLFNNPVP 307
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 3e-19
Identities = 47/248 (18%), Positives = 84/248 (33%), Gaps = 28/248 (11%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
L L+ L +SKN L ++ P + L L + +N++ L + I +
Sbjct: 100 PLRKLQKLYISKNHL-VEIPPNL--PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGG 156
Query: 146 NSFTGEM-PSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSL 204
N D +L L S L IP L L +L L N + ++ +
Sbjct: 157 NPLENSGFEPGAFDGLKLNYLRISEAKLT-GIPKDL--PETLNELHLDHNKIQ-AIELED 212
Query: 205 LKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGPY-QLSLFVGRITPEIGNCS 262
L L L + +N + I L L +L+L +LS R+ + +
Sbjct: 213 LLRYSKLYRLGLGHNQIR-MIENGSLSFLPTLRELHLD---NNKLS----RVPAGLPDLK 264
Query: 263 MLKYISLSNNKLSGPIPRE-------LCNSGSLVEINLDGNMLSGTI--EDVFDRCTNLS 313
+L+ + L N ++ + I+L N + F T+
Sbjct: 265 LLQVVYLHTNNITK-VGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRL 323
Query: 314 ELVLVNNR 321
+ N +
Sbjct: 324 AIQFGNYK 331
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 2e-14
Identities = 32/172 (18%), Positives = 60/172 (34%), Gaps = 15/172 (8%)
Query: 79 PVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQ-LGLLTR 137
P F+ L L +S+ L + L L + N++ +I + L ++
Sbjct: 163 GFEPGAFDGLKLNYLRISEAKL---TGIPKDLPETLNELHLDHNKIQ-AIELEDLLRYSK 218
Query: 138 LETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLS 197
L + L N L + L+ L N L+ +P+ L DL LQ + L N ++
Sbjct: 219 LYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT 277
Query: 198 GSLP------VSLLKNLQSLSYLDVSNNLLS-GNIPPEI-GNLKKLSDLYLG 241
+ V + + + NN + + P + + G
Sbjct: 278 -KVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFG 328
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 1e-25
Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 32/294 (10%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRL-GDLTQ 185
SIPS GL ++++ L +N T S+L L++L + NG+N TI L
Sbjct: 45 SIPS--GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGS 101
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI--GNLKKLSDLYLGIG 243
L+ LDLS N LS +L S K L SL++L++ N + +L KL L +G
Sbjct: 102 LEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVG-N 158
Query: 244 PYQLSLFVGRITPEI-GNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTI 302
+ +I + + L+ + + + L P+ L + ++ + L +
Sbjct: 159 MDTFT----KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLL 214
Query: 303 EDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEF 362
E D +++ L L + + + SEL + SL
Sbjct: 215 EIFVDVTSSVECLELRDTDLDTF---HFSELSTGETN------------SLIKKFTFRNV 259
Query: 363 NAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI-GNLTNIQILKLNSN 415
L + ++ L +L+ S N L +P I LT++Q + L++N
Sbjct: 260 KITDESLF-QVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 9e-25
Identities = 54/287 (18%), Positives = 105/287 (36%), Gaps = 30/287 (10%)
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323
+K + LSNN+++ +L +L + L N ++ ED F +L L L N +S
Sbjct: 54 VKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS 113
Query: 324 GSIPEYI-SELP-LKVFDLQYNNFTGVIPVSLWNS-ENLMEFNAASNLLEGSLSWEI-SN 379
++ L L +L N + + SL++ L + + + +
Sbjct: 114 -NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAG 172
Query: 380 AVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439
LE+L++ ++ L PK + ++ N+ L L+ ++ + S+ L+L
Sbjct: 173 LTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDT 232
Query: 440 NLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLY 499
+L+ + + LS SL + + + L + + L
Sbjct: 233 DLDT--------FHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELE 283
Query: 500 LGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELD 546
NQL S+P+ + F L L + L N D
Sbjct: 284 FSRNQLK-SVPDGI---------------FDRLTSLQKIWLHTNPWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 4e-23
Identities = 49/245 (20%), Positives = 98/245 (40%), Gaps = 13/245 (5%)
Query: 84 LFNLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQL-GLLTRLETI 141
L +L+ L L+ N + + S+L L+ L + N LS ++ S L+ L +
Sbjct: 72 LQRCVNLQALVLTSNGI-NTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFL 129
Query: 142 SLRSNSFTGEMPSEL-GDIKQLKSLDFSGNGLNGTIPSR-LGDLTQLQDLDLSDNLLSGS 199
+L N + + L + +L+ L I + LT L++L++ + L S
Sbjct: 130 NLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ-S 188
Query: 200 LPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLG---IGPYQLSLFVGRIT 255
LK++Q++S+L + + + L L + + S T
Sbjct: 189 YEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGET 247
Query: 256 PEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSEL 315
+ + + +++ L + + L L+E+ N L + +FDR T+L ++
Sbjct: 248 NSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKI 306
Query: 316 VLVNN 320
L N
Sbjct: 307 WLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 6e-21
Identities = 60/299 (20%), Positives = 101/299 (33%), Gaps = 54/299 (18%)
Query: 387 DLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL----- 441
SS L IP + ++ L L++N I + C++L L L SN +
Sbjct: 37 KGSSGSLNS-IPSGL--TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEE 93
Query: 442 ---NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE--FGDSLKVQ 496
+ + +L L+ N LS L++LT LNL GN ++ F K+Q
Sbjct: 94 DSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQ 152
Query: 497 GLYLGHNQLTGSIPE----SLG-----YLSGNKLYGSVPTSFGNLNGLTHLDLSCNEL-- 545
L +G+ I L + + L P S ++ ++HL L +
Sbjct: 153 ILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL 212
Query: 546 ------DGIVGL-----------YVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPE 588
D + ++ L + + L + +
Sbjct: 213 LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESL-FQVMK 271
Query: 589 KLCSLPYLLYLNLADNRLEGEVPRSGICQNLS---IISLTGNKDLCEKIMGSDCQILTF 644
L + LL L + N+L+ VP GI L+ I L N C C + +
Sbjct: 272 LLNQISGLLELEFSRNQLKS-VPD-GIFDRLTSLQKIWLHTNPWDC------SCPRIDY 322
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 9e-20
Identities = 71/385 (18%), Positives = 118/385 (30%), Gaps = 103/385 (26%)
Query: 261 CSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNN 320
C S+ L+ IP L + ++ ++L N ++ RC NL LVL +N
Sbjct: 30 CDRNGICKGSSGSLNS-IPSGL--TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSN 86
Query: 321 RISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNA 380
I+ + F +
Sbjct: 87 GIN--------TIEEDSFS---------------------------------------SL 99
Query: 381 VALEKLDLSSNMLTRQIPKKI-GNLTNIQILKLNSNFFDGIIPME-FGDCISLNTLDLGS 438
+LE LDLS N L+ + L+++ L L N + + F L L +G+
Sbjct: 100 GSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGN 158
Query: 439 NN---------LNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEF 489
+ G + L ++ + L P SL + N++ L L + F
Sbjct: 159 MDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIF 217
Query: 490 GDSL-KVQGLYLGHNQLTGSIPESLG----------------YLSGNKLYGSVPTSFGNL 532
D V+ L L L L ++ L+ V +
Sbjct: 218 VDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQI 276
Query: 533 NGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPE-LGNLVQLEYLDFSMNMLDGHIPEKLC 591
+GL L+ S N+L +P L L+ + N D C
Sbjct: 277 SGLLELEFSRNQLKS--------------VPDGIFDRLTSLQKIWLHTNPWD-------C 315
Query: 592 SLPYLLYLNLADNRLEGEVPRSGIC 616
S P + YL+ N+ + S C
Sbjct: 316 SCPRIDYLSRWLNKNSQKEQGSAKC 340
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 9e-15
Identities = 42/225 (18%), Positives = 73/225 (32%), Gaps = 45/225 (20%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV--SNLKRLKMLSVGENQLSGSIPSQ-LGLLTRLETIS 142
LSSL L+L N L S+L +L++L VG I + LT LE +
Sbjct: 122 PLSSLTFLNLLGNPY-KTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELE 180
Query: 143 LRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-LTQLQDLDLSDNLLSGSLP 201
+ ++ P L I+ + L + D + ++ L+L D L
Sbjct: 181 IDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHF 239
Query: 202 VSL-------LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRI 254
L L + + +++ L + + + L +L
Sbjct: 240 SELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELE--------------- 283
Query: 255 TPEIGNCSMLKYISLSNNKLSGPIPRELCNS-GSLVEINLDGNML 298
S N+L +P + + SL +I L N
Sbjct: 284 --------------FSRNQLKS-VPDGIFDRLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 21/149 (14%), Positives = 43/149 (28%), Gaps = 35/149 (23%)
Query: 80 VSPFLF-NLSSLRILDLSKNLL-------FGQLSP-QVSNLKRLKMLSVGENQLSGSIPS 130
P ++ ++ L L S + L+ + + ++LS +
Sbjct: 189 YEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETN 248
Query: 131 QLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLD 190
L + + S + L ++ L +L+
Sbjct: 249 SLIKKFTFRNVKITDESLF-------------------------QVMKLLNQISGLLELE 283
Query: 191 LSDNLLSGSLPVSLLKNLQSLSYLDVSNN 219
S N L S+P + L SL + + N
Sbjct: 284 FSRNQLK-SVPDGIFDRLTSLQKIWLHTN 311
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 5e-25
Identities = 52/211 (24%), Positives = 83/211 (39%), Gaps = 30/211 (14%)
Query: 666 ENVIGGGGFRTAFKGTMPDQK---TVAVKKLSQATGQCDREFAA----EMETLDMVKHQN 718
++G GG ++ D VA+K +S+ D F E T ++ +
Sbjct: 39 RRLVGRGGMGDVYEAE--DTVRERIVALKLMSETLSS-DPVFRTRMQREARTAGRLQEPH 95
Query: 719 LVQLLGYCSVGEEKLLVY---EYMVNG-SLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
+V + + GE +Y +NG L LR + L + I +
Sbjct: 96 VVPI--H-DFGEIDGQLYVDMRL-INGVDLAAMLRRQGP-LAPPRAVAIVRQIGSALDAA 150
Query: 775 H-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG---YVP 830
H G H D+K NIL++ A + DFG+A +D + T +T+G Y+
Sbjct: 151 HAAG----ATHRDVKPENILVSADDFAYLVDFGIASATTD--EKL-TQLGNTVGTLYYMA 203
Query: 831 SEYGQAGRANERGDIYSFGVILLELVTGKQP 861
E A R DIY+ +L E +TG P
Sbjct: 204 PERFSESHATYRADIYALTCVLYECLTGSPP 234
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 6e-25
Identities = 43/211 (20%), Positives = 69/211 (32%), Gaps = 39/211 (18%)
Query: 668 VIGGGGFRTAFKG--TMPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQLLG 724
I GG + + + V +K L + + AE + L V H ++VQ+
Sbjct: 87 CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146
Query: 725 YCSVGEEKL--------LVYEYMVNG-SLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
+ E +V EY V G SL + L + +S+LH
Sbjct: 147 F---VEHTDRHGDPVGYIVMEY-VGGQSLKRSKGQK---LPVAEAIAYLLEILPALSYLH 199
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG---YVPS 831
G +++ D+K NI+L + + K+ D G I G +
Sbjct: 200 SIG----LVYNDLKPENIMLTEE-QLKLIDLGAVSRI--------NSFGYLYGTPGFQAP 246
Query: 832 EYGQA-GRANERGDIYSFGVILLELVTGKQP 861
E DIY+ G L L
Sbjct: 247 E--IVRTGPTVATDIYTVGRTLAALTLDLPT 275
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 1e-24
Identities = 61/246 (24%), Positives = 97/246 (39%), Gaps = 18/246 (7%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQ 185
+P G+ T ++L N + ++ L+ L S N + TI L
Sbjct: 57 EVPD--GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLAN 113
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGP 244
L L+L DN L+ ++P L L L + NN + +IP + L L LG
Sbjct: 114 LNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELK 171
Query: 245 YQLSLFVGRITPEI-GNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE 303
+LS I+ S L+Y++L+ L IP L L E++L GN LS
Sbjct: 172 -RLS----YISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRP 224
Query: 304 DVFDRCTNLSELVLVNNRISGSIPEY-ISELP-LKVFDLQYNNFTGVIPVSLWNSENLME 361
F +L +L ++ ++I I L L +L +NN T + +L
Sbjct: 225 GSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLER 283
Query: 362 FNAASN 367
+ N
Sbjct: 284 IHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 3e-24
Identities = 67/304 (22%), Positives = 105/304 (34%), Gaps = 61/304 (20%)
Query: 308 RCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASN 367
C+N V+ + +P+ IS ++ +L N + S + +L + N
Sbjct: 40 SCSNQFSKVICVRKNLREVPDGIST-NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRN 98
Query: 368 LL----EGSLSWEISNAVALEKLDLSSNMLTRQIPKKI-GNLTNIQILKLNSNFFDGIIP 422
+ G+ + L L+L N LT IP L+ ++ L L +N + I
Sbjct: 99 HIRTIEIGAFN----GLANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPS 153
Query: 423 MEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT 482
F SL LDLG LS G+ L+NL LNL L
Sbjct: 154 YAFNRIPSLRRLDLG---------------ELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198
Query: 483 GSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSC 542
IP +K+ L L N L+ +I P SF L L L +
Sbjct: 199 -EIP-NLTPLIKLDELDLSGNHLS-AIR---------------PGSFQGLMHLQKLWMIQ 240
Query: 543 NELDGIVGLYVQSNKFYGEIPPE-LGNLVQLEYLDFSMNMLDGHIPEK-LCSLPYLLYLN 600
+++ I NL L ++ + N L +P L +L ++
Sbjct: 241 SQIQ--------------VIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIH 285
Query: 601 LADN 604
L N
Sbjct: 286 LHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 96.4 bits (240), Expect = 4e-21
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 16/238 (6%)
Query: 113 RLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGL 172
++L++ ENQ+ + L LE + L N + L +L+ N L
Sbjct: 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124
Query: 173 NGTIPSR-LGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVS-NNLLSGNIPPEI- 229
TIP+ L++L++L L +N + S+P + SL LD+ LS I
Sbjct: 125 T-TIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLS-YISEGAF 181
Query: 230 GNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLV 289
L L L L + L P + L + LS N LS P L
Sbjct: 182 EGLSNLRYLNLAMC--NLREI-----PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQ 234
Query: 290 EINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYI-SELP-LKVFDLQYNNF 345
++ + + + + FD +L E+ L +N ++ +P + + L L+ L +N +
Sbjct: 235 KLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 93.7 bits (233), Expect = 3e-20
Identities = 54/289 (18%), Positives = 91/289 (31%), Gaps = 74/289 (25%)
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323
+ ++L N++ + L + L N + F+ NL+ L L +NR
Sbjct: 66 TRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR-- 123
Query: 324 GSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVAL 383
++ +P F L
Sbjct: 124 ------LTTIPNGAF---------------------------------------VYLSKL 138
Query: 384 EKLDLSSNMLTRQIPKKI-GNLTNIQILKL-NSNFFDGIIPMEFGDCISLNTLDLGSNNL 441
++L L +N + IP + +++ L L I F +L L+L NL
Sbjct: 139 KELWLRNNPIES-IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 197
Query: 442 ------NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE-FGDSLK 494
+ + L L+ N LS PGS L +L L + + + I F +
Sbjct: 198 REIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQS 256
Query: 495 VQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCN 543
+ + L HN LT +P L F L+ L + L N
Sbjct: 257 LVEINLAHNNLT-LLPHDL---------------FTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 6e-20
Identities = 62/259 (23%), Positives = 97/259 (37%), Gaps = 50/259 (19%)
Query: 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL- 441
K+ L +P I TN ++L L+ N I F L L L N++
Sbjct: 45 FSKVICVRKNLRE-VPDGI--STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR 101
Query: 442 -------NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE-FGDSL 493
NG + L L +N L+ G+ L+ L L L N + SIP F
Sbjct: 102 TIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIP 160
Query: 494 KVQGLYLGH-NQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLY 552
++ L LG +L+ I +F L+ L +L+L+ L I
Sbjct: 161 SLRRLDLGELKRLS-YIS---------------EGAFEGLSNLRYLNLAMCNLREI---- 200
Query: 553 VQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEK-LCSLPYLLYLNLADNRLEGEVP 611
P L L++L+ LD S N L I L +L L + ++++ +
Sbjct: 201 -----------PNLTPLIKLDELDLSGNHLS-AIRPGSFQGLMHLQKLWMIQSQIQ-VIE 247
Query: 612 RSGIC--QNLSIISLTGNK 628
R+ Q+L I+L N
Sbjct: 248 RNAFDNLQSLVEINLAHNN 266
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 1e-19
Identities = 59/246 (23%), Positives = 93/246 (37%), Gaps = 40/246 (16%)
Query: 80 VSPFLF-NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQ-LGLLT 136
+ F +L L IL LS+N + + + L L L + +N+L+ +IP+ L+
Sbjct: 79 IKVNSFKHLRHLEILQLSRNHI-RTIEIGAFNGLANLNTLELFDNRLT-TIPNGAFVYLS 136
Query: 137 RLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQLQDLDLSDNL 195
+L+ + LR+N I L+ LD I L+ L+ L+L+
Sbjct: 137 KLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCN 196
Query: 196 LSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGPYQLSLFVGRI 254
L + L L L LD+S N LS I P L L L+
Sbjct: 197 LRE---IPNLTPLIKLDELDLSGNHLS-AIRPGSFQGLMHLQKLW--------------- 237
Query: 255 TPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSE 314
+ +++ N SLVEINL N L+ D+F +L
Sbjct: 238 --------------MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLER 283
Query: 315 LVLVNN 320
+ L +N
Sbjct: 284 IHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 88.7 bits (220), Expect = 1e-18
Identities = 63/299 (21%), Positives = 100/299 (33%), Gaps = 57/299 (19%)
Query: 185 QLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIG 243
Q + L +P + N + L++ N + I +L+ L L L
Sbjct: 44 QFSKVICVRKNLR-EVPDGISTNTR---LLNLHENQIQ-IIKVNSFKHLRHLEILQL--- 95
Query: 244 PYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE 303
S N + +L + L N L+
Sbjct: 96 --------------------------SRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPN 129
Query: 304 DVFDRCTNLSELVLVNNRISGSIPEYI-SELP-LKVFDLQYNNFTGVIPV-SLWNSENLM 360
F + L EL L NN I SIP Y + +P L+ DL I + NL
Sbjct: 130 GAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLR 188
Query: 361 EFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI 420
N A L + ++ + L++LDLS N L+ P L ++Q L + + I
Sbjct: 189 YLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVI 246
Query: 421 IPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGN 479
F + SL ++L NNL +L + L +L ++L N
Sbjct: 247 ERNAFDNLQSLVEINLAHNNL-------------TLLP---HDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 2e-17
Identities = 48/218 (22%), Positives = 80/218 (36%), Gaps = 41/218 (18%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQL-GLLTRLETISL 143
L++L L+L N L + L +LK L + N + SIPS + L + L
Sbjct: 110 GLANLNTLELFDNRL-TTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDL 167
Query: 144 -RSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPV 202
+ + L+ L+ + L IP+ L L +L +LDLS N LS ++
Sbjct: 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLS-AIRP 224
Query: 203 SLLKNLQSLSYLDVSNNLLSGNIPPE-IGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNC 261
+ L L L + + + I NL+ L ++
Sbjct: 225 GSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEIN---------------------- 261
Query: 262 SMLKYISLSNNKLSGPIPRELCNS-GSLVEINLDGNML 298
L++N L+ +P +L L I+L N
Sbjct: 262 -------LAHNNLTL-LPHDLFTPLHHLERIHLHHNPW 291
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 1e-24
Identities = 65/305 (21%), Positives = 104/305 (34%), Gaps = 63/305 (20%)
Query: 308 RCTN-LSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAAS 366
C+N S++V +S +P+ I + +L NN + + + +L
Sbjct: 51 SCSNQFSKVVCTRRGLS-EVPQGIPS-NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGR 108
Query: 367 NLL----EGSLSWEISNAVALEKLDLSSNMLTRQIPKKI-GNLTNIQILKLNSNFFDGII 421
N + G+ + +L L+L N LT IP L+ ++ L L +N + I
Sbjct: 109 NSIRQIEVGAFN----GLASLNTLELFDNWLTV-IPSGAFEYLSKLRELWLRNNPIESIP 163
Query: 422 PMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLL 481
F SL LDLG L G+ L NL LNL +
Sbjct: 164 SYAFNRVPSLMRLDLG---------------ELKKLEYISEGAFEGLFNLKYLNLGMCNI 208
Query: 482 TGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLS 541
+P + ++ L + N I P SF L+ L L +
Sbjct: 209 K-DMP-NLTPLVGLEELEMSGNHFP-EIR---------------PGSFHGLSSLKKLWVM 250
Query: 542 CNELDGIVGLYVQSNKFYGEIPPE-LGNLVQLEYLDFSMNMLDGHIPEKLC-SLPYLLYL 599
+++ I L L L+ + N L +P L L YL+ L
Sbjct: 251 NSQVS--------------LIERNAFDGLASLVELNLAHNNLS-SLPHDLFTPLRYLVEL 295
Query: 600 NLADN 604
+L N
Sbjct: 296 HLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 2e-24
Identities = 55/252 (21%), Positives = 94/252 (37%), Gaps = 19/252 (7%)
Query: 121 ENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR- 179
LS +P G+ + ++L N+ + L+ L N + I
Sbjct: 63 RRGLS-EVPQ--GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGA 118
Query: 180 LGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDL 238
L L L+L DN L+ +P + L L L + NN + +IP + L L
Sbjct: 119 FNGLASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRL 176
Query: 239 YLGIGPYQLSLFVGRITPEI-GNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNM 297
LG +L I+ LKY++L + +P L L E+ + GN
Sbjct: 177 DLGELK-KLE----YISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNH 229
Query: 298 LSGTIEDVFDRCTNLSELVLVNNRISGSIPEY-ISELP-LKVFDLQYNNFTGVIPVSLWN 355
F ++L +L ++N+++S I L L +L +NN + +
Sbjct: 230 FPEIRPGSFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288
Query: 356 SENLMEFNAASN 367
L+E + N
Sbjct: 289 LRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-22
Identities = 69/284 (24%), Positives = 98/284 (34%), Gaps = 54/284 (19%)
Query: 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL- 441
K+ + L+ +P+ I +N + L L N I F L L LG N++
Sbjct: 56 FSKVVCTRRGLSE-VPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR 112
Query: 442 -------NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE-FGDSL 493
NG + L L +N L+ G+ L+ L L L N + SIP F
Sbjct: 113 QIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVP 171
Query: 494 KVQGLYLGH-NQLTGSIP----------ESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSC 542
+ L LG +L I + L L + +P L GL L++S
Sbjct: 172 SLMRLDLGELKKLE-YISEGAFEGLFNLKYL-NLGMCNIK-DMPN-LTPLVGLEELEMSG 227
Query: 543 NELDGIVGLYVQSNKFYGEIPPE-LGNLVQLEYLDFSMNMLDGHIPEK-LCSLPYLLYLN 600
N EI P L L+ L + + I L L+ LN
Sbjct: 228 NHFP--------------EIRPGSFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELN 272
Query: 601 LADNRLEGEVPRS--GICQNLSIISLTGNKDLCEKIMGSDCQIL 642
LA N L +P + L + L N C DC IL
Sbjct: 273 LAHNNLS-SLPHDLFTPLRYLVELHLHHNPWNC------DCDIL 309
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 98.7 bits (246), Expect = 8e-22
Identities = 60/324 (18%), Positives = 102/324 (31%), Gaps = 83/324 (25%)
Query: 161 QLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNL 220
Q + + GL+ +P + + + L+L +N + + ++L L L + N
Sbjct: 55 QFSKVVCTRRGLS-EVPQGI--PSNTRYLNLMENNIQ-MIQADTFRHLHHLEVLQLGRNS 110
Query: 221 LSGNIPPEI-GNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIP 279
+ I L L+ L L +N L+ IP
Sbjct: 111 IR-QIEVGAFNGLASLNTLEL-----------------------------FDNWLTV-IP 139
Query: 280 RE-LCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN-NRISGSIPEYI-SELP-L 335
L E+ L N + F+R +L L L ++ I E L L
Sbjct: 140 SGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLE-YISEGAFEGLFNL 198
Query: 336 KVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTR 395
K +L N + ++ V LE+L++S N
Sbjct: 199 KYLNLGMCNIKDM--------------------------PNLTPLVGLEELEMSGNHFPE 232
Query: 396 QIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNN 455
P L++++ L + ++ I F SL L+L NNL +
Sbjct: 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNL-------------S 279
Query: 456 MLSGKIPGSLSRLTNLTTLNLFGN 479
L + L L L+L N
Sbjct: 280 SLP---HDLFTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 3e-21
Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 40/263 (15%)
Query: 88 SSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQ-LGLLTRLETISLRS 145
S+ R L+L +N + + +L L++L +G N + I L L T+ L
Sbjct: 75 SNTRYLNLMENNI-QMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLASLNTLELFD 132
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQLQDLDLSDNLLSGSLPVSL 204
N T + +L+ L N + +IPS + L LDL + +
Sbjct: 133 NWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISEGA 191
Query: 205 LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSML 264
+ L +L YL++ + ++ P + L L +L
Sbjct: 192 FEGLFNLKYLNLGMCNIK-DM-PNLTPLVGLEELE------------------------- 224
Query: 265 KYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISG 324
+S N P SL ++ + + +S + FD +L EL L +N +S
Sbjct: 225 ----MSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS- 279
Query: 325 SIPEYI-SELP-LKVFDLQYNNF 345
S+P + + L L L +N +
Sbjct: 280 SLPHDLFTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 2e-20
Identities = 55/258 (21%), Positives = 96/258 (37%), Gaps = 23/258 (8%)
Query: 262 SMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNR 321
+ + + LS +P+ + + +NL N + D F +L L L N
Sbjct: 54 NQFSKVVCTRRGLSE-VPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNS 110
Query: 322 ISGSIPEYI-SELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEI-S 378
I I + L L +L N T + + L E +N +E S+ +
Sbjct: 111 IR-QIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFN 168
Query: 379 NAVALEKLDLSS-NMLTRQIPKKI-GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDL 436
+L +LDL L I + L N++ L L + + L L++
Sbjct: 169 RVPSLMRLDLGELKKLEY-ISEGAFEGLFNLKYLNLGMCNIKDM--PNLTPLVGLEELEM 225
Query: 437 GSNNL--------NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE 488
N+ +G + L + N+ +S + L +L LNL N L+ S+P +
Sbjct: 226 SGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS-SLPHD 284
Query: 489 FGDSLK-VQGLYLGHNQL 505
L+ + L+L HN
Sbjct: 285 LFTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 5e-20
Identities = 57/246 (23%), Positives = 86/246 (34%), Gaps = 40/246 (16%)
Query: 80 VSPFLF-NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQ-LGLLT 136
+ F +L L +L L +N + Q+ + L L L + +N L+ IPS L+
Sbjct: 90 IQADTFRHLHHLEVLQLGRNSI-RQIEVGAFNGLASLNTLELFDNWLT-VIPSGAFEYLS 147
Query: 137 RLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQLQDLDLSDNL 195
+L + LR+N + L LD I L L+ L+L
Sbjct: 148 KLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCN 207
Query: 196 LSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE-IGNLKKLSDLYLGIGPYQLSLFVGRI 254
+ + L L L L++S N I P L L L+
Sbjct: 208 IKD---MPNLTPLVGLEELEMSGNHFP-EIRPGSFHGLSSLKKLW--------------- 248
Query: 255 TPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSE 314
+ N+++S SLVE+NL N LS D+F L E
Sbjct: 249 --------------VMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVE 294
Query: 315 LVLVNN 320
L L +N
Sbjct: 295 LHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 86.0 bits (213), Expect = 1e-17
Identities = 48/217 (22%), Positives = 78/217 (35%), Gaps = 39/217 (17%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQ-LGLLTRLETISL 143
L+SL L+L N L + L +L+ L + N + SIPS + L + L
Sbjct: 121 GLASLNTLELFDNWL-TVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDL 178
Query: 144 -RSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPV 202
+ LK L+ + +P+ L L L++L++S N +
Sbjct: 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMPN-LTPLVGLEELEMSGNHFP-EIRP 235
Query: 203 SLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCS 262
L SL L V N+ +S I L +
Sbjct: 236 GSFHGLSSLKKLWVMNSQVS-LIERNA-----FDGL-----------------------A 266
Query: 263 MLKYISLSNNKLSGPIPRELCNS-GSLVEINLDGNML 298
L ++L++N LS +P +L LVE++L N
Sbjct: 267 SLVELNLAHNNLSS-LPHDLFTPLRYLVELHLHHNPW 302
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 3e-24
Identities = 61/238 (25%), Positives = 90/238 (37%), Gaps = 13/238 (5%)
Query: 114 LKMLSVGENQLSGSIPSQLGLLTRLETISLRSN--SFTGEMPSELGDIKQLKSLDFSGNG 171
L + N+L LT+L +SL SN SF G LK LD S NG
Sbjct: 30 ATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNG 89
Query: 172 LNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-G 230
+ T+ S L QL+ LD + L S+ +L++L YLD+S+ I
Sbjct: 90 VI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR-VAFNGIFN 147
Query: 231 NLKKLSDLYLGIGPYQLSLFVGRITPEI-GNCSMLKYISLSNNKLSGPIPRELCNSGSLV 289
L L L + + F P+I L ++ LS +L P + SL
Sbjct: 148 GLSSLEVLKM-----AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 202
Query: 290 EINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP--LKVFDLQYNNF 345
+N+ N + +L L N I S + + P L +L N+F
Sbjct: 203 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 9e-24
Identities = 59/285 (20%), Positives = 97/285 (34%), Gaps = 53/285 (18%)
Query: 386 LDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN--- 442
+ +S LT +P I ++ L+L SN + F L L L SN L+
Sbjct: 12 IRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68
Query: 443 -------GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE--FGDSL 493
G + YL L+ N + + + L L L+ + L + F
Sbjct: 69 CCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLR 126
Query: 494 KVQGLYLGHNQLTGSIPE-------SLG--YLSGNKLYGSV-PTSFGNLNGLTHLDLSCN 543
+ L + H SL ++GN + P F L LT LDLS
Sbjct: 127 NLIYLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 185
Query: 544 ELDGIVGLYVQSNKFYGEIPPE-LGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLA 602
+L+ ++ P +L L+ L+ S N L L L+ +
Sbjct: 186 QLE--------------QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYS 231
Query: 603 DNRLEGEVPRS---GICQNLSIISLTGNKDLCEKIMGSDCQILTF 644
N + + +L+ ++LT N C C+ +F
Sbjct: 232 LNHIM-TSKKQELQHFPSSLAFLNLTQNDFAC------TCEHQSF 269
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 3e-22
Identities = 46/221 (20%), Positives = 82/221 (37%), Gaps = 16/221 (7%)
Query: 86 NLSSLRILDLSKNLL-FGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISL 143
L+ L L LS N L F Q LK L + N + ++ S L +LE +
Sbjct: 50 KLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDF 108
Query: 144 RSNSFTGEMPSE--LGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201
+ ++ +M ++ L LD S L+ L+ L ++ N +
Sbjct: 109 QHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL 167
Query: 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGPYQLSLFVGRITPEI-G 259
+ L++L++LD+S L + P +L L L + +
Sbjct: 168 PDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHN--NFF----SLDTFPYK 220
Query: 260 NCSMLKYISLSNNKLSGPIPRELCN-SGSLVEINLDGNMLS 299
+ L+ + S N + +EL + SL +NL N +
Sbjct: 221 CLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 6e-21
Identities = 57/296 (19%), Positives = 99/296 (33%), Gaps = 65/296 (21%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLN--GTIPSRLGDLT 184
S+P+ G+ + + L SN + QL L S NGL+ G T
Sbjct: 21 SVPT--GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTT 78
Query: 185 QLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGP 244
L+ LDLS N + ++ S L+ L +LD ++ L +
Sbjct: 79 SLKYLDLSFNGVI-TMS-SNFLGLEQLEHLDFQHSNLK-QMSEF---------------- 119
Query: 245 YQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGN-MLSGTIE 303
S+F+ L Y+ +S+ SL + + GN +
Sbjct: 120 ---SVFLS--------LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 168
Query: 304 DVFDRCTNLSELVLVNNRISGSIPEYI-SELP-LKVFDLQYNNFTGVIPVSLWNSENLME 361
D+F NL+ L L ++ + + L L+V ++ +NNF +
Sbjct: 169 DIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK------- 220
Query: 362 FNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI--GNLTNIQILKLNSN 415
+L+ LD S N + K+ +++ L L N
Sbjct: 221 -----------------CLNSLQVLDYSLNHIMT-SKKQELQHFPSSLAFLNLTQN 258
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 9e-18
Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 9/167 (5%)
Query: 79 PVSPFLF-NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQ--LGLL 135
+SL+ LDLS N + +S L++L+ L + L + L
Sbjct: 68 GCCSQSDFGTTSLKYLDLSFNGV-ITMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSL 125
Query: 136 TRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQLQDLDLSDN 194
L + + + L+ L +GN +L L LDLS
Sbjct: 126 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 185
Query: 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYL 240
L L + +L SL L++S+N ++ L L L
Sbjct: 186 QLE-QLSPTAFNSLSSLQVLNMSHNNFF-SLDTFPYKCLNSLQVLDY 230
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 6e-06
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 83 FLFNLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
L +L LDLS+ L QLSP ++L L++L++ N L L+ +
Sbjct: 170 IFTELRNLTFLDLSQCQL-EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228
Query: 142 SLRSNSFTGEMPSELGDI-KQLKSLDFSGN 170
N EL L L+ + N
Sbjct: 229 DYSLNHIMTSKKQELQHFPSSLAFLNLTQN 258
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 49/217 (22%), Positives = 79/217 (36%), Gaps = 30/217 (13%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAA-EMETLDMVKHQNLVQLLGY 725
+G GGF F+ D A+K++ + RE E++ L ++H +V+
Sbjct: 12 CLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA 71
Query: 726 ---------CSVGEEKLLVY---EYMVNGSLDDWL--RNRAASLDWGKRCKIAYGAARGI 771
K+ +Y + +L DW+ R + I A +
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131
Query: 772 SFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG---- 827
FLH ++H D+K SNI KV DFGL + E + T
Sbjct: 132 EFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 828 -------YVPSEYGQAGRANERGDIYSFGVILLELVT 857
Y+ E + + DI+S G+IL EL+
Sbjct: 189 GQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 34/223 (15%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLL 723
V+G G F K D + A+KK+ + +E+ L + HQ +V+
Sbjct: 10 EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVMLLASLNHQYVVRYY 68
Query: 724 G----------YCSVGEEKLLVY---EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARG 770
+ ++K ++ EY NG+L D + + + + ++
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 771 ISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG-- 827
+S++H G IIH D+K NI +++ K+ DFGLA+ + + D+ + G
Sbjct: 129 LSYIHSQG----IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 828 -----------YVPSE-YGQAGRANERGDIYSFGVILLELVTG 858
YV +E G NE+ D+YS G+I E++
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 24/212 (11%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTVAVK--KLSQATGQCDREFAAEMETLDMVKHQNL--VQL 722
IG GG F+ ++ A+K L +A Q + E+ L+ ++ + ++L
Sbjct: 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPY 781
Y + +V E N L+ WL+ + S+D +R + +H HG
Sbjct: 94 YDYEITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG---- 147
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA------------DTIGYV 829
I+H D+K +N L+ D K+ DFG+A + + V D+ +
Sbjct: 148 IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 830 PSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
+ + + D++S G IL + GK P
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 5e-23
Identities = 51/247 (20%), Positives = 93/247 (37%), Gaps = 46/247 (18%)
Query: 654 VGSVLVIAIIVFE--NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFA-AEME 709
G +++I + +G GGF + D A+K++ Q DRE A E +
Sbjct: 20 QGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI-LCHEQQDREEAQREAD 78
Query: 710 TLDMVKHQNLVQLLGYCSV----GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKR----- 760
+ H N+++L+ YC E L+ + G+L + + D G
Sbjct: 79 MHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERL---KDKGNFLTEDQ 135
Query: 761 -CKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819
+ G RG+ +H H D+K +NILL D + + D G ++ +
Sbjct: 136 ILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMN-----QACIH 187
Query: 820 TDTADTIGYVPSEYGQAG----RA------------NERGDIYSFGVILLELVTGKQPTG 863
+ + + Q RA +ER D++S G +L ++ G+ P
Sbjct: 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP-- 245
Query: 864 PEFEDKD 870
++
Sbjct: 246 --YDMVF 250
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 9e-23
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 24/212 (11%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTVAVK--KLSQATGQCDREFAAEMETLDMVKHQNL--VQL 722
IG GG F+ ++ A+K L +A Q + E+ L+ ++ + ++L
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPY 781
Y + +V E N L+ WL+ + S+D +R + +H HG
Sbjct: 122 YDYEITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG---- 175
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA------------DTIGYV 829
I+H D+K +N L+ D K+ DFG+A + + V D+ +
Sbjct: 176 IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSS 234
Query: 830 PSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
+ + + D++S G IL + GK P
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 1e-22
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 33/216 (15%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGY 725
+IG GGF FK D KT +K++ + +RE ++ L + H N+V G
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVHYNGC 72
Query: 726 -------------CSVGEEKLLVY---EYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAA 768
S + ++ E+ G+L+ W+ R LD ++
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 769 RGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG- 827
+G+ ++H +I+ D+K SNI L D + K+ DFGL + + + G
Sbjct: 133 KGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN-----DGKRTRSKGT 184
Query: 828 --YVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
Y+ E + + D+Y+ G+IL EL+
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT 220
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 1e-22
Identities = 50/226 (22%), Positives = 78/226 (34%), Gaps = 20/226 (8%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQ 185
++P G+ + I L N + + + L L N L I + L
Sbjct: 25 AVPV--GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVL-ARIDAAAFTGLAL 81
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLG--- 241
L+ LDLSDN S+ + L L L + L + P + L L LYL
Sbjct: 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNA 140
Query: 242 IGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGT 301
+ F L ++ L N++S R SL + L N ++
Sbjct: 141 LQALPDDTFRD--------LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192
Query: 302 IEDVFDRCTNLSELVLVNNRISGSIPEYI-SELP-LKVFDLQYNNF 345
F L L L N +S ++P + L L+ L N +
Sbjct: 193 HPHAFRDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 5e-21
Identities = 59/235 (25%), Positives = 86/235 (36%), Gaps = 42/235 (17%)
Query: 381 VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNN 440
A +++ L N ++ N+ IL L+SN I F L LDL N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 441 ---------LNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE-FG 490
+G + L L+ L PG L L L L N L ++P + F
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFR 150
Query: 491 DSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVG 550
D + L+L N+++ S+PE +F L+ L L L N +
Sbjct: 151 DLGNLTHLFLHGNRIS-SVPER---------------AFRGLHSLDRLLLHQNRVA---- 190
Query: 551 LYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEK-LCSLPYLLYLNLADN 604
+V + F L +L L N L +P + L L L YL L DN
Sbjct: 191 -HVHPHAFRD--------LGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 4e-19
Identities = 60/267 (22%), Positives = 87/267 (32%), Gaps = 61/267 (22%)
Query: 325 SIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLL----EGSLSWEISNA 380
++P I + L N + V S NL SN+L + +
Sbjct: 25 AVPVGIPAA-SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAF----TGL 79
Query: 381 VALEKLDLSSNMLTRQIPKKI-GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439
LE+LDLS N R + L + L L+ + P F +L L L N
Sbjct: 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN 139
Query: 440 NLNGCVVVVYLLLNNNMLSGKIP-GSLSRLTNLTTLNLFGNLLTGSIPPE-FGDSLKVQG 497
L +P + L NLT L L GN ++ S+P F +
Sbjct: 140 ALQ-----------------ALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDR 181
Query: 498 LYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNK 557
L L N++ + P +F +L L L L N L
Sbjct: 182 LLLHQNRVA-HVH---------------PHAFRDLGRLMTLYLFANNLS----------- 214
Query: 558 FYGEIPPE-LGNLVQLEYLDFSMNMLD 583
+P E L L L+YL + N
Sbjct: 215 ---ALPTEALAPLRALQYLRLNDNPWV 238
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 5e-19
Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 8/161 (4%)
Query: 84 LFNLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQ-LGLLTRLETI 141
L+ L LDLS N + P L RL L + L + L L+ +
Sbjct: 76 FTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYL 134
Query: 142 SLRSNSFTGEMPSE-LGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSL 200
L+ N+ +P + D+ L L GN ++ L L L L N ++ +
Sbjct: 135 YLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA-HV 192
Query: 201 PVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYL 240
++L L L + N LS +P E L+ L L L
Sbjct: 193 HPHAFRDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRL 232
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 1e-16
Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 8/159 (5%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQ-LGLLTRLETISL 143
+L IL L N+L ++ + L L+ L + +N S+ L RL T+ L
Sbjct: 54 ACRNLTILWLHSNVL-ARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112
Query: 144 RSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQLQDLDLSDNLLSGSLPV 202
P + L+ L N L +P DL L L L N +S S+P
Sbjct: 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRIS-SVPE 170
Query: 203 SLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYL 240
+ L SL L + N ++ ++ P +L +L LYL
Sbjct: 171 RAFRGLHSLDRLLLHQNRVA-HVHPHAFRDLGRLMTLYL 208
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 1e-22
Identities = 46/299 (15%), Positives = 96/299 (32%), Gaps = 27/299 (9%)
Query: 162 LKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLL 221
+ + P + +L ++ L S+ + +N+ +
Sbjct: 1 MGETITVSTPIKQIFP--DDAFAETIKDNLKKKSVTD---AVTQNELNSIDQIIANNSDI 55
Query: 222 SGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRE 281
++ I L ++ L+L + I P + N L ++ L NK+
Sbjct: 56 K-SVQG-IQYLPNVTKLFLN------GNKLTDIKP-LTNLKNLGWLFLDENKIKDLSS-- 104
Query: 282 LCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDL 340
L + L ++L+ N +S I L L L NN+I + +S L L L
Sbjct: 105 LKDLKKLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNKI--TDITVLSRLTKLDTLSL 160
Query: 341 QYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKK 400
+ N + ++P++ L + N + L ++ L+ L+L S +
Sbjct: 161 EDNQISDIVPLA--GLTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELFSQECLNKPINH 216
Query: 401 IGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSG 459
NL +K + D ++ + V ++ +
Sbjct: 217 QSNLVVPNTVKNTDGSLVTPEIIS--DDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGK 273
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 99.4 bits (247), Expect = 1e-21
Identities = 52/284 (18%), Positives = 99/284 (34%), Gaps = 25/284 (8%)
Query: 135 LTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194
+L+ S T ++ + + + + + ++ + L + L L+ N
Sbjct: 20 FAETIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGN 75
Query: 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRI 254
L+ + L NL++L +L + N + ++ + +LKKL L L + I
Sbjct: 76 KLTD---IKPLTNLKNLGWLFLDENKIK-DLSS-LKDLKKLKSLSLE------HNGISDI 124
Query: 255 TPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSE 314
+ + L+ + L NNK++ L L ++L+ N +S I T L
Sbjct: 125 NG-LVHLPQLESLYLGNNKITDITV--LSRLTKLDTLSLEDNQIS-DIVP-LAGLTKLQN 179
Query: 315 LVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSL 373
L L N IS + ++ L L V +L N L
Sbjct: 180 LYLSKNHIS-DL-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVT-- 235
Query: 374 SWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFF 417
IS+ EK ++ ++ + I K + F
Sbjct: 236 PEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFH 279
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 93.2 bits (231), Expect = 9e-20
Identities = 53/282 (18%), Positives = 103/282 (36%), Gaps = 29/282 (10%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
+ +L K + Q + L + + + + S+ + L + + L
Sbjct: 19 AFAETIKDNLKKKSV-TDAVTQ-NELNSIDQIIANNSDIK-SV-QGIQYLPNVTKLFLNG 74
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205
N T P L ++K L L N + + S L DL +L+ L L N +S ++ L
Sbjct: 75 NKLTDIKP--LTNLKNLGWLFLDENKIK-DLSS-LKDLKKLKSLSLEHNGISD---INGL 127
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT--PEIGNCSM 263
+L L L + NN ++ +I + L KL L L +I+ + +
Sbjct: 128 VHLPQLESLYLGNNKIT-DITV-LSRLTKLDTLSLE---------DNQISDIVPLAGLTK 176
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323
L+ + LS N +S R L +L + L + + + + +
Sbjct: 177 LQNLYLSKNHIS--DLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL- 233
Query: 324 GSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNA 364
PE IS+ + +++++ VS + + A
Sbjct: 234 -VTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKA 274
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 90.2 bits (223), Expect = 8e-19
Identities = 57/274 (20%), Positives = 98/274 (35%), Gaps = 29/274 (10%)
Query: 312 LSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLE 370
+ E + V+ I P +L+ + T + + ++ + A ++ ++
Sbjct: 1 MGETITVSTPIKQIFP--DDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIK 56
Query: 371 GSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCIS 430
S+ I + KL L+ N LT P + NL N+ L L+ N + ++ D
Sbjct: 57 -SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLSSLK--DLKK 110
Query: 431 LNTLDLGSN------NLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS 484
L +L L N L + L L NN ++ I LSRLT L TL+L N ++
Sbjct: 111 LKSLSLEHNGISDINGLVHLPQLESLYLGNNKIT-DITV-LSRLTKLDTLSLEDNQIS-D 167
Query: 485 IPPEFGDSLKVQGLYLGHNQLTGSIPESLG-------YLSGNKLYGSVPTSFGNLNGLTH 537
I P K+Q LYL N ++ + G L + NL
Sbjct: 168 IVP-LAGLTKLQNLYLSKNHIS-DLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNT 225
Query: 538 LDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQ 571
+ + L + + + L
Sbjct: 226 VKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTN 259
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 89.4 bits (221), Expect = 2e-18
Identities = 53/292 (18%), Positives = 107/292 (36%), Gaps = 25/292 (8%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
L+S+ + + + + + + L + L + N+L+ I L L L +
Sbjct: 37 VTQNELNSIDQIIANNSDI-KSVQG-IQYLPNVTKLFLNGNKLT-DI-KPLTNLKNLGWL 92
Query: 142 SLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201
L N S L D+K+LKSL NG++ I L L QL+ L L +N ++
Sbjct: 93 FLDENKIK--DLSSLKDLKKLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNKITD--- 145
Query: 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT--PEIG 259
+++L L L L + +N +S +I P + L KL +LYL I+ +
Sbjct: 146 ITVLSRLTKLDTLSLEDNQIS-DIVP-LAGLTKLQNLYLS---------KNHISDLRALA 194
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEI-NLDGNMLSGTIEDVFDRCTNLSELVLV 318
L + L + + N + N DG++++ I + +
Sbjct: 195 GLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHL 254
Query: 319 NNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLE 370
+ + + + +++ ++ ++ +E
Sbjct: 255 PEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLKEVYTVSYDVDGTVIKTKVE 306
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 77.8 bits (191), Expect = 7e-15
Identities = 45/254 (17%), Positives = 83/254 (32%), Gaps = 54/254 (21%)
Query: 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN 442
+ + S + + P L + + S++ + ++++
Sbjct: 1 MGETITVSTPIKQIFP--DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK 56
Query: 443 GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGH 502
+ G + L N+T L L GN LT I P + + L+L
Sbjct: 57 -----------------SVQG-IQYLPNVTKLFLNGNKLT-DIKP-LTNLKNLGWLFLDE 96
Query: 503 NQLTGSIP--------ESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQ 554
N++ + +SL L N + S +L L L L N++ I L
Sbjct: 97 NKIK-DLSSLKDLKKLKSL-SLEHNGI--SDINGLVHLPQLESLYLGNNKITDITVL--- 149
Query: 555 SNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSG 614
L +L+ L N + I L L L L L+ N + ++
Sbjct: 150 ------------SRLTKLDTLSLEDNQIS-DIVP-LAGLTKLQNLYLSKNHIS-DLRALA 194
Query: 615 ICQNLSIISLTGNK 628
+NL ++ L +
Sbjct: 195 GLKNLDVLELFSQE 208
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 99.0 bits (247), Expect = 1e-22
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 24/212 (11%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTVAVK--KLSQATGQCDREFAAEMETLDMVKHQNL--VQL 722
IG GG F+ ++ A+K L +A Q + E+ L+ ++ + ++L
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPY 781
Y + +V E N L+ WL+ + S+D +R + +H HG
Sbjct: 75 YDYEITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG---- 128
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA------------DTIGYV 829
I+H D+K +N L+ D K+ DFG+A + + V D+ +
Sbjct: 129 IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 187
Query: 830 PSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
+ + + D++S G IL + GK P
Sbjct: 188 RENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 97.5 bits (243), Expect = 3e-22
Identities = 60/287 (20%), Positives = 119/287 (41%), Gaps = 29/287 (10%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
L++ + K+ + Q ++L + LS ++ +I + L L + L+
Sbjct: 17 ALANAIKIAAGKSNV-TDTVTQ-ADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKD 72
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205
N T + L ++ ++ L+ SGN L S + L ++ LDL+ ++ V+ L
Sbjct: 73 NQIT--DLAPLKNLTKITELELSGNPL--KNVSAIAGLQSIKTLDLTSTQITD---VTPL 125
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT--PEIGNCSM 263
L +L L + N ++ NI P + L L L +G +++ + N S
Sbjct: 126 AGLSNLQVLYLDLNQIT-NISP-LAGLTNLQYLSIGN---------AQVSDLTPLANLSK 174
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323
L + +NK+S P L + +L+E++L N +S +NL + L N I+
Sbjct: 175 LTTLKADDNKISDISP--LASLPNLIEVHLKNNQISD--VSPLANTSNLFIVTLTNQTIT 230
Query: 324 GSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLE 370
Y + L + ++ + + P ++ ++ N NL
Sbjct: 231 NQPVFYNNNLVVPN-VVKGPSGAPIAPATISDNGTYASPNLTWNLTS 276
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 8e-22
Identities = 68/300 (22%), Positives = 123/300 (41%), Gaps = 36/300 (12%)
Query: 109 SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168
L ++ G++ ++ ++ L + T+S T + + L L+
Sbjct: 16 PALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT--TIEGVQYLNNLIGLELK 71
Query: 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE 228
N + T + L +LT++ +L+LS N L VS + LQS+ LD+++ ++ ++ P
Sbjct: 72 DNQI--TDLAPLKNLTKITELELSGNPLKN---VSAIAGLQSIKTLDLTSTQIT-DVTP- 124
Query: 229 IGNLKKLSDLYLGIGPYQLSLFVGRIT--PEIGNCSMLKYISLSNNKLSGPIPRELCNSG 286
+ L L LYL + +IT + + L+Y+S+ N ++S P L N
Sbjct: 125 LAGLSNLQVLYLD---------LNQITNISPLAGLTNLQYLSIGNAQVSDLTP--LANLS 173
Query: 287 SLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNF 345
L + D N +S I NL E+ L NN+IS P ++ L + L
Sbjct: 174 KLTTLKADDNKIS-DISP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTI 229
Query: 346 TGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLT 405
T N N+++G I+ A + +S LT + I N++
Sbjct: 230 TNQPVFYNNNLVVP-------NVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVS 282
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 1e-21
Identities = 68/333 (20%), Positives = 126/333 (37%), Gaps = 52/333 (15%)
Query: 135 LTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194
L I+ ++ T D+ + +L G G+ TI + L L L+L DN
Sbjct: 18 LANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKDN 73
Query: 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRI 254
++ ++ LKNL ++ L++S N L N+ I L+ + L
Sbjct: 74 QITD---LAPLKNLTKITELELSGNPLK-NVSA-IAGLQSIKTLD--------------- 113
Query: 255 TPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSE 314
L++ +++ P L +L + LD N ++ TNL
Sbjct: 114 --------------LTSTQITDVTP--LAGLSNLQVLYLDLNQITNI--SPLAGLTNLQY 155
Query: 315 LVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSL 373
L + N ++S P ++ L L N + + P++ + NL+E + +N + +
Sbjct: 156 LSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISPLA--SLPNLIEVHLKNNQIS-DV 210
Query: 374 SWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNT 433
S ++N L + L++ +T Q NL ++K S I P D + +
Sbjct: 211 S-PLANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAP--IAPATISDNGTYAS 267
Query: 434 LDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLS 466
+L N + V Y N ++ S
Sbjct: 268 PNLTWNLTSFINNVSY-TFNQSVTFKNTTVPFS 299
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 9e-21
Identities = 47/312 (15%), Positives = 111/312 (35%), Gaps = 30/312 (9%)
Query: 180 LGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLY 239
L + + ++ +L ++ L ++ I + L L L
Sbjct: 15 DPALANAIKIAAGKSNVTD---TVTQADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLE 69
Query: 240 LGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLS 299
L Q++ + P + N + + + LS N L + S+ ++L ++
Sbjct: 70 LKDN--QIT----DLAP-LKNLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQIT 120
Query: 300 GTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSEN 358
+ +NL L L N+I+ +I ++ L L+ + + + P L N
Sbjct: 121 -DVTP-LAGLSNLQVLYLDLNQIT-NISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSK 174
Query: 359 LMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFD 418
L A N + +S +++ L ++ L +N ++ P + N +N+ I+ L +
Sbjct: 175 LTTLKADDNKIS-DIS-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230
Query: 419 GIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLS-GKIPGSLSRLTNLTTLNLF 477
+ + N + +G + + +N + + +L+ N +
Sbjct: 231 NQPVFYNNNLVVPNVV----KGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFN 286
Query: 478 GNLLTGSIPPEF 489
++ + F
Sbjct: 287 QSVTFKNTTVPF 298
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 2e-20
Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 30/254 (11%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
+L + L + + V L L L + +NQ++ + L LT++ +
Sbjct: 35 VTQADLDGITTLSAFGTGV-TTIEG-VQYLNNLIGLELKDNQIT-DLAP-LKNLTKITEL 90
Query: 142 SLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201
L N S + ++ +K+LD + + P L L+ LQ L L N ++
Sbjct: 91 ELSGNPLK--NVSAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITN--- 143
Query: 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT--PEIG 259
+S L L +L YL + N +S ++ P + NL KL+ L +I+ +
Sbjct: 144 ISPLAGLTNLQYLSIGNAQVS-DLTP-LANLSKLTTLKADD---------NKISDISPLA 192
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319
+ L + L NN++S P L N+ +L + L ++ NL +V
Sbjct: 193 SLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT---NQPVFYNNNLVVPNVVK 247
Query: 320 NRISGSI-PEYISE 332
I P IS+
Sbjct: 248 GPSGAPIAPATISD 261
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 2e-17
Identities = 47/309 (15%), Positives = 92/309 (29%), Gaps = 66/309 (21%)
Query: 301 TIEDVF--DRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSE 357
I +F N ++ + ++ ++ ++L + T + V
Sbjct: 8 AINVIFPDPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTIEGVQ--YLN 63
Query: 358 NLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFF 417
NL+ N + L+ + N + +L+LS N L I L +I+ L L S
Sbjct: 64 NLIGLELKDNQIT-DLA-PLKNLTKITELELSGNPLKN--VSAIAGLQSIKTLDLTSTQI 119
Query: 418 DGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLF 477
+ P +L L L N + I L+ LTNL L++
Sbjct: 120 TDVTP--LAGLSNLQVLYLDLNQIT-----------------NISP-LAGLTNLQYLSIG 159
Query: 478 GNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTH 537
++ + P + K+ L N+++ I +L L
Sbjct: 160 NAQVS-DLTP-LANLSKLTTLKADDNKIS-DIS-----------------PLASLPNLIE 199
Query: 538 LDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLL 597
+ L N++ + L N L + + + +L
Sbjct: 200 VHLKNNQISDV---------------SPLANTSNLFIVTLTNQTITNQPVFYNNNLVVPN 244
Query: 598 YLNLADNRL 606
+
Sbjct: 245 VVKGPSGAP 253
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 1e-11
Identities = 45/235 (19%), Positives = 74/235 (31%), Gaps = 54/235 (22%)
Query: 403 NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP 462
L N + + + D + TL + I
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-----------------TIE 57
Query: 463 GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLY 522
G + L NL L L N +T + P + K+ L L N L ++
Sbjct: 58 G-VQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLK-NVS------------ 101
Query: 523 GSVPTSFGNLNGLTHLDLSCNELDGIVG---------LYVQSNKFYGEIPPELGNLVQLE 573
+ L + LDL+ ++ + LY+ N+ I P L L L+
Sbjct: 102 -----AIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQI-TNISP-LAGLTNLQ 154
Query: 574 YLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNK 628
YL + P L +L L L DN++ ++ NL + L N+
Sbjct: 155 YLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS-DISPLASLPNLIEVHLKNNQ 206
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 4e-22
Identities = 54/235 (22%), Positives = 80/235 (34%), Gaps = 44/235 (18%)
Query: 378 SNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLG 437
S + +++ LT +P + + IL L+ N L L+L
Sbjct: 7 SKVASHLEVNCDKRNLTA-LPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLD 63
Query: 438 SNNL------NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGD 491
L V+ L L++N L +P L LT L++ N LT S+P
Sbjct: 64 RAELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALR 121
Query: 492 SL-KVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVG 550
L ++Q LYL N+L ++P L L L L+ N L
Sbjct: 122 GLGELQELYLKGNELK-TLPPGL---------------LTPTPKLEKLSLANNNLT---- 161
Query: 551 LYVQSNKFYGEIPPEL-GNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADN 604
E+P L L L+ L N L IP+ L + L N
Sbjct: 162 ----------ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 4e-17
Identities = 44/163 (26%), Positives = 65/163 (39%), Gaps = 10/163 (6%)
Query: 81 SPFLF-NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLE 139
S + L L+L + L L L L + NQL S+P L L
Sbjct: 47 SLATLMPYTRLTQLNLDRAEL--TKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALT 103
Query: 140 TISLRSNSFTGEMPSELGD-IKQLKSLDFSGNGLNGTIPSRLGD-LTQLQDLDLSDNLLS 197
+ + N T +P + +L+ L GN L T+P L +L+ L L++N L+
Sbjct: 104 VLDVSFNRLT-SLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLT 161
Query: 198 GSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL 240
LP LL L++L L + N L IP L +L
Sbjct: 162 -ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFL 202
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 80.2 bits (198), Expect = 1e-16
Identities = 50/241 (20%), Positives = 75/241 (31%), Gaps = 44/241 (18%)
Query: 306 FDRCTNLSELVLVNNRISGSIPEYISELP--LKVFDLQYNNFTGVIPVSLWNSENLMEFN 363
+ + E+ ++ ++P +LP + L N +L L + N
Sbjct: 6 VSKVASHLEVNCDKRNLT-ALP---PDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 364 AASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPM 423
L L L LDLS N L +P L + +L ++ N +
Sbjct: 62 LDRAELT-KLQ-VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLG 118
Query: 424 EFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTG 483
L L L N L L PG L+ L L+L N LT
Sbjct: 119 ALRGLGELQELYLKGNELK-------------TLP---PGLLTPTPKLEKLSLANNNLT- 161
Query: 484 SIPPEFGDSL-KVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSC 542
+P + L + L L N L +IP+ FG+ L L
Sbjct: 162 ELPAGLLNGLENLDTLLLQENSLY-TIPKGF---------------FGSHL-LPFAFLHG 204
Query: 543 N 543
N
Sbjct: 205 N 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 8e-15
Identities = 49/184 (26%), Positives = 64/184 (34%), Gaps = 41/184 (22%)
Query: 430 SLNTLDLGSNNLNGC-----VVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS 484
S ++ NL L L+ N+L +L T LT LNL LT
Sbjct: 11 SHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-K 69
Query: 485 IPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNE 544
+ G + L L HNQL S+P L LT LD+S N
Sbjct: 70 LQV-DGTLPVLGTLDLSHNQLQ-----------------SLPLLGQTLPALTVLDVSFNR 111
Query: 545 LDGIVGLYVQSNKFYGEIPPEL-GNLVQLEYLDFSMNMLDGHIPEKLC-SLPYLLYLNLA 602
L S +P L +L+ L N L +P L P L L+LA
Sbjct: 112 L--------TS------LPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLA 156
Query: 603 DNRL 606
+N L
Sbjct: 157 NNNL 160
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 8e-13
Identities = 57/285 (20%), Positives = 87/285 (30%), Gaps = 86/285 (30%)
Query: 135 LTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194
+ ++ + T +P +L K L S N L + L T+L L+L
Sbjct: 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRI 254
L+ L V L L LD+S+N L ++P L L+ L +
Sbjct: 66 ELT-KLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV-------------- 107
Query: 255 TPEIGNCSMLKYISLSNNKLSGPIPRELCNS-GSLVEINLDGNMLSGTIEDVFDRCTNLS 313
S N+L+ +P G L E+ L GN L + L
Sbjct: 108 ---------------SFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 314 ELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSL 373
+L L NN ++ELP + + L
Sbjct: 152 KLSLANNN--------LTELPAGLLN------------------GL-------------- 171
Query: 374 SWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFD 418
L+ L L N L IPK + L+ N +
Sbjct: 172 -------ENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWL 208
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 33/154 (21%), Positives = 51/154 (33%), Gaps = 31/154 (20%)
Query: 463 GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLY 522
+S++ + +N LT ++PP+ + L+L N L +
Sbjct: 4 CEVSKVASHLEVNCDKRNLT-ALPPDLPKDTTI--LHLSENLLY-TFS------------ 47
Query: 523 GSVPTSFGNLNGLTHLDLSCNELDGI---------VGLYVQSNKFYGEIPPELGNLVQLE 573
+ LT L+L EL + L + N+ +P L L
Sbjct: 48 ---LATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQL-QSLPLLGQTLPALT 103
Query: 574 YLDFSMNMLDGHIPEKL-CSLPYLLYLNLADNRL 606
LD S N L +P L L L L N L
Sbjct: 104 VLDVSFNRLT-SLPLGALRGLGELQELYLKGNEL 136
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 4e-22
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYC 726
V+G G + + G + +Q +A+K++ + + + E+ +KH+N+VQ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG-S 87
Query: 727 SVGEEKLLVY-EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAA--RGISFLH-HGFKPYI 782
+ ++ E + GSL LR++ L ++ Y G+ +LH + I
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ----I 143
Query: 783 IHMDIKTSNILLNDYF-EAKVSDFGLARLISDCESHVSTDTA-------DTIGYVPSEYG 834
+H DIK N+L+N Y K+SDFG ++ ++ T T + I P YG
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 835 QAGRANERGDIYSFGVILLELVTGKQP 861
+A DI+S G ++E+ TGK P
Sbjct: 204 KA------ADIWSLGCTIIEMATGKPP 224
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 97.3 bits (242), Expect = 4e-22
Identities = 54/280 (19%), Positives = 90/280 (32%), Gaps = 22/280 (7%)
Query: 83 FLFNLSSLRILDLSKNLLFGQL-SPQVSNLKRLKMLSVGENQLSGSIPSQLGLL---TRL 138
SL L + + LK L+V ++ I + + L
Sbjct: 38 LYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGL 97
Query: 139 ETISLRSNSFTGEMPSELGDI--KQLKSLDFSGNGLNGTIPSRLGDL-----TQLQDLDL 191
+ ++L + TG P L + L L+ + L +L L+ L +
Sbjct: 98 QELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWAT-RDAWLAELQQWLKPGLKVLSI 156
Query: 192 SDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIP-PEIGNLKKLSDL-YLGIGPYQLSL 249
+ + ++ +LS LD+S+N G K L L + +
Sbjct: 157 AQAHSL-NFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMET 215
Query: 250 FVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC-NSGSLVEINLDGNMLSGTIEDVFDR 308
G + L+ + LS+N L C L +NL L + +
Sbjct: 216 PSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP-- 273
Query: 309 CTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTG 347
LS L L NR+ P ELP + L+ N F
Sbjct: 274 -AKLSVLDLSYNRLD-RNPS-PDELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 88.4 bits (219), Expect = 4e-19
Identities = 45/212 (21%), Positives = 66/212 (31%), Gaps = 23/212 (10%)
Query: 78 GPVSPFLFNLSSLRILDLSKNLL--FGQLSPQVSNL--KRLKMLSVGENQLSGSIPSQLG 133
P L IL+L ++ LK+LS+ + Q+
Sbjct: 111 APPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVR 170
Query: 134 LLTRLETISLRSNSFTGEMPSE----LGDIKQLKSLDFSGNGLN---GTIPSRLGDLTQL 186
+ L T+ L N GE L+ L G+ G + QL
Sbjct: 171 VFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQL 230
Query: 187 QDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPY- 245
Q LDLS N L + L+ L++S L +P + KLS L L Y
Sbjct: 231 QGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQ-VPKGL--PAKLSVLDLS---YN 284
Query: 246 QLSLFVGRITPEIGNCSMLKYISLSNNKLSGP 277
+L P + +SL N
Sbjct: 285 RLDRN-----PSPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 84.9 bits (210), Expect = 5e-18
Identities = 54/337 (16%), Positives = 88/337 (26%), Gaps = 75/337 (22%)
Query: 157 GDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLK--NLQSLSYL 214
G L + + + L+ L + + + L+ + L L
Sbjct: 41 GGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQEL 100
Query: 215 DVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKL 274
+ N ++G PP + L ++L N
Sbjct: 101 TLENLEVTGTAPPPLLEATGPD---------------------------LNILNLRNVSW 133
Query: 275 SGPIPR----ELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYI 330
+ + L +++ + LS L L +N G
Sbjct: 134 ATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193
Query: 331 SELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSS 390
+ PLK LQ NA G S + V L+ LDLS
Sbjct: 194 ALCPLKFPTLQVLALR----------------NAGMETPSGVCSALAAARVQLQGLDLSH 237
Query: 391 NMLTRQIPKKI-GNLTNIQILKLNSNFFDGIIPMEFGDCI--SLNTLDLGSNNLNGCVVV 447
N L + + L L+ + + L+ LDL N L+
Sbjct: 238 NSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPK-----GLPAKLSVLDLSYNRLDR---- 288
Query: 448 VYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS 484
P S L + L+L GN S
Sbjct: 289 -------------NP-SPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 3e-17
Identities = 61/338 (18%), Positives = 103/338 (30%), Gaps = 54/338 (15%)
Query: 283 CN-SGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGS--IPEYISELPLKVFD 339
CN S + + N L +++ +L L+ + + + I L LK
Sbjct: 15 CNFSDPKPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLT 74
Query: 340 LQYNNFTGVIPVS---LWNSENLMEFNAASNLLEGSLSWEISNAV--ALEKLDLSSNMLT 394
++ I + L E + + G+ + A L L+L +
Sbjct: 75 VRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWA 134
Query: 395 --RQIPKKIGNL--TNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYL 450
++ +++L + + +L+TLDL N G
Sbjct: 135 TRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELG------- 187
Query: 451 LLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIP 510
++S P L L N +G +++QGL L HN L +
Sbjct: 188 --ERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245
Query: 511 ESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLV 570
S + L L+LS L ++P L
Sbjct: 246 ---------------APSCDWPSQLNSLNLSFTGLK--------------QVPKGLPA-- 274
Query: 571 QLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEG 608
+L LD S N LD P LP + L+L N
Sbjct: 275 KLSVLDLSYNRLD-RNP-SPDELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 81.1 bits (200), Expect = 1e-16
Identities = 49/274 (17%), Positives = 85/274 (31%), Gaps = 50/274 (18%)
Query: 376 EISNAVALEKLDLSSNMLTRQIPK---KIGNLTNIQILKLNSNFFDGIIPMEFGDCI--S 430
+I +++L++L + + + +I ++ ++ +Q L L + G P +
Sbjct: 63 DIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPD 122
Query: 431 LNTLDLGSNNLNG------------CVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFG 478
LN L+L + + + L + + L+TL+L
Sbjct: 123 LNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSD 182
Query: 479 NLLTGSIPPEFGDSL----KVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNG 534
N G +Q L L + + G
Sbjct: 183 NPELGERGLISALCPLKFPTLQVLALRNAGM-------------ETPSGVCSALAAARVQ 229
Query: 535 LTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLP 594
L LDLS N L P QL L+ S L +P+
Sbjct: 230 LQGLDLSHNSLRDA------------AGAPSCDWPSQLNSLNLSFTGLK-QVPK--GLPA 274
Query: 595 YLLYLNLADNRLEGEVPRSGICQNLSIISLTGNK 628
L L+L+ NRL+ P + +SL GN
Sbjct: 275 KLSVLDLSYNRLD-RNPSPDELPQVGNLSLKGNP 307
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 61.5 bits (149), Expect = 3e-10
Identities = 38/243 (15%), Positives = 67/243 (27%), Gaps = 35/243 (14%)
Query: 402 GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKI 461
G + +LK D + +SL L + + + ++ L +
Sbjct: 41 GGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLG------- 93
Query: 462 PGSLSRLTNLTTLNLFGNLLTGSIPPEFGD--SLKVQGLYLGHNQLTGSIPESLG----- 514
++ L L L +TG+ PP + + L L +
Sbjct: 94 ------ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWL 147
Query: 515 -------YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELG 567
++ L+ LDLS N G GL P +
Sbjct: 148 KPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL------CPLKFP 201
Query: 568 NLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSG--ICQNLSIISLT 625
L L + M G + L L+L+ N L L+ ++L+
Sbjct: 202 TLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLS 261
Query: 626 GNK 628
Sbjct: 262 FTG 264
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 98.7 bits (246), Expect = 6e-22
Identities = 41/211 (19%), Positives = 83/211 (39%), Gaps = 20/211 (9%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLS-QATGQCDREFAAEMETLDMVKHQNLVQ 721
++V+G G T M D + VAVK++ + DRE + D +H N+++
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQL-LRESD--EHPNVIR 82
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKP 780
+ + + E +L +++ + + + + G++ LH
Sbjct: 83 YFCTEKDRQFQYIAIEL-CAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN--- 138
Query: 781 YIIHMDIKTSNILL-----NDYFEAKVSDFGLARLISDCES--HVSTDTADTIGYVPSEY 833
I+H D+K NIL+ + +A +SDFGL + ++ + T G++ E
Sbjct: 139 -IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM 197
Query: 834 ---GQAGRANERGDIYSFGVILLELVTGKQP 861
DI+S G + +++
Sbjct: 198 LSEDCKENPTYTVDIFSAGCVFYYVISEGSH 228
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 6e-22
Identities = 47/205 (22%), Positives = 77/205 (37%), Gaps = 25/205 (12%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQAT-GQCDREFA-AEMETL-DMVKHQNLVQLL 723
+G G + FK D + AVK+ G DR AE+ + + +H V+L
Sbjct: 64 RLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL- 122
Query: 724 GYCSVGEEKLL--VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKP 780
+ E +L E SL ASL + ++ LH G
Sbjct: 123 -EQAWEEGGILYLQTEL-CGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG--- 177
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IG---YVPSEYGQA 836
++H+D+K +NI L K+ DFGL + + + G Y+ E Q
Sbjct: 178 -LVHLDVKPANIFLGPRGRCKLGDFGLLVELG------TAGAGEVQEGDPRYMAPELLQG 230
Query: 837 GRANERGDIYSFGVILLELVTGKQP 861
D++S G+ +LE+ +
Sbjct: 231 S-YGTAADVFSLGLTILEVACNMEL 254
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 96.4 bits (240), Expect = 1e-21
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 44/248 (17%)
Query: 654 VGSVLVIAI--IVFENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMET 710
VG + + + V+ GGF ++ + + A+K+L + +R E+
Sbjct: 19 VGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCF 78
Query: 711 L-DMVKHQNLVQLLGYCSVGEEKLL--VYEYMV-----NGSLDDWLRNRAASLDWGKR-- 760
+ + H N+VQ S+G+E+ E+++ G L ++L+ +
Sbjct: 79 MKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMES----RGPLS 134
Query: 761 ----CKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816
KI Y R + +H KP IIH D+K N+LL++ K+ DFG A IS
Sbjct: 135 CDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISH--Y 191
Query: 817 HVSTDTADTIGYVPSEYGQAG----RA------------NERGDIYSFGVILLELVTGKQ 860
+ +A V E + R E+ DI++ G IL L +
Sbjct: 192 PDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQH 251
Query: 861 PTGPEFED 868
P FED
Sbjct: 252 P----FED 255
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 3e-21
Identities = 51/212 (24%), Positives = 82/212 (38%), Gaps = 12/212 (5%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKK--LSQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
IG G F A D + +K+ +S+ + + E E+ L +KH N+VQ
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
+V +Y G L + + + + +H I+
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKIL 147
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERG 843
H DIK+ NI L ++ DFG+AR+++ T Y+ E + N +
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIG-TPYYLSPEICENKPYNNKS 206
Query: 844 DIYSFGVILLELVTGKQPTGPEFEDKDGGNLV 875
DI++ G +L EL T K FE NLV
Sbjct: 207 DIWALGCVLYELCTLKHA----FEAGSMKNLV 234
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 5e-21
Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 8/156 (5%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
++SL + L+ + L+ + +K L++ + P + L+ LE + +
Sbjct: 42 QMNSLTYITLANINV-TDLTG-IEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMG 97
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205
T + L + L LD S + + +I +++ L ++ +DLS N + L
Sbjct: 98 KDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI--MPL 155
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLG 241
K L L L++ + + + I + KL+ LY
Sbjct: 156 KTLPELKSLNIQFDGVH-DYRG-IEDFPKLNQLYAF 189
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 6e-19
Identities = 23/138 (16%), Positives = 58/138 (42%), Gaps = 6/138 (4%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
+++ L ++ +P +S L L+ L + ++ L LT L + +
Sbjct: 64 YAHNIKDLTINNIHA-TNYNP-ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISH 121
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205
++ + +++ + ++ S+D S NG I L L +L+ L++ + + +
Sbjct: 122 SAHDDSILTKINTLPKVNSIDLSYNGAITDIMP-LKTLPELKSLNIQFDGVHD---YRGI 177
Query: 206 KNLQSLSYLDVSNNLLSG 223
++ L+ L + + G
Sbjct: 178 EDFPKLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 2e-16
Identities = 34/194 (17%), Positives = 75/194 (38%), Gaps = 20/194 (10%)
Query: 109 SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168
S K +G++ + +Q + L I+L + + T + + +K L +
Sbjct: 20 STFKAYLNGLLGQSSTANITEAQ---MNSLTYITLANINVTDL--TGIEYAHNIKDLTIN 74
Query: 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE 228
P + L+ L+ L + ++ S + L L SL+ LD+S++ +I +
Sbjct: 75 NIHATNYNP--ISGLSNLERLRIMGKDVT-SDKIPNLSGLTSLTLLDISHSAHDDSILTK 131
Query: 229 IGNLKKLSDLYLGIGPYQLSLFVGRIT--PEIGNCSMLKYISLSNNKLSGPIPRELCNSG 286
I L K++ + L + G IT + LK +++ + + + +
Sbjct: 132 INTLPKVNSIDLS--------YNGAITDIMPLKTLPELKSLNIQFDGVHDYRG--IEDFP 181
Query: 287 SLVEINLDGNMLSG 300
L ++ + G
Sbjct: 182 KLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 2e-14
Identities = 28/182 (15%), Positives = 62/182 (34%), Gaps = 14/182 (7%)
Query: 310 TNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNL 368
+ + S + +++ L L N T + + + N+ + +
Sbjct: 20 STFKAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDLTGIE--YAHNIKDLTINNIH 77
Query: 369 LEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDC 428
+ + IS LE+L + +T + LT++ +L ++ + D I +
Sbjct: 78 AT-NYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTL 135
Query: 429 ISLNTLDLGSNN-------LNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLL 481
+N++DL N L + L + + + G + L L F +
Sbjct: 136 PKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVH-DYRG-IEDFPKLNQLYAFSQTI 193
Query: 482 TG 483
G
Sbjct: 194 GG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 3e-14
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Query: 83 FLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETIS 142
+ LS+L L + + P +S L L +L + + SI +++ L ++ +I
Sbjct: 83 PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142
Query: 143 LRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSG 198
L N + L + +LKSL+ +G++ + D +L L + G
Sbjct: 143 LSYNGAITD-IMPLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 7e-14
Identities = 25/205 (12%), Positives = 60/205 (29%), Gaps = 40/205 (19%)
Query: 382 ALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN-- 439
+ + + ++ + L + + +E+ ++ L + +
Sbjct: 21 TFKAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDLTGIEY--AHNIKDLTINNIHA 78
Query: 440 ----NLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKV 495
++G + L + ++ +LS LT+LT L++ + SI + KV
Sbjct: 79 TNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKV 138
Query: 496 QGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQS 555
+ L +N I L L L++ + + G
Sbjct: 139 NSIDLSYNGAITDI-----------------MPLKTLPELKSLNIQFDGVHDYRG----- 176
Query: 556 NKFYGEIPPELGNLVQLEYLDFSMN 580
+ + +L L
Sbjct: 177 ----------IEDFPKLNQLYAFSQ 191
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 1e-12
Identities = 26/209 (12%), Positives = 64/209 (30%), Gaps = 38/209 (18%)
Query: 160 KQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNN 219
K+ G + T + L + L++ ++ + N++ L ++N
Sbjct: 20 STFKAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDLTGIEYAHNIK---DLTINNI 76
Query: 220 LLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIP 279
+ + LS+L + + + ++
Sbjct: 77 HAT-----NYNPISGLSNL--------------------------ERLRIMGKDVTSDKI 105
Query: 280 RELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVF 338
L SL +++ + +I + ++ + L N I + LP LK
Sbjct: 106 PNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP-LKTLPELKSL 164
Query: 339 DLQYNNFTGVIPVSLWNSENLMEFNAASN 367
++Q++ + + L + A S
Sbjct: 165 NIQFDGVHDYRGIE--DFPKLNQLYAFSQ 191
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 5e-12
Identities = 38/247 (15%), Positives = 68/247 (27%), Gaps = 56/247 (22%)
Query: 382 ALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL 441
A E+ L ++ IP L + + SL + L + N+
Sbjct: 2 AAEQTGLKASQDNVNIPDS--TFKAYLNGLLGQS---STANITEAQMNSLTYITLANINV 56
Query: 442 NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLG 501
+ G + N+ L + T P ++ L +
Sbjct: 57 T-----------------DLTG-IEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIM 96
Query: 502 HNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGE 561
+T +L L LT LD+S + D
Sbjct: 97 GKDVTSDKIPNLS----------------GLTSLTLLDISHSAHDDS------------- 127
Query: 562 IPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSI 621
I ++ L ++ +D S N I L +LP L LN+ + + L+
Sbjct: 128 ILTKINTLPKVNSIDLSYNGAITDIMP-LKTLPELKSLNIQFDGVHDYRGIED-FPKLNQ 185
Query: 622 ISLTGNK 628
+
Sbjct: 186 LYAFSQT 192
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
+ L + +DLS N + P + L LK L++ + + + +L +
Sbjct: 130 TKINTLPKVNSIDLSYNGAITDIMP-LKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQL 186
Query: 142 SLRSNSFTGE 151
S + G+
Sbjct: 187 YAFSQTIGGK 196
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 95.1 bits (236), Expect = 5e-21
Identities = 26/262 (9%), Positives = 58/262 (22%), Gaps = 54/262 (20%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDRE---FAAEMETLDMVKH 716
+ + G F D + A+K + E +
Sbjct: 64 LKLVEPLRVGDRSVVFLVR--DVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG 121
Query: 717 QNLVQLLGYCSVG--------------------------EEKLLVYEYMV-----NGSLD 745
++ + + LL+ S
Sbjct: 122 ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTL 181
Query: 746 DWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSD 804
D++ + R + L G ++H N+ + + D
Sbjct: 182 DFVYVFRGDEGILALHILTAQLIRLAANLQSKG----LVHGHFTPDNLFIMPDGRLMLGD 237
Query: 805 FGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA--NERGDIYSFGVILLELVTGKQPT 862
+ ++ + Y P E+ A A + + G+ + + P
Sbjct: 238 VSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP- 292
Query: 863 GPEFEDKDGGNLVDWVLLMMKK 884
F G W ++
Sbjct: 293 ---FGLVTPGIKGSWKRPSLRV 311
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 7e-21
Identities = 45/209 (21%), Positives = 85/209 (40%), Gaps = 18/209 (8%)
Query: 664 VFENV--IGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLV 720
V+E V +G G F +K A K + + + ++ E+E L H +V
Sbjct: 20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIV 79
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
+LLG + ++ E+ G++D + L + + ++FLH
Sbjct: 80 KLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI- 138
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG--Y------VPSE 832
IH D+K N+L+ + +++DFG++ + IG Y V E
Sbjct: 139 --IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS----FIGTPYWMAPEVVMCE 192
Query: 833 YGQAGRANERGDIYSFGVILLELVTGKQP 861
+ + + DI+S G+ L+E+ + P
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEPP 221
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 7e-21
Identities = 84/480 (17%), Positives = 157/480 (32%), Gaps = 103/480 (21%)
Query: 88 SSLRILDLSKNLL----FGQLSPQVSNLKRLKMLSVGENQLS----GSIPSQLGLLTRLE 139
++ LD+ L + +L P + + ++ + + L+ I S L + L
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVR---LDDCGLTEARCKDISSALRVNPALA 59
Query: 140 TISLRSNSFTGEMPSELGDI-----KQLKSLDFSGNGLNGT----IPSRLGDLTQLQDLD 190
++LRSN + +++ L L G + S L L LQ+L
Sbjct: 60 ELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELH 119
Query: 191 LSDNLLSGS----LPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQ 246
LSDNLL + L LL L L + LS + ++
Sbjct: 120 LSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV-------------- 165
Query: 247 LSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC-----NSGSLVEINLDGNMLS-- 299
+ K +++SNN ++ R LC + L + L+ ++
Sbjct: 166 -----------LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSD 214
Query: 300 --GTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP------LKVFDLQYNNFT--GVI 349
+ + +L EL L +N++ + L+ + T G
Sbjct: 215 NCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 274
Query: 350 PVS--LWNSENLMEFNAASNLLEGSLSWEISNAV-----ALEKLDLSSNMLTRQ----IP 398
+ L E+L E + A N L + + + LE L + S T
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334
Query: 399 KKIGNLTNIQILKLNSNFFDGIIPMEFGDCI-----SLNTLDLGSNNL--NGCVVVVYLL 451
+ + L++++N + E + L L L ++ + C + L
Sbjct: 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394
Query: 452 LNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQG-----LYLGHNQLT 506
L N +L L+L N L + + +S++ G L L +
Sbjct: 395 LAN--------------HSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 440
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 3e-16
Identities = 77/470 (16%), Positives = 146/470 (31%), Gaps = 107/470 (22%)
Query: 184 TQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIG 243
+Q LD+ LS + LL LQ + + + L+ K +S
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEA------RCKDISSA----- 51
Query: 244 PYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC-----NSGSLVEINLDGNML 298
+ L ++L +N+L + S + +++L L
Sbjct: 52 --------------LRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 97
Query: 299 SGT----IEDVFDRCTNLSELVLVNNRISGSIPEYISEL------PLKVFDLQYNNFT-- 346
+G + L EL L +N + + + + E L+ L+Y + +
Sbjct: 98 TGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAA 157
Query: 347 GVIPVS--LWNSENLMEFNAASNLLEGSLSWEIS-----NAVALEKLDLSSNMLT----R 395
P++ L + E ++N + + + + LE L L S +T R
Sbjct: 158 SCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR 217
Query: 396 QIPKKIGNLTNIQILKLNSNFFDG-----IIPMEFGDCISLNTLDLGSNNL--NGCVVVV 448
+ + + +++ L L SN + P L TL + + GC +
Sbjct: 218 DLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277
Query: 449 YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLK-----VQGLYLGHN 503
+L +L L+L GN L ++L ++ L++
Sbjct: 278 RVLRAK--------------ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC 323
Query: 504 QLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNEL--DGIVGLYVQSNKFYGE 561
T + S + L L +S N L G+ L Q
Sbjct: 324 SFT---AACCSHFS---------SVLAQNRFLLELQISNNRLEDAGVREL-CQGLGQ--- 367
Query: 562 IPPELGNLVQLEYLDFSMNMLD----GHIPEKLCSLPYLLYLNLADNRLE 607
L L + + + L + L L+L++N L
Sbjct: 368 ------PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 8e-15
Identities = 76/429 (17%), Positives = 145/429 (33%), Gaps = 78/429 (18%)
Query: 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISL 143
L +L L+L N +L G + + + + +++ +SL
Sbjct: 52 LRVNPALAELNLRSN----ELGDV------------GVHCVLQGLQTP---SCKIQKLSL 92
Query: 144 RSNSFTGE----MPSELGDIKQLKSLDFSGNGLNGTIPSRLGDL-----TQLQDLDLSDN 194
++ TG + S L + L+ L S N L L + +L+ L L
Sbjct: 93 QNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYC 152
Query: 195 LLSGSLPVSL---LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFV 251
LS + L L+ L VSNN ++ + K S L L L
Sbjct: 153 SLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEA----LKLES 208
Query: 252 GRITPE--------IGNCSMLKYISLSNNKLSGPIPRELCNSG-----SLVEINLDGNML 298
+T + + + + L+ ++L +NKL ELC L + + +
Sbjct: 209 CGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGI 268
Query: 299 S----GTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL------PLKVFDLQYNNFT-- 346
+ G + V +L EL L N + + E L+ ++ +FT
Sbjct: 269 TAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA 328
Query: 347 GVIPVS--LWNSENLMEFNAASNLLEGSLSWEISNAVA-----LEKLDLSSNMLTRQ--- 396
S L + L+E ++N LE + E+ + L L L+ ++
Sbjct: 329 CCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCS 388
Query: 397 -IPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCI-----SLNTLDLGSNNLN--GCVVVV 448
+ + +++ L L++N ++ + + L L L + +
Sbjct: 389 SLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQ 448
Query: 449 YLLLNNNML 457
L + L
Sbjct: 449 ALEKDKPSL 457
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 6e-13
Identities = 70/388 (18%), Positives = 119/388 (30%), Gaps = 78/388 (20%)
Query: 264 LKYISLSNNKLSGPIPRELCNS-GSLVEINLDGNMLSGT----IEDVFDRCTNLSELVLV 318
++ + + +LS EL + LD L+ I L+EL L
Sbjct: 5 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 64
Query: 319 NNRISGSIPEYISE------LPLKVFDLQYNNFT----GVIPVSLWNSENLMEFNAASNL 368
+N + + + ++ LQ T GV+ +L L E + + NL
Sbjct: 65 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 124
Query: 369 LEGSLSWEISNAV-----ALEKLDLSSNMLT----RQIPKKIGNLTNIQILKLNSNFFDG 419
L + + + LEKL L L+ + + + + L +++N +
Sbjct: 125 LGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINE 184
Query: 420 IIPMEFGDCI-----SLNTLDLGSNNLN--GCVVVVYLLLNNNMLSGKIPGSLSRLTNLT 472
+ L L L S + C + ++ + +L
Sbjct: 185 AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASK--------------ASLR 230
Query: 473 TLNLFGNLLTGSIPPEFGDSLK-----VQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPT 527
L L N L E L ++ L++ +T + G L
Sbjct: 231 ELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGIT---AKGCGDLC---------R 278
Query: 528 SFGNLNGLTHLDLSCNEL--DGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDG- 584
L L L+ NEL +G L L QLE L
Sbjct: 279 VLRAKESLKELSLAGNELGDEGARLL----------CETLLEPGCQLESLWVKSCSFTAA 328
Query: 585 ---HIPEKLCSLPYLLYLNLADNRLEGE 609
H L +LL L +++NRLE
Sbjct: 329 CCSHFSSVLAQNRFLLELQISNNRLEDA 356
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 4e-06
Identities = 49/263 (18%), Positives = 86/263 (32%), Gaps = 56/263 (21%)
Query: 84 LFNLSSLRILDLSKNLL----FGQLSPQVSN-LKRLKMLSVGENQLS----GSIPSQLGL 134
+ + +SLR L L N L +L P + + RL+ L + E ++ G + L
Sbjct: 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRA 282
Query: 135 LTRLETISLRSNSFTGEMPSELGDI-----KQLKSLDFSGNGLNGT----IPSRLGDLTQ 185
L+ +SL N E L + QL+SL S L
Sbjct: 283 KESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRF 342
Query: 186 LQDLDLSDNLLSGS----LPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLG 241
L +L +S+N L + L L + L L +++ +S + L+
Sbjct: 343 LLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS-----DSS-CSSLAAT--- 393
Query: 242 IGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC-----NSGSLVEINLDGN 296
+ L+ + LSNN L +L L ++ L
Sbjct: 394 ----------------LLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDI 437
Query: 297 MLS----GTIEDVFDRCTNLSEL 315
S ++ + +L +
Sbjct: 438 YWSEEMEDRLQALEKDKPSLRVI 460
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 94.4 bits (234), Expect = 1e-20
Identities = 31/264 (11%), Positives = 74/264 (28%), Gaps = 60/264 (22%)
Query: 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-------QCDREFAAE------- 707
+V V+G + T ++ V Q E
Sbjct: 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 139
Query: 708 -----------METLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV-------NGSLDDWLR 749
+ D+VK +++ + ++ + + + + L
Sbjct: 140 NQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL 199
Query: 750 NRAA---SLDWGKRCKIAYGAARGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDF 805
+ ++ SL R ++ R ++ LH +G ++H ++ +I+L+ ++ F
Sbjct: 200 SHSSTHKSLVHHARLQLTLQVIRLLASLHHYG----LVHTYLRPVDIVLDQRGGVFLTGF 255
Query: 806 GLARLISDCESHVSTDTADTIGYVPSEY----------GQAGRANERGDIYSFGVILLEL 855
S + G+ P E D ++ G+ + +
Sbjct: 256 EHLVRDGA-----SAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI 310
Query: 856 VTGKQPTGPEFEDKDGGNLVDWVL 879
P D +W+
Sbjct: 311 WCADLP----NTDDAALGGSEWIF 330
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 3e-20
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 12/216 (5%)
Query: 663 IVFENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAA-EMETLDMVKHQNLV 720
+ +G G FK + P +A K + R E++ L +V
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
G E + E+M GSLD L+ +A + K++ +G+++L K
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHK- 152
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISD--CESHVSTDTADTIGYVPSEYGQAGR 838
I+H D+K SNIL+N E K+ DFG++ + D S V T + Y+ E Q
Sbjct: 153 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPERLQGTH 206
Query: 839 ANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNL 874
+ + DI+S G+ L+E+ G+ P P +
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 242
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 5e-20
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 20/174 (11%)
Query: 707 EMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYG 766
E++ + +K++ + G + +E ++YEYM N S+ + LD C I
Sbjct: 93 ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFF-VLDKNYTCFIPIQ 151
Query: 767 AAR--------GISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818
+ S++H+ I H D+K SNIL++ K+SDFG + + D +
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVD--KKI 207
Query: 819 STDTADTIGYVPSE--YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
+ T ++P E ++ + DI+S G+ L + P F K
Sbjct: 208 KG-SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP----FSLKI 256
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 6e-20
Identities = 43/207 (20%), Positives = 76/207 (36%), Gaps = 23/207 (11%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKK--LSQATGQCDREFA-AEMETLDMVKHQNLVQLL 723
IG G F ++ + D VA+KK + R E++ L + H N+++
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKR------CKIAYGAARGISFLHHG 777
E +V E G L +++ + K + +H
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQ---KRLIPERTVWKYFVQLCSALEHMH-- 153
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG---YVPSEYG 834
++H DIK +N+ + K+ D GL R S + + +G Y+ E
Sbjct: 154 -SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS----LVGTPYYMSPERI 208
Query: 835 QAGRANERGDIYSFGVILLELVTGKQP 861
N + DI+S G +L E+ + P
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSP 235
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 7e-20
Identities = 50/221 (22%), Positives = 78/221 (35%), Gaps = 21/221 (9%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKK--LSQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
IG G + K D K + K+ T + +E+ L +KH N+V+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 725 YCSVGEEKLL--VYEYMVNGSLDDWLRNRAASLDWGKR------CKIAYGAARGISFLH- 775
L V EY G L + + ++ + H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKE---RQYLDEEFVLRVMTQLTLALKECHR 129
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834
++H D+K +N+ L+ K+ DFGLAR+++ S T T Y+ E
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVG-TPYYMSPEQM 188
Query: 835 QAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLV 875
NE+ DI+S G +L EL P F L
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPP----FTAFSQKELA 225
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 91.9 bits (228), Expect = 7e-20
Identities = 39/209 (18%), Positives = 68/209 (32%), Gaps = 17/209 (8%)
Query: 667 NVIGGG--GFRTAFKGT-MPDQKTVAVKK--LSQATGQCDREFAAEMETLDMVKHQNLVQ 721
VIG G T P + V V++ L + + E+ + H N+V
Sbjct: 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVP 90
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAAS-LDWGKRCKIAYGAARGISFLHHGFKP 780
E +V +M GS D + ++ I G + + ++HH
Sbjct: 91 YRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGY- 149
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA---- 836
+H +K S+IL++ + +S + V +
Sbjct: 150 --VHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVL 207
Query: 837 ----GRANERGDIYSFGVILLELVTGKQP 861
+ + DIYS G+ EL G P
Sbjct: 208 QQNLQGYDAKSDIYSVGITACELANGHVP 236
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 8e-20
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQLLGY 725
IG G F FKG QK VA+K + + + E E+ L + + G
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG- 87
Query: 726 CSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIH 784
+ + KL ++ EY+ GS D L LD + I +G+ +LH K IH
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKK---IH 142
Query: 785 MDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG--Y--VPSEYGQAGRAN 840
DIK +N+LL+++ E K++DFG+A ++D + +T +G + P E + +
Sbjct: 143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT----FVGTPFWMAP-EVIKQSAYD 197
Query: 841 ERGDIYSFGVILLELVTGKQP 861
+ DI+S G+ +EL G+ P
Sbjct: 198 SKADIWSLGITAIELARGEPP 218
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 1e-19
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQLLGY 725
VIG G P ++ VA+K+++ Q + E++ + H N+V Y
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY--Y 79
Query: 726 CS-VGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRC----KIAY---GAARGISFLHH 776
S V +++L LV + + GS+ D +++ A + IA G+ +LH
Sbjct: 80 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT-IG--Y--VPS 831
+ IH D+K NILL + +++DFG++ ++ T +G P
Sbjct: 140 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
Query: 832 EYGQAGRANERGDIYSFGVILLELVTGKQP 861
Q + + DI+SFG+ +EL TG P
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATGAAP 226
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 2e-19
Identities = 43/206 (20%), Positives = 74/206 (35%), Gaps = 25/206 (12%)
Query: 667 NVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGY 725
+G G F + AVKK+ + + E+ + +V L G
Sbjct: 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPLYG- 117
Query: 726 CSVGEEKLLVY-EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPYII 783
+ ++ E + GSL ++ L + A G+ +LH I+
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLHTRR----IL 172
Query: 784 HMDIKTSNILLNDY-FEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY-------GQ 835
H D+K N+LL+ A + DFG A + S T D I +E
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI--PGTETHMAPEVVMG 230
Query: 836 AGRANERGDIYSFGVILLELVTGKQP 861
+ + DI+S ++L ++ G P
Sbjct: 231 KP-CDAKVDIWSSCCMMLHMLNGCHP 255
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 89.0 bits (221), Expect = 2e-19
Identities = 47/247 (19%), Positives = 83/247 (33%), Gaps = 41/247 (16%)
Query: 664 VFENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQ 721
+ +++G G F+G A+K + + + E E L + H+N+V+
Sbjct: 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 722 LLGYCSVGEEKL--LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR--------GI 771
L + L+ E+ GSL L + G+
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP------SNAYGLPESEFLIVLRDVVGGM 125
Query: 772 SFLH-HGFKPYIIHMDIKTSNILLNDYFEA----KVSDFGLARLISDCESHVSTDTADTI 826
+ L +G I+H +IK NI+ + K++DFG AR + D T
Sbjct: 126 NHLRENG----IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED--DEQFVSLYGTE 179
Query: 827 GYVPSEYGQAGRANERG--------DIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWV 878
Y+ + + + D++S GV TG P F +G V
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP----FRPFEGPRRNKEV 235
Query: 879 LLMMKKE 885
+ +
Sbjct: 236 MYKIITG 242
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 4e-19
Identities = 50/241 (20%), Positives = 91/241 (37%), Gaps = 40/241 (16%)
Query: 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETL-DMVKHQNLV 720
++V E ++G G T + VAVK++ E++ L + H N++
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI---DFCDIALMEIKLLTESDDHPNVI 72
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKR------CKIAYGAARGISFL 774
+ + + E N +L D + ++ S + K + A G++ L
Sbjct: 73 RYYCSETTDRFLYIALEL-CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 775 H-HGFKPYIIHMDIKTSNILL-------------NDYFEAKVSDFGLARLISDCESHVST 820
H IIH D+K NIL+ + +SDFGL + + +S T
Sbjct: 132 HSLK----IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 821 DTAD---TIGYVPSE-------YGQAGRANERGDIYSFGVILLELVT-GKQPTGPEFEDK 869
+ + T G+ E R DI+S G + +++ GK P G ++ +
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
Query: 870 D 870
Sbjct: 248 S 248
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 5e-19
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 23/208 (11%)
Query: 664 VFENV--IGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLV 720
+ IG G T + + + VA+++++ E+ + K+ N+V
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAY---GAARGISFLHHG 777
L VG+E +V EY+ GSL D + IA + + FLH
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ-----IAAVCRECLQALEFLHSN 135
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG--Y--VPSEY 833
IH DIK+ NILL K++DFG I+ +S ST +G Y P E
Sbjct: 136 QV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST----MVGTPYWMAP-EV 187
Query: 834 GQAGRANERGDIYSFGVILLELVTGKQP 861
+ DI+S G++ +E++ G+ P
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 5e-19
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 23/208 (11%)
Query: 664 VFENV--IGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLV 720
+ ++ IG G + VAVK + Q E+ + +H N+V
Sbjct: 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVV 105
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAY---GAARGISFLHHG 777
++ VGEE ++ E++ G+L D + + + IA + +++LH
Sbjct: 106 EMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQ-----IATVCEAVLQALAYLH-- 158
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG--Y--VPSEY 833
+IH DIK+ +ILL K+SDFG IS + +G Y P E
Sbjct: 159 -AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS----LVGTPYWMAP-EV 212
Query: 834 GQAGRANERGDIYSFGVILLELVTGKQP 861
DI+S G++++E+V G+ P
Sbjct: 213 ISRSLYATEVDIWSLGIMVIEMVDGEPP 240
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 88.5 bits (219), Expect = 8e-19
Identities = 26/265 (9%), Positives = 72/265 (27%), Gaps = 61/265 (23%)
Query: 663 IVFENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE------------------ 703
+V V+G + T ++ V
Sbjct: 75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 134
Query: 704 ----------FAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV----NGSLDDWLR 749
F + + + + ++++ + Y + + L
Sbjct: 135 NQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL 194
Query: 750 NRAA---SLDWGKRCKIAYGAARGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDF 805
+ ++ SL R ++ R ++ LH +G ++H ++ +I+L+ ++ F
Sbjct: 195 SHSSTHKSLVHHARLQLTLQVIRLLASLHHYG----LVHTYLRPVDIVLDQRGGVFLTGF 250
Query: 806 GLARLISDCESHVSTDTADTIGYVPSEY-----------GQAGRANERGDIYSFGVILLE 854
++ + G+ P E + D ++ G+++
Sbjct: 251 EHLVRDGA-----RVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305
Query: 855 LVTGKQPTGPEFEDKDGGNLVDWVL 879
+ P +W+
Sbjct: 306 IWCADLP----ITKDAALGGSEWIF 326
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 9e-19
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 666 ENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
+G G + + +K + VA+K++ +E E+ + ++V+ G
Sbjct: 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVKYYG 91
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIH 784
+ +V EY GS+ D +R R +L + I +G+ +LH K IH
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IH 148
Query: 785 MDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG---YVPSEYGQAGRANE 841
DIK NILLN AK++DFG+A ++D + +T IG ++ E Q N
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT----VIGTPFWMAPEVIQEIGYNC 204
Query: 842 RGDIYSFGVILLELVTGKQP 861
DI+S G+ +E+ GK P
Sbjct: 205 VADIWSLGITAIEMAEGKPP 224
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 88.4 bits (219), Expect = 1e-18
Identities = 47/246 (19%), Positives = 82/246 (33%), Gaps = 41/246 (16%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQL 722
+++G G F+G A+K + + + E E L + H+N+V+L
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 723 LGYCSVGEEKL--LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR--------GIS 772
+ L+ E+ GSL L + G++
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEP------SNAYGLPESEFLIVLRDVVGGMN 126
Query: 773 FLH-HGFKPYIIHMDIKTSNILLNDYFEA----KVSDFGLARLISDCESHVSTDTADTIG 827
L +G I+H +IK NI+ + K++DFG AR + D T
Sbjct: 127 HLRENG----IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED--DEQFVSLYGTEE 180
Query: 828 YVPSEYGQAGRANERG--------DIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
Y+ + + + D++S GV TG P F +G V+
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP----FRPFEGPRRNKEVM 236
Query: 880 LMMKKE 885
+
Sbjct: 237 YKIITG 242
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 2e-18
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVKKLS----QATGQCDREFAAEMETLDMVKHQNLVQLL 723
+G G F ++ + VA+K + G R E++ +KH ++++L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQR-VQNEVKIHCQLKHPSILELY 77
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPYI 782
Y LV E NG ++ +L+NR + + G+ +LH HG I
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG----I 133
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE------YGQA 836
+H D+ SN+LL K++DFGLA + T T Y+ E +G
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRSAHG-- 190
Query: 837 GRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
D++S G + L+ G+ P F+
Sbjct: 191 ----LESDVWSLGCMFYTLLIGRPP----FDTDT 216
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 3e-18
Identities = 54/213 (25%), Positives = 84/213 (39%), Gaps = 22/213 (10%)
Query: 663 IVFENVIGGGGFRTAFKGT-MPDQKTVAVKKL-----SQATGQCDREFAAEMETLDMVKH 716
+ IG G + + K P + +AVK++ + Q + M + D
Sbjct: 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSD---C 80
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKR----CKIAYGAARGIS 772
+VQ G + + E M + S D + + + LD KI + ++
Sbjct: 81 PYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 773 FLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGY---- 828
L K IIH DIK SNILL+ K+ DFG++ + D S T A Y
Sbjct: 140 HLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVD--SIAKTRDAGCRPYMAPE 195
Query: 829 VPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
+ R D++S G+ L EL TG+ P
Sbjct: 196 RIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 3e-18
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETL-DMVKHQNLVQLLG- 724
++G G + +KG + + A+K + TG + E E+ L H+N+ G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMD-VTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 725 ----YCSVGEEKL-LVYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGF 778
+++L LV E+ GS+ D ++N + +L I RG+S LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH--- 146
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG--Y------VP 830
+ +IH DIK N+LL + E K+ DFG++ + +T IG Y +
Sbjct: 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT----FIGTPYWMAPEVIA 202
Query: 831 SEYGQAGRANERGDIYSFGVILLELVTGKQP 861
+ + + D++S G+ +E+ G P
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 3e-18
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 25/214 (11%)
Query: 663 IVFENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQ---- 717
+ +G G + K +P + +AVK++ +AT + M+ LD+
Sbjct: 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMD-LDISMRTVDCP 66
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKR------CKIAYGAARGI 771
V G + + E M + SLD + + +D G+ KIA + +
Sbjct: 67 FTVTFYGALFREGDVWICMELM-DTSLDKFYKQ---VIDKGQTIPEDILGKIAVSIVKAL 122
Query: 772 SFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGY--- 828
LH +IH D+K SN+L+N + K+ DFG++ + D A Y
Sbjct: 123 EHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD--DVAKDIDAGCKPYMAP 178
Query: 829 -VPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
+ + + DI+S G+ ++EL + P
Sbjct: 179 ERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 4e-18
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 26/192 (13%)
Query: 688 VAVKKLS----QATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGS 743
+A+K L + G + E+E ++H N+++L GY L+ EY G+
Sbjct: 37 LALKVLFKAQLEKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 95
Query: 744 LDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKV 802
+ L+ + + D + A +S+ H +IH DIK N+LL E K+
Sbjct: 96 VYRELQ-KLSKFDEQRTATYITELANALSYCHSKR----VIHRDIKPENLLLGSAGELKI 150
Query: 803 SDFGLARLISDCESHVSTDTADTI----GYVPSEYGQAGRANERGDIYSFGVILLELVTG 858
+DFG + H + + Y+P E + +E+ D++S GV+ E + G
Sbjct: 151 ADFGWS-------VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
Query: 859 KQPTGPEFEDKD 870
K P FE
Sbjct: 204 KPP----FEANT 211
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 88.2 bits (218), Expect = 4e-18
Identities = 48/220 (21%), Positives = 83/220 (37%), Gaps = 28/220 (12%)
Query: 664 VFENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQ 721
+ +G GGF + + VA+K+ Q +RE + E++ + + H N+V
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 722 LL------GYCSVGEEKLLVYEYMVNGSLDDWL--RNRAASLDWGKRCKIAYGAARGISF 773
+ + LL EY G L +L L G + + + +
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136
Query: 774 LH-HGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTADTI--- 826
LH + IIH D+K NI+L + K+ D G A+ + +
Sbjct: 137 LHENR----IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ------GELCTEFVGT 186
Query: 827 -GYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865
Y+ E + + D +SFG + E +TG +P P
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 5e-18
Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 29/214 (13%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVKKLS----QATGQCDREFAAEMETLDMVKHQNLVQLL 723
+G GGF F+ + ++ A K + Q ++ + E+ + HQ++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 107
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPYI 782
G+ + +V E SL + + R A + R + G +LH + +
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL-RQIVLGCQYLHRNR----V 162
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE------YGQA 836
IH D+K N+ LN+ E K+ DFGLA + T Y+ E +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFE 221
Query: 837 GRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
D++S G I+ L+ GK P FE
Sbjct: 222 ------VDVWSIGCIMYTLLVGKPP----FETSC 245
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 85.4 bits (211), Expect = 8e-18
Identities = 35/220 (15%), Positives = 67/220 (30%), Gaps = 27/220 (12%)
Query: 665 FENVIGGGGFRTAFKGT------MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQN 718
+++G G F ++ T +++ +K A ME L
Sbjct: 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHM 128
Query: 719 LVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAAS----LDWGKRCKIAYGAARGISFL 774
++ +LV E G+L + + + + G A I +
Sbjct: 129 FMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV 188
Query: 775 HHGFKPYIIHMDIKTSNILLNDYFEA-----------KVSDFGLARLISDCESHVSTDTA 823
H IIH DIK N +L + F + D G + +
Sbjct: 189 H---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK 245
Query: 824 -DTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQP 861
+T G+ E + + N + D + + ++ G
Sbjct: 246 CETSGFQCVEM-LSNKPWNYQIDYFGVAATVYCMLFGTYM 284
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 9e-18
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 30/213 (14%)
Query: 664 VFENV--IGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFA---AEMETLDMVKHQ 717
+F ++ IG G F + + + + VA+KK+S + Q + ++ E+ L ++H
Sbjct: 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 114
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
N +Q G LV EY GS D L L + + +GA +G+++LH
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST---------DTADTIGY 828
IH D+K NILL++ K+ DFG A +++ S V T D Y
Sbjct: 174 NM---IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQY 230
Query: 829 VPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
+ + D++S G+ +EL K P
Sbjct: 231 -----------DGKVDVWSLGITCIELAERKPP 252
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 1e-17
Identities = 44/289 (15%), Positives = 79/289 (27%), Gaps = 90/289 (31%)
Query: 283 CNSGSLVEI-----------NLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYIS 331
C + +I +L N L F L L L I
Sbjct: 14 CMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE--------IQ 65
Query: 332 ELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSN 391
+ + + L L L+ N
Sbjct: 66 TIEDGAYQ---------------------------------------SLSHLSTLILTGN 86
Query: 392 MLTRQIPKKI-GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL--------- 441
+ + L+++Q L + G +L L++ N +
Sbjct: 87 PIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 145
Query: 442 NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLT----TLNLFGNLLTGSIPPEFGDSLKVQG 497
+ + +L L++N + L L + +L+L N + I P ++++
Sbjct: 146 SNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKE 204
Query: 498 LYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELD 546
L L NQL S+P+ + F L L + L N D
Sbjct: 205 LALDTNQLK-SVPDGI---------------FDRLTSLQKIWLHTNPWD 237
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 3e-17
Identities = 56/241 (23%), Positives = 94/241 (39%), Gaps = 42/241 (17%)
Query: 88 SSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQL-GLLTRLETISLRS 145
S + LDLS N L L + L++L + ++ +I L+ L T+ L
Sbjct: 28 FSTKNLDLSFNPL-RHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTG 85
Query: 146 NSFT---GEMPSELGDIKQLKSLDFSGNGLNGTIPSRL-GDLTQLQDLDLSDNLLSGSLP 201
N S L L+ L L ++ + G L L++L+++ NL+ S
Sbjct: 86 NPIQSLALGAFSGLS---SLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQ-SFK 140
Query: 202 V-SLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGPYQLSLFVGRITPEIG 259
+ NL +L +LD+S+N + +I L ++ L L
Sbjct: 141 LPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLS------------------ 181
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319
+ LS N ++ I L E+ LD N L + +FDR T+L ++ L
Sbjct: 182 -------LDLSLNPMNF-IQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 233
Query: 320 N 320
N
Sbjct: 234 N 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 1e-14
Identities = 64/321 (19%), Positives = 93/321 (28%), Gaps = 110/321 (34%)
Query: 168 SGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPP 227
IP L ++LDLS N L L + L LD+S + I
Sbjct: 15 MELNFY-KIPDNL--PFSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQ-TIED 69
Query: 228 EI-GNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSG 286
+L LS L L + N + +
Sbjct: 70 GAYQSLSHLSTLIL-----------------------------TGNPIQS-LA------- 92
Query: 287 SLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYI-SELP-LKVFDLQYNN 344
F ++L +LV V ++ S+ + L LK ++ +N
Sbjct: 93 ----------------LGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNL 135
Query: 345 FTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI-GN 403
+ SNL LE LDLSSN + I
Sbjct: 136 IQ-----------SFKLPEYFSNL------------TNLEHLDLSSNKIQS-IYCTDLRV 171
Query: 404 LTNIQI----LKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSG 459
L + + L L+ N + I P F I L L L +N L
Sbjct: 172 LHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLK----------------- 213
Query: 460 KIP-GSLSRLTNLTTLNLFGN 479
+P G RLT+L + L N
Sbjct: 214 SVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 4e-14
Identities = 49/209 (23%), Positives = 70/209 (33%), Gaps = 36/209 (17%)
Query: 449 YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQGLYLGHNQLTG 507
L L+ N L S L L+L + +I SL + L L N +
Sbjct: 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQ- 89
Query: 508 SIPE-------SLG--YLSGNKLYGSVPTSFGNLNGLTHLDLSCNEL---------DGIV 549
S+ SL L G+L L L+++ N + +
Sbjct: 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLT 149
Query: 550 GL---YVQSNKFYGEIPPE-LGNLVQLEY----LDFSMNMLDGHIPEKLCSLPYLLYLNL 601
L + SNK I L L Q+ LD S+N ++ I L L L
Sbjct: 150 NLEHLDLSSNKI-QSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKELAL 207
Query: 602 ADNRLEGEVPRSGICQNLS---IISLTGN 627
N+L+ VP GI L+ I L N
Sbjct: 208 DTNQLK-SVPD-GIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 4e-12
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQL-GLLTRLETISL 143
+LS L L L+ N + L+ S L L+ L E L+ S+ + G L L+ +++
Sbjct: 74 SLSHLSTLILTGNPI-QSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNV 131
Query: 144 RSNSFTG-EMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-LTQLQ----DLDLSDNLLS 197
N ++P ++ L+ LD S N + +I L Q+ LDLS N ++
Sbjct: 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMN 190
Query: 198 GSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYL 240
+ K ++ L L + N L ++P I L L ++L
Sbjct: 191 -FIQPGAFKEIR-LKELALDTNQLK-SVPDGIFDRLTSLQKIWL 231
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 2e-17
Identities = 41/211 (19%), Positives = 83/211 (39%), Gaps = 16/211 (7%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE-FAAEMETL-DMVKHQNLVQLLG 724
+G G +K +AVK++ ++ + + + +++ + +VQ G
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIH 784
+ + E M + + + K+ + + +L +IH
Sbjct: 92 TFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG--VIH 148
Query: 785 MDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERG- 843
D+K SNILL++ + K+ DFG++ + D +A Y+ E +
Sbjct: 149 RDVKPSNILLDERGQIKLCDFGISGRLVD--DKAKDRSAGCAAYMAPERIDPPDPTKPDY 206
Query: 844 ----DIYSFGVILLELVTGKQP---TGPEFE 867
D++S G+ L+EL TG+ P +FE
Sbjct: 207 DIRADVWSLGISLVELATGQFPYKNCKTDFE 237
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 2e-17
Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 17/208 (8%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVKKLS----QATGQCDREFAAEMETLDMVKHQNLVQLL 723
+G GGF F+ + ++ A K + Q ++ + E+ + HQ++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 81
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPYI 782
G+ + +V E SL + + R A L + G +LH + +
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHRNR----V 136
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER 842
IH D+K N+ LN+ E K+ DFGLA + T Y+ E +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFE 195
Query: 843 GDIYSFGVILLELVTGKQPTGPEFEDKD 870
D++S G I+ L+ GK P FE
Sbjct: 196 VDVWSIGCIMYTLLVGKPP----FETSC 219
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 2e-17
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 13/165 (7%)
Query: 707 EMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYG 766
E+E ++H N++++ Y + L+ E+ G L L+ + D +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFDEQRSATFMEE 122
Query: 767 AARGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADT 825
A + + H +IH DIK N+L+ E K++DFG + T D
Sbjct: 123 LADALHYCHERK----VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLD- 177
Query: 826 IGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
Y+P E + +E+ D++ GV+ E + G P F+
Sbjct: 178 --YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP----FDSPS 216
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 3e-17
Identities = 47/225 (20%), Positives = 89/225 (39%), Gaps = 22/225 (9%)
Query: 109 SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168
++ + ++ ++ L ++ I ++ + + + L +
Sbjct: 21 DAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK--SVQGIQYLPNVTKLFLN 76
Query: 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE 228
GN L P L +L L L L +N + +S LK+L+ L L + +N +S +I
Sbjct: 77 GNKLTDIKP--LANLKNLGWLFLDENKVKD---LSSLKDLKKLKSLSLEHNGIS-DING- 129
Query: 229 IGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSL 288
+ +L +L LYLG + + IT + + L +SL +N++S +P L L
Sbjct: 130 LVHLPQLESLYLG------NNKITDITV-LSRLTKLDTLSLEDNQISDIVP--LAGLTKL 180
Query: 289 VEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL 333
+ L N +S + NL L L + + S L
Sbjct: 181 QNLYLSKNHIS-DLRA-LAGLKNLDVLELFSQECLNKPINHQSNL 223
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 4e-17
Identities = 59/271 (21%), Positives = 106/271 (39%), Gaps = 28/271 (10%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
L+S+ + + + + + + L + L + N+L+ I L L L +
Sbjct: 40 VTQNELNSIDQIIANNSDI-KSVQG-IQYLPNVTKLFLNGNKLT-DI-KPLANLKNLGWL 95
Query: 142 SLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201
L N S L D+K+LKSL NG++ I L L QL+ L L +N ++
Sbjct: 96 FLDENKVK--DLSSLKDLKKLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNKITD--- 148
Query: 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT--PEIG 259
+++L L L L + +N +S +I P + L KL +LYL I+ +
Sbjct: 149 ITVLSRLTKLDTLSLEDNQIS-DIVP-LAGLTKLQNLYLS---------KNHISDLRALA 197
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEI-NLDGNMLSGTIEDVFDRCTNLSELVLV 318
L + L + + N + N DG+++ T E + D V
Sbjct: 198 GLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLV--TPEIISDDGDYEKPNVKW 255
Query: 319 NNRISGSIPEYISELPLKVFDLQYNNFTGVI 349
+ + +I P+ + + F G +
Sbjct: 256 HLPEFTNEVSFIFYQPVTIGKAK-ARFHGRV 285
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 4e-17
Identities = 43/237 (18%), Positives = 84/237 (35%), Gaps = 23/237 (9%)
Query: 180 LGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLY 239
+ +L ++ L S+ + +N+ + ++ I L ++ L+
Sbjct: 20 DDAFAETIKDNLKKKSVTD---AVTQNELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLF 74
Query: 240 LGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLS 299
L + I P + N L ++ L NK+ L + L ++L+ N +S
Sbjct: 75 LN------GNKLTDIKP-LANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSLEHNGIS 125
Query: 300 GTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSEN 358
I L L L NN+I + +S L L L+ N + ++P++
Sbjct: 126 -DING-LVHLPQLESLYLGNNKI--TDITVLSRLTKLDTLSLEDNQISDIVPLA--GLTK 179
Query: 359 LMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSN 415
L + N + L ++ L+ L+L S + NL +K
Sbjct: 180 LQNLYLSKNHIS-DLR-ALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDG 234
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 4e-17
Identities = 51/250 (20%), Positives = 93/250 (37%), Gaps = 28/250 (11%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
+ +L K + Q + L + + + + S+ + L + + L
Sbjct: 22 AFAETIKDNLKKKSV-TDAVTQ-NELNSIDQIIANNSDIK-SV-QGIQYLPNVTKLFLNG 77
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205
N T P L ++K L L N + S L DL +L+ L L N +S ++ L
Sbjct: 78 NKLTDIKP--LANLKNLGWLFLDENKV--KDLSSLKDLKKLKSLSLEHNGISD---INGL 130
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT--PEIGNCSM 263
+L L L + NN ++ +I L +L+ L LSL +I+ + +
Sbjct: 131 VHLPQLESLYLGNNKIT-----DITVLSRLTKL------DTLSLEDNQISDIVPLAGLTK 179
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323
L+ + LS N +S R L +L + L + + + + +
Sbjct: 180 LQNLYLSKNHISD--LRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLV 237
Query: 324 GSIPEYISEL 333
PE IS+
Sbjct: 238 T--PEIISDD 245
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 1e-14
Identities = 49/290 (16%), Positives = 98/290 (33%), Gaps = 27/290 (9%)
Query: 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNC 261
+ ++ ++ + L + + + + + I
Sbjct: 17 IFSDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIAN------NSDIKSVQG-IQYL 67
Query: 262 SMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNR 321
+ + L+ NKL+ P L N +L + LD N + + L L L +N
Sbjct: 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK-DLSS-LKDLKKLKSLSLEHNG 123
Query: 322 ISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNA 380
IS I + LP L+ L N T + +S L + N + + ++
Sbjct: 124 IS-DI-NGLVHLPQLESLYLGNNKITDITVLS--RLTKLDTLSLEDNQIS-DIV-PLAGL 177
Query: 381 VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNN 440
L+ L LS N ++ + L N+ +L+L S + + NT+ N
Sbjct: 178 TKLQNLYLSKNHISDLRA--LAGLKNLDVLELFSQECLNKPINHQSNLVVPNTV----KN 231
Query: 441 LNGCVVVVYLLLNNNML-SGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEF 489
+G +V ++ ++ + L TN + + + G F
Sbjct: 232 TDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARF 281
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 2e-14
Identities = 44/236 (18%), Positives = 78/236 (33%), Gaps = 49/236 (20%)
Query: 377 ISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDL 436
K +L +T + L +I + N++ + +++ ++ L L
Sbjct: 20 DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQGIQY--LPNVTKLFL 75
Query: 437 GSN------NLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFG 490
N L + +L L+ N + + L L L +L+L N ++ I
Sbjct: 76 NGNKLTDIKPLANLKNLGWLFLDENKVK-DLSS-LKDLKKLKSLSLEHNGIS-DING-LV 131
Query: 491 DSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVG 550
+++ LYLG+N++T T L L L L N++ I
Sbjct: 132 HLPQLESLYLGNNKITD------------------ITVLSRLTKLDTLSLEDNQISDI-- 171
Query: 551 LYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRL 606
L L +L+ L S N + + L L L L L
Sbjct: 172 -------------VPLAGLTKLQNLYLSKNHIS-DLRA-LAGLKNLDVLELFSQEC 212
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 3e-14
Identities = 55/242 (22%), Positives = 90/242 (37%), Gaps = 29/242 (11%)
Query: 313 SELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEG 371
SE + V I +L+ + T + + ++ + A ++ ++
Sbjct: 5 SETITVPTPIKQIFS--DDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIK- 59
Query: 372 SLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISL 431
S+ I + KL L+ N LT P + NL N+ L L+ N + ++ D L
Sbjct: 60 SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSSLK--DLKKL 114
Query: 432 NTLDLGSN------NLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSI 485
+L L N L + L L NN ++ I LSRLT L TL+L N ++ I
Sbjct: 115 KSLSLEHNGISDINGLVHLPQLESLYLGNNKIT-DITV-LSRLTKLDTLSLEDNQIS-DI 171
Query: 486 PPEFGDSLKVQGLYLGHNQLTGSIPESLG-------YLSGNKLYGSVPTSFGNLNGLTHL 538
P K+Q LYL N ++ + G L + NL +
Sbjct: 172 VP-LAGLTKLQNLYLSKNHIS-DLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTV 229
Query: 539 DL 540
Sbjct: 230 KN 231
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 2e-10
Identities = 45/226 (19%), Positives = 74/226 (32%), Gaps = 58/226 (25%)
Query: 403 NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP 462
L + + S++ + ++++ +
Sbjct: 22 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-----------------SVQ 62
Query: 463 GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLY 522
G + L N+T L L GN LT I P + + L+L N++ +
Sbjct: 63 G-IQYLPNVTKLFLNGNKLT-DIKP-LANLKNLGWLFLDENKVK-DL------------- 105
Query: 523 GSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNML 582
+S +L L L L N + I GL +L QLE L N +
Sbjct: 106 ----SSLKDLKKLKSLSLEHNGISDINGL---------------VHLPQLESLYLGNNKI 146
Query: 583 DGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNK 628
L L L L+L DN++ VP +G L + L+ N
Sbjct: 147 --TDITVLSRLTKLDTLSLEDNQISDIVPLAG-LTKLQNLYLSKNH 189
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 3e-17
Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 22/185 (11%)
Query: 381 VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNN 440
+KLDL SN L+ K LT +++L LN N + F + +L TL + N
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNK 96
Query: 441 L--------NGCVVVVYLLLNNNMLSGKIP-GSLSRLTNLTTLNLFGNLLTGSIPPEFGD 491
L + V + L L+ N L +P LT LT L+L N L S+P D
Sbjct: 97 LQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFD 154
Query: 492 SL-KVQGLYLGHNQLTGSIPE----SLG-----YLSGNKLYGSVPTSFGNLNGLTHLDLS 541
L ++ L L +NQL +PE L L N+L +F +L L L L
Sbjct: 155 KLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213
Query: 542 CNELD 546
N D
Sbjct: 214 ENPWD 218
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 6e-17
Identities = 74/278 (26%), Positives = 100/278 (35%), Gaps = 58/278 (20%)
Query: 387 DLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL----- 441
D SS LT IP I + + L L SN + F L L L N L
Sbjct: 22 DCSSKKLTA-IPSNI--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78
Query: 442 ---NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQG 497
+ L + +N L G +L NL L L N L S+PP DSL K+
Sbjct: 79 GIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTY 137
Query: 498 LYLGHNQLTGSIPE----SLG-----YLSGNKLYGSVPTS-FGNLNGLTHLDLSCNELDG 547
L LG+N+L S+P+ L L N+L VP F L L L L N+L
Sbjct: 138 LSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQL-KRVPEGAFDKLTELKTLKLDNNQLK- 194
Query: 548 IVGLYVQSNKFYGEIPPEL-GNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLN--LADN 604
+P +L +L+ L N D C+ ++Y+ L
Sbjct: 195 -------------RVPEGAFDSLEKLKMLQLQENPWD-------CTCNGIIYMAKWLKKK 234
Query: 605 RLEG-EVPRSGICQNLSIISLTGN--KDLCEKIMGSDC 639
EG + C G ++ EK SDC
Sbjct: 235 ADEGLGGVDTAGC------EKGGKAVLEITEKDAASDC 266
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 1e-13
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRL-GDLTQ 185
+IPS + + + L+SN + + +L+ L + N L T+P+ + +L
Sbjct: 30 AIPS--NIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKN 86
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGP 244
L+ L ++DN L +LP+ + L +L+ L + N L ++PP + +L KL+ L LG
Sbjct: 87 LETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYN- 143
Query: 245 YQL-SLFVG---RITPEIGNCSMLKYISLSNNKLSGPIPRELCNS-GSLVEINLDGNMLS 299
+L SL G ++T LK + L NN+L +P + L + LD N L
Sbjct: 144 -ELQSLPKGVFDKLT-------SLKELRLYNNQLKR-VPEGAFDKLTELKTLKLDNNQLK 194
Query: 300 GTIEDVFDRCTNLSELVLVNN 320
E FD L L L N
Sbjct: 195 RVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 54/222 (24%), Positives = 75/222 (33%), Gaps = 59/222 (26%)
Query: 292 NLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPV 351
+L N LS F R T L L L +N++ LP +F
Sbjct: 43 DLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ--------TLPAGIFK------------ 82
Query: 352 SLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI-GNLTNIQIL 410
LE L ++ N L +P + L N+ L
Sbjct: 83 ---------------------------ELKNLETLWVTDNKLQA-LPIGVFDQLVNLAEL 114
Query: 411 KLNSNFFDGIIPMEFGDCISLNTLDLGSNNL--------NGCVVVVYLLLNNNMLSGKIP 462
+L+ N + P F L L LG N L + + L L NN L
Sbjct: 115 RLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174
Query: 463 GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLK-VQGLYLGHN 503
G+ +LT L TL L N L +P DSL+ ++ L L N
Sbjct: 175 GAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 2e-10
Identities = 59/259 (22%), Positives = 93/259 (35%), Gaps = 81/259 (31%)
Query: 162 LKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLL 221
K LD N L+ LT+L+ L L+DN L +LP + K L++L L V++N L
Sbjct: 39 TKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKL 97
Query: 222 SGNIPPEI-GNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPR 280
+P + L L++L L N+L +P
Sbjct: 98 Q-ALPIGVFDQLVNLAELRL-----------------------------DRNQLKS-LPP 126
Query: 281 ELCNS-GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFD 339
+ +S L ++L N L + VFD+ T+L EL L NN+ + +P FD
Sbjct: 127 RVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQ--------LKRVPEGAFD 178
Query: 340 LQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPK 399
L+ L L +N L R
Sbjct: 179 ---------------------------------------KLTELKTLKLDNNQLKRVPEG 199
Query: 400 KIGNLTNIQILKLNSNFFD 418
+L +++L+L N +D
Sbjct: 200 AFDSLEKLKMLQLQENPWD 218
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 44/166 (26%), Positives = 62/166 (37%), Gaps = 34/166 (20%)
Query: 454 NNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESL 513
N L K G S N +++ LT +IP K L L N+L+ S+P
Sbjct: 1 NEALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIPADTKK--LDLQSNKLS-SLP--- 53
Query: 514 GYLSGNKLYGSVPTSFGNLNGLTHLDLSCNEL--------DGIVGL---YVQSNKFYGEI 562
+F L L L L+ N+L + L +V NK +
Sbjct: 54 ------------SKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKL-QAL 100
Query: 563 PPEL-GNLVQLEYLDFSMNMLDGHIPEKLC-SLPYLLYLNLADNRL 606
P + LV L L N L +P ++ SL L YL+L N L
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNEL 145
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 7e-17
Identities = 42/222 (18%), Positives = 80/222 (36%), Gaps = 37/222 (16%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQAT-GQCDREFA-AEMETL-DMVKHQNLVQLL 723
IG G F + FK D A+K+ + G D + A E+ + +H ++V+
Sbjct: 18 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 77
Query: 724 GYCSVGEEKLLVY-EYMVNGSLDDWLRNRAAS---LDWGKRCKIAYGAARGISFLHHGFK 779
++ +L+ EY GSL D + + + RG+ ++H
Sbjct: 78 S-AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS--- 133
Query: 780 PYIIHMDIKTSNILLN-------------------DYFEAKVSDFGLARLISDCESHVST 820
++HMDIK SNI ++ + K+ D G IS +
Sbjct: 134 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEG- 192
Query: 821 DTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQP 861
++ +E Q + DI++ + ++ +
Sbjct: 193 ----DSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL 230
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 1e-16
Identities = 54/206 (26%), Positives = 83/206 (40%), Gaps = 28/206 (13%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDRE---FAA--EMETLDMVKHQNLVQ 721
+G G + +K + VA+K++ + E A E+ L + H N+V
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDA---EDEGIPSTAIREISLLKELHHPNIVS 83
Query: 722 LLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
L+ E L LV+E+M L L L + Y RG++ H
Sbjct: 84 LIDVI-HSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR-- 139
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE-------Y 833
I+H D+K N+L+N K++DFGLAR T T+ Y + Y
Sbjct: 140 -ILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 834 GQAGRANERGDIYSFGVILLELVTGK 859
+ DI+S G I E++TGK
Sbjct: 198 STS------VDIWSIGCIFAEMITGK 217
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 4e-16
Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 29/211 (13%)
Query: 665 FENVIGGGGFRTAFKGTM-PDQKTVAVK--KLSQATGQCDREFAAEMETLDMVKHQNLVQ 721
+G G + A+K + + + + + E+ L ++ H N+++
Sbjct: 41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMK 100
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNR-------AASLDWGKRCKIAYGAARGISFL 774
L + LV E G L D + +R AA I G+++L
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAA--------VIIKQVLSGVTYL 152
Query: 775 H-HGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVP 830
H H I+H D+K N+LL K+ DFGL+ + + T Y+
Sbjct: 153 HKHN----IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--NQKKMKERLGTAYYIA 206
Query: 831 SEYGQAGRANERGDIYSFGVILLELVTGKQP 861
E + + +E+ D++S GVIL L+ G P
Sbjct: 207 PEVLR-KKYDEKCDVWSIGVILFILLAGYPP 236
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 78.3 bits (194), Expect = 5e-16
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 667 NVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDRE---FAA--EMETLDMVKHQN 718
IG G + T FK +++T VA+K++ D E +A E+ L +KH+N
Sbjct: 8 EKIGEGTYGTVFKAK--NRETHEIVALKRVRLDD---DDEGVPSSALREICLLKELKHKN 62
Query: 719 LVQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
+V+L ++KL LV+E+ + L + + LD + +G+ F H
Sbjct: 63 IVRLHDVL-HSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE----- 832
++H D+K N+L+N E K+++FGLAR + T+ Y P +
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGA 176
Query: 833 --YGQAGRANERGDIYSFGVILLELVTGKQP 861
Y + D++S G I EL +P
Sbjct: 177 KLYSTS------IDMWSAGCIFAELANAGRP 201
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 78.4 bits (193), Expect = 9e-16
Identities = 43/214 (20%), Positives = 70/214 (32%), Gaps = 18/214 (8%)
Query: 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ 721
I+ + N + ++ + ++ +D +N V
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWL--RNRAASLDWGKRCKIAYGAARGISFLH-HGF 778
L S + + +L DW+ R + G I A + FLH G
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG- 184
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD-----------TIG 827
++H D+K SNI KV DFGL + E + T T
Sbjct: 185 ---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241
Query: 828 YVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
Y+ E + + DI+S G+IL EL+
Sbjct: 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFST 275
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 1e-15
Identities = 52/206 (25%), Positives = 83/206 (40%), Gaps = 28/206 (13%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDRE---FAA--EMETLDMVKHQNLVQ 721
IG G + +K +T A+KK+ + E E+ L +KH N+V+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEK---EDEGIPSTTIREISILKELKHSNIVK 64
Query: 722 LLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
L +++L LV+E++ + L L L+ GI++ H
Sbjct: 65 LYDVI-HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-- 120
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE-------Y 833
++H D+K N+L+N E K++DFGLAR T T+ Y + Y
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 834 GQAGRANERGDIYSFGVILLELVTGK 859
DI+S G I E+V G
Sbjct: 179 STT------IDIWSVGCIFAEMVNGT 198
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 1e-15
Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 665 FENVIGGGGFRTAFKGTM-PDQKTVAVKKL--SQATGQCDRE-FAAEMETLDMVKHQNLV 720
+ V+G G F + AVK + Q + D+E E++ L + H N++
Sbjct: 30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR-------AASLDWGKRCKIAYGAARGISF 773
+L + LV E G L D + +R AA +I GI++
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA--------RIIRQVLSGITY 141
Query: 774 LH-HGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISDCESHVSTDTADTIGYV 829
+H + I+H D+K N+LL + ++ DFGL+ S D T Y+
Sbjct: 142 MHKNK----IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTAYYI 195
Query: 830 PSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
E G +E+ D++S GVIL L++G P
Sbjct: 196 APEVLH-GTYDEKCDVWSTGVILYILLSGCPP 226
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 2e-15
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 36/216 (16%)
Query: 666 ENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
E + G G F T G +VA+KK+ Q +RE M+ L ++ H N+VQL
Sbjct: 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQ-IMQDLAVLHHPNIVQLQS 86
Query: 725 Y-CSVGEEKL------LVYEYM---VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
Y ++GE +V EY+ ++ ++ R + + + R I L
Sbjct: 87 YFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQV-APPPILIKVFLFQLIRSIGCL 145
Query: 775 HHGFKPYIIHMDIKTSNILLNDY-FEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY 833
H + H DIK N+L+N+ K+ DFG A+ +S E +V+ Y+ S Y
Sbjct: 146 HLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA--------YICSRY 196
Query: 834 GQAGRANE----------RGDIYSFGVILLELVTGK 859
RA E DI+S G I E++ G+
Sbjct: 197 ---YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 78.0 bits (192), Expect = 2e-15
Identities = 45/226 (19%), Positives = 73/226 (32%), Gaps = 52/226 (23%)
Query: 386 LDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIP-MEFGDCISLNTLDLGSNNLNGC 444
L S L +P+ + + +L L+ N + +L++L L N+LN
Sbjct: 23 LSCSKQQLPN-VPQSL--PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN-- 77
Query: 445 VVVVYLLLNNNMLSGKIP-GSLSRLTNLTTLNLFGNLLTGSIPPE-FGDSLKVQGLYLGH 502
I + + NL L+L N L ++ F D ++ L L +
Sbjct: 78 ---------------FISSEAFVPVPNLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYN 121
Query: 503 NQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEI 562
N + + +F ++ L L LS N++
Sbjct: 122 NHIV-VVD---------------RNAFEDMAQLQKLYLSQNQIS-----RFPVELIKD-- 158
Query: 563 PPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYL--LYLNLADNRL 606
L +L LD S N L L LP L L +N L
Sbjct: 159 ---GNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPL 201
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 2e-11
Identities = 40/167 (23%), Positives = 64/167 (38%), Gaps = 41/167 (24%)
Query: 449 YLLLNNNMLSGKIP--GSLSRLTNLTTLNLFGNLLTGSIPPE-FGDSLKVQGLYLGHNQL 505
L L++N LS ++ + +RLTNL +L L N L I E F ++ L L N L
Sbjct: 43 LLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHL 100
Query: 506 TGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPE 565
++ F +L L L L N + +
Sbjct: 101 H-TLD---------------EFLFSDLQALEVLLLYNNHIV--------------VVDRN 130
Query: 566 -LGNLVQLEYLDFSMNMLDGHIPEK----LCSLPYLLYLNLADNRLE 607
++ QL+ L S N + P + LP L+ L+L+ N+L+
Sbjct: 131 AFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK 176
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 1e-10
Identities = 38/165 (23%), Positives = 59/165 (35%), Gaps = 32/165 (19%)
Query: 83 FLFNLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETI 141
L++L L LS N L +S + + L+ L + N L
Sbjct: 59 TPTRLTNLHSLLLSHNHL-NFISSEAFVPVPNLRYLDLSSNHLH---------------- 101
Query: 142 SLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQLQDLDLSDNLLSGSL 200
+L F+ ++ L+ L N + + D+ QLQ L LS N +S
Sbjct: 102 TLDEFLFSD--------LQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQIS-RF 151
Query: 201 PVSL---LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGI 242
PV L L L LD+S+N L ++ L L +
Sbjct: 152 PVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYL 196
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 1e-09
Identities = 35/157 (22%), Positives = 54/157 (34%), Gaps = 28/157 (17%)
Query: 264 LKYISLSNNKLSGPIPRE-LCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRI 322
L + LS+N L+ I E +L ++L N L E +F L L+L NN I
Sbjct: 66 LHSLLLSHNHLNF-ISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHI 124
Query: 323 SGSIPEYI-SELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNA 380
+ ++ L+ L N + + + L
Sbjct: 125 V-VVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKL--------------------- 162
Query: 381 VALEKLDLSSNMLTRQIPKKIGNLTNI--QILKLNSN 415
L LDLSSN L + + L L L++N
Sbjct: 163 PKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 1e-09
Identities = 41/189 (21%), Positives = 69/189 (36%), Gaps = 18/189 (9%)
Query: 163 KSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222
L S L +P L + LDLS N LS L +L L +S+N L+
Sbjct: 21 NILSCSKQQLP-NVPQSL--PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN 77
Query: 223 GNIPPEI-GNLKKLSDLYLGIGPYQLSLFVGRITPEI-GNCSMLKYISLSNNKLSGPIPR 280
I E + L L L L + + + L+ + L NN + + R
Sbjct: 78 -FISSEAFVPVPNLRYLDLSSN--HLH----TLDEFLFSDLQALEVLLLYNNHIVV-VDR 129
Query: 281 E-LCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELV---LVNNRISGSIPEYISELP-L 335
+ L ++ L N +S ++ L +L+ L +N++ + +LP
Sbjct: 130 NAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAW 189
Query: 336 KVFDLQYNN 344
L +N
Sbjct: 190 VKNGLYLHN 198
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 2e-09
Identities = 31/151 (20%), Positives = 48/151 (31%), Gaps = 38/151 (25%)
Query: 461 IPGSLSRLTNLTTLNLFGNLLTGSIPPE--FGDSLKVQGLYLGHNQLTGSIPESLGYLSG 518
+P SL + L+L N L+ + E + L L HN L I
Sbjct: 33 VPQSLP--SYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLN-FIS-------- 80
Query: 519 NKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPE-LGNLVQLEYLDF 577
+F + L +LDLS N L + +L LE L
Sbjct: 81 -------SEAFVPVPNLRYLDLSSNHLH--------------TLDEFLFSDLQALEVLLL 119
Query: 578 SMNMLDGHIPEK-LCSLPYLLYLNLADNRLE 607
N + + + L L L+ N++
Sbjct: 120 YNNHIV-VVDRNAFEDMAQLQKLYLSQNQIS 149
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 1e-08
Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 35/144 (24%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144
+ +LR LDLS N L L + S+L+ L++L + N + +
Sbjct: 86 PVPNLRYLDLSSNHL-HTLDEFLFSDLQALEVLLLYNNHIV----------------VVD 128
Query: 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR----LGDLTQLQDLDLSDNLLSGSL 200
N+F + QL+ L S N ++ P L +L LDLS N L L
Sbjct: 129 RNAFED--------MAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK-KL 178
Query: 201 PVSLLKNLQSLSYLDVSNNLLSGN 224
P++ L+ L + + L N
Sbjct: 179 PLTDLQKLPAWVKNGLY---LHNN 199
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 2e-15
Identities = 42/271 (15%), Positives = 80/271 (29%), Gaps = 45/271 (16%)
Query: 384 EKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL-- 441
+ +T IP + N L+ I F L +++ N++
Sbjct: 12 RVFLCQESKVTE-IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE 68
Query: 442 -------NGCVVVVYL-LLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE-FGDS 492
+ + + + N L P + L NL L + + +P S
Sbjct: 69 VIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHS 127
Query: 493 LKVQGLYLGHNQLTGSIPES----------LGYLSGNKLYGSVPTSFGNLNGLTHLDLSC 542
L+ L + N +I + + +L+ N + ++F
Sbjct: 128 LQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDN 187
Query: 543 NELDGIVGLYVQSNKFYGEIPPE-LGNLVQLEYLDFSMNMLDGHIPEK-LCSLPYLLYLN 600
N L+ E+P + LD S + +P L +L L +
Sbjct: 188 NNLE--------------ELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARS 232
Query: 601 LADNRLEGEVPRSGICQNLSIISLTGNKDLC 631
+ + ++P L SLT C
Sbjct: 233 TYNLK---KLPTLEKLVALMEASLTYPSHCC 260
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 1e-14
Identities = 49/253 (19%), Positives = 85/253 (33%), Gaps = 24/253 (9%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQ 185
IPS L + L+ ++ S N + I + +L +
Sbjct: 23 EIPS--DLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80
Query: 186 LQDLDLSD-NLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIG 243
L ++ + N L + +NL +L YL +SN + ++P + + L +
Sbjct: 81 LHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDN 138
Query: 244 PYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINL-DGNMLSGTI 302
++ G + L+ N + I N L E+NL D N L
Sbjct: 139 INIHTIERNSFV---GLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELP 194
Query: 303 EDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEF 362
DVF + L + R I LP + N + S +N + L
Sbjct: 195 NDVFHGASGPVILDISRTR--------IHSLPSYGLE----NLKKLRARSTYNLKKLPTL 242
Query: 363 NAASNLLEGSLSW 375
L+E SL++
Sbjct: 243 EKLVALMEASLTY 255
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 1e-13
Identities = 50/265 (18%), Positives = 85/265 (32%), Gaps = 44/265 (16%)
Query: 336 KVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTR 395
+VF Q + T IP L N +E L S LEK+++S N +
Sbjct: 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE 68
Query: 396 QIPKKI-GNLTNIQILKL-NSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLN 453
I + NL + +++ +N I P F + +L L + + +
Sbjct: 69 VIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK----------- 117
Query: 454 NNMLSGKIP-GSLSRLTNLTTLNLFGNLLTGSIPPE--FGDSLKVQGLYLGHNQLTGSIP 510
+P L++ N+ +I G S + L+L N + I
Sbjct: 118 ------HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIH 170
Query: 511 E---------SLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNEL--------DGIVGLYV 553
L N L F +G LD+S + + + L
Sbjct: 171 NSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRA 230
Query: 554 QSNKFYGEIPPELGNLVQLEYLDFS 578
+S ++P L LV L +
Sbjct: 231 RSTYNLKKLPT-LEKLVALMEASLT 254
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 6e-13
Identities = 37/241 (15%), Positives = 77/241 (31%), Gaps = 20/241 (8%)
Query: 88 SSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQ-LGLLTRLETISL-R 144
+ L L + S L+ + + +N + I + L +L I + +
Sbjct: 30 RNAIELRFVLTKL-RVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88
Query: 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRL-GDLTQLQDLDLSDNLLSGSLPVS 203
+N+ P ++ L+ L S G+ +P Q LD+ DN+ ++ +
Sbjct: 89 ANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERN 147
Query: 204 LLKNLQS-LSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEI-GNC 261
L L ++ N + I N +L +L L L + ++
Sbjct: 148 SFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNN-NLE----ELPNDVFHGA 201
Query: 262 SMLKYISLSNNKLSGPIPRELCNS-GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNN 320
S + +S ++ +P + L + ++ L E L
Sbjct: 202 SGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNL----KKLPTLEKLVALMEASLTYP 256
Query: 321 R 321
Sbjct: 257 S 257
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 3e-12
Identities = 35/208 (16%), Positives = 61/208 (29%), Gaps = 24/208 (11%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSV-GENQLSGSIPSQ-LGLLTRLETIS 142
L +++S+N + + V SNL +L + + N L I + L L+ +
Sbjct: 52 GFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLL-YINPEAFQNLPNLQYLL 110
Query: 143 LRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRL--GDLTQLQDLDLSDNLLSGSL 200
+ + Q LD N TI G + L L+ N + +
Sbjct: 111 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EI 169
Query: 201 PVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGP--------------- 244
S Q NN L +P ++ L +
Sbjct: 170 HNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKL 228
Query: 245 YQLSLFVGRITPEIGNCSMLKYISLSNN 272
S + + P + L SL+
Sbjct: 229 RARSTYNLKKLPTLEKLVALMEASLTYP 256
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 2e-15
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 43/216 (19%)
Query: 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAA-EMETLDMVKHQNLVQLLG 724
VIG G F F+ + + VA+KK+ Q D+ F E++ + +VKH N+V L
Sbjct: 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVDLKA 99
Query: 725 Y-CSVGEEKL-----LVYEYM---VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
+ S G++K LV EY+ V + + + + ++ Y R ++++H
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQ-TMPMLLIKLYMYQLLRSLAYIH 158
Query: 776 -HGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY 833
G I H DIK N+LL+ K+ DFG A+++ E +VS Y+ S Y
Sbjct: 159 SIG----ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS--------YICSRY 206
Query: 834 GQAGRANE----------RGDIYSFGVILLELVTGK 859
RA E DI+S G ++ EL+ G+
Sbjct: 207 ---YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 2e-15
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 50/220 (22%)
Query: 666 ENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAA-EMETLDMVKHQNLVQLL 723
VIG G F ++ + VA+KK+ Q D+ F E++ + + H N+V+L
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLR 113
Query: 724 GY-CSVGEEKL-----LVYEYMVNGSLDDWLRNRAAS---LDWGKRCKIAYGAARGISFL 774
+ S GE+K LV +Y+ ++ R+ + + L Y R ++++
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 775 H-HGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARLISDCESHVSTDTADTIGYV--- 829
H G I H DIK N+LL+ D K+ DFG A+ + E +VS Y+
Sbjct: 173 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICSR 220
Query: 830 ----------PSEYGQAGRANERGDIYSFGVILLELVTGK 859
++Y + D++S G +L EL+ G+
Sbjct: 221 YYRAPELIFGATDYTSS------IDVWSAGCVLAELLLGQ 254
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 77.2 bits (191), Expect = 2e-15
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 39/214 (18%)
Query: 667 NVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDRE----FAA--EMETLDMVKHQ 717
+G G + T +KG ++ T VA+K++ D E A E+ + +KH+
Sbjct: 11 EKLGNGTYATVYKGL--NKTTGVYVALKEVKL-----DSEEGTPSTAIREISLMKELKHE 63
Query: 718 NLVQLLGYCSVGEEKL-LVYEYM---VNGSLDD-WLRNRAASLDWGKRCKIAYGAARGIS 772
N+V+L E KL LV+E+M + +D + N L+ + +G++
Sbjct: 64 NIVRLYDVI-HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 773 FLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE 832
F H I+H D+K N+L+N + K+ DFGLAR + + T+ Y +
Sbjct: 123 FCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGI-PVNTFSSEVVTLWYRAPD 178
Query: 833 -------YGQAGRANERGDIYSFGVILLELVTGK 859
Y + DI+S G IL E++TGK
Sbjct: 179 VLMGSRTYSTS------IDIWSCGCILAEMITGK 206
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 3e-15
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 33/209 (15%)
Query: 667 NVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDREFAA----EMETLDMVKHQNL 719
++G G + K ++ T VA+KK + D+ E++ L ++H+NL
Sbjct: 31 GLVGEGSYGMVMKCR--NKDTGRIVAIKKFLE--SDDDKMVKKIAMREIKLLKQLRHENL 86
Query: 720 VQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HG 777
V LL C +++ LV+E++ + ++ D L LD+ K + GI F H H
Sbjct: 87 VNLLEVC-KKKKRWYLVFEFV-DHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE----- 832
IIH DIK NIL++ K+ DFG AR ++ V D T Y E
Sbjct: 145 ----IIHRDIKPENILVSQSGVVKLCDFGFARTLAA-PGEVYDDEVATRWYRAPELLVGD 199
Query: 833 --YGQAGRANERGDIYSFGVILLELVTGK 859
YG+A D+++ G ++ E+ G+
Sbjct: 200 VKYGKA------VDVWAIGCLVTEMFMGE 222
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 3e-15
Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 42/262 (16%)
Query: 161 QLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNL 220
Q + + + IPS L L + L ++P NL ++S + VS ++
Sbjct: 12 QEEDFRVTCKDIQ-RIPSLPPSTQTL---KLIETHLR-TIPSHAFSNLPNISRIYVSIDV 66
Query: 221 LSGNIPPEI-GNLKKLSDLYLGIGPYQLSLFVGRITPEI-GNCSMLKYISLSNNKLSG-P 277
+ NL K++ + + L+ I P+ +LK++ + N L P
Sbjct: 67 TLQQLESHSFYNLSKVTHIEIRNTR-NLT----YIDPDALKELPLLKFLGIFNTGLKMFP 121
Query: 278 IPRELCNSGSLVEINLDGNMLSGTI-EDVFDRCTNLS-ELVLVNNRISGSIPEYI-SELP 334
++ ++ + + N +I + F N + L L NN + S+ Y +
Sbjct: 122 DLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTK 180
Query: 335 LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLT 394
L L N + VI +A + G LD+S +T
Sbjct: 181 LDAVYLNKNKYLTVIDK-----------DAFGGVYSG-----------PSLLDVSQTSVT 218
Query: 395 RQIPKKIGNLTNIQILKLNSNF 416
+P K L +++ L + +
Sbjct: 219 A-LPSKG--LEHLKELIARNTW 237
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 2e-13
Identities = 38/222 (17%), Positives = 76/222 (34%), Gaps = 15/222 (6%)
Query: 114 LKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLN 173
+ V + IPS L +T+ L ++ + + S +
Sbjct: 13 EEDFRVTCKDIQ-RIPS---LPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTL 68
Query: 174 GTIPSRL-GDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE--IG 230
+ S +L+++ +++ + + LK L L +L + N L P +
Sbjct: 69 QQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPDLTKVY 127
Query: 231 NLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVE 290
+ L + PY S+ V G C+ + L NN + + N L
Sbjct: 128 STDIFFILEITDNPYMTSIPVNAFQ---GLCNETLTLKLYNNGFTS-VQGYAFNGTKLDA 183
Query: 291 INLDGNMLSGTI-EDVFDR-CTNLSELVLVNNRISGSIPEYI 330
+ L+ N I +D F + S L + ++ ++P
Sbjct: 184 VYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKG 224
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 2e-12
Identities = 40/255 (15%), Positives = 75/255 (29%), Gaps = 55/255 (21%)
Query: 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNN-- 440
E ++ + +IP + Q LKL I F + +++ + + +
Sbjct: 13 EEDFRVTCKDIQ-RIP---SLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTL 68
Query: 441 -------LNGCVVVVYLLL-NNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE--FG 490
V ++ + N L+ P +L L L L +F L P
Sbjct: 69 QQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPDLTKVY 127
Query: 491 DSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNL-NGLTHLDLSCNELDGIV 549
+ L + N SIP +F L N L L N
Sbjct: 128 STDIFFILEITDNPYMTSIP---------------VNAFQGLCNETLTLKLYNNGF---- 168
Query: 550 GLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPE----KLCSLPYLLYLNLADNR 605
+ N +L+ + + N I + + S L+++
Sbjct: 169 ----------TSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSG--PSLLDVSQTS 216
Query: 606 LEGEVPRSGICQNLS 620
+ +P S ++L
Sbjct: 217 VT-ALP-SKGLEHLK 229
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 3e-12
Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 36/196 (18%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144
NL ++ + +S ++ QL NL ++ + + + I
Sbjct: 53 NLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID--------------- 97
Query: 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIP--SRLGDLTQLQDLDLSDNLLSGSLPV 202
++ + LK L GL P +++ L+++DN S+PV
Sbjct: 98 PDALKE--------LPLLKFLGIFNTGLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPV 148
Query: 203 SLLKNLQSLS-YLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEI--G 259
+ + L + + L + NN + ++ N KL +YL L+ I + G
Sbjct: 149 NAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNK-YLT----VIDKDAFGG 202
Query: 260 NCSMLKYISLSNNKLS 275
S + +S ++
Sbjct: 203 VYSGPSLLDVSQTSVT 218
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 2e-10
Identities = 28/224 (12%), Positives = 62/224 (27%), Gaps = 38/224 (16%)
Query: 427 DCISLNTLDLGSNNL----NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT 482
+C + ++ + L L L + S L N++ + + ++
Sbjct: 9 ECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTL 68
Query: 483 GSIPPE-FGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLS 541
+ F + KV + + + + I P + L L L +
Sbjct: 69 QQLESHSFYNLSKVTHIEIRNTRNLTYID---------------PDALKELPLLKFLGIF 113
Query: 542 CNELDGIVG------------LYVQSNKFYGEIPPEL--GNLVQLEYLDFSMNMLDGHIP 587
L L + N + IP G + L N +
Sbjct: 114 NTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF-TSVQ 172
Query: 588 EKLCSLPYLLYLNLADNRLEGEVPR---SGICQNLSIISLTGNK 628
+ L + L N+ + + G+ S++ ++
Sbjct: 173 GYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTS 216
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 3e-15
Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 35/210 (16%)
Query: 667 NVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDREFAA-----EMETLDMVKHQN 718
IG G + FK ++ T VA+KK ++ D E+ L +KH N
Sbjct: 9 GKIGEGSYGVVFKCR--NRDTGQIVAIKKFLESE---DDPVIKKIALREIRMLKQLKHPN 63
Query: 719 LVQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-H 776
LV LL + +L LV+EY + ++ L + I + + ++F H H
Sbjct: 64 LVNLLEVFR-RKRRLHLVFEYC-DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE---- 832
IH D+K NIL+ + K+ DFG ARL++ S D T Y E
Sbjct: 122 N----CIHRDVKPENILITKHSVIKLCDFGFARLLTG-PSDYYDDEVATRWYRSPELLVG 176
Query: 833 ---YGQAGRANERGDIYSFGVILLELVTGK 859
YG D+++ G + EL++G
Sbjct: 177 DTQYGPP------VDVWAIGCVFAELLSGV 200
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 4e-15
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE----FAA--EMETLDMVKHQNL 719
+ +G G + T +KG VA+K++ + + E A E+ L +KH N+
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEI-----RLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 720 VQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF 778
V L E+ L LV+EY+ + L +L + ++ + RG+++ H
Sbjct: 63 VTLHDII-HTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR-- 118
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE------ 832
++H D+K N+L+N+ E K++DFGLAR S + + T+ Y P +
Sbjct: 119 -QKVLHRDLKPQNLLINERGELKLADFGLARAKSI-PTKTYDNEVVTLWYRPPDILLGST 176
Query: 833 -YGQAGRANERGDIYSFGVILLELVTGK 859
Y D++ G I E+ TG+
Sbjct: 177 DYSTQ------IDMWGVGCIFYEMATGR 198
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 6e-15
Identities = 54/179 (30%), Positives = 69/179 (38%), Gaps = 25/179 (13%)
Query: 387 DLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL----- 441
D L +P I + + L L S + F L L+L N L
Sbjct: 20 DCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76
Query: 442 ---NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQG 497
+ + L L NN L+ G LT L L L GN L S+P D L K++
Sbjct: 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKE 135
Query: 498 LYLGHNQLTGSIPE----SLG-----YLSGNKLYGSVP-TSFGNLNGLTHLDLSCNELD 546
L L NQL SIP L LS N+L SVP +F L L + L N+ D
Sbjct: 136 LRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQL-QSVPHGAFDRLGKLQTITLFGNQFD 192
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 6e-11
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 93 LDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQL-GLLTRLETISLRSNSFTG 150
LDL L LS L +L L++ NQL ++ + + LT L T+ L +N
Sbjct: 40 LDLQSTGL-ATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANNQLA- 96
Query: 151 EMPSELGD-IKQLKSLDFSGNGLNGTIPSRLGD-LTQLQDLDLSDNLLSGSLPVSLLKNL 208
+P + D + QL L GN L ++PS + D LT+L++L L+ N L S+P L
Sbjct: 97 SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKL 154
Query: 209 QSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL 240
+L L +S N L L KL + L
Sbjct: 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITL 186
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 163 KSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222
+ LD GL + LT+L L+L N L +L + +L L L ++NN L+
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANNQLA 96
Query: 223 GNIPPEI-GNLKKLSDLYLGIGPYQL-SLFVG---RITPEIGNCSMLKYISLSNNKLSGP 277
++P + +L +L LYLG QL SL G R+T LK + L+ N+L
Sbjct: 97 -SLPLGVFDHLTQLDKLYLGGN--QLKSLPSGVFDRLT-------KLKELRLNTNQLQS- 145
Query: 278 IPRELCNS-GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNN 320
IP + +L ++L N L FDR L + L N
Sbjct: 146 IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 44/186 (23%), Positives = 68/186 (36%), Gaps = 30/186 (16%)
Query: 269 LSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPE 328
L + L+ L +NLD N L VFD T L L L NN+++ S+P
Sbjct: 42 LQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPL 100
Query: 329 YI--SELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKL 386
+ L L N +P +++ L++L
Sbjct: 101 GVFDHLTQLDKLYLGGNQLKS-LPSGVFDR-----------------------LTKLKEL 136
Query: 387 DLSSNMLTRQIPKKI-GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN-GC 444
L++N L IP LTN+Q L L++N + F L T+ L N +
Sbjct: 137 RLNTNQLQS-IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195
Query: 445 VVVVYL 450
++YL
Sbjct: 196 CEILYL 201
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 45/180 (25%), Positives = 69/180 (38%), Gaps = 46/180 (25%)
Query: 469 TNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPE-------SLG--YLSGN 519
+ L+L L F K+ L L +NQL ++ LG L+ N
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANN 93
Query: 520 KLYGSVPTS-FGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPEL-GNLVQLEYLDF 577
+L S+P F +L L L L N+L +S +P + L +L+ L
Sbjct: 94 QL-ASLPLGVFDHLTQLDKLYLGGNQL--------KS------LPSGVFDRLTKLKELRL 138
Query: 578 SMNMLDGHIPEKLCSLPY--------LLYLNLADNRLEGEVPRSGI--CQNLSIISLTGN 627
+ N +L S+P L L+L+ N+L+ VP L I+L GN
Sbjct: 139 NTN--------QLQSIPAGAFDKLTNLQTLSLSTNQLQS-VPHGAFDRLGKLQTITLFGN 189
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 7e-15
Identities = 28/202 (13%), Positives = 53/202 (26%), Gaps = 46/202 (22%)
Query: 668 VIGGGGFRTAFKGTMPDQK---TVAVKKLSQATGQCDREFAAEM--ETLDM--VKHQNLV 720
GG ++ D VA+ + G + E TL + + +
Sbjct: 38 FHGGVPPLQFWQAL--DTALDRQVALTFVD-PQGVLPDDVLQETLSRTLRLSRIDKPGVA 94
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFK 779
++L L+V E++ GSL + + A H G
Sbjct: 95 RVLDVVHTRAGGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRAG-- 149
Query: 780 PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRA 839
+ S + ++ + ++ A
Sbjct: 150 --VALSIDHPSRVRVSIDGDVVLAYPATMP----------------------------DA 179
Query: 840 NERGDIYSFGVILLELVTGKQP 861
N + DI G L L+ + P
Sbjct: 180 NPQDDIRGIGASLYALLVNRWP 201
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 1e-14
Identities = 57/219 (26%), Positives = 86/219 (39%), Gaps = 45/219 (20%)
Query: 665 FENVIGGGGFRTAFKGTM-PDQKTVAVK--KLSQATGQCDREFAAEMETLDMVKHQNLVQ 721
++G G F K Q+ AVK + A + E+E L + H N+++
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 722 LLGYCSVGEEKLLVY---EYMVNGSLDDWLRNR-------AASLDWGKRCKIAYGAARGI 771
L E+ Y E G L D + R AA +I GI
Sbjct: 86 LFEIL---EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA--------RIIKQVFSGI 134
Query: 772 SFLH-HGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISDCESHVSTDTADTIG 827
+++H H I+H D+K NILL + K+ DFGL+ ++ D T
Sbjct: 135 TYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGTAY 188
Query: 828 YVPSE-----YGQAGRANERGDIYSFGVILLELVTGKQP 861
Y+ E Y E+ D++S GVIL L++G P
Sbjct: 189 YIAPEVLRGTYD------EKCDVWSAGVILYILLSGTPP 221
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 1e-14
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 46/227 (20%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLS--QATGQCDREFAAEMETLDMVKHQNLVQLL 723
+ IG G + ++ VA+KK+S + C R E++ L +H+N++ +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 91
Query: 724 G-YCSVGEEKL----LVYEYMVNGSLDDWLRN--RAASLDWGKRCKIAYGAARGISFLHH 776
+ E++ +V + M + L + L C Y RG+ ++H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYV------- 829
++H D+K SN+LLN + K+ DFGLAR+ H T YV
Sbjct: 147 A---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT----EYVATRWYRA 199
Query: 830 ------PSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
Y ++ DI+S G IL E+++ + P F K
Sbjct: 200 PEIMLNSKGYTKS------IDIWSVGCILAEMLSNR----PIFPGKH 236
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 76.8 bits (189), Expect = 1e-14
Identities = 41/206 (19%), Positives = 77/206 (37%), Gaps = 20/206 (9%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLL 723
+G G F + T A K + E++T+ +++H LV L
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 220
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
E +++YE+M G L + + + + + + +G+ +H + +
Sbjct: 221 DAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYV 277
Query: 784 HMDIKTSNILLNDYFEA--KVSDFGLARLISDCESHVSTDTADTIGYVPSE------YGQ 835
H+D+K NI+ K+ DFGL + + T T + E G
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ--SVKVTTGTAEFAAPEVAEGKPVGY 335
Query: 836 AGRANERGDIYSFGVILLELVTGKQP 861
D++S GV+ L++G P
Sbjct: 336 Y------TDMWSVGVLSYILLSGLSP 355
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 2e-14
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 37/180 (20%)
Query: 707 EMETLDMVKHQNLVQLLGYC---SVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCK 762
E+ L + H N+V+L E+ L +V+E + G + ++
Sbjct: 86 EIAILKKLDHPNVVKL--VEVLDDPNEDHLYMVFELVNQGPV----------MEVPTLKP 133
Query: 763 IAYGAAR--------GISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813
++ AR GI +LH IIH DIK SN+L+ + K++DFG++
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQK----IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 814 CESHVSTDTADTIGYVPSEYGQAGRANERG---DIYSFGVILLELVTGKQPTGPEFEDKD 870
++ +S T T ++ E R G D+++ GV L V G+ P F D+
Sbjct: 190 SDALLSN-TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP----FMDER 244
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 2e-14
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 667 NVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDRE---FAA--EMETLDMVKHQN 718
+ +G G F T +K D+ T VA+KK+ ++ A E++ L + H N
Sbjct: 16 DFLGEGQFATVYKAR--DKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN 73
Query: 719 LVQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
++ LL + + LV+++M L+ +++ + L +G+ +LH
Sbjct: 74 IIGLLD-AFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 131
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE----- 832
+ I+H D+K +N+LL++ K++DFGLA+ + T T Y E
Sbjct: 132 W---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS-PNRAYTHQVVTRWYRAPELLFGA 187
Query: 833 --YGQAGRANERGDIYSFGVILLELVTGK 859
YG D+++ G IL EL+
Sbjct: 188 RMYGVG------VDMWAVGCILAELLLRV 210
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 2e-14
Identities = 57/214 (26%), Positives = 85/214 (39%), Gaps = 24/214 (11%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQA---TGQCDREFAAEMETLDMVKHQNLVQL 722
IG G ++ VA+KKLS+ R + E+ + V H+N++ L
Sbjct: 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 89
Query: 723 L------GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH 776
L ++ +V E M + +L ++ LD + + Y GI LH
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHS 145
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA 836
IIH D+K SNI++ K+ DFGLAR S + T T Y E
Sbjct: 146 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILG 200
Query: 837 GRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
E DI+S G I+ E++ G F D
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKGG----VLFPGTD 230
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 2e-14
Identities = 39/245 (15%), Positives = 88/245 (35%), Gaps = 30/245 (12%)
Query: 154 SELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSY 213
+ + + T +L+ +Q+ + ++ + ++ ++ +L
Sbjct: 13 FPDPGLANAVKQNLGKQSV--TDLVSQKELSGVQNFNGDNSNIQS---LAGMQFFTNLKE 67
Query: 214 LDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT--PEIGNCSMLKYISLSN 271
L +S+N +S ++ P + +L KL +L + R+ I + L + L N
Sbjct: 68 LHLSHNQIS-DLSP-LKDLTKLEELSVN---------RNRLKNLNGIPSAC-LSRLFLDN 115
Query: 272 NKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYIS 331
N+L L + +L +++ N L +I + L L L N I+ + ++
Sbjct: 116 NELRDTDS--LIHLKNLEILSIRNNKLK-SIVM-LGFLSKLEVLDLHGNEIT-NT-GGLT 169
Query: 332 ELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLS-WEISNAVALEKLDLS 389
L + DL + + L N + +S + ISN + +
Sbjct: 170 RLKKVNWIDLTGQK---CVNEPVKYQPELYITNTVKDPDGRWISPYYISNGGSYVDGCVL 226
Query: 390 SNMLT 394
+
Sbjct: 227 WELPV 231
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 1e-13
Identities = 45/288 (15%), Positives = 89/288 (30%), Gaps = 49/288 (17%)
Query: 180 LGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLY 239
L +L ++ + K L + + N+ + ++ + L +L+
Sbjct: 15 DPGLANAVKQNLGKQSVTD---LVSQKELSGVQNFNGDNSNIQ-SLAG-MQFFTNLKELH 69
Query: 240 LGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLS 299
L Q+S ++P + + + L+ +S++ N+L L + LD N L
Sbjct: 70 LSHN--QIS----DLSP-LKDLTKLEELSVNRNRLKNLNGIPSAC---LSRLFLDNNELR 119
Query: 300 GTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSEN 358
+ NL L + NN++ SI + L L+V DL N T
Sbjct: 120 -DTDS-LIHLKNLEILSIRNNKLK-SIVM-LGFLSKLEVLDLHGNEITNTGG-------- 167
Query: 359 LMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFD 418
++ + +DL+ + K L +K +
Sbjct: 168 ------------------LTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRW- 208
Query: 419 GIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLS 466
I P + S + L V + + G+
Sbjct: 209 -ISPYYISNGGSYVDGCV-LWELPVYTDEVSYKFSEYINVGETEAIFD 254
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-13
Identities = 48/251 (19%), Positives = 85/251 (33%), Gaps = 30/251 (11%)
Query: 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISL 143
L++ +L K + L Q L ++ + + + S+ + T L+ + L
Sbjct: 15 DPGLANAVKQNLGKQSV-TDLVSQ-KELSGVQNFNGDNSNIQ-SLAG-MQFFTNLKELHL 70
Query: 144 RSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVS 203
N + S L D+ +L+ L + N L L L L +N L
Sbjct: 71 SHNQIS--DLSPLKDLTKLEELSVNRNRLKNLNG---IPSACLSRLFLDNNELRD---TD 122
Query: 204 LLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSM 263
L +L++L L + NN L +I +G L KL L L + +
Sbjct: 123 SLIHLKNLEILSIRNNKLK-SIVM-LGFLSKLEVLDLH------GNEITNTGG-LTRLKK 173
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSEL-VLVNNRI 322
+ +I L+ K + L N + I +S V+ +
Sbjct: 174 VNWIDLTGQKCVNE---PVKYQPELYITNTVKDPDGRWISP-----YYISNGGSYVDGCV 225
Query: 323 SGSIPEYISEL 333
+P Y E+
Sbjct: 226 LWELPVYTDEV 236
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 7e-13
Identities = 41/230 (17%), Positives = 73/230 (31%), Gaps = 60/230 (26%)
Query: 377 ISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDL 436
K +L +T + L+ +Q +++ + M+ +L L L
Sbjct: 15 DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQSLAGMQ--FFTNLKELHL 70
Query: 437 GSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQ 496
N ++ + L LT L L++ N L ++ S +
Sbjct: 71 SHNQIS-----------------DLSP-LKDLTKLEELSVNRNRLK-NLNG--IPSACLS 109
Query: 497 GLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSN 556
L+L +N+L S +L L L + N+L IV
Sbjct: 110 RLFLDNNELRD------------------TDSLIHLKNLEILSIRNNKLKSIVM------ 145
Query: 557 KFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRL 606
LG L +LE LD N + L L + +++L +
Sbjct: 146 ---------LGFLSKLEVLDLHGNEITNTGG--LTRLKKVNWIDLTGQKC 184
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 35/192 (18%), Positives = 69/192 (35%), Gaps = 26/192 (13%)
Query: 302 IEDVF--DRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSEN 358
I VF N + L ++ + EL ++ F+ +N + + N
Sbjct: 9 INQVFPDPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQSLAGMQ--FFTN 64
Query: 359 LMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNL--TNIQILKLNSNF 416
L E + + N + LS + + LE+L ++ N L + + + L L++N
Sbjct: 65 LKELHLSHNQIS-DLS-PLKDLTKLEELSVNRNRLK-----NLNGIPSACLSRLFLDNNE 117
Query: 417 FDGIIPMEFGDCISLNTLDLGSN------NLNGCVVVVYLLLNNNMLSGKIPGSLSRLTN 470
+L L + +N L + L L+ N ++ L+RL
Sbjct: 118 LRDTDS--LIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNTGG--LTRLKK 173
Query: 471 LTTLNLFGNLLT 482
+ ++L G
Sbjct: 174 VNWIDLTGQKCV 185
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 3e-09
Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 25/228 (10%)
Query: 269 LSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPE 328
++ P + V+ NL ++ + + + N+ I S+
Sbjct: 4 QRPTPINQVFP--DPGLANAVKQNLGKQSVT-DLVS-QKELSGVQNFNGDNSNIQ-SL-A 57
Query: 329 YISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLD 387
+ LK L +N + + P+ + L E + N L+ + + L +L
Sbjct: 58 GMQFFTNLKELHLSHNQISDLSPLK--DLTKLEELSVNRNRLK---NLNGIPSACLSRLF 112
Query: 388 LSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNN------L 441
L +N L + +L N++IL + +N I+ G L LDL N L
Sbjct: 113 LDNNELRD--TDSLIHLKNLEILSIRNNKLKSIVM--LGFLSKLEVLDLHGNEITNTGGL 168
Query: 442 NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEF 489
V ++ L + + L N + I P +
Sbjct: 169 TRLKKVNWIDLTGQKCVNE---PVKYQPELYITNTVKDPDGRWISPYY 213
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 35/187 (18%), Positives = 65/187 (34%), Gaps = 35/187 (18%)
Query: 450 LLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSI 509
+ ++ P L N NL +T + + VQ ++ + S+
Sbjct: 2 SIQRPTPINQVFP--DPGLANAVKQNLGKQSVT-DLVS-QKELSGVQNFNGDNSNIQ-SL 56
Query: 510 P--------ESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGE 561
+ L +LS N++ S + +L L L ++ N L + G+
Sbjct: 57 AGMQFFTNLKEL-HLSHNQI--SDLSPLKDLTKLEELSVNRNRLKNLNGI---------- 103
Query: 562 IPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSI 621
L L N L + L L L L++ +N+L+ + G L +
Sbjct: 104 ------PSACLSRLFLDNNEL--RDTDSLIHLKNLEILSIRNNKLK-SIVMLGFLSKLEV 154
Query: 622 ISLTGNK 628
+ L GN+
Sbjct: 155 LDLHGNE 161
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 10/122 (8%)
Query: 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISL 143
L +L +L IL + N L + + L +L++L + N+++ + L L ++ I L
Sbjct: 124 LIHLKNLEILSIRNNKL-KSIVM-LGFLSKLEVLDLHGNEIT-NT-GGLTRLKKVNWIDL 179
Query: 144 RSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTI--PSRLGDLTQLQDLDLSDNLLSGSLP 201
E ++ ++ +G P + + D + L +
Sbjct: 180 TGQKCVNEPVKYQPELYITNTV----KDPDGRWISPYYISNGGSYVDGCVLWELPVYTDE 235
Query: 202 VS 203
VS
Sbjct: 236 VS 237
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 75.2 bits (184), Expect = 4e-14
Identities = 50/302 (16%), Positives = 96/302 (31%), Gaps = 25/302 (8%)
Query: 1 MAKLLLCLMVFSLSFGTFTAIDEPKQERRSLVHFKNSLQNPQVLSGWNKTTRHCHWFGVK 60
+ + L++ P R + L + + T W G
Sbjct: 267 VGSRMGTLLLMVDEAPLSVEWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSD 326
Query: 61 CRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVG 120
+ V+ L +LS L ++ + K L+ L
Sbjct: 327 SQKECVLLKDRPEC-----WCRDSATDEQLFRCELSVEKST-VLQSELESCKELQELEPE 380
Query: 121 ENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRL 180
+I + L+ L+ + + + D + LD +
Sbjct: 381 NKWCLLTI---ILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLK 437
Query: 181 GDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL 240
+ ++ L L+ L+ + L+ L +++LD+S+N L +PP + L+ L L
Sbjct: 438 MEYADVRVLHLAHKDLTV---LCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQ- 492
Query: 241 GIGPYQLSLFVGRIT--PEIGNCSMLKYISLSNNKLSG-PIPRELCNSGSLVEINLDGNM 297
+ + N L+ + L NN+L + L + LV +NL GN
Sbjct: 493 --------ASDNALENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNS 544
Query: 298 LS 299
L
Sbjct: 545 LC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 73.6 bits (180), Expect = 1e-13
Identities = 50/283 (17%), Positives = 95/283 (33%), Gaps = 43/283 (15%)
Query: 352 SLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILK 411
S +L + L + + + + + ++ L + + + +
Sbjct: 297 SHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRP-ECWCRDSATDEQLFRCE 355
Query: 412 LNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNL 471
L+ ++ E C L L+ + ++++ L+ + + S L +
Sbjct: 356 LSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAV 414
Query: 472 TTLNLFG-----NLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVP 526
+ + + V+ L+L H LT +
Sbjct: 415 DPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT-VLC---------------- 457
Query: 527 TSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHI 586
L +THLDLS N L +PP L L LE L S N L+ ++
Sbjct: 458 -HLEQLLLVTHLDLSHNRLR--------------ALPPALAALRCLEVLQASDNALE-NV 501
Query: 587 PEKLCSLPYLLYLNLADNRLEG--EVPRSGICQNLSIISLTGN 627
+ +LP L L L +NRL+ + C L +++L GN
Sbjct: 502 DG-VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGN 543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 72.5 bits (177), Expect = 3e-13
Identities = 47/269 (17%), Positives = 90/269 (33%), Gaps = 38/269 (14%)
Query: 288 LVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTG 347
L +L+ + T ++ + E VL+ +R + ++ L +L T
Sbjct: 304 LPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVEKST- 362
Query: 348 VIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNI 407
V+ L + + L E + L I AL+ L L + L +
Sbjct: 363 VLQSELESCKELQELEPENKW---CLLTIILLMRALDPLLYEKETL-----QYFSTLKAV 414
Query: 408 QILKL-----NSNFFDGIIPMEFGDCISLNTLDLGSN------NLNGCVVVVYLLLNNNM 456
++ + F + + + L L +L ++V +L L++N
Sbjct: 415 DPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNR 474
Query: 457 LSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL 516
L +P +L+ L L L N L ++ + ++Q L L +N+L
Sbjct: 475 LR-ALPPALAALRCLEVLQASDNALE-NVDG-VANLPRLQELLLCNNRLQ-QSAA----- 525
Query: 517 SGNKLYGSVPTSFGNLNGLTHLDLSCNEL 545
+ L L+L N L
Sbjct: 526 ---------IQPLVSCPRLVLLNLQGNSL 545
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 70.2 bits (171), Expect = 1e-12
Identities = 32/160 (20%), Positives = 62/160 (38%), Gaps = 14/160 (8%)
Query: 84 LFNLSSLRILD--------LSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLL 135
L S+L+ +D ++ + S +++L + L+ + L L
Sbjct: 405 LQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT-VLCH-LEQL 462
Query: 136 TRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNL 195
+ + L N +P L ++ L+ L S N L + + +L +LQ+L L +N
Sbjct: 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG-VANLPRLQELLLCNNR 519
Query: 196 LSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKL 235
L S + L + L L++ N L L ++
Sbjct: 520 LQQSAAIQPLVSCPRLVLLNLQGNSLC-QEEGIQERLAEM 558
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 5e-14
Identities = 54/218 (24%), Positives = 84/218 (38%), Gaps = 27/218 (12%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLS----QATGQCDREFAAEME--TLDMV----KH 716
++G GGF T F G + D+ VA+K + +E L V H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGS-LDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
+++LL + E +LV E + L D++ + L G I H
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP-LGEGPSRCFFGQVVAAIQHCH 156
Query: 776 -HGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY 833
G ++H DIK NIL++ AK+ DFG L+ D T Y P E+
Sbjct: 157 SRG----VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDF---DGTRVYSPPEW 209
Query: 834 GQAGR-ANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
+ ++S G++L ++V G P FE
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIP----FERDQ 243
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 73.3 bits (180), Expect = 5e-14
Identities = 48/259 (18%), Positives = 75/259 (28%), Gaps = 61/259 (23%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVK-----KLSQATGQCDREFAAEMETLDMVKHQN 718
+ IG G + + A+K K+ Q + E+ + + H N
Sbjct: 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPN 89
Query: 719 LVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYG------------ 766
+ +L + LV E G L D L +
Sbjct: 90 IARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149
Query: 767 --------------------AAR-------GISFLH-HGFKPYIIHMDIKTSNILLNDYF 798
+ + +LH G I H DIK N L +
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG----ICHRDIKPENFLFSTNK 205
Query: 799 EA--KVSDFGLARLISDC---ESHVSTDTADTIGYVPSE--YGQAGRANERGDIYSFGVI 851
K+ DFGL++ E + T A T +V E + D +S GV+
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 852 LLELVTGKQPTGPEFEDKD 870
L L+ G P F +
Sbjct: 266 LHLLLMGAVP----FPGVN 280
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 6e-14
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 39/221 (17%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQA---TGQCDREFAAEMETLDMVKHQNLVQL 722
+G G + + + VA+KKLS+ R + E+ L ++H+N++ L
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGL 88
Query: 723 L------GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH 776
L + LV +M L + + K + Y +G+ ++H
Sbjct: 89 LDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMGLK---FSEEKIQYLVYQMLKGLKYIHS 144
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA 836
++H D+K N+ +N+ E K+ DFGLAR D T GYV + + +A
Sbjct: 145 A---GVVHRDLKPGNLAVNEDCELKILDFGLAR---------HADAEMT-GYVVTRWYRA 191
Query: 837 -------GRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
N+ DI+S G I+ E++TGK F+ KD
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK----TLFKGKD 228
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 6e-14
Identities = 57/225 (25%), Positives = 86/225 (38%), Gaps = 46/225 (20%)
Query: 665 FENVIGGGGFRTAFKGTM-PDQKTVAVKKLS-------------QATGQCDREFAAEMET 710
+G G + A+K + + + E E+
Sbjct: 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99
Query: 711 LDMVKHQNLVQLLGYCSVGEEKL---LVYEYMVNGSLDDWLRNR-------AASLDWGKR 760
L + H N+++L E+K LV E+ G L + + NR AA
Sbjct: 100 LKSLDHPNIIKLFDVF---EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA------- 149
Query: 761 CKIAYGAARGISFLH-HGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISDCES 816
I GI +LH H I+H DIK NILL N K+ DFGL+ S +
Sbjct: 150 -NIMKQILSGICYLHKHN----IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS--KD 202
Query: 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
+ D T Y+ E + + NE+ D++S GVI+ L+ G P
Sbjct: 203 YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPP 246
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 73.7 bits (181), Expect = 6e-14
Identities = 49/221 (22%), Positives = 84/221 (38%), Gaps = 46/221 (20%)
Query: 669 IGGGGFRTAFKGTMPDQKT---VAVKKLSQ----ATGQCDREFAAEMETLDMVKHQNLVQ 721
+G G + +K D K A+K++ + E+ L +KH N++
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACR------EIALLRELKHPNVIS 82
Query: 722 LLG-YCSVGEEKL-LVYEYM-------VNGSLDDWLRNRAASLDWGKRCKIAYGAARGIS 772
L + S + K+ L+++Y + + L G + Y GI
Sbjct: 83 LQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142
Query: 773 FLHHGFKPYIIHMDIKTSNILLNDYFEA----KVSDFGLARLISDCESHVSTDTAD---T 825
+LH + ++H D+K +NIL+ K++D G ARL + D T
Sbjct: 143 YLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS-PLKPLADLDPVVVT 198
Query: 826 IGYVPSE-------YGQAGRANERGDIYSFGVILLELVTGK 859
Y E Y +A DI++ G I EL+T +
Sbjct: 199 FWYRAPELLLGARHYTKA------IDIWAIGCIFAELLTSE 233
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 7e-14
Identities = 61/336 (18%), Positives = 108/336 (32%), Gaps = 80/336 (23%)
Query: 138 LETISLRSNSFTGE----MPSELGDIKQLKSLDFSGNGLNGT----IPSRLGDLTQLQDL 189
+E SL+ ++ T E + + L + +K + SGN + + + L+
Sbjct: 6 IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIA 65
Query: 190 DLSDNLLSGSLPVSL---------LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL 240
+ SD L L + +S+N
Sbjct: 66 EFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN--------------------- 104
Query: 241 GIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLS-------------GPIPRELCNSGS 287
GP + + + L+++ L NN L + ++ N+
Sbjct: 105 AFGP----TAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPP 160
Query: 288 LVEINLDGNMLSG----TIEDVFDRCTNLSELVLVNNRI-----SGSIPEYISELP-LKV 337
L I N L F L + +V N I + E ++ LKV
Sbjct: 161 LRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKV 220
Query: 338 FDLQYNNFT--GVIPVS--LWNSENLMEFNAASNLLEGSLSWEISNAVA------LEKLD 387
DLQ N FT G ++ L + NL E LL + + +A + L+ L
Sbjct: 221 LDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLR 280
Query: 388 LSSNMLTRQIPKKIG-----NLTNIQILKLNSNFFD 418
L N + + + + ++ L+LN N F
Sbjct: 281 LQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 4e-11
Identities = 52/380 (13%), Positives = 104/380 (27%), Gaps = 94/380 (24%)
Query: 162 LKSLDFSGNGLNG----TIPSRLGDLTQLQDLDLSDNLLS--GSLPVS-LLKNLQSLSYL 214
++ + + ++ + L + ++++ LS N + + +S + + + L
Sbjct: 6 IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIA 65
Query: 215 DVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKL 274
+ S+ L+ L + C L + LS+N
Sbjct: 66 EFSDIFTGRVKDEIPEALRLLLQ-------------------ALLKCPKLHTVRLSDNAF 106
Query: 275 SG----PIPRELCNSGSLVEINLDGNMLS-------------GTIEDVFDRCTNLSELVL 317
P+ L L + L N L + L ++
Sbjct: 107 GPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIIC 166
Query: 318 VNNRISGSIPEYISEL-----PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGS 372
NR+ + ++ L + N +LL
Sbjct: 167 GRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE---------------GIEHLLLEG 211
Query: 373 LSWEISNAVALEKLDLSSNMLT----RQIPKKIGNLTNIQILKLNSNFF--DGIIP---- 422
L + L+ LDL N T + + + N++ L LN G
Sbjct: 212 L----AYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDA 267
Query: 423 MEFGDCISLNTLDLGSNNLN--GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNL 480
+ I L TL L N + + ++ +L L L GN
Sbjct: 268 FSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKM-------------PDLLFLELNGNR 314
Query: 481 LT--GSIPPEFGDSLKVQGL 498
+ + E + +G
Sbjct: 315 FSEEDDVVDEIREVFSTRGR 334
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 7e-11
Identities = 55/350 (15%), Positives = 100/350 (28%), Gaps = 92/350 (26%)
Query: 247 LSLFVGRITPE--------IGNCSMLKYISLSNNKLSGP----IPRELCNSGSLVEINLD 294
SL + IT E + +K I LS N + + + + L
Sbjct: 9 KSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS 68
Query: 295 GNMLSGTIEDVFD----------RCTNLSELVLVNNRISGSIPEYISEL-----PLKVFD 339
+++ + +C L + L +N + E + + PL+
Sbjct: 69 DIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLY 128
Query: 340 LQYNNFT--GVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLT--- 394
L N + A L E +++ + NA L + N L
Sbjct: 129 LHNNGLGPQAGAKI-------------ARALQELAVNKKAKNAPPLRSIICGRNRLENGS 175
Query: 395 -RQIPKKIGNLTNIQILKLNSNFF--DGI---IPMEFGDCISLNTLDLGSNNL--NGCVV 446
++ K + + +K+ N +GI + C L LDL N G
Sbjct: 176 MKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSA 235
Query: 447 VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQG------LYL 500
+ L + NL L L LL+ D+ L L
Sbjct: 236 LAIALKSW--------------PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRL 281
Query: 501 GHNQLTG----SIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELD 546
+N++ ++ + + L L+L+ N
Sbjct: 282 QYNEIELDAVRTLKTVID---------------EKMPDLLFLELNGNRFS 316
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 4e-09
Identities = 44/289 (15%), Positives = 83/289 (28%), Gaps = 52/289 (17%)
Query: 383 LEKLDLSSNMLT----RQIPKKIGNLTNIQILKLNSNFF--DGI--IPMEFGDCISLNTL 434
+E L + +T + + + +++ + L+ N + + L
Sbjct: 6 IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIA 65
Query: 435 DLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLK 494
+ + L + +L + L T+ L N + D L
Sbjct: 66 EFSDIFTGRVKDEIPEALRL------LLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLS 119
Query: 495 V----QGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELD---- 546
+ LYL +N L P++ ++ +V N L + N L+
Sbjct: 120 KHTPLEHLYLHNNGLG---PQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSM 176
Query: 547 -----------GIVGLYVQSNKFYGE-----IPPELGNLVQLEYLDFSMNML--DG--HI 586
+ + + N E + L +L+ LD N G +
Sbjct: 177 KEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSAL 236
Query: 587 PEKLCSLPYLLYLNLADNRLE-------GEVPRSGICQNLSIISLTGNK 628
L S P L L L D L + L + L N+
Sbjct: 237 AIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE 285
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 1e-07
Identities = 47/265 (17%), Positives = 80/265 (30%), Gaps = 47/265 (17%)
Query: 84 LFNLSSLRILDLSKNLL----FGQLSPQVSNLKRLKMLSVGENQLS-------------G 126
L L + LS N L +S L+ L + N L
Sbjct: 90 LLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQEL 149
Query: 127 SIPSQLGLLTRLETISLRSNSFTGE----MPSELGDIKQLKSLDFSGNGLN-----GTIP 177
++ + L +I N + L ++ NG+ +
Sbjct: 150 AVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLL 209
Query: 178 SRLGDLTQLQDLDLSDNLLS--GSLPVS-LLKNLQSLSYLDVSNNLLSGNIPPEIGNL-- 232
L +L+ LDL DN + GS ++ LK+ +L L +++ LLS + +
Sbjct: 210 EGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFS 269
Query: 233 ----KKLSDLYLG---IGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLS--GPIPRELC 283
L L L I + I L ++ L+ N+ S + E+
Sbjct: 270 KLENIGLQTLRLQYNEIELDAVRTLKTVID---EKMPDLLFLELNGNRFSEEDDVVDEIR 326
Query: 284 ----NSGSLVEINLDGNMLSGTIED 304
G LD E+
Sbjct: 327 EVFSTRGRGELDELDDMEELTDEEE 351
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 3e-07
Identities = 47/305 (15%), Positives = 99/305 (32%), Gaps = 71/305 (23%)
Query: 377 ISNAVALEKLDLSSNMLT----RQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLN 432
+ +++++ LS N + R + + I + +++I + + F + L
Sbjct: 28 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLL- 86
Query: 433 TLDLGSNNLNGCVVVVYLLLNNNMLSGK----IPGSLSRLTNLTTLNLFGN--------- 479
L C + + L++N + LS+ T L L L N
Sbjct: 87 -----LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAK 141
Query: 480 ----LLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGL 535
L ++ + ++ ++ + G N+L S+ + +F + L
Sbjct: 142 IARALQELAVNKKAKNAPPLRSIICGRNRLE---NGSMKEWA---------KTFQSHRLL 189
Query: 536 THLDLSCNEL--DGIVG--------------LYVQSNKFYGE----IPPELGNLVQLEYL 575
+ + N + +GI L +Q N F + L + L L
Sbjct: 190 HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 249
Query: 576 DFSMNMLDG----HIPE--KLCSLPYLLYLNLADNRLEGEVPRS------GICQNLSIIS 623
+ +L + + L L L N +E + R+ +L +
Sbjct: 250 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLE 309
Query: 624 LTGNK 628
L GN+
Sbjct: 310 LNGNR 314
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 6e-06
Identities = 37/198 (18%), Positives = 61/198 (30%), Gaps = 36/198 (18%)
Query: 79 PVSPFLFNLSSLRILDLSKN-------------LLFGQLSPQVSNLKRLKMLSVGENQLS 125
P+ FL + L L L N L ++ + N L+ + G N+L
Sbjct: 113 PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172
Query: 126 G----SIPSQLGLLTRLETISLRSNSFTGEMPSE-----LGDIKQLKSLDFSGNGLNGT- 175
L T+ + N E L ++LK LD N
Sbjct: 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG 232
Query: 176 ---IPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQ-----SLSYLDVSNNLLSGNIPP 227
+ L L++L L+D LLS +++ L L + N + +
Sbjct: 233 SSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVR 292
Query: 228 EIG-----NLKKLSDLYL 240
+ + L L L
Sbjct: 293 TLKTVIDEKMPDLLFLEL 310
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 9e-14
Identities = 46/207 (22%), Positives = 76/207 (36%), Gaps = 30/207 (14%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVK-----KLSQATGQCDREFAAEMETLDMVKHQN 718
VIG G F + + AVK K + + G + E M+KH +
Sbjct: 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 719 LVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDW---GKRCKIAYGAARGISFLH 775
+V+LL S +V+E+M L + RA + + + H
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTADTIGYV-P 830
+ IIH D+K +LL + K+ FG+A + + V+ T ++ P
Sbjct: 148 DNN----IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE-SGLVAGGRVGTPHFMAP 202
Query: 831 -----SEYGQAGRANERGDIYSFGVIL 852
YG+ D++ GVIL
Sbjct: 203 EVVKREPYGKP------VDVWGCGVIL 223
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 1e-13
Identities = 56/232 (24%), Positives = 90/232 (38%), Gaps = 41/232 (17%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLL 723
F V+G G F F K A+K + ++ D E+ L +KH+N+V L
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNR------AASLDWGKRCKIAYGAARGISFLH-H 776
LV + + G L D + R AS + + +LH +
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS-------LVIQQVLSAVKYLHEN 125
Query: 777 GFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTADTIGYVPSE- 832
G I+H D+K N+L E ++DFGL+++ + + + T GYV E
Sbjct: 126 G----IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN---GIMSTACGTPGYVAPEV 178
Query: 833 -----YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
Y +A D +S GVI L+ G P F ++ L + +
Sbjct: 179 LAQKPYSKA------VDCWSIGVITYILLCGYPP----FYEETESKLFEKIK 220
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 1e-13
Identities = 44/232 (18%), Positives = 73/232 (31%), Gaps = 51/232 (21%)
Query: 668 VIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQC-------DREFAA----EMETLDMVKH 716
I G + G + VA+K++ D E+ L+ H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 717 QNLVQLLG-YCSVGEEKL----LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGI 771
N++ L + E + LV E M L + ++ + Y G+
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 772 SFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYV-- 829
LH ++H D+ NILL D + + DF LAR + D T YV
Sbjct: 148 HVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAR-------EDTADANKT-HYVTH 196
Query: 830 -----------PSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
+ + D++S G ++ E+ K F
Sbjct: 197 RWYRAPELVMQFKGFTKL------VDMWSAGCVMAEMFNRK----ALFRGST 238
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 73.0 bits (179), Expect = 1e-13
Identities = 60/216 (27%), Positives = 85/216 (39%), Gaps = 28/216 (12%)
Query: 667 NVIGGGGFRTAFKGTMPDQKT---VAVKKLSQA---TGQCDREFAAEMETLDMVKHQNLV 720
IG G D VA+KKLS+ R + E+ + V H+N++
Sbjct: 68 KPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNII 124
Query: 721 QLL------GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
LL ++ LV E M + +L ++ LD + + Y GI L
Sbjct: 125 SLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 180
Query: 775 HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834
H IIH D+K SNI++ K+ DFGLAR S + T T Y E
Sbjct: 181 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVI 235
Query: 835 QAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
E DI+S G I+ E+V K F +D
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRD 267
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 1e-13
Identities = 50/221 (22%), Positives = 83/221 (37%), Gaps = 30/221 (13%)
Query: 664 VFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQ 721
+F+ +G G F +K +++ Q E AE+E L + H N+++
Sbjct: 25 IFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDW---GKRCKIAYGAARGISFLH-HG 777
+ +V E G L + + + A G ++ +++ H
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 144
Query: 778 FKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTADTIGYVPSE-- 832
++H D+K NIL D K+ DFGLA L ST+ A T Y+ E
Sbjct: 145 ----VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK--SDEHSTNAAGTALYMAPEVF 198
Query: 833 ---YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
+ DI+S GV++ L+TG P F
Sbjct: 199 KRDVT------FKCDIWSAGVVMYFLLTGCLP----FTGTS 229
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 1e-13
Identities = 41/206 (19%), Positives = 76/206 (36%), Gaps = 20/206 (9%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLL 723
+G G F + + K ++ E+ ++ + H L+ L
Sbjct: 55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLH 114
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
E +L+ E++ G L D + + + A G+ +H + I+
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIV 171
Query: 784 HMDIKTSNILLNDYFEA--KVSDFGLARLISDCESHVSTDTADTIGYVPSE------YGQ 835
H+DIK NI+ + K+ DFGLA ++ E + T T + E G
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--IVKVTTATAEFAAPEIVDREPVGF 229
Query: 836 AGRANERGDIYSFGVILLELVTGKQP 861
D+++ GV+ L++G P
Sbjct: 230 Y------TDMWAIGVLGYVLLSGLSP 249
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 2e-13
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 45/221 (20%)
Query: 667 NVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDRE-----FAA--EMETLDMVKH 716
IG G F FK +KT VA+KK+ + E A E++ L ++KH
Sbjct: 23 AKIGQGTFGEVFKAR--HRKTGQKVALKKV-----LMENEKEGFPITALREIKILQLLKH 75
Query: 717 QNLVQLLGYCSVGEEKL--------LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAA 768
+N+V L+ C LV+++ + L L N + ++
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 769 RGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD-TAD--T 825
G+ ++H I+H D+K +N+L+ K++DFGLAR S ++ T T
Sbjct: 135 NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVT 191
Query: 826 IGYVPSE-------YGQAGRANERGDIYSFGVILLELVTGK 859
+ Y P E YG D++ G I+ E+ T
Sbjct: 192 LWYRPPELLLGERDYGPP------IDLWGAGCIMAEMWTRS 226
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 2e-13
Identities = 55/231 (23%), Positives = 84/231 (36%), Gaps = 39/231 (16%)
Query: 325 SIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE 384
P+ +L+ + T + + NS + + A ++ ++ I +
Sbjct: 12 IFPDDAF-AETIKANLKKKSVTDAVTQNELNS--IDQIIANNSDIKSVQG--IQYLPNVR 66
Query: 385 KLDLSSNMLTRQIPKKIG---NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL 441
L L N L I LTN+ L L N + F +L L L N L
Sbjct: 67 YLALGGNKLH-----DISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQL 121
Query: 442 --------NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL 493
+ + YL L +N L G +LTNLT L+L N L S+P D L
Sbjct: 122 QSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKL 180
Query: 494 -KVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCN 543
+++ L L NQL S+P+ F L L ++ L N
Sbjct: 181 TQLKDLRLYQNQLK-SVPDG---------------VFDRLTSLQYIWLHDN 215
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 1e-11
Identities = 56/207 (27%), Positives = 78/207 (37%), Gaps = 43/207 (20%)
Query: 384 EKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL-- 441
K +L +T + L +I + N++ + ++ L LG N L
Sbjct: 22 IKANLKKKSVT-DAVTQNE-LNSIDQIIANNSDIKSVQG--IQYLPNVRYLALGGNKLHD 77
Query: 442 ----NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQ 496
+ YL+L N L G +LTNL L L N L S+P D L +
Sbjct: 78 ISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLT 136
Query: 497 GLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSN 556
L L HNQL S+P+ + F L LT LDLS N+L QS
Sbjct: 137 YLNLAHNQLQ-SLPKGV---------------FDKLTNLTELDLSYNQL--------QS- 171
Query: 557 KFYGEIPPEL-GNLVQLEYLDFSMNML 582
+P + L QL+ L N L
Sbjct: 172 -----LPEGVFDKLTQLKDLRLYQNQL 193
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 56/244 (22%), Positives = 93/244 (38%), Gaps = 68/244 (27%)
Query: 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGL---LTRL 138
L+S+ + + + + + + L ++ L++G N+L + LT L
Sbjct: 35 VTQNELNSIDQIIANNSDI--KSVQGIQYLPNVRYLALGGNKLH-----DISALKELTNL 87
Query: 139 ETISLRSNSFTGEMPSELGD-IKQLKSLDFSGNGLNGTIPSRLGD-LTQLQDLDLSDNLL 196
+ L N +P+ + D + LK L N L ++P + D LT L L+L+ N L
Sbjct: 88 TYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQL 145
Query: 197 SGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITP 256
SLP + L +L+ LD+S N L ++P G KL+ L
Sbjct: 146 Q-SLPKGVFDKLTNLTELDLSYNQLQ-SLPE--GVFDKLTQL------------------ 183
Query: 257 EIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELV 316
K + L N+L +P VFDR T+L +
Sbjct: 184 --------KDLRLYQNQLKS-VPDG-----------------------VFDRLTSLQYIW 211
Query: 317 LVNN 320
L +N
Sbjct: 212 LHDN 215
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 17/203 (8%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQL 186
P +L+ S T + ++ + + + + + + ++ + L +
Sbjct: 12 IFPD--DAFAETIKANLKKKSVT-DAVTQNE-LNSIDQIIANNSDIK-SVQG-IQYLPNV 65
Query: 187 QDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGPY 245
+ L L N L + LK L +L+YL ++ N L ++P + L L +L L
Sbjct: 66 RYLALGGNKLH-DISA--LKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVEN-- 119
Query: 246 QLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDV 305
QL + ++ N L Y++L++N+L +L E++L N L E V
Sbjct: 120 QLQSLPDGVFDKLTN---LTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGV 176
Query: 306 FDRCTNLSELVLVNNRISGSIPE 328
FD+ T L +L L N++ S+P+
Sbjct: 177 FDKLTQLKDLRLYQNQLK-SVPD 198
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 2e-13
Identities = 48/215 (22%), Positives = 81/215 (37%), Gaps = 41/215 (19%)
Query: 667 NVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDRE---FAA--EMETLDMVKHQN 718
+G G + +K D T VA+K++ + E A E+ L ++H+N
Sbjct: 40 TKLGEGTYGEVYKAI--DTVTNETVAIKRIRLEH---EEEGVPGTAIREVSLLKELQHRN 94
Query: 719 LVQLLGYCSVGEEKL-LVYEYMVNGSLD-DWLRNRAASLDWGKRCKIAYGAARGISFLHH 776
+++L +L L++EY D ++ + Y G++F H
Sbjct: 95 IIELKSVI-HHNHRLHLIFEYA---ENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS 150
Query: 777 GFKPYIIHMDIKTSNILLNDYFEA-----KVSDFGLARLISDCESHVSTDTADTIGYVPS 831
+H D+K N+LL+ + K+ DFGLAR T T+ Y P
Sbjct: 151 ---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI-PIRQFTHEIITLWYRPP 206
Query: 832 E-------YGQAGRANERGDIYSFGVILLELVTGK 859
E Y + DI+S I E++
Sbjct: 207 EILLGSRHYSTS------VDIWSIACIWAEMLMKT 235
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 2e-13
Identities = 58/234 (24%), Positives = 93/234 (39%), Gaps = 43/234 (18%)
Query: 665 FENVIGGGGFRTAFKGTM-PDQKTVAVKKL--SQATGQCDREFAAEMETLDMVKHQNLVQ 721
++G G F K Q+ AVK + + A + E+E L + H N+++
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNR-------AASLDWGKRCKIAYGAARGISFL 774
L +V E G L D + R AA + K + I+++
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI-----IKQVFSG---ITYM 137
Query: 775 H-HGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTADTIGYVP 830
H H I+H D+K NILL + K+ DFGL+ ++ D T Y+
Sbjct: 138 HKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGTAYYIA 191
Query: 831 SE-----YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
E Y E+ D++S GVIL L++G P F K+ +++ V
Sbjct: 192 PEVLRGTYD------EKCDVWSAGVILYILLSGTPP----FYGKNEYDILKRVE 235
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 3e-13
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVK-----KLSQAT-----GQCDREFAAEMETLDMVKH 716
++G GGF + + G + D VA+K ++S + E + L V
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME----VVLLKKVSS 105
Query: 717 Q--NLVQLLGYCSVGEEKLLVYEYMVN-GSLDDWLRNRAASLDWGKRCKIAYGAARGISF 773
+++LL + + +L+ E L D++ R A L + +
Sbjct: 106 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRH 164
Query: 774 LH-HGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPS 831
H G ++H DIK NIL++ + E K+ DFG L+ D + + T Y P
Sbjct: 165 CHNCG----VLHRDIKDENILIDLNRGELKLIDFGSGALLKD--TVYTD-FDGTRVYSPP 217
Query: 832 EYGQAGR-ANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
E+ + R ++S G++L ++V G P FE +
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP----FEHDE 253
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 3e-13
Identities = 51/222 (22%), Positives = 77/222 (34%), Gaps = 45/222 (20%)
Query: 665 FENVIGGGGFRTAFKGTMPDQKT---VAVK-----KLSQATGQCDRE-FAAEMETLDMVK 715
+G G F K ++ T A K + + RE E+ L V
Sbjct: 16 IGEELGSGQFAIVKKCR--EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSL------DDWLRNRAASLDWGKRCKIAYGAAR 769
H N++ L + +L+ E + G L + L A+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQILD 126
Query: 770 GISFLHHGFKPYIIHMDIKTSNILL----NDYFEAKVSDFGLARLISDCESHVSTDTADT 825
G+++LH I H D+K NI+L K+ DFGLA I D + T
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGT 181
Query: 826 IGYVPSE------YGQAGRANERGDIYSFGVILLELVTGKQP 861
+V E G D++S GVI L++G P
Sbjct: 182 PEFVAPEIVNYEPLGLE------ADMWSIGVITYILLSGASP 217
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 4e-13
Identities = 48/232 (20%), Positives = 81/232 (34%), Gaps = 41/232 (17%)
Query: 665 FENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLL 723
EN IG G + + A KK+ + + F E+E + + H N+++L
Sbjct: 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNR-------AASLDWGKRCKIAYGAARGISFLH- 775
+ LV E G L + + ++ AA + K A +++ H
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARI-----MKDVLSA---VAYCHK 124
Query: 776 HGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE 832
+ H D+K N L + K+ DFGLA + T YV +
Sbjct: 125 LN----VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP--GKMMRTKVGTPYYVSPQ 178
Query: 833 -----YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
YG D +S GV++ L+ G P F ++ +
Sbjct: 179 VLEGLYG------PECDEWSAGVMMYVLLCGYPP----FSAPTDSEVMLKIR 220
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 5e-13
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 38/221 (17%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQA---TGQCDREFAAEMETLDMVKHQNLVQL 722
+G G + VA+KKL + R + E+ L ++H+N++ L
Sbjct: 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIGL 89
Query: 723 L------GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH 776
L + LV +M L +++ L + + Y +G+ ++H
Sbjct: 90 LDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHA 146
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA 836
IIH D+K N+ +N+ E K+ DFGLAR + GYV + + +A
Sbjct: 147 A---GIIHRDLKPGNLAVNEDCELKILDFGLARQADS----------EMTGYVVTRWYRA 193
Query: 837 -------GRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
R + DI+S G I+ E++TGK F+ D
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGK----TLFKGSD 230
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 9e-13
Identities = 33/173 (19%), Positives = 63/173 (36%), Gaps = 36/173 (20%)
Query: 387 DLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPM-EFGDCISLNTLDLGSNNLNGCV 445
D S+ L + IP+ I L+LN+N F + F L ++ +N +
Sbjct: 17 DCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT--- 70
Query: 446 VVVYLLLNNNMLSGKIP-GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQGLYLGHN 503
I G+ + + + L N L ++ + L ++ L L N
Sbjct: 71 --------------DIEEGAFEGASGVNEILLTSNRLE-NVQHKMFKGLESLKTLMLRSN 115
Query: 504 QLTGSIPESLG---------YLSGNKLYGSVPT-SFGNLNGLTHLDLSCNELD 546
++T + L N++ +V +F L+ L+ L+L N +
Sbjct: 116 RIT-CVGNDSFIGLSSVRLLSLYDNQI-TTVAPGAFDTLHSLSTLNLLANPFN 166
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 2e-08
Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 6/135 (4%)
Query: 88 SSLRILDLSKNLLFGQLSPQV--SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
L L+ N L L +L+ ++ N+++ + + I L S
Sbjct: 32 QYTAELRLNNNEF-TVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-LTQLQDLDLSDNLLSGSLPVSL 204
N ++ LK+L N + + + L+ ++ L L DN ++ ++
Sbjct: 91 NRLENVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQIT-TVAPGA 148
Query: 205 LKNLQSLSYLDVSNN 219
L SLS L++ N
Sbjct: 149 FDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 4e-08
Identities = 32/167 (19%), Positives = 64/167 (38%), Gaps = 35/167 (20%)
Query: 163 KSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222
++D S LN IP + +L L++N + + K L L ++ SNN ++
Sbjct: 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT 70
Query: 223 GNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPREL 282
+I G + S + I L++N+L + ++
Sbjct: 71 -DIEE--GAFEGASG--------------------------VNEILLTSNRLEN-VQHKM 100
Query: 283 CNS-GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPE 328
SL + L N ++ D F +++ L L +N+I+ ++
Sbjct: 101 FKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT-TVAP 146
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 7e-07
Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 50/175 (28%)
Query: 267 ISLSNNKLSG-PIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGS 325
+ L+NN+ + L +IN N ++ E F+ + ++E++L +NR
Sbjct: 37 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNR---- 92
Query: 326 IPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEK 385
+ + K+F +L+
Sbjct: 93 ----LENVQHKMFK---------------------------------------GLESLKT 109
Query: 386 LDLSSNMLTRQIPKKI-GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439
L L SN +T + L+++++L L N + P F SL+TL+L +N
Sbjct: 110 LMLRSNRITC-VGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 29/156 (18%), Positives = 49/156 (31%), Gaps = 49/156 (31%)
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323
L+ I+ SNNK++ + + EI L N L +F +L L+L +NR
Sbjct: 59 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR-- 116
Query: 324 GSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVAL 383
I+ + F L ++
Sbjct: 117 ------ITCVGNDSFI------------------GL---------------------SSV 131
Query: 384 EKLDLSSNMLTRQIPKKI-GNLTNIQILKLNSNFFD 418
L L N +T + L ++ L L +N F+
Sbjct: 132 RLLSLYDNQITT-VAPGAFDTLHSLSTLNLLANPFN 166
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 5e-04
Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 27/145 (18%)
Query: 515 YLSGNKLYGSVPT-SFGNLNGLTHLDLSCNELDGI-----------VGLYVQSNKFYGEI 562
L+ N+ T F L L ++ S N++ I + + SN+ +
Sbjct: 38 RLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRL-ENV 96
Query: 563 PPEL-GNLVQLEYLDFSMNMLDGHIPEKL-CSLPYLLYLNLADNRLEGEVPRSGICQNL- 619
++ L L+ L N + + L + L+L DN++ V G L
Sbjct: 97 QHKMFKGLESLKTLMLRSNRI-TCVGNDSFIGLSSVRLLSLYDNQIT-TVAP-GAFDTLH 153
Query: 620 --SIISLTGNKDLCEKIMGSDCQIL 642
S ++L N C +C +
Sbjct: 154 SLSTLNLLANPFNC------NCYLA 172
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 9e-13
Identities = 51/222 (22%), Positives = 77/222 (34%), Gaps = 45/222 (20%)
Query: 665 FENVIGGGGFRTAFKGTMPDQKT---VAVK-----KLSQATGQCDRE-FAAEMETLDMVK 715
+G G F K ++ T A K + + RE E+ L V
Sbjct: 16 IGEELGSGQFAIVKKCR--EKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSL------DDWLRNRAASLDWGKRCKIAYGAAR 769
H N++ L + +L+ E + G L + L A+
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-------SFIKQILD 126
Query: 770 GISFLHHGFKPYIIHMDIKTSNILL----NDYFEAKVSDFGLARLISDCESHVSTDTADT 825
G+++LH I H D+K NI+L K+ DFGLA I D + T
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGT 181
Query: 826 IGYVPSE------YGQAGRANERGDIYSFGVILLELVTGKQP 861
+V E G D++S GVI L++G P
Sbjct: 182 PEFVAPEIVNYEPLGLE------ADMWSIGVITYILLSGASP 217
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 9e-13
Identities = 48/208 (23%), Positives = 79/208 (37%), Gaps = 43/208 (20%)
Query: 665 FENVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ 721
+ IG G + + + T AVK + ++ E + L +H N++
Sbjct: 26 VKEDIGVGSYSVCKRCI--HKATNMEFAVKIIDKSKRDPTEEIEI-L--LRYGQHPNIIT 80
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRN------RAASLDWGKRCKIAYGAARGISFLH 775
L G+ +V E M G L D + R AS + + + + +LH
Sbjct: 81 LKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREAS-------AVLFTITKTVEYLH 133
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEA----KVSDFGLARLISDCESHVSTDTADTIGYV- 829
G ++H D+K SNIL D ++ DFG A+ + E+ + T +V
Sbjct: 134 AQG----VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA-ENGLLMTPCYTANFVA 188
Query: 830 -----PSEYGQAGRANERGDIYSFGVIL 852
Y A DI+S GV+L
Sbjct: 189 PEVLERQGYDAA------CDIWSLGVLL 210
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 2e-12
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 39/217 (17%)
Query: 667 NVIGGGGFRTAFKGTMPDQKT---VAVKKL---SQATGQCD------REFAAEMETLDMV 714
IG G + T +K D + VA+K + + G RE A L+
Sbjct: 15 AEIGVGAYGTVYKAR--DPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR-LEAF 71
Query: 715 KHQNLVQLL----GYCSVGEEKL-LVYEYMVNGSLDDWLRNRAA-SLDWGKRCKIAYGAA 768
+H N+V+L+ + E K+ LV+E++ + L +L L +
Sbjct: 72 EHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 769 RGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGY 828
RG+ FLH I+H D+K NIL+ K++DFGLAR+ S + T T+ Y
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--TPVVVTLWY 185
Query: 829 VP------SEYGQAGRANERGDIYSFGVILLELVTGK 859
S Y D++S G I E+ K
Sbjct: 186 RAPEVLLQSTYATP------VDMWSVGCIFAEMFRRK 216
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 2e-12
Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 43/241 (17%)
Query: 662 IIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNL 719
+ + + +G G F K + AVK +S+ ++ E+ L + + H N+
Sbjct: 12 LDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNI 68
Query: 720 VQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR------AASLDWGKRCKIAYGAARGISF 773
V+L LV E + G L + ++ + AS I +S
Sbjct: 69 VKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEAS-------YIMRKLVSAVSH 121
Query: 774 LH-HGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTADTIGYV 829
+H G ++H D+K N+L D + K+ DFG ARL ++ T+ Y
Sbjct: 122 MHDVG----VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCFTLHYA 176
Query: 830 ------PSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMK 883
+ Y E D++S GVIL +++G+ P F+ D + +MK
Sbjct: 177 APELLNQNGYD------ESCDLWSLGVILYTMLSGQVP----FQSHDRSLTCTSAVEIMK 226
Query: 884 K 884
K
Sbjct: 227 K 227
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 2e-12
Identities = 53/223 (23%), Positives = 80/223 (35%), Gaps = 47/223 (21%)
Query: 665 FENVIGGGGFRTAFKGTMPDQKT---VAVK-----KLSQATGQCDRE-FAAEMETLDMVK 715
+G G F K + T A K +LS + RE E+ L ++
Sbjct: 9 MGEELGSGQFAIVRKCR--QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR-------AASLDWGKRCKIAYGAA 768
H N++ L + +L+ E + G L D+L + A K
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF-----LKQ---IL 118
Query: 769 RGISFLHHGFKPYIIHMDIKTSNILLNDYFEA----KVSDFGLARLISDCESHVSTDTAD 824
G+ +LH I H D+K NI+L D K+ DFG+A I +
Sbjct: 119 DGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFG 173
Query: 825 TIGYVPSE------YGQAGRANERGDIYSFGVILLELVTGKQP 861
T +V E G D++S GVI L++G P
Sbjct: 174 TPEFVAPEIVNYEPLGLE------ADMWSIGVITYILLSGASP 210
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 3e-12
Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 39/208 (18%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLS-QATGQCDRE-FAAEMETLDMVKHQNLVQ 721
+G G F + + + A ++ + D + E ++KH N+V+
Sbjct: 15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVR 74
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNR-------AASLDWGKRCKIAYGAARGISFL 774
L S L+++ + G L + + R A+ + A +
Sbjct: 75 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHC-----IQQILEA---VLHC 126
Query: 775 H-HGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTADTIGYV- 829
H G ++H ++K N+LL + K++DFGLA + E A T GY+
Sbjct: 127 HQMG----VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG-EQQAWFGFAGTPGYLS 181
Query: 830 P-----SEYGQAGRANERGDIYSFGVIL 852
P YG+ D+++ GVIL
Sbjct: 182 PEVLRKDPYGKP------VDLWACGVIL 203
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 3e-12
Identities = 38/168 (22%), Positives = 59/168 (35%), Gaps = 31/168 (18%)
Query: 389 SSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVV 448
LT IP + I ++L N I P F L +DL
Sbjct: 19 RGKGLTE-IPTNL--PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDL------------ 63
Query: 449 YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQGLYLGHNQLTG 507
+NN +S P + L +L +L L+GN +T +P + L +Q L L N++
Sbjct: 64 ----SNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKIN- 117
Query: 508 SIPESLG---------YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELD 546
+ L NKL +F L + + L+ N
Sbjct: 118 CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 3e-11
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 10/129 (7%)
Query: 384 EKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL-- 441
++ L N + P ++ + L++N + P F SLN+L L N +
Sbjct: 35 TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE 94
Query: 442 ------NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-K 494
G + LLLN N ++ + L NL L+L+ N L +I L
Sbjct: 95 LPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGTFSPLRA 153
Query: 495 VQGLYLGHN 503
+Q ++L N
Sbjct: 154 IQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 4e-09
Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 34/160 (21%)
Query: 163 KSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222
+ N + P +L+ +DLS+N +S L + L+SL+ L + N ++
Sbjct: 35 TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYGNKIT 93
Query: 223 GNIPPEI-GNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRE 281
+P + L L L L+ NK++ + +
Sbjct: 94 -ELPKSLFEGLFSLQLLL-----------------------------LNANKINC-LRVD 122
Query: 282 LCNS-GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNN 320
+L ++L N L + F + + L N
Sbjct: 123 AFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 4e-09
Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 29/136 (21%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQL-GLLTRLETISL 143
LR +DLS N + +L+P L+ L L + N+++ +P L L L+ + L
Sbjct: 54 PYKKLRRIDLSNNQI-SELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLL 111
Query: 144 RSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVS 203
+N ++ L DL L L L DN L ++
Sbjct: 112 NAN--------------KINCLR----------VDAFQDLHNLNLLSLYDNKLQ-TIAKG 146
Query: 204 LLKNLQSLSYLDVSNN 219
L+++ + ++ N
Sbjct: 147 TFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 2e-08
Identities = 35/176 (19%), Positives = 56/176 (31%), Gaps = 49/176 (27%)
Query: 265 KYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISG 324
I L N + P L I+L N +S D F +L+ LVL N+
Sbjct: 35 TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK--- 91
Query: 325 SIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE 384
I+ELP +F+ +L+
Sbjct: 92 -----ITELPKSLFE---------------------------------------GLFSLQ 107
Query: 385 KLDLSSNMLTRQIPKKI-GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439
L L++N + + +L N+ +L L N I F ++ T+ L N
Sbjct: 108 LLLLNANKINC-LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 36/174 (20%), Positives = 60/174 (34%), Gaps = 42/174 (24%)
Query: 484 SIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCN 543
IP + + L N + IP P +F L +DLS N
Sbjct: 25 EIPTNL--PETITEIRLEQNTIK-VIP---------------PGAFSPYKKLRRIDLSNN 66
Query: 544 EL--------DGIV---GLYVQSNKFYGEIPPEL-GNLVQLEYLDFSMNMLDGHIPEKL- 590
++ G+ L + NK E+P L L L+ L + N + +
Sbjct: 67 QISELAPDAFQGLRSLNSLVLYGNKI-TELPKSLFEGLFSLQLLLLNANKI-NCLRVDAF 124
Query: 591 CSLPYLLYLNLADNRLEGEVPRSGI--CQNLSIISLTGNKDLCEKIMGSDCQIL 642
L L L+L DN+L+ + + + + + L N +C DC +
Sbjct: 125 QDLHNLNLLSLYDNKLQ-TIAKGTFSPLRAIQTMHLAQNPFIC------DCHLK 171
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 3e-12
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 24/205 (11%)
Query: 668 VIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
++GGG F K + T +A K + + E E+ ++ + H NL+QL
Sbjct: 96 ILGGGRFGQVHKCE--ETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIH 784
+ +LV EY+ G L D + + + +L GI +H + YI+H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILH 210
Query: 785 MDIKTSNILLNDYFEA--KVSDFGLARLISDCESHVSTDTADTIGYVPSE------YGQA 836
+D+K NIL + K+ DFGLAR E T ++ E
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KLKVNFGTPEFLAPEVVNYDFVSFP 268
Query: 837 GRANERGDIYSFGVILLELVTGKQP 861
D++S GVI L++G P
Sbjct: 269 ------TDMWSVGVIAYMLLSGLSP 287
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 3e-12
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 27/218 (12%)
Query: 665 FENVIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMVKHQ 717
F ++G G F T T + A+K L + + + E + + + H
Sbjct: 34 FGKILGEGSFSTVVLARELAT---SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 718 NLVQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGA--ARGISFL 774
V+L + +EKL Y NG L ++R + S D + Y A + +L
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFD-ETCTRF-YTAEIVSALEYL 146
Query: 775 H-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGYVPSE 832
H G IIH D+K NILLN+ +++DFG A+++S ++ T YV E
Sbjct: 147 HGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 202
Query: 833 YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
A + D+++ G I+ +LV G P F +
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGN 236
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 4e-12
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 40/222 (18%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQA---TGQCDREFAAEMETLDMVKHQNLVQL 722
+ +G G + + VAVKKLS+ R + E+ L +KH+N++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 93
Query: 723 L------GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCK-IAYGAARGISFLH 775
L + LV M L++ ++ + + D + + Y RG+ ++H
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDD---HVQFLIYQILRGLKYIH 149
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQ 835
IIH D+K SN+ +N+ E K+ DFGLAR T T GYV + + +
Sbjct: 150 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTADEMT-GYVATRWYR 196
Query: 836 A-------GRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
A N+ DI+S G I+ EL+TG+ F D
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTD 234
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 4e-12
Identities = 50/235 (21%), Positives = 84/235 (35%), Gaps = 55/235 (23%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLS-QATGQCDREFAAEMETLDMVKHQNLVQLL-- 723
+G GG F K VA+KK+ E++ + + H N+V++
Sbjct: 18 PLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALR-EIKIIRRLDHDNIVKVFEI 76
Query: 724 --------GYCSVGEEKL----LVYEYMVNGSLDDWLRN--RAASLDWGKRCKIAYGAAR 769
+L +V EYM + L N L Y R
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYM-----ETDLANVLEQGPLLEEHARLFMYQLLR 131
Query: 770 GISFLHHGFKPYIIHMDIKTSNILLNDYF-EAKVSDFGLARLISDCESHVSTDTADTIGY 828
G+ ++H ++H D+K +N+ +N K+ DFGLAR++ SH +
Sbjct: 132 GLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS----EG 184
Query: 829 V-------------PSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
+ P+ Y +A D+++ G I E++TGK F
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKA------IDMWAAGCIFAEMLTGK----TLFAGAH 229
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 5e-12
Identities = 35/164 (21%), Positives = 63/164 (38%), Gaps = 17/164 (10%)
Query: 663 IVFENVIGGGGFRTAFKGT------MPDQKTVAVKKLSQATGQCDR-EFAAEMETLDMV- 714
+ +G G F + +TVAVK L + + +E++ L +
Sbjct: 24 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 83
Query: 715 KHQNLVQLLGYCS-VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISF 773
H N+V LLG C+ G +++ E+ G+L +LR++ R + +G F
Sbjct: 84 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK--------RNEFVPYKTKGARF 135
Query: 774 LHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817
I +D+K + + S F + +SD E
Sbjct: 136 RQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 56.5 bits (136), Expect = 1e-08
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 762 KIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821
++ A+G+ FL IH D+ NILL++ K+ DFGLAR I +V
Sbjct: 197 CYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK- 252
Query: 822 TADTIGYVP-----SEYGQAGRANERGDIYSFGVILLELVT-GKQP 861
+P E + D++SFGV+L E+ + G P
Sbjct: 253 ---GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 5e-12
Identities = 51/235 (21%), Positives = 92/235 (39%), Gaps = 44/235 (18%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKL--SQATGQCDREFAAEMETLDMVKHQNLVQ 721
+ +G G F + A K + + + + ++ E ++H N+V+
Sbjct: 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVR 92
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNR-------AASLDWGKRCKIAYGAARGISFL 774
L LV++ + G L + + R A+ + + I++
Sbjct: 93 LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC-----IQQILES---IAYC 144
Query: 775 H-HGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTADTIGYV- 829
H +G I+H ++K N+LL + K++DFGLA ++ +S A T GY+
Sbjct: 145 HSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN--DSEAWHGFAGTPGYLS 198
Query: 830 P-----SEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
P Y + DI++ GVIL L+ G P F D+D L +
Sbjct: 199 PEVLKKDPYSKP------VDIWACGVILYILLVGYPP----FWDEDQHRLYAQIK 243
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 5e-12
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 43/228 (18%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLS--QATGQCDREFAAEMETLDMVKHQNLVQLLG 724
++G G + T P + VA+KK+ R E++ L KH+N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENIITIFN 76
Query: 725 -YCSVGEEKL----LVYEYMVNGSLDDWLRNRAASLDWGKRCK-IAYGAARGISFLHHGF 778
E ++ E M L + + S D + Y R + LH
Sbjct: 77 IQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDD---HIQYFIYQTLRAVKVLHGS- 131
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI---GYV------ 829
+IH D+K SN+L+N + KV DFGLAR+I + + S T +V
Sbjct: 132 --NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 830 -------PSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
++Y +A D++S G IL EL + P F +D
Sbjct: 190 APEVMLTSAKYSRA------MDVWSCGCILAELFLRR----PIFPGRD 227
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 6e-12
Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 41/217 (18%)
Query: 667 NVIGGGGFRTAFKG--TMPDQKTVAVKKL----------SQATGQCDREFAAEMETLDMV 714
IG G + FK + VA+K++ RE A L+
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTI----REVAVLRH-LETF 71
Query: 715 KHQNLVQLL----GYCSVGEEKL-LVYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAA 768
+H N+V+L + E KL LV+E++ + L +L + + +
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 769 RGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGY 828
RG+ FLH ++H D+K NIL+ + K++DFGLAR+ S T T+ Y
Sbjct: 131 RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWY 185
Query: 829 VP------SEYGQAGRANERGDIYSFGVILLELVTGK 859
S Y D++S G I E+ K
Sbjct: 186 RAPEVLLQSSYATP------VDLWSVGCIFAEMFRRK 216
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 7e-12
Identities = 41/208 (19%), Positives = 80/208 (38%), Gaps = 25/208 (12%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAA-EMETLDMVKHQNLVQL 722
+G G F + +KT K + D+ E+ L++ +H+N++ L
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT--DQVLVKKEISILNIARHRNILHL 66
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HGFKPY 781
EE ++++E++ + + + A L+ + + + FLH H
Sbjct: 67 HESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---- 122
Query: 782 IIHMDIKTSNILLNDYFEA--KVSDFGLARLISDCESHVSTDTADTIGYVPSE------Y 833
I H DI+ NI+ + K+ +FG AR + ++ Y E
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF--RLLFTAPEYYAPEVHQHDVV 180
Query: 834 GQAGRANERGDIYSFGVILLELVTGKQP 861
A D++S G ++ L++G P
Sbjct: 181 STA------TDMWSLGTLVYVLLSGINP 202
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 8e-12
Identities = 50/222 (22%), Positives = 78/222 (35%), Gaps = 45/222 (20%)
Query: 665 FENVIGGGGFRTAFKGTMPDQKT---VAVK-----KLSQATGQCDRE-FAAEMETLDMVK 715
+G G F K ++ T A K + + RE E+ L ++
Sbjct: 15 TGEELGSGQFAVVKKCR--EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSL------DDWLRNRAASLDWGKRCKIAYGAAR 769
H N++ L + +L+ E + G L + L A+ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-------EFLKQILN 125
Query: 770 GISFLHHGFKPYIIHMDIKTSNILLNDYFEA----KVSDFGLARLISDCESHVSTDTADT 825
G+ +LH I H D+K NI+L D K+ DFGLA I + T
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGT 180
Query: 826 IGYVPSE------YGQAGRANERGDIYSFGVILLELVTGKQP 861
+V E G D++S GVI L++G P
Sbjct: 181 PEFVAPEIVNYEPLGLE------ADMWSIGVITYILLSGASP 216
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 9e-12
Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 40/213 (18%)
Query: 666 ENVIGGGGF---RTAF-KGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLV 720
E+V+G G +T T + AVK + + G E+E L + H+N++
Sbjct: 18 EDVLGEGAHARVQTCINLIT---SQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVL 74
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR------AASLDWGKRCKIAYGAARGISFL 774
+L+ + + LV+E M GS+ + R AS + A + FL
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-------VVVQDVASALDFL 127
Query: 775 H-HGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTAD------ 824
H G I H D+K NIL + K+ DF L I T +
Sbjct: 128 HNKG----IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCG 183
Query: 825 TIGYV-P----SEYGQAGRANERGDIYSFGVIL 852
+ Y+ P + +A ++R D++S GVIL
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 9e-12
Identities = 48/212 (22%), Positives = 76/212 (35%), Gaps = 37/212 (17%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVK-----KLSQATGQCDRE----FAAEMETLDMV 714
+ ++G G + P K AVK + + +E E++ L V
Sbjct: 21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 80
Query: 715 K-HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR------AASLDWGKRCKIAYGA 767
H N++QL LV++ M G L D+L + KI
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-------KIMRAL 133
Query: 768 ARGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI 826
I LH I+H D+K NILL+D K++DFG + + + T
Sbjct: 134 LEVICALHKLN----IVHRDLKPENILLDDDMNIKLTDFGFSCQLD--PGEKLREVCGTP 187
Query: 827 GYV------PSEYGQAGRANERGDIYSFGVIL 852
Y+ S + D++S GVI+
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 1e-11
Identities = 38/110 (34%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 449 YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQGLYLGHNQLTG 507
L L++N ++ PG L NL L L N L ++P DSL ++ L LG NQLT
Sbjct: 44 ILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLT- 101
Query: 508 SIPE----SLG-----YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGI 548
+P L ++ NKL +P L LTHL L N+L I
Sbjct: 102 VLPSAVFDRLVHLKELFMCCNKL-TELPRGIERLTHLTHLALDQNQLKSI 150
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 2e-11
Identities = 49/167 (29%), Positives = 67/167 (40%), Gaps = 32/167 (19%)
Query: 387 DLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVV 446
D S +P I TN QIL L+ N + P F I+L
Sbjct: 25 DCRSKRHA-SVPAGI--PTNAQILYLHDNQITKLEPGVFDSLINLK-------------- 67
Query: 447 VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQGLYLGHNQL 505
L L +N L G LT LT L+L N LT +P D L ++ L++ N+L
Sbjct: 68 --ELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKL 124
Query: 506 TGSIPE--------SLGYLSGNKLYGSVPT-SFGNLNGLTHLDLSCN 543
T +P + L N+L S+P +F L+ LTH L N
Sbjct: 125 T-ELPRGIERLTHLTHLALDQNQL-KSIPHGAFDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 3e-08
Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 36/155 (23%)
Query: 91 RILDLSKNLLFGQLSPQV-SNLKRLKMLSVGENQLSGSIPSQLGL---LTRLETISLRSN 146
+IL L N + +L P V +L LK L +G NQL ++P G+ LT+L + L +N
Sbjct: 43 QILYLHDNQI-TKLEPGVFDSLINLKELYLGSNQLG-ALPV--GVFDSLTQLTVLDLGTN 98
Query: 147 SFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-LTQLQDLDLSDNLLSGSLPVSLL 205
QL L PS + D L L++L + N L+ LP +
Sbjct: 99 --------------QLTVL-----------PSAVFDRLVHLKELFMCCNKLT-ELPRGIE 132
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL 240
+ L L++L + N L L L+ YL
Sbjct: 133 R-LTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYL 166
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 15/149 (10%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-LTQ 185
S+P+ G+ T + + L N T P + LK L N L +P + D LTQ
Sbjct: 33 SVPA--GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQ 89
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPY 245
L LDL N L+ LP ++ L L L + N L+ +P I L L+ L L
Sbjct: 90 LTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQN-- 145
Query: 246 QLSLFVGRITPEIG--NCSMLKYISLSNN 272
QL + P S L + L N
Sbjct: 146 QL-----KSIPHGAFDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 41/175 (23%), Positives = 62/175 (35%), Gaps = 48/175 (27%)
Query: 265 KYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISG 324
+ + L +N+++ P + +L E+ L N L VFD T L+ L L N+
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ--- 99
Query: 325 SIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE 384
++ LP VFD L V L+
Sbjct: 100 -----LTVLPSAVFD------------RL---------------------------VHLK 115
Query: 385 KLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439
+L + N LT +P+ I LT++ L L+ N I F SL L N
Sbjct: 116 ELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 5e-07
Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 33/159 (20%)
Query: 163 KSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222
+ L N + P L L++L L N L +LPV + +L L+ LD+ N L+
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLT 101
Query: 223 GNIPPEI-GNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRE 281
+P + L L +L+ + NKL+ +PR
Sbjct: 102 -VLPSAVFDRLVHLKELF-----------------------------MCCNKLTE-LPRG 130
Query: 282 LCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNN 320
+ L + LD N L FDR ++L+ L N
Sbjct: 131 IERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 8e-06
Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 32/147 (21%)
Query: 469 TNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPE-------SLG--YLSGN 519
TN L L N +T P F + ++ LYLG NQL ++P L L N
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTN 98
Query: 520 KLYGSVPTS-FGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFS 578
+L +P++ F L L L + CN+L +P + L L +L
Sbjct: 99 QL-TVLPSAVFDRLVHLKELFMCCNKL--------TE------LPRGIERLTHLTHLALD 143
Query: 579 MNMLDGHIPE----KLCSLPYL-LYLN 600
N L IP +L SL + L+ N
Sbjct: 144 QNQLKS-IPHGAFDRLSSLTHAYLFGN 169
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 1e-11
Identities = 48/225 (21%), Positives = 78/225 (34%), Gaps = 74/225 (32%)
Query: 688 VAVK--------KLSQATGQCDREFAAEMETLDMVKHQNLVQL---------------LG 724
AVK ++ +E ++ L ++H+N++QL +
Sbjct: 33 RAVKILKKKKLRRIPNGEANVKKE----IQLLRRLRHKNVIQLVDVLYNEEKQKMYMVME 88
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR--------GISFLH- 775
YC G +++L + + A G+ +LH
Sbjct: 89 YCVCGMQEML--DSVPEKRFPVC-------------------QAHGYFCQLIDGLEYLHS 127
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI----GYVPS 831
G I+H DIK N+LL K+S G+A + + DT T + P
Sbjct: 128 QG----IVHKDIKPGNLLLTTGGTLKISALGVAEAL---HPFAADDTCRTSQGSPAFQPP 180
Query: 832 E--YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNL 874
E G + + DI+S GV L + TG P FE + L
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYP----FEGDNIYKL 221
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 2e-11
Identities = 50/211 (23%), Positives = 79/211 (37%), Gaps = 36/211 (17%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVK-------KLSQATGQCDRE-FAAEMETLDMVK 715
++VIG G + AVK +LS + RE E L V
Sbjct: 98 PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA 157
Query: 716 -HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRN------RAASLDWGKRCKIAYGAA 768
H +++ L+ LV++ M G L D+L + I
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR-------SIMRSLL 210
Query: 769 RGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIG 827
+SFLH + I+H D+K NILL+D + ++SDFG + + + T G
Sbjct: 211 EAVSFLHANN----IVHRDLKPENILLDDNMQIRLSDFGFSCHLE--PGEKLRELCGTPG 264
Query: 828 YV------PSEYGQAGRANERGDIYSFGVIL 852
Y+ S + D+++ GVIL
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 2e-11
Identities = 51/235 (21%), Positives = 92/235 (39%), Gaps = 44/235 (18%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKL--SQATGQCDREFAAEMETLDMVKHQNLVQ 721
+ +G G F + A K + + + + ++ E ++H N+V+
Sbjct: 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVR 69
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWLRNR-------AASLDWGKRCKIAYGAARGISFL 774
L LV++ + G L + + R A+ + + I++
Sbjct: 70 LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC-----IQQILES---IAYC 121
Query: 775 H-HGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTADTIGYV- 829
H +G I+H ++K N+LL + K++DFGLA ++ +S A T GY+
Sbjct: 122 HSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN--DSEAWHGFAGTPGYLS 175
Query: 830 P-----SEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
P Y + DI++ GVIL L+ G P F D+D L +
Sbjct: 176 PEVLKKDPYSKP------VDIWACGVILYILLVGYPP----FWDEDQHRLYAQIK 220
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 2e-11
Identities = 48/214 (22%), Positives = 81/214 (37%), Gaps = 26/214 (12%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVK-----KLSQATGQCDREFAA---EMETLDMVK 715
+G G K VA++ K + + + E+E L +
Sbjct: 139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 198
Query: 716 HQNLVQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
H ++++ + E +V E M G L D + L Y + +L
Sbjct: 199 HPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYL 255
Query: 775 H-HGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTADTIGYVP 830
H +G IIH D+K N+LL+ E K++DFG ++++ E+ + T Y+
Sbjct: 256 HENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYLA 309
Query: 831 SE---YGQAGRANERGDIYSFGVILLELVTGKQP 861
E N D +S GVIL ++G P
Sbjct: 310 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 3e-11
Identities = 62/407 (15%), Positives = 127/407 (31%), Gaps = 40/407 (9%)
Query: 44 LSGWNK-TTRHCHWFGVKCRHSRVVSL---VIQTQSLKGPVSPFLFNLSSLRILDLS--- 96
L + TT CR + + + + K + + +SL +L+
Sbjct: 145 LDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKW-LHELAQHNTSLEVLNFYMTE 203
Query: 97 -KNLLFGQLSPQVSNLKRLKMLSVGENQLS--GSIPSQLGLLTRLETISLRSNSFTGEMP 153
+ L N + L + VG+ ++ L SL + E
Sbjct: 204 FAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKY 263
Query: 154 SELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSY 213
L ++L L S G N +P Q++ LDL LL +L++ +L
Sbjct: 264 MNLVFPRKLCRLGLSYMGPNE-MPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEV 322
Query: 214 LDVSNNLLSGNIPPEIGNLKKLSDLYLG--IGPYQLSLFVGRITPE-----IGNCSMLKY 266
L+ N + + K+L L + + G ++ C L+Y
Sbjct: 323 LETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEY 382
Query: 267 ISLSNNKLS----GPIPRELCNSGSLVEINLDGNM------LSGTIEDVFDRCTNLSELV 316
+++ + ++ I L N + LD L + + C L
Sbjct: 383 MAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFA 442
Query: 317 LVNN--RISGSIPEYISELP--LKVFDLQYNNFT--GVIPVSLWNSENLMEFN-AASNLL 369
++ YI + ++ L Y + G++ NL +
Sbjct: 443 FYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEF-SRGCPNLQKLEMRGCCFS 501
Query: 370 EGSLSWEISNAVALEKLDLSSNMLTRQIPKKIG---NLTNIQILKLN 413
E +++ ++ +L L + + + NI+++
Sbjct: 502 ERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 8e-07
Identities = 57/431 (13%), Positives = 131/431 (30%), Gaps = 81/431 (18%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLG-LLTRLETISLR 144
+ + + DL + L + +L+ LK+ + + + +++T+ +
Sbjct: 118 HFRRMIVSDLDLDRLAKARAD---DLETLKLDKC--SGFTTDGLLSIVTHCRKIKTLLME 172
Query: 145 SNSFTGEMPSELGDI----KQLKSLDFSGNGLNGTIPSRLGDLTQ----LQDLDLSD-NL 195
+SF+ + L ++ L+ L+F P L + + L + + D +
Sbjct: 173 ESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEI 232
Query: 196 LSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL-GIGPYQLSLFVGRI 254
L NL+ ++ ++ + +KL L L +GP ++ +
Sbjct: 233 LELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFP-- 290
Query: 255 TPEIGNCSMLKYISLSNNKLSGPIPREL-CNSGSLVEINLDGNMLSGTIEDVFDRCTNLS 313
+ ++ + L L L +L + + +E + C L
Sbjct: 291 -----FAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLK 345
Query: 314 ELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSL 373
L + + + + + G+I ++
Sbjct: 346 RLRIERGADEQGMEDEEGLV----------SQRGLIALA--------------------- 374
Query: 374 SWEISNAVALEKLDLSSNMLT----RQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG--- 426
LE + + + +T I + NL + +++ L+ +P++ G
Sbjct: 375 ----QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRS 430
Query: 427 ---DCISLNTLDLGSNNLN-----------GCVVVVYLLLNNNMLSGKIPGSLSR-LTNL 471
C L V ++LL S + SR NL
Sbjct: 431 LLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNL 490
Query: 472 TTLNLFGNLLT 482
L + G +
Sbjct: 491 QKLEMRGCCFS 501
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 3e-11
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 35/143 (24%)
Query: 405 TNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGS 464
++ L L+ N F ++P E + L +DL +N ++ LS S
Sbjct: 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-------------TLS---NQS 73
Query: 465 LSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQGLYLGHNQLTGSIPESLGYLSGNKLYG 523
S +T L TL L N L IPP D L ++ L L N ++ +PE
Sbjct: 74 FSNMTQLLTLILSYNRLR-CIPPRTFDGLKSLRLLSLHGNDIS-VVPEG----------- 120
Query: 524 SVPTSFGNLNGLTHLDLSCNELD 546
+F +L+ L+HL + N L
Sbjct: 121 ----AFNDLSALSHLAIGANPLY 139
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 2e-09
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-LTQ 185
+P G+ + + L N FT P EL + K L +D S N ++ T+ ++ +TQ
Sbjct: 24 VLPK--GIPRDVTELYLDGNQFTLV-PKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQ 79
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGP 244
L L LS N L +P L+SL L + N +S +P +L LS L +G P
Sbjct: 80 LLTLILSYNRLR-CIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANP 137
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 8e-05
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 269 LSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPE 328
L N+ + +P+EL N L I+L N +S F T L L+L NR
Sbjct: 38 LDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR------- 89
Query: 329 YISELPLKVFD 339
+ +P + FD
Sbjct: 90 -LRCIPPRTFD 99
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 4e-11
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 38/235 (16%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMVKHQNLV 720
V+G GGF + T K A KKL + + + A E + L+ V + +V
Sbjct: 191 VLGKGGFGEVCACQVRAT---GKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVV 247
Query: 721 QLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGA--ARGISFLHHG 777
L Y ++ L LV M G L + + + R Y A G+ LH
Sbjct: 248 SL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF-YAAEICCGLEDLH-- 303
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGYVPSE---- 832
+ I++ D+K NILL+D+ ++SD GLA + + + + T+GY+ E
Sbjct: 304 -RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKN 359
Query: 833 --YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMKKE 885
Y + D ++ G +L E++ G+ P F+ + + V ++K+
Sbjct: 360 ERYTFS------PDWWALGCLLYEMIAGQSP----FQQRKKKIKREEVERLVKEV 404
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 7e-11
Identities = 47/223 (21%), Positives = 78/223 (34%), Gaps = 47/223 (21%)
Query: 664 VFENVIGGGGFRTAFKGTMPDQKT---VAVK--KLSQATGQCDREFAAEMETLDMVKHQ- 717
+ +G G F + + T A K K + C E E+ L++ K
Sbjct: 32 LTSKELGRGKFAVVRQCI--SKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP 89
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYG---AAR----- 769
++ L E +L+ EY G + A R
Sbjct: 90 RVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAE---------MVSENDVIRLIKQI 140
Query: 770 --GISFLHHGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTAD 824
G+ +LH + I+H+D+K NILL+ + K+ DFG++R I +
Sbjct: 141 LEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL--REIMG 195
Query: 825 TIGYVPSE------YGQAGRANERGDIYSFGVILLELVTGKQP 861
T Y+ E A D+++ G+I L+T P
Sbjct: 196 TPEYLAPEILNYDPITTA------TDMWNIGIIAYMLLTHTSP 232
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 7e-11
Identities = 56/214 (26%), Positives = 81/214 (37%), Gaps = 27/214 (12%)
Query: 669 IGGGGF---RTAFKGTMPDQKTVAVK-----KLSQATGQCDREFAA---EMETLDMVKHQ 717
+G G F TA K V VK K+ + D + E+ L V+H
Sbjct: 32 LGSGAFGFVWTAVD--KEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGS-LDDWLRNRAASLDWGKRCKIAYGAARGISFLHH 776
N++++L LV E +G L ++ LD I + +L
Sbjct: 90 NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRL 148
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE--YG 834
IIH DIK NI++ + F K+ DFG A + T TI Y E G
Sbjct: 149 K---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER-GKLFYT-FCGTIEYCAPEVLMG 203
Query: 835 QAGRANERGDIYSFGVILLELVTGKQPTGPEFED 868
R E +++S GV L LV + P F +
Sbjct: 204 NPYRGPEL-EMWSLGVTLYTLVFEENP----FCE 232
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 9e-11
Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 37/202 (18%)
Query: 685 QKTVAVK-----KLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739
++ VAVK + +E + M+ H+N+V+ G+ G + L EY
Sbjct: 32 EEAVAVKIVDMKRAVDCPENIKKE----ICINKMLNHENVVKFYGHRREGNIQYLFLEYC 87
Query: 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAAR--------GISFLH-HGFKPYIIHMDIKTS 790
G L D + + A+ G+ +LH G I H DIK
Sbjct: 88 SGGELFDRIEPDI---------GMPEPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPE 134
Query: 791 NILLNDYFEAKVSDFGLARLISDCESHVSTDTA-DTIGYVPSE-YGQAGRANERGDIYSF 848
N+LL++ K+SDFGLA + + T+ YV E + E D++S
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 849 GVILLELVTGKQPTGPEFEDKD 870
G++L ++ G+ P ++
Sbjct: 195 GIVLTAMLAGELP----WDQPS 212
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 1e-10
Identities = 46/205 (22%), Positives = 78/205 (38%), Gaps = 38/205 (18%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLL 723
E+ +G G ++ QK A+K L + + E+ L + H N+++L
Sbjct: 57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR--TEIGVLLRLSHPNIIKLK 114
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRN------RAASLDWGKRCKIAYGAARGISFLH-H 776
E LV E + G L D + R A+ +++LH +
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA-------DAVKQILEAVAYLHEN 167
Query: 777 GFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTADTIGYVPSE- 832
G I+H D+K N+L K++DFGL++++ + T GY E
Sbjct: 168 G----IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE--HQVLMKTVCGTPGYCAPEI 221
Query: 833 -----YGQAGRANERGDIYSFGVIL 852
YG D++S G+I
Sbjct: 222 LRGCAYGPE------VDMWSVGIIT 240
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 1e-10
Identities = 45/166 (27%), Positives = 61/166 (36%), Gaps = 29/166 (17%)
Query: 387 DLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL----- 441
+ S T +P I L L +N + F + SL L LG N L
Sbjct: 13 ECYSQGRT-SVPTGIP--AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPN 69
Query: 442 ---NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQG 497
N + YL L+ N L G +LT L L L N L S+P D L +++
Sbjct: 70 GVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKD 128
Query: 498 LYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCN 543
L L NQL S+P+ F L L ++ L N
Sbjct: 129 LRLYQNQLK-SVPDG---------------VFDRLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 3e-08
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 31/156 (19%)
Query: 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQL-GLLTRLETISLRSN 146
+ LDL N L + L L L +G N+L S+P+ + LT L ++L +N
Sbjct: 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTN 86
Query: 147 SFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-LTQLQDLDLSDNLLSGSLPVSLL 205
QL+SL P+ + D LTQL++L L+ N L SLP +
Sbjct: 87 --------------QLQSL-----------PNGVFDKLTQLKELALNTNQLQ-SLPDGVF 120
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYL 240
L L L + N L ++P + L L ++L
Sbjct: 121 DKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWL 155
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 7e-05
Identities = 39/176 (22%), Positives = 59/176 (33%), Gaps = 49/176 (27%)
Query: 265 KYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISG 324
Y+ L N L SL ++ L GN L VF++ T+L+ L L N+
Sbjct: 31 TYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ--- 87
Query: 325 SIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE 384
+ LP VFD L L+
Sbjct: 88 -----LQSLPNGVFD------------KL---------------------------TQLK 103
Query: 385 KLDLSSNMLTRQIPKKI-GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439
+L L++N L +P + LT ++ L+L N + F SL + L N
Sbjct: 104 ELALNTNQLQS-LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 34/160 (21%)
Query: 163 KSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222
LD N L +LT L L L N L SLP + L SL+YL++S N L
Sbjct: 31 TYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQ 89
Query: 223 GNIPPEI-GNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRE 281
++P + L +L +L L N+L +P
Sbjct: 90 -SLPNGVFDKLTQLKELALN-----------------------------TNQLQS-LPDG 118
Query: 282 LCNS-GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNN 320
+ + L ++ L N L + VFDR T+L + L +N
Sbjct: 119 VFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 6e-04
Identities = 41/174 (23%), Positives = 62/174 (35%), Gaps = 21/174 (12%)
Query: 308 RCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASN 367
RC+ V ++ S+P I DL+ N+ + +L + N
Sbjct: 4 RCSCSGTTVECYSQGRTSVPTGIPA-QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGN 62
Query: 368 LLEGSLSWEISNA-VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426
L+ SL + N +L L+LS+N L LT ++ L LN+N + F
Sbjct: 63 KLQ-SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFD 121
Query: 427 DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP-GSLSRLTNLTTLNLFGN 479
L L L N L +P G RLT+L + L N
Sbjct: 122 KLTQLKDLRLYQNQLKS-----------------VPDGVFDRLTSLQYIWLHDN 158
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 46/212 (21%), Positives = 78/212 (36%), Gaps = 40/212 (18%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVK-----KLSQATGQCDREFAA---EMETLDMVK 715
+G G K VA+K K + + + E+E L +
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 716 HQNLVQLLGYCSVGEEK--LLVYEYMVNGSLDDW------LRNRAASLDWGKRCKIAYGA 767
H ++++ + + + +V E M G L D L+ Y
Sbjct: 74 HPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKEATCK-------LYFYQM 123
Query: 768 ARGISFLH-HGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTA 823
+ +LH +G IIH D+K N+LL+ E K++DFG ++++ E+ +
Sbjct: 124 LLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLC 177
Query: 824 DTIGYVPSE---YGQAGRANERGDIYSFGVIL 852
T Y+ E N D +S GVIL
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 2e-10
Identities = 36/106 (33%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 449 YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQGLYLGHNQLTG 507
L L +N L G +LT LT L+L N + S+P D L K+ LYL N+L
Sbjct: 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENKLQ- 89
Query: 508 SIPE----SLG-----YLSGNKLYGSVPT-SFGNLNGLTHLDLSCN 543
S+P L L N+L SVP F L L + L N
Sbjct: 90 SLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 2e-07
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-LTQ 185
S+P+ G+ + + L SN + QL L S N + ++P + D LT+
Sbjct: 21 SVPT--GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTK 77
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYL 240
L L L +N L SLP + L L L + N L ++P I L L ++L
Sbjct: 78 LTILYLHENKLQ-SLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWL 131
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 14/91 (15%)
Query: 469 TNLTTLNLFGNLLTGSIPPEFGDSL-KVQGLYLGHNQLTGSIPE----SLG-----YLSG 518
++ T L L N L S+P D L ++ L L NQ+ S+P+ L YL
Sbjct: 28 SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHE 85
Query: 519 NKLYGSVPTS-FGNLNGLTHLDLSCNELDGI 548
NKL S+P F L L L L N+L +
Sbjct: 86 NKL-QSLPNGVFDKLTQLKELALDTNQLKSV 115
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 2e-10
Identities = 58/226 (25%), Positives = 86/226 (38%), Gaps = 36/226 (15%)
Query: 665 FE--NVIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDRE---FAAEMETLDMVK 715
FE VIG G F K K A+K L++ E F E + L
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNA---DKVFAMKILNKWEMLKRAETACFREERDVLVNGD 132
Query: 716 HQNLVQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGA--ARGIS 772
+ + L Y + L LV +Y V G L L L + + Y A I
Sbjct: 133 SKWITTLH-YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLP-EEMARF-YLAEMVIAID 189
Query: 773 FLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA-RLISDCESHVSTDTA-DTIGYV 829
+H +H DIK NIL++ +++DFG +L+ D V + A T Y+
Sbjct: 190 SVHQLH----YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED--GTVQSSVAVGTPDYI 243
Query: 830 PSEYGQAGRANERG-----DIYSFGVILLELVTGKQPTGPEFEDKD 870
E QA + D +S GV + E++ G+ P F +
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP----FYAES 285
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 3e-10
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 39/200 (19%)
Query: 688 VAVK-----KLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNG 742
VAVK + +E + M+ H+N+V+ G+ G + L EY G
Sbjct: 35 VAVKIVDMKRAVDCPENIKKE----ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90
Query: 743 SLDDWLRNRAASLDWGKRCKIAYGAAR--------GISFLH-HGFKPYIIHMDIKTSNIL 793
L D + + A+ G+ +LH G I H DIK N+L
Sbjct: 91 ELFDRIEPDI---------GMPEPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLL 137
Query: 794 LNDYFEAKVSDFGLARLISDCESHVSTDTA-DTIGYVPSE--YGQAGRANERGDIYSFGV 850
L++ K+SDFGLA + + T+ YV E + E D++S G+
Sbjct: 138 LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGI 196
Query: 851 ILLELVTGKQPTGPEFEDKD 870
+L ++ G+ P ++
Sbjct: 197 VLTAMLAGELP----WDQPS 212
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 4e-10
Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 39/203 (19%)
Query: 688 VAVKKL--SQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLD 745
VA+K + +Q ++ E+ + ++ H N+V+L + L+ EY G +
Sbjct: 43 VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF 102
Query: 746 DWLRNRAASLDWGKRCKIAYGAAR--------GISFLHHGFKPYIIHMDIKTSNILLNDY 797
D+L ++ AR + + H + I+H D+K N+LL+
Sbjct: 103 DYLVAHG---------RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDAD 150
Query: 798 FEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE------YGQAGRANERGDIYSFGVI 851
K++DFG + + + Y E Y G D++S GVI
Sbjct: 151 MNIKIADFGFSNEFTV-GGKLDA-FCGAPPYAAPELFQGKKY--DGPEV---DVWSLGVI 203
Query: 852 LLELVTGKQPTGPEFEDKDGGNL 874
L LV+G P F+ ++ L
Sbjct: 204 LYTLVSGSLP----FDGQNLKEL 222
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 5e-10
Identities = 56/230 (24%), Positives = 88/230 (38%), Gaps = 43/230 (18%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMVKHQNLV 720
V+G GGF F K T K A KKL++ + + + E + L V + +V
Sbjct: 192 VLGRGGFGEVFACQMKAT---GKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIV 248
Query: 721 QLLGYCSVGEEKL-LVYEYMVNGSL-----DDWLRNRAASLDWGKRCKIAYGA--ARGIS 772
L Y + L LV M G + + N R Y A G+
Sbjct: 249 SLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP---RAIF-YTAQIVSGLE 303
Query: 773 FLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE 832
LH + II+ D+K N+LL+D ++SD GLA + ++ A T G++ E
Sbjct: 304 HLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGFMAPE 359
Query: 833 ------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVD 876
Y + D ++ GV L E++ + P F +
Sbjct: 360 LLLGEEYDFS------VDYFALGVTLYEMIAARGP----FRARGEKVENK 399
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 6e-10
Identities = 52/266 (19%), Positives = 97/266 (36%), Gaps = 90/266 (33%)
Query: 666 ENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAA-EMETLDMVKHQNLVQLL 723
+G G F + + K A+KK+ Q D + E++ + ++ H N+++L+
Sbjct: 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQ-----DPRYKNRELDIMKVLDHVNIIKLV 66
Query: 724 GY-CSVGEEKL-------------------------------------LVYEYM---VNG 742
Y + G+E+ ++ EY+ ++
Sbjct: 67 DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHK 126
Query: 743 SLDDWLRNRAA-SLDWGKRCK-IAYGAARGISFLH-HGFKPYIIHMDIKTSNILLN-DYF 798
L ++R+ + ++ Y R + F+H G I H DIK N+L+N
Sbjct: 127 VLKSFIRSGRSIPMN---LISIYIYQLFRAVGFIHSLG----ICHRDIKPQNLLVNSKDN 179
Query: 799 EAKVSDFGLARLISDCESHVSTDTADTIGYV-------------PSEYGQAGRANERGDI 845
K+ DFG A+ + E V+ Y+ +EY + D+
Sbjct: 180 TLKLCDFGSAKKLIPSEPSVA--------YICSRFYRAPELMLGATEYTPS------IDL 225
Query: 846 YSFGVILLELVTGKQPTGPEFEDKDG 871
+S G + EL+ GK P F +
Sbjct: 226 WSIGCVFGELILGK----PLFSGETS 247
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 8e-10
Identities = 36/161 (22%), Positives = 56/161 (34%), Gaps = 36/161 (22%)
Query: 387 DLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVV 446
D + L IP+ I + L LN N I L L
Sbjct: 14 DCTGRGLKE-IPRDI--PLHTTELLLNDNELGRISSDGLFG--RLPHLV----------- 57
Query: 447 VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQGLYLGHNQL 505
L L N L+G P + +++ L L N + I + L +++ L L NQ+
Sbjct: 58 --KLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLKTLNLYDNQI 114
Query: 506 TGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELD 546
+ + SF +LN LT L+L+ N +
Sbjct: 115 S-CVMPG---------------SFEHLNSLTSLNLASNPFN 139
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 36/135 (26%)
Query: 91 RILDLSKNLLFGQLSPQ--VSNLKRLKMLSVGENQLSGSIPSQLGL---LTRLETISLRS 145
L L+ N L G++S L L L + NQL+ I + ++ + L
Sbjct: 32 TELLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLT-GIEP--NAFEGASHIQELQLGE 87
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-LTQLQDLDLSDNLLSGSLPVSL 204
N ++K + +++ L QL+ L+L DN +S +
Sbjct: 88 N--------------KIKEI-----------SNKMFLGLHQLKTLNLYDNQIS-CVMPGS 121
Query: 205 LKNLQSLSYLDVSNN 219
++L SL+ L++++N
Sbjct: 122 FEHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 16/99 (16%)
Query: 381 VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNN 440
L KL+L N LT P ++IQ L+L N I F L TL+
Sbjct: 54 PHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN----- 108
Query: 441 LNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGN 479
L +N +S +PGS L +LT+LNL N
Sbjct: 109 -----------LYDNQISCVMPGSFEHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Query: 264 LKYISLSNNKLSGPIPRELCNS-GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRI 322
L + L N+L+G I + E+ L N + +F L L L +N+I
Sbjct: 56 LVKLELKRNQLTG-IEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQI 114
Query: 323 SGSIPE 328
S +
Sbjct: 115 S-CVMP 119
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 5e-04
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 269 LSNNKLSGPIPRELCNS-GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIP 327
L++N+L L LV++ L N L+G + F+ +++ EL L N+
Sbjct: 36 LNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK------ 89
Query: 328 EYISELPLKVFD 339
I E+ K+F
Sbjct: 90 --IKEISNKMFL 99
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 7e-04
Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 17/116 (14%)
Query: 187 QDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEI-GNLKKLSDLYLGIGPY 245
+L L+DN L L L L L++ N L+ I P + +L LG
Sbjct: 32 TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASHIQELQLGEN-- 88
Query: 246 QL-SLFVG---RITPEIGNCSMLKYISLSNNKLSGPIPRELCNS-GSLVEINLDGN 296
++ + + LK ++L +N++S + SL +NL N
Sbjct: 89 KIKEISNKMFLGLHQ-------LKTLNLYDNQISC-VMPGSFEHLNSLTSLNLASN 136
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 8e-10
Identities = 51/217 (23%), Positives = 82/217 (37%), Gaps = 38/217 (17%)
Query: 664 VFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAA-EMETL-DMVKHQNLV 720
V V+G G + Q+ A+K L D A E+E + ++V
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ------DCPKARREVELHWRASQCPHIV 118
Query: 721 QLLGYC--SVGEEK--LLVYEYMVNGSLDDWLRNR--------AASLDWGKRCKIAYGAA 768
+++ K L+V E + G L +++R AS +I
Sbjct: 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-------EIMKSIG 171
Query: 769 RGISFLH-HGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTAD 824
I +LH I H D+K N+L K++DFG A+ + S T
Sbjct: 172 EAIQYLHSIN----IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCY 225
Query: 825 TIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
T YV E + ++ D++S GVI+ L+ G P
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 48/232 (20%), Positives = 78/232 (33%), Gaps = 70/232 (30%)
Query: 685 QKTVAVKKLSQATGQCDREFAA----EMETLDMVKHQNLVQLLG-YCSVGEEKL----LV 735
+K VA+KK+++ D E+ L+ +K +++L K +V
Sbjct: 51 EKNVAIKKVNRMFE--DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIV 108
Query: 736 YEYM---------VNGSLDDWLRNRAASLDWGKRCK-IAYGAARGISFLHHGFKPYIIHM 785
E L + + K I Y G +F+H IIH
Sbjct: 109 LEIADSDLKKLFKTPIFLTE------------EHIKTILYNLLLGENFIHES---GIIHR 153
Query: 786 DIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTI---------------GYV- 829
D+K +N LLN KV DFGLAR I+ + + + +V
Sbjct: 154 DLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV 213
Query: 830 ------------PSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869
Y ++ DI+S G I EL+ Q + ++
Sbjct: 214 TRWYRAPELILLQENYTKS------IDIWSTGCIFAELLNMLQSHINDPTNR 259
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 2e-09
Identities = 55/359 (15%), Positives = 119/359 (33%), Gaps = 29/359 (8%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
+L SL I L+ + F L V+ LK L + + + L +LE +
Sbjct: 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGG 244
Query: 146 ------NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGS 199
+ L K+L+ L + + +P+ ++L L+LS +
Sbjct: 245 YTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSY 304
Query: 200 LPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPE-- 257
V LL L L V + + + K L +L + + +T +
Sbjct: 305 DLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGL 364
Query: 258 ---IGNCSMLKYISLSNNKLSG----------PIPRE--LCNSGSLVEINLDGNMLSGTI 302
C L+ + +++ P LC L L
Sbjct: 365 VSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGF 424
Query: 303 EDVFDRCTNLSELVLVNNRISGSIPEYISELP--LKVFDLQYNNFTGVIPVSLWNS-ENL 359
+ + C +L L L + ++ + EYI +++ + + + + + + ++L
Sbjct: 425 GAIVEHCKDLRRLSL-SGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSL 483
Query: 360 MEFN-AASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIG-NLTNIQILKLNSNF 416
+ + +L S + L +SS ++ K +G + + + ++
Sbjct: 484 RKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 1e-07
Identities = 65/493 (13%), Positives = 158/493 (32%), Gaps = 67/493 (13%)
Query: 44 LSGWNKTTRHCHWFGVKCRHSRVVSLV-----IQTQSLKGPVSPFLFNLSSLRILDLSKN 98
+ W + C +++ +++ LKG FNL
Sbjct: 40 IERWCRRKVFIGN----CYAVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYP 95
Query: 99 LLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGL------LTRLETISLRS-NSFTGE 151
+ +S + L+ ++ L + + L + + L S F+ +
Sbjct: 96 WI-EAMSSSYTWLEEIR--------LKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTD 146
Query: 152 MPSELGDI-KQLKSLDFSGNGLNGTIPSRLGDL----TQLQDLDLSD--NLLSGSLPVSL 204
+ + + LK LD + ++ L T L L++S + +S S L
Sbjct: 147 GLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERL 206
Query: 205 LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSL-FVGRITPEIGNCSM 263
+ +L L ++ + + + +L +L G ++ ++ + C
Sbjct: 207 VTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKE 266
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDG-NMLSGTIEDVFDRCTNLSELVLVNNRI 322
L+ +S + + +P L +NL + S + + +C L L +++
Sbjct: 267 LRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIE 326
Query: 323 SGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSW--EISN 379
+ S L+ + + + P + L+ + LE L + +++N
Sbjct: 327 DAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTN 386
Query: 380 A---------VALEKLDLS--SNMLTRQIPKKIG---------NLTNIQILKLNSNFFDG 419
A + + L + + + +++ L L+ D
Sbjct: 387 AALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDK 446
Query: 420 IIPMEFGDCISLNTLDLGSNN---------LNGCVVVVYLLLNNNMLSGK-IPGSLSRLT 469
+ + L + L+GC + L + + K + + S+L
Sbjct: 447 VFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLE 506
Query: 470 NLTTLNLFGNLLT 482
+ +L + ++
Sbjct: 507 TMRSLWMSSCSVS 519
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 2e-05
Identities = 39/301 (12%), Positives = 94/301 (31%), Gaps = 43/301 (14%)
Query: 179 RLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDL 238
++ + + P ++++ + +++ P + + D
Sbjct: 36 SWYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRSVELKGK-------PHFADFNLVPDG 88
Query: 239 YLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSG-SLVEINLDG-- 295
+ G + + + L+ I L ++ + S + + L
Sbjct: 89 WGGYVYPWIEAMSS-------SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCE 141
Query: 296 NMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWN 355
+ + + C NL EL L + + ++S P L N + +
Sbjct: 142 GFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCL------- 194
Query: 356 SENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSN 415
+ + F+A L+ + L+ L L+ + ++ + ++ L
Sbjct: 195 -ASEVSFSALERLVTRCPN--------LKSLKLNRAVPLEKLATLLQRAPQLEELGTGG- 244
Query: 416 FFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLN 475
+ + + S L+GC + L + + +P S + LTTLN
Sbjct: 245 ---------YTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLN 295
Query: 476 L 476
L
Sbjct: 296 L 296
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 2e-09
Identities = 59/228 (25%), Positives = 84/228 (36%), Gaps = 38/228 (16%)
Query: 665 FE--NVIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDRE---FAAEMETLDMVK 715
FE VIG G F K T + A+K +++ E F E + L
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQT---GQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD 119
Query: 716 HQNLVQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGA--ARGIS 772
+ + QL + E L LV EY V G L L + + + Y A I
Sbjct: 120 RRWITQLH-FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIP-AEMARF-YLAEIVMAID 176
Query: 773 FLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA-RLISDCESHVSTDTA-DTIGYV 829
+H G +H DIK NILL+ +++DFG +L +D V + A T Y+
Sbjct: 177 SVHRLG----YVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD--GTVRSLVAVGTPDYL 230
Query: 830 PSEYGQAGRANERGDIY-------SFGVILLELVTGKQPTGPEFEDKD 870
E QA Y + GV E+ G+ P F
Sbjct: 231 SPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP----FYADS 274
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 48/231 (20%), Positives = 83/231 (35%), Gaps = 39/231 (16%)
Query: 666 ENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
+ V+G G + + A+K L + + +E + ++V +L
Sbjct: 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-KARQEVDHHWQASG---GPHIVCILD 89
Query: 725 -YCSVGEEKLLVY---EYMVNGSLDDWLRNR--------AASLDWGKRCKIAYGAARGIS 772
Y ++ K + E M G L ++ R A+ +I I
Sbjct: 90 VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAA-------EIMRDIGTAIQ 142
Query: 773 FLH-HGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTADTIGY 828
FLH H I H D+K N+L + K++DFG A+ + T Y
Sbjct: 143 FLHSHN----IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET---TQNALQTPCYTPYY 195
Query: 829 VPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
V E + ++ D++S GVI+ L+ G P F G + +
Sbjct: 196 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP----FYSNTGQAISPGMK 242
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 3e-09
Identities = 46/233 (19%), Positives = 78/233 (33%), Gaps = 63/233 (27%)
Query: 683 PDQKTVAVKKLSQA---TGQCDREFAAEMETLDMVKHQNLVQLLG-YCSVGEEKL----L 734
+++ VA+KK+ + C R E+ L+ + H ++V++L EK +
Sbjct: 76 LEKRVVAIKKILRVFEDLIDCKRILR-EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV 134
Query: 735 VYEYM---------VNGSLDDWLRNRAASLDWGKRCK-IAYGAARGISFLH-HGFKPYII 783
V E L + K + Y G+ ++H G I+
Sbjct: 135 VLEIADSDFKKLFRTPVYLTE------------LHIKTLLYNLLVGVKYVHSAG----IL 178
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERG 843
H D+K +N L+N KV DFGLAR + E+ S + N +
Sbjct: 179 HRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKR 238
Query: 844 ---------------------------DIYSFGVILLELVTGKQPTGPEFEDK 869
D++S G I EL+ + D+
Sbjct: 239 QLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADR 291
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 4e-09
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 21/205 (10%)
Query: 668 VIGGGGFRTAFKGTMPDQKTV-AVKKLSQATGQCDREFA---AEMETLDMVKHQN---LV 720
+IG GGF + D + A+K L + + + E L +V + +V
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 721 QLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGA--ARGISFLHHG 777
+ Y +KL + + M G L L + + Y A G+ +H
Sbjct: 256 CM-SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE--ADMRF-YAAEIILGLEHMH-- 309
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG 837
++++ D+K +NILL+++ ++SD GLA S + H S T GY+ E Q G
Sbjct: 310 -NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMAPEVLQKG 365
Query: 838 RANERG-DIYSFGVILLELVTGKQP 861
A + D +S G +L +L+ G P
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSP 390
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 5e-09
Identities = 62/224 (27%), Positives = 88/224 (39%), Gaps = 35/224 (15%)
Query: 665 FE--NVIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDRE---FAAEMETLDMVK 715
+E VIG G F K T +K A+K LS+ + F E + +
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 127
Query: 716 HQNLVQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGA--ARGIS 772
+VQL Y + L +V EYM G L + + N W + Y A +
Sbjct: 128 SPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAR----FYTAEVVLALD 182
Query: 773 FLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTA-DTIGYVP 830
+H G IH D+K N+LL+ K++DFG ++ E V DTA T Y+
Sbjct: 183 AIHSMG----FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTPDYIS 237
Query: 831 SE----YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
E G G D +S GV L E++ G P F
Sbjct: 238 PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP----FYADS 277
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 5e-09
Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 40/205 (19%)
Query: 685 QKTVAVKKLSQATGQCDREFAA----EMETL-DMVKHQNLVQLLG--YCSVGEEKLLVYE 737
+ VAVKK+ A + A E+ L ++ H+N+V LL + LV++
Sbjct: 34 GEVVAVKKIFDAFQ--NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFD 91
Query: 738 YMVNGSLDDWLRN--RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795
YM + L RA L+ + + Y + I +LH G ++H D+K SNILLN
Sbjct: 92 YM-----ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLN 143
Query: 796 DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG-----------RA----- 839
KV+DFGL+R + + + RA
Sbjct: 144 AECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL 203
Query: 840 NERG-----DIYSFGVILLELVTGK 859
D++S G IL E++ GK
Sbjct: 204 GSTKYTKGIDMWSLGCILGEILCGK 228
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 6e-09
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 44/209 (21%)
Query: 685 QKTVAVKKLSQAT-------GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737
VAVK L++ G+ RE ++ L + +H ++++L S + +V E
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKRE----IQNLKLFRHPHIIKLYQVISTPTDFFMVME 91
Query: 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR--------GISFLHHGFKPYIIHMDIKT 789
Y+ G L D++ ++ AR + + H + ++H D+K
Sbjct: 92 YVSGGELFDYICKHG---------RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKP 139
Query: 790 SNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE--YGQ--AGRANERGDI 845
N+LL+ + AK++DFGL+ ++SD + T + + Y E G+ AG DI
Sbjct: 140 ENVLLDAHMNAKIADFGLSNMMSD-GEFLRT-SCGSPNYAAPEVISGRLYAGPE---VDI 194
Query: 846 YSFGVILLELVTGKQPTGPEFEDKDGGNL 874
+S GVIL L+ G P F+D+ L
Sbjct: 195 WSCGVILYALLCGTLP----FDDEHVPTL 219
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 6e-09
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 45/209 (21%)
Query: 685 QKTVAVK-----KLSQA--TGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737
Q+ VA+K L ++ + +RE + L +++H ++++L + + ++V E
Sbjct: 34 QQKVALKFISRQLLKKSDMHMRVERE----ISYLKLLRHPHIIKLYDVITTPTDIVMVIE 89
Query: 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR--------GISFLHHGFKPYIIHMDIKT 789
Y G L D++ + ++ R I + H + I+H D+K
Sbjct: 90 Y-AGGELFDYIVEKK---------RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKP 136
Query: 790 SNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE--YGQ--AGRANERGDI 845
N+LL+D K++DFGL+ +++D + + T + + Y E G+ AG D+
Sbjct: 137 ENLLLDDNLNVKIADFGLSNIMTD-GNFLKT-SCGSPNYAAPEVINGKLYAGPE---VDV 191
Query: 846 YSFGVILLELVTGKQPTGPEFEDKDGGNL 874
+S G++L ++ G+ P F+D+ NL
Sbjct: 192 WSCGIVLYVMLVGRLP----FDDEFIPNL 216
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 8e-09
Identities = 35/218 (16%), Positives = 78/218 (35%), Gaps = 56/218 (25%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETL-------DMVKHQNLV 720
+G G + F+ + + + V VK L + + + ++ N++
Sbjct: 44 LGRGKYSEVFEAINITNNEKVVVKIL--------KPVKKK-KIKREIKILENLRGGPNII 94
Query: 721 QLLGYCSVGEEK--LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH-HG 777
L + LV+E++ N + +L Y + + + H G
Sbjct: 95 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSMG 150
Query: 778 FKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPS----- 831
I+H D+K N++++ ++ + ++ D+GLA + + V S
Sbjct: 151 ----IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN--------VRVASRYFKG 198
Query: 832 --------EYGQAGRANERGDIYSFGVILLELVTGKQP 861
Y + D++S G +L ++ K+P
Sbjct: 199 PELLVDYQMYDYS------LDMWSLGCMLASMIFRKEP 230
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 1e-08
Identities = 30/145 (20%), Positives = 57/145 (39%), Gaps = 29/145 (20%)
Query: 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISL 143
L L + + L LS N + ++S +S ++ L++LS+G N + I + + LE + +
Sbjct: 44 LSTLKACKHLALSTNNI-EKISS-LSGMENLRILSLGRNLIK-KIENLDAVADTLEELWI 100
Query: 144 RSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVS 203
N I L ++ L L+ L +S+N ++ +
Sbjct: 101 SYNQ-----------IASLSGIE---------------KLVNLRVLYMSNNKITNWGEID 134
Query: 204 LLKNLQSLSYLDVSNNLLSGNIPPE 228
L L L L ++ N L +
Sbjct: 135 KLAALDKLEDLLLAGNPLYNDYKEN 159
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 5e-07
Identities = 36/175 (20%), Positives = 57/175 (32%), Gaps = 40/175 (22%)
Query: 447 VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLK-VQGLYLGHNQL 505
V L + K+ +LS L L L N + I ++ ++ L LG N +
Sbjct: 27 KVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIE-KI--SSLSGMENLRILSLGRNLI 82
Query: 506 TGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPE 565
+ + L L +S N++ + G
Sbjct: 83 K-----------------KIENLDAVADTLEELWISYNQIASLSG--------------- 110
Query: 566 LGNLVQLEYLDFSMNMLD--GHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQN 618
+ LV L L S N + G I +KL +L L L LA N L + +
Sbjct: 111 IEKLVNLRVLYMSNNKITNWGEI-DKLAALDKLEDLLLAGNPLYNDYKENNATSE 164
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 1e-06
Identities = 35/202 (17%), Positives = 73/202 (36%), Gaps = 30/202 (14%)
Query: 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI--IPMEFGDCISLNTLDLGSN- 439
+ K + + +K T + ++L+ I + + L L +N
Sbjct: 1 MAKATTIKDAIRIFEERKSVVATEAEKVELH-GMIPPIEKMDATLSTLKACKHLALSTNN 59
Query: 440 -----NLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLK 494
+L+G + L L N++ KI + L L + N + S+ +
Sbjct: 60 IEKISSLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLSG-IEKLVN 116
Query: 495 VQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQ 554
++ LY+ +N++T + L+ L+ L L L+ N L
Sbjct: 117 LRVLYMSNNKITN--WGEIDKLA-------------ALDKLEDLLLAGNPLYNDYKENNA 161
Query: 555 SNKFYGEIPPELGNLVQLEYLD 576
++++ E+ + L L+ LD
Sbjct: 162 TSEYRIEV---VKRLPNLKKLD 180
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 8/130 (6%)
Query: 288 LVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFT 346
VE++ + ++ L L N I I +S + L++ L N
Sbjct: 27 KVELHGMIPPIEK-MDATLSTLKACKHLALSTNNIE-KI-SSLSGMENLRILSLGRNLIK 83
Query: 347 GVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTR-QIPKKIGNLT 405
I ++ L E + N + SLS I V L L +S+N +T K+ L
Sbjct: 84 -KIENLDAVADTLEELWISYNQIA-SLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALD 140
Query: 406 NIQILKLNSN 415
++ L L N
Sbjct: 141 KLEDLLLAGN 150
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 8e-06
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 17/136 (12%)
Query: 164 SLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSG 223
L + + + L L + L LS N + +S L +++L L + NL+
Sbjct: 29 ELHGMIPPIEK-MDATLSTLKACKHLALSTNNIE---KISSLSGMENLRILSLGRNLIK- 83
Query: 224 NIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT--PEIGNCSMLKYISLSNNKLSGPIP-R 280
+I NL ++D +L + +I I L+ + +SNNK++
Sbjct: 84 ----KIENLDAVADTLE-----ELWISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEID 134
Query: 281 ELCNSGSLVEINLDGN 296
+L L ++ L GN
Sbjct: 135 KLAALDKLEDLLLAGN 150
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 2e-08
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 46/210 (21%)
Query: 685 QKTVAVKKLSQAT-------GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737
VAVK L++ G+ RE ++ L + +H ++++L S + +V E
Sbjct: 41 GHKVAVKILNRQKIRSLDVVGKIRRE----IQNLKLFRHPHIIKLYQVISTPSDIFMVME 96
Query: 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR--------GISFLH-HGFKPYIIHMDIK 788
Y+ G L D++ R +R G+ + H H ++H D+K
Sbjct: 97 YVSGGELFDYICKN-------GRLDEK--ESRRLFQQILSGVDYCHRHM----VVHRDLK 143
Query: 789 TSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE--YGQ--AGRANERGD 844
N+LL+ + AK++DFGL+ ++SD + T + + Y E G+ AG D
Sbjct: 144 PENVLLDAHMNAKIADFGLSNMMSD-GEFLRT-SCGSPNYAAPEVISGRLYAGPE---VD 198
Query: 845 IYSFGVILLELVTGKQPTGPEFEDKDGGNL 874
I+S GVIL L+ G P F+D L
Sbjct: 199 IWSSGVILYALLCGTLP----FDDDHVPTL 224
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-08
Identities = 28/131 (21%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 92 ILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGE 151
++ L+ L+ + + Q +N R + L + ++ I + L + + I N
Sbjct: 1 MVKLTAELI--EQAAQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-- 55
Query: 152 MPSELGDI---KQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNL 208
+L ++LK+L + N + L L +L L++N L + L +L
Sbjct: 56 ---KLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASL 112
Query: 209 QSLSYLDVSNN 219
+SL+YL + N
Sbjct: 113 KSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 3e-08
Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 20/142 (14%)
Query: 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISL 143
N R LDL + + + L + + +N++ + LL RL+T+ +
Sbjct: 15 YTNAVRDRELDLRGYKI-PVIENLGATLDQFDAIDFSDNEIR-KL-DGFPLLRRLKTLLV 71
Query: 144 RSNSFTGEMPSELGDIKQLKSLDFSGNGLN--GTIPSRLGDLTQLQDLDLSDNLLSGSLP 201
+N + L L + N L G + L L L L + N P
Sbjct: 72 NNNRICRIGEGLDQALPDLTELILTNNSLVELGDL-DPLASLKSLTYLCILRN------P 124
Query: 202 VSLLKN--------LQSLSYLD 215
V+ K+ + + LD
Sbjct: 125 VTNKKHYRLYVIYKVPQVRVLD 146
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 21/103 (20%), Positives = 34/103 (33%), Gaps = 17/103 (16%)
Query: 527 TSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHI 586
+ N LDL ++ I L L Q + +DFS N +
Sbjct: 13 AQYTNAVRDRELDLRGYKIPVIENL--------------GATLDQFDAIDFSDNEIRKL- 57
Query: 587 PEKLCSLPYLLYLNLADNRLEG-EVPRSGICQNLSIISLTGNK 628
+ L L L + +NR+ +L+ + LT N
Sbjct: 58 -DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNS 99
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 6e-05
Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 9/103 (8%)
Query: 386 LDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN------ 439
+ L++ ++ + + N + L L I + + +D N
Sbjct: 2 VKLTAELIEQA--AQYTNAVRDRELDLRGYKIPVIENLG-ATLDQFDAIDFSDNEIRKLD 58
Query: 440 NLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT 482
+ LL+NNN + G L +LT L L N L
Sbjct: 59 GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 8e-05
Identities = 25/160 (15%), Positives = 48/160 (30%), Gaps = 37/160 (23%)
Query: 189 LDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLS 248
+ L+ L+ + + + L L G P I NL
Sbjct: 2 VKLTAELIEQAAQYTNAVRDRELD--------LRGYKIPVIENLGA-------------- 39
Query: 249 LFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDR 308
I S+N++ + L + ++ N + E +
Sbjct: 40 -----------TLDQFDAIDFSDNEIR-KL-DGFPLLRRLKTLLVNNNRICRIGEGLDQA 86
Query: 309 CTNLSELVLVNNRISG-SIPEYISELP-LKVFDLQYNNFT 346
+L+EL+L NN + + ++ L L + N T
Sbjct: 87 LPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 126
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.2 bits (137), Expect = 2e-08
Identities = 111/753 (14%), Positives = 211/753 (28%), Gaps = 238/753 (31%)
Query: 149 TGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNL 208
TGE + DI + F + + D D + K++
Sbjct: 11 TGEHQYQYKDILSVFEDAF------------------VDNFDCKDVQ-------DMPKSI 45
Query: 209 QSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVG------------RITP 256
S +D +++ + +L L + FV I
Sbjct: 46 LSKEEID---HII--MSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT 100
Query: 257 EIGNCSML--KYISLSNNKLSGP-------IPRE---------LCNSGSLVEINLDGNML 298
E SM+ YI + + + R L + +DG +L
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG-VL 159
Query: 299 -SGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVF--DLQYNNFTGVIPVSLWN 355
SG T ++ V ++ ++ ++ K+F +L+ N + L
Sbjct: 160 GSGK--------TWVALDVCLSYKV-------QCKMDFKIFWLNLKNCNSPETVLEMLQK 204
Query: 356 SENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSN 415
++ N S S I + + +L + ++ + L N+Q N+
Sbjct: 205 LLYQIDPNWTSR---SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ----NAK 257
Query: 416 FFDGIIPMEFGDC-ISLNTLDLG-SNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTT 473
++ C I L T ++ L+ L ++ LT
Sbjct: 258 AWN---AFNLS-CKILLTTRFKQVTDFLSAATTTHISL--DHHSMT--------LTPDEV 303
Query: 474 LNLFGNLL---TGSIPPEFGDSLKVQGLYLGHNQLTGSIPESL-GYLSGNKLYGSVPTSF 529
+L L +P E + + + I ES+ L+ + V
Sbjct: 304 KSLLLKYLDCRPQDLPRE---------VLTTNPRRLSIIAESIRDGLATWDNWKHV---- 350
Query: 530 GNLNGLTH-LDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPE 588
N + LT ++ S N L+ P E + + S+ HIP
Sbjct: 351 -NCDKLTTIIESSLNVLE----------------PAEYRKM----FDRLSVFPPSAHIPT 389
Query: 589 KLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMGSDCQILTFGKLA 648
L S L++ ++ + + V + S++ K E
Sbjct: 390 ILLS---LIWFDVIKSDVMVVVNK---LHKYSLV----EKQPKE---------------- 423
Query: 649 LVGIVVGSVLVIAIIVFENVIGGGGFRTAFKGTMPDQKTV---AVKKLSQATGQCDREFA 705
S + I I E K + ++ + V + +
Sbjct: 424 -------STISIPSIYLE-----------LKVKLENEYALHRSIVDHYNIPKTFDSDDLI 465
Query: 706 AEMETLDMVKHQNLVQLLGY----CSVGEEKLL---VYEYMVNGSLD-DWLRN--RAASL 755
LD + ++ G+ E L V+ LD +L R S
Sbjct: 466 P--PYLDQYFYSHI----GHHLKNIEHPERMTLFRMVF-------LDFRFLEQKIRHDST 512
Query: 756 DWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-YFEAKVSDFGLARLISDC 814
W A+ I K Y + I ND +E V+ + +
Sbjct: 513 AW--------NASGSILNTLQQLKFYKPY-------ICDNDPKYERLVNA--ILDFLPKI 555
Query: 815 ESH-VSTDTADTIGYVPSEYGQAGRANERGDIY 846
E + + + D + + E I+
Sbjct: 556 EENLICSKYTDLL--------RIALMAEDEAIF 580
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.9 bits (113), Expect = 2e-05
Identities = 85/502 (16%), Positives = 165/502 (32%), Gaps = 153/502 (30%)
Query: 23 EPKQERRSLVHFKNSLQN-PQVLSGWNKTTRHCHW-----------------FGVK-CRH 63
+P R + ++ L N QV + +N + + GV
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163
Query: 64 SRVVSLVIQTQSLKGPVSPF-LF--NLSSLR----ILDLSKNLLFGQLSPQVSNLKRLKM 116
+ V V + ++ F +F NL + +L++ + LL+ Q+ P ++
Sbjct: 164 TWVALDVCLSYKVQ-CKMDFKIFWLNLKNCNSPETVLEMLQKLLY-QIDPNWTSR----- 216
Query: 117 LSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSE-----LGDI---KQLKSLDFS 168
+ S +I R+ +I P E L ++ K + + S
Sbjct: 217 -----SDHSSNIKL------RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS 265
Query: 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSL-PVSLLKNLQSLS----------YLDVS 217
++ L + ++D L + + +SL + +L+ YLD
Sbjct: 266 ---------CKI--LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR 314
Query: 218 NNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIG--------NCSML-KYIS 268
L P E+ L P +LS+ I + NC L I
Sbjct: 315 PQDL----PREV----------LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE 360
Query: 269 LSNNKLSGPIPRELCNSGSL----VEINLD------GNMLSGTIEDVFDRCTNLSELVLV 318
S N L R++ + S+ I +++ + V ++ S +
Sbjct: 361 SSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420
Query: 319 NNRISGSIPEYISELPLKVFDL---------QYNNFTGVIPVSLWNSENLMEFNAASNLL 369
+ SIP EL +K+ + YN IP + ++S++L L
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRSIVDHYN-----IPKT-FDSDDL-----IPPYL 469
Query: 370 EGSLSWEI----SNAVALEKLDLSSNMLT--RQIPKKI----------GNLTN-IQILKL 412
+ I N E++ L + R + +KI G++ N +Q LK
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF 529
Query: 413 -------NSNFFDGIIP--MEF 425
N ++ ++ ++F
Sbjct: 530 YKPYICDNDPKYERLVNAILDF 551
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 2e-08
Identities = 34/96 (35%), Positives = 43/96 (44%), Gaps = 18/96 (18%)
Query: 449 YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQGLYLGHNQLTG 507
L L +N ++ PG RLT LT L+L N LT +P D L ++ L L NQL
Sbjct: 34 VLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDNQLK- 91
Query: 508 SIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCN 543
SIP +F NL LTH+ L N
Sbjct: 92 SIPRG---------------AFDNLKSLTHIWLLNN 112
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 8e-05
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-LTQ 185
S+P+ G+ T + + L N T P + QL LD N L +P+ + D LTQ
Sbjct: 23 SVPT--GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQ 79
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNN 219
L L L+DN L S+P NL+SL+++ + NN
Sbjct: 80 LTQLSLNDNQLK-SIPRGAFDNLKSLTHIWLLNN 112
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 3e-08
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 43/229 (18%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMVKHQNLV 720
IG G F T +K A+K +++ E E++ + ++H LV
Sbjct: 22 AIGKGSFGKVCIVQKNDT---KKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLV 78
Query: 721 QLLGYCSVGEEKL-LVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGA--ARGISFLHH 776
L Y EE + +V + ++ G L L +N + K+ + + +L
Sbjct: 79 NLW-YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE---TVKL-FICELVMALDYLQ- 132
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE---- 832
IIH D+K NILL+++ ++DF +A ++ + A T Y+ E
Sbjct: 133 --NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT--MAGTKPYMAPEMFSS 188
Query: 833 -----YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVD 876
Y A D +S GV EL+ G++P + + + +
Sbjct: 189 RKGAGYSFA------VDWWSLGVTAYELLRGRRP----YHIRSSTSSKE 227
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 3e-08
Identities = 51/388 (13%), Positives = 103/388 (26%), Gaps = 94/388 (24%)
Query: 203 SLLKNLQSLSYLDVSNNLLSGNIPPEIGN-LKKLSDLYLGIGPYQLSLFVGRITPEIGNC 261
++ LD+S N L E+
Sbjct: 16 EFTSIPHGVTSLDLSLNNLYSISTVELIQAFAN-------------------------TP 50
Query: 262 SMLKYISLSNNKLSGPIPRELC-----NSGSLVEINLDGNMLSGT-----IEDVFDRCTN 311
+ + ++LS N L EL ++ +NL GN LS ++ +
Sbjct: 51 ASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFT 110
Query: 312 LSELVLVNNRISGSIPEYISEL------PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAA 365
++ L L N S + + +L+ N+ L + L
Sbjct: 111 ITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL--IQILAAIP-- 166
Query: 366 SNLLEGSLSW-EISNAVA-------------LEKLDLSSNMLTRQIPKKIG-----NLTN 406
+N+ +L +++ + LDLS+N+L + ++ +
Sbjct: 167 ANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNH 226
Query: 407 IQILKLNSNFFDG----IIPMEFGDCISLNTLDLGSNNLN-----GCVVVVYLLLNNNML 457
+ L L N G + + L T+ L + + C + N
Sbjct: 227 VVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNI--- 283
Query: 458 SGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLS 517
+ ++ G + S + ++ L
Sbjct: 284 -----------QKIILVDKNGKEIHPSHSIPISNLIRELSGKADVPSLLNQCLIFAQKHQ 332
Query: 518 GNKLYGSVPTSFGNLNGLTHLDLSCNEL 545
N ++P L +C L
Sbjct: 333 TNIEDLNIPDE------LRESIQTCKPL 354
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 9e-08
Identities = 56/375 (14%), Positives = 100/375 (26%), Gaps = 95/375 (25%)
Query: 80 VSPFLFNLSSLRILDLSKNLLFGQLSPQ---------VSNLKRLKMLSVGENQLSGSIPS 130
V F + LDLS N L + + L++ N L
Sbjct: 14 VEEFTSIPHGVTSLDLSLN----NLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSD 69
Query: 131 QLGLL-----TRLETISLRSNSFTGEMPSELGDI-----KQLKSLDFSGNGLNGTIPSRL 180
+L + + +++L N + + EL + LD N + S
Sbjct: 70 ELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEF 129
Query: 181 GDL-----TQLQDLDLSDNLLSG----SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGN 231
+ L+L N L L L +++ L++ N + +
Sbjct: 130 KQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGN--------NLAS 181
Query: 232 --LKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC-----N 284
+L+ I S + + LS N L EL
Sbjct: 182 KNCAELAKFLASI-----------------PAS-VTSLDLSANLLGLKSYAELAYIFSSI 223
Query: 285 SGSLVEINLDGNMLSGT----IEDVFDRCTNLSELVLVNNRISGSIPEYISEL------- 333
+V +NL N L G ++ + D +L + L + + E L
Sbjct: 224 PNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNI 283
Query: 334 -PLKVFDLQYNNFT--GVIPVS------------LWNSENLMEFNAASNLLEGSLSWEIS 378
+ + D IP+S + F L +
Sbjct: 284 QKIILVDKNGKEIHPSHSIPISNLIRELSGKADVPSLLNQCLIFAQKHQTNIEDL----N 339
Query: 379 NAVALEKLDLSSNML 393
L + + L
Sbjct: 340 IPDELRESIQTCKPL 354
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 1e-05
Identities = 53/315 (16%), Positives = 97/315 (30%), Gaps = 74/315 (23%)
Query: 378 SNAVALEKLDLSSNMLTRQIPKKIG-----NLTNIQILKLNSNFFDGIIPMEFGDCI--- 429
+ ++ L+LS N L + ++ N+ L L+ NF E +
Sbjct: 48 NTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAI 107
Query: 430 --SLNTLDLGSNNL--NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSI 485
++ LDLG N+ N ++T+LNL GN L
Sbjct: 108 PFTITVLDLGWNDFSSKSSSEFKQAFSNLP-------------ASITSLNLRGNDLGIKS 154
Query: 486 PPEFGDSLK-----VQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDL 540
E L V L L N L ++ L+ K S+P S +T LDL
Sbjct: 155 SDELIQILAAIPANVNSLNLRGNNLA---SKNCAELA--KFLASIPAS------VTSLDL 203
Query: 541 SCNELD----------------GIVGLYVQSNKFYGEIPPELGNLVQ----LEYLDFSMN 580
S N L +V L + N +G L L L+ + +
Sbjct: 204 SANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYD 263
Query: 581 MLDG-------HIPEKLCSLPYLLYLNLADNRLEGEVPRS------GICQNLSIISLTGN 627
++ + ++ ++ ++ + + + SL
Sbjct: 264 IVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPISNLIRELSGKADVPSLLNQ 323
Query: 628 KDLCEKIMGSDCQIL 642
+ + ++ + L
Sbjct: 324 CLIFAQKHQTNIEDL 338
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 55.5 bits (133), Expect = 3e-08
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 151 EMPSELGDIKQLKSLDFSGNGLNGTIPSR-LGDLTQLQDLDLSDNLLSGSLPVSLLKNLQ 209
+ L + L L + R L L +L++L + + L +
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTP 80
Query: 210 SLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL 240
LS L++S N L ++ + L +L L
Sbjct: 81 RLSRLNLSFNALE-SLSWKTVQGLSLQELVL 110
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 52.0 bits (124), Expect = 4e-07
Identities = 23/124 (18%), Positives = 37/124 (29%), Gaps = 30/124 (24%)
Query: 175 TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKK 234
L L +L + + L + L+ L L L + + L + P+
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDA----- 75
Query: 235 LSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLD 294
F L ++LS N L + + SL E+ L
Sbjct: 76 ---------------FHF--------TPRLSRLNLSFNALES-LSWKTVQGLSLQELVLS 111
Query: 295 GNML 298
GN L
Sbjct: 112 GNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 52.0 bits (124), Expect = 4e-07
Identities = 19/118 (16%), Positives = 33/118 (27%), Gaps = 18/118 (15%)
Query: 390 SNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPME-FGDCISLNTLDLGSNNLNGCVVVV 448
+ + N+ L + + + + L L +
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTI------------ 63
Query: 449 YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLT 506
+ L P + L+ LNL N L S+ + L +Q L L N L
Sbjct: 64 ----VKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 5e-07
Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 3/99 (3%)
Query: 122 NQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSE-LGDIKQLKSLDFSGNGLNGTIPSRL 180
+ L L + + + + L + +L++L +GL P
Sbjct: 17 RDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAF 76
Query: 181 GDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNN 219
+L L+LS N L SL ++ L SL L +S N
Sbjct: 77 HFTPRLSRLNLSFNALE-SLSWKTVQGL-SLQELVLSGN 113
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 50.1 bits (119), Expect = 1e-06
Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 19/98 (19%)
Query: 452 LNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE-FGDSLKVQGLYLGHNQLTGSIP 510
+ L L NLT L + + +++ L + + L +
Sbjct: 16 TRDGALD--SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVA 72
Query: 511 ESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGI 548
P +F L+ L+LS N L+ +
Sbjct: 73 ---------------PDAFHFTPRLSRLNLSFNALESL 95
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 6e-06
Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Query: 264 LKYISLSNNKLSGPIPRE-LCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRI 322
L + + N + + L G L + + + L D F LS L L N +
Sbjct: 33 LTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNAL 92
Query: 323 SGSIPEYISELPLKVFDLQYNNFT 346
+ + L L+ L N
Sbjct: 93 ESLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 47.4 bits (112), Expect = 1e-05
Identities = 22/123 (17%), Positives = 36/123 (29%), Gaps = 22/123 (17%)
Query: 524 SVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPE-LGNLVQLEYLDFSMNML 582
LT L + + + + L L +L L + L
Sbjct: 22 DSLHHLPGAENLTELYIE-------------NQQHLQHLELRDLRGLGELRNLTIVKSGL 68
Query: 583 DGHIPEK-LCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMGSDCQI 641
+ P L LNL+ N LE ++ +L + L+GN C C +
Sbjct: 69 R-FVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHC------SCAL 121
Query: 642 LTF 644
Sbjct: 122 RWL 124
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 47.0 bits (111), Expect = 2e-05
Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 20/109 (18%)
Query: 440 NLNGCVVVVYLLLNNNMLSGKIP-GSLSRLTNLTTLNLFGNLLTGSIPPE-FGDSLKVQG 497
+L G + L + N + L L L L + + L + P+ F + ++
Sbjct: 26 HLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRLSR 84
Query: 498 LYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELD 546
L L N L S+ + L+ L L LS N L
Sbjct: 85 LNLSFNALE-SLS---------------WKTVQGLS-LQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 3e-05
Identities = 14/100 (14%), Positives = 30/100 (30%), Gaps = 5/100 (5%)
Query: 271 NNKLSGPIPRELCNSGSLVEINLDGNMLSGTIED-VFDRCTNLSELVLVNNRISGSIPEY 329
+ L + +L E+ ++ +E L L +V + + +
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPD 74
Query: 330 I-SELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASN 367
P L +L +N + +L E + N
Sbjct: 75 AFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGN 113
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 45.1 bits (106), Expect = 7e-05
Identities = 18/107 (16%), Positives = 36/107 (33%), Gaps = 18/107 (16%)
Query: 377 ISNAVALEKLDLSSNMLTRQIPKK-IGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLD 435
+ A L +L + + + + + + L ++ L + + + P F L+ L+
Sbjct: 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN 86
Query: 436 LGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT 482
L N L + + +L L L GN L
Sbjct: 87 LSFNALE-----------------SLSWKTVQGLSLQELVLSGNPLH 116
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 3e-08
Identities = 33/96 (34%), Positives = 40/96 (41%), Gaps = 18/96 (18%)
Query: 449 YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL-KVQGLYLGHNQLTG 507
L LNNN ++ PG L NL L N LT +IP D L ++ L L N L
Sbjct: 37 RLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLNDNHLK- 94
Query: 508 SIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCN 543
SIP +F NL LTH+ L N
Sbjct: 95 SIPRG---------------AFDNLKSLTHIYLYNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 127 SIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-LTQ 185
S+P+ G+ T + + L +N T P + L+ L F+ N L IP+ + D LTQ
Sbjct: 26 SVPA--GIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQ 82
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNN 219
L LDL+DN L S+P NL+SL+++ + NN
Sbjct: 83 LTQLDLNDNHLK-SIPRGAFDNLKSLTHIYLYNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 163 KSLDFSGNGLNGTIPSRLGD-LTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLL 221
+ L + N + + + D L LQ L + N L+ ++P + L L+ LD+++N L
Sbjct: 36 QRLWLNNNQIT-KLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLNDNHL 93
Query: 222 SGNIPPEI-GNLKKLSDLYL 240
+IP NLK L+ +YL
Sbjct: 94 K-SIPRGAFDNLKSLTHIYL 112
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 4e-08
Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 40/221 (18%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMVKHQNLV 720
++G G F K T + A+K L + E A E L +H L
Sbjct: 155 LLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 211
Query: 721 QLLGYCSVGEEKL-LVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGA--ARGISFLHH 776
L Y ++L V EY G L L R R S D R + YGA + +LH
Sbjct: 212 ALK-YSFQTHDRLCFVMEYANGGELFFHLSRERVFSED---RARF-YGAEIVSALDYLHS 266
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGYVPSE--- 832
+++ D+K N++L+ K++DFGL + + + T T Y+ E
Sbjct: 267 EKN--VVYRDLKLENLMLDKDGHIKITDFGLCKE--GIKDGATMKTFCGTPEYLAPEVLE 322
Query: 833 ---YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
YG+A D + GV++ E++ G+ P F ++D
Sbjct: 323 DNDYGRA------VDWWGLGVVMYEMMCGRLP----FYNQD 353
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 54.6 bits (130), Expect = 7e-08
Identities = 27/149 (18%), Positives = 58/149 (38%), Gaps = 17/149 (11%)
Query: 86 NLSSLRIL--DLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQL------GLLTR 137
NL SL I+ L +++ L + NL++L + E+ +
Sbjct: 194 NLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPN 253
Query: 138 LETISLRSNSFTGEMPSELGD---IKQLKSLDFSGNGLNGT----IPSRLGDLTQLQDLD 190
L+ + + + + + QL+++D S L + + + L+ ++
Sbjct: 254 LKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFIN 313
Query: 191 LSDNLLSGSLPVSLLKNLQSLSYLDVSNN 219
+ N LS + L K+L +DVS++
Sbjct: 314 MKYNYLSDEMKKELQKSLPMK--IDVSDS 340
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 53.8 bits (128), Expect = 1e-07
Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 14/159 (8%)
Query: 78 GPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLS--VGENQLSGSIPSQLGLL 135
+SP L + L L + NLK L+++S + ++ + + S L L
Sbjct: 162 VDLSPVLDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNL 221
Query: 136 TRLETISLRSNSFTGEMPSELGDI------KQLKSLDFSGNGLNGTIPSRLGD---LTQL 186
+L + + + LK L + + L QL
Sbjct: 222 EKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQL 281
Query: 187 QDLDLSDNLLSGSLPVSLLKNLQSLS---YLDVSNNLLS 222
+ +D+S +L+ LL ++ + ++++ N LS
Sbjct: 282 ETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 50.0 bits (118), Expect = 2e-06
Identities = 30/180 (16%), Positives = 69/180 (38%), Gaps = 20/180 (11%)
Query: 173 NGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIG-- 230
+ L + L +L + +L + L L++ + L ++ +I
Sbjct: 161 QVDLSPVLDAMPLLNNLKIKGT---NNLSIGKKPRPN-LKSLEIISGGLPDSVVEDILGS 216
Query: 231 ---NLKKLSDLYLGIGPYQLSLFVGRITP--EIGNCSMLKYISLSNNKLSGPIPRELCNS 285
NL+KL LY+G+ Y + P LK++ + + + + S
Sbjct: 217 DLPNLEKL-VLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLES 275
Query: 286 G---SLVEINLDGNMLSGT----IEDVFDRCTNLSELVLVNNRISGSIPEYISE-LPLKV 337
L +++ +L+ + D D+ +L + + N +S + + + + LP+K+
Sbjct: 276 DILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKI 335
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 49/288 (17%), Positives = 100/288 (34%), Gaps = 27/288 (9%)
Query: 139 ETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSG 198
+T+ L + ++ L + + + + ++ + ++Q +DLS++++
Sbjct: 50 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFSPF-RVQHMDLSNSVIEV 107
Query: 199 SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPE- 257
S +L L L + LS I + L L L +
Sbjct: 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS--------GCSGFSEFA 159
Query: 258 ----IGNCSMLKYISLSN-NKLSGPIPRELC--NSGSLVEINLDG---NMLSGTIEDVFD 307
+ +CS L ++LS + + S ++ ++NL G N+ + +
Sbjct: 160 LQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR 219
Query: 308 RCTNLSELVLVN-NRISGSIPEYISELP-LKVFDLQY-NNFTGVIPVSLWNSENLMEFNA 364
RC NL L L + + + +L L+ L + + L L
Sbjct: 220 RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQV 279
Query: 365 ASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKL 412
+ +G+L AL L ++ + T IGN N +I +
Sbjct: 280 FGIVPDGTLQ---LLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGI 324
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 5e-07
Identities = 43/271 (15%), Positives = 102/271 (37%), Gaps = 21/271 (7%)
Query: 55 HWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRL 114
W+ + S +L + ++L V+ L + + ++ + L+ S +
Sbjct: 38 RWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVI-AFRCPRSFMDQPLAEHFSPFRVQ 96
Query: 115 KMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSG-NGLN 173
M ++ L ++L+ +SL + + + L L L+ SG +G +
Sbjct: 97 HMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFS 156
Query: 174 GTIPSRLGD-LTQLQDLDLSD--NLLSGSLPVSLLKNLQSLSYLDVSN---NLLSGNIPP 227
L ++L +L+LS + + V++ ++++ L++S NL ++
Sbjct: 157 EFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLST 216
Query: 228 EIGNLKKLSDLYLGIGPYQLSLFVGRITPE----IGNCSMLKYISLSN-NKLSGPIPREL 282
+ L L L + + + L+++SLS + EL
Sbjct: 217 LVRRCPNLVHLDLS--------DSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLEL 268
Query: 283 CNSGSLVEINLDGNMLSGTIEDVFDRCTNLS 313
+L + + G + GT++ + + +L
Sbjct: 269 GEIPTLKTLQVFGIVPDGTLQLLKEALPHLQ 299
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 3e-07
Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 45/224 (20%)
Query: 668 VIGGGGFRTAF---KGTMPDQKTV-AVKKLSQATGQCDREFAAEME--TLDMVKHQNLVQ 721
V+G G F F K + D + + A+K L +AT + +ME L V H +V+
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 722 LLGYCSVGEEKL-LVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGA--ARGISFLH-H 776
L Y E KL L+ +++ G L L + + + K Y A A + LH
Sbjct: 91 LH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE---DVKF-YLAELALALDHLHSL 145
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD----TIGYVPSE 832
G II+ D+K NILL++ K++DFGL++ ES A T+ Y+ E
Sbjct: 146 G----IIYRDLKPENILLDEEGHIKLTDFGLSK-----ESIDHEKKAYSFCGTVEYMAPE 196
Query: 833 ------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
+ Q+ D +SFGV++ E++TG P F+ KD
Sbjct: 197 VVNRRGHTQSA------DWWSFGVLMFEMLTGTLP----FQGKD 230
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 36/144 (25%)
Query: 734 LVYEYMVNGSLDDWLR---NRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTS 790
+V+E + +L ++ +R L + K +I+ G+ ++H IIH DIK
Sbjct: 107 MVFEVL-GENLLALIKKYEHRGIPLIYVK--QISKQLLLGLDYMHRRCG--IIHTDIKPE 161
Query: 791 NILLND------YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE--- 841
N+L+ + K++D G A + H + EY R+ E
Sbjct: 162 NVLMEIVDSPENLIQIKIADLGNACWYDE---HYTNSI------QTREY----RSPEVLL 208
Query: 842 ------RGDIYSFGVILLELVTGK 859
DI+S ++ EL+TG
Sbjct: 209 GAPWGCGADIWSTACLIFELITGD 232
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 5e-07
Identities = 51/227 (22%), Positives = 83/227 (36%), Gaps = 49/227 (21%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCS 727
IG G F A ++ VAVK + + + E+ ++H N+V+
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN-VQREIINHRSLRHPNIVRFKEVIL 86
Query: 728 VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAAR--------GISFLH-HGF 778
++ EY G L + + N + + AR G+S+ H
Sbjct: 87 TPTHLAIIMEYASGGELYERICNAG---------RFSEDEARFFFQQLLSGVSYCHSMQ- 136
Query: 779 KPYIIHMDIKTSNILL--NDYFEAKVSDFGLARLISDCESHVSTDTADTIG---YVPSE- 832
I H D+K N LL + K+ DFG ++ S + T+G Y+ E
Sbjct: 137 ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKS----TVGTPAYIAPEV 188
Query: 833 -----YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNL 874
Y G+ D++S GV L ++ G P FED +
Sbjct: 189 LLRQEY--DGKI---ADVWSCGVTLYVMLVGAYP----FEDPEEPRD 226
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 5e-07
Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 47/226 (20%)
Query: 668 VIGGGGFRTAF---KGTMPDQKTV-AVKKLSQATGQCDREFAAEMET----LDMVKHQNL 719
V+G GG+ F K T + + A+K L +A + + A + L+ VKH +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 720 VQLLGYCSVGEEKL-LVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGA--ARGISFLH 775
V L+ Y KL L+ EY+ G L L R D Y A + + LH
Sbjct: 84 VDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMED---TACF-YLAEISMALGHLH 138
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD----TIGYVP 830
G II+ D+K NI+LN K++DFGL + ES TI Y+
Sbjct: 139 QKG----IIYRDLKPENIMLNHQGHVKLTDFGLCK-----ESIHDGTVTHTFCGTIEYMA 189
Query: 831 SE------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
E + +A D +S G ++ +++TG P F ++
Sbjct: 190 PEILMRSGHNRAV------DWWSLGALMYDMLTGAPP----FTGEN 225
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 49/225 (21%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMVKHQNLV 720
++G G F K T + A+K L + E A E L +H L
Sbjct: 12 LLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 721 QLLGYCSVGEEKL-LVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGA--ARGISFLH- 775
L Y ++L V EY G L L R R + + R + YGA + +LH
Sbjct: 69 ALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE---RARF-YGAEIVSALEYLHS 123
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD----TIGYVPS 831
+++ DIK N++L+ K++DFGL + E T T Y+
Sbjct: 124 RD----VVYRDIKLENLMLDKDGHIKITDFGLCK-----EGISDGATMKTFCGTPEYLAP 174
Query: 832 E------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
E YG+A D + GV++ E++ G+ P F ++D
Sbjct: 175 EVLEDNDYGRA------VDWWGLGVVMYEMMCGRLP----FYNQD 209
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 2e-06
Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 27/109 (24%)
Query: 762 KIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA--KVSDFGLARLISDCESHVS 819
K A+ + + LH K IIH D+K NILL + KV DFG + V
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ---RVY 257
Query: 820 TDTADTIGYVPSEYGQAGRANE---------RGDIYSFGVILLELVTGK 859
T Y+ S + RA E D++S G IL EL+TG
Sbjct: 258 T-------YIQSRFY---RAPEVILGARYGMPIDMWSLGCILAELLTGY 296
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 2e-06
Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 4/85 (4%)
Query: 158 DIKQLKSLDFSGNGLN-GTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDV 216
++ L N G I + L+ L L + L VS L L L L++
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS---VSNLPKLPKLKKLEL 78
Query: 217 SNNLLSGNIPPEIGNLKKLSDLYLG 241
S N + G + L L+ L L
Sbjct: 79 SENRIFGGLDMLAEKLPNLTHLNLS 103
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 3e-06
Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 39/150 (26%)
Query: 74 QSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLG 133
+S G + +L L L L +S + L +LK L + EN++ G +
Sbjct: 35 KSNDGKIEGLTAEFVNLEFLSLINVGL-ISVSN-LPKLPKLKKLELSENRIFGGLDMLAE 92
Query: 134 LLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSD 193
L L ++L N ++ ++ LK L L+ LDL +
Sbjct: 93 KLPNLTHLNLSGNKL-----KDISTLEPLKK------------------LECLKSLDLFN 129
Query: 194 NLLSGSLPVSLLKN--------LQSLSYLD 215
V+ L + L L+YLD
Sbjct: 130 C------EVTNLNDYRESVFKLLPQLTYLD 153
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 4e-06
Identities = 33/167 (19%), Positives = 55/167 (32%), Gaps = 40/167 (23%)
Query: 182 DLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLG 241
+++L L + + L +L +L + N L + NL KL L
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-----SVSNLPKLPKL--- 73
Query: 242 IGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGT 301
K + LS N++ G + +L +NL GN L
Sbjct: 74 -----------------------KKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK-D 109
Query: 302 IEDV--FDRCTNLSELVLVNNRISGSIPEY----ISELP-LKVFDLQ 341
I + + L L L N ++ ++ +Y LP L D
Sbjct: 110 ISTLEPLKKLECLKSLDLFNCEVT-NLNDYRESVFKLLPQLTYLDGY 155
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 5e-06
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 110 NLKRLKMLSVGENQLS-GSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168
++ L + + + G I LE +SL + S L + +LK L+ S
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS--VSNLPKLPKLKKLELS 79
Query: 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNN 219
N + G + L L L+LS N L + LK L+ L LD+ N
Sbjct: 80 ENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 252 GRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTN 311
G+I L+++SL N L + L L ++ L N + G ++ + ++ N
Sbjct: 39 GKIEGLTAEFVNLEFLSLINVGLIS-VSN-LPKLPKLKKLELSENRIFGGLDMLAEKLPN 96
Query: 312 LSELVLVNNRISG-SIPEYISELP-LKVFDLQYN 343
L+ L L N++ S E + +L LK DL
Sbjct: 97 LTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 4e-04
Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 17/107 (15%)
Query: 523 GSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNML 582
G + L L L L + L L +L+ L+ S N +
Sbjct: 39 GKIEGLTAEFVNLEFLSLINVGLISVSNL---------------PKLPKLKKLELSENRI 83
Query: 583 DGHIPEKLCSLPYLLYLNLADNRLE--GEVPRSGICQNLSIISLTGN 627
G + LP L +LNL+ N+L+ + + L + L
Sbjct: 84 FGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 8e-04
Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 8/109 (7%)
Query: 380 AVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439
+ +D+ + + + + + SN DG I + ++L L L +
Sbjct: 2 SSGSSGMDMKRRIHLELRNRTPAAVRELVLDNCKSN--DGKIEGLTAEFVNLEFLSLINV 59
Query: 440 ------NLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT 482
NL + L L+ N + G + +L NLT LNL GN L
Sbjct: 60 GLISVSNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 3e-06
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 158 DIKQLKSLDFSGNGLN-GTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDV 216
+K L + N G + + +L+ L + L+ ++ L L L L++
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS---IANLPKLNKLKKLEL 71
Query: 217 SNNLLSGNIPPEIGNLKKLSDLYLG 241
S+N +SG + L+ L L
Sbjct: 72 SDNRVSGGLEVLAEKCPNLTHLNLS 96
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 5e-06
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 23/100 (23%)
Query: 383 LEKLDLSSNMLTRQIPKKIGNL---TNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439
LE L + LT I NL ++ L+L+ N G + + C +L L+L N
Sbjct: 44 LEFLSTINVGLT-----SIANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGN 98
Query: 440 NLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGN 479
+ + L +L NL +L+LF
Sbjct: 99 KIKDLSTIEP---------------LKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 8e-06
Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 39/138 (28%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
L L L ++ + L +LK L + +N++SG + L ++L
Sbjct: 40 EFEELEFLSTINVGL-TSIA-NLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSG 97
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205
N +L I+ LK L L+ LDL + V+ L
Sbjct: 98 NKI-----KDLSTIEPLKK------------------LENLKSLDLFNC------EVTNL 128
Query: 206 KN--------LQSLSYLD 215
+ L L+YLD
Sbjct: 129 NDYRENVFKLLPQLTYLD 146
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 109 SNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168
S++K L + + N G + LE +S + T + + L + +LK L+ S
Sbjct: 17 SDVKELVLDNSRSN--EGKLEGLTDEFEELEFLSTINVGLT-SI-ANLPKLNKLKKLELS 72
Query: 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNN 219
N ++G + L L+LS N + + LK L++L LD+ N
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 35/167 (20%), Positives = 61/167 (36%), Gaps = 38/167 (22%)
Query: 179 RLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDL 238
R + +++L L ++ + L + L +L N L+ I NL KL+
Sbjct: 12 RNRTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-----SIANLPKLNK- 65
Query: 239 YLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNML 298
LK + LS+N++SG + +L +NL GN +
Sbjct: 66 -------------------------LKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKI 100
Query: 299 SGTIE-DVFDRCTNLSELVLVNNRISGSIPEY----ISELP-LKVFD 339
+ + NL L L N ++ ++ +Y LP L D
Sbjct: 101 KDLSTIEPLKKLENLKSLDLFNCEVT-NLNDYRENVFKLLPQLTYLD 146
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 8e-05
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 14/118 (11%)
Query: 231 NLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNN---KLSGPIPRELCNSGS 287
+ +L L G++ L+++S N ++ L
Sbjct: 15 TPSDVKELVL----DNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIAN-----LPKLNK 65
Query: 288 LVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISG-SIPEYISELP-LKVFDLQYN 343
L ++ L N +SG +E + ++C NL+ L L N+I S E + +L LK DL
Sbjct: 66 LKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 17/107 (15%)
Query: 439 NNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGL 498
+ + +L N L+ I L +L L L L N ++G + + L
Sbjct: 36 GLTDEFEELEFLSTINVGLT-SIAN-LPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93
Query: 499 YLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNEL 545
L N++ ++ L + L LDL E+
Sbjct: 94 NLSGNKIKD--LSTIEPLKKLE-------------NLKSLDLFNCEV 125
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 5e-04
Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 17/99 (17%)
Query: 531 NLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKL 590
L L L I L L +L+ L+ S N + G +
Sbjct: 40 EFEELEFLSTINVGLTSIANL---------------PKLNKLKKLELSDNRVSGGLEVLA 84
Query: 591 CSLPYLLYLNLADNRLE--GEVPRSGICQNLSIISLTGN 627
P L +LNL+ N+++ + +NL + L
Sbjct: 85 EKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 7e-04
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 15/99 (15%)
Query: 531 NLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKL 590
+ + L L + + ++ +LE+L L I L
Sbjct: 15 TPSDVKELVLDNSRSNEG------------KLEGLTDEFEELEFLSTINVGLT-SI-ANL 60
Query: 591 CSLPYLLYLNLADNRLEGEVPR-SGICQNLSIISLTGNK 628
L L L L+DNR+ G + + C NL+ ++L+GNK
Sbjct: 61 PKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNK 99
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 6e-06
Identities = 48/221 (21%), Positives = 78/221 (35%), Gaps = 44/221 (19%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMVKHQNLV 720
+G G F K + A+K L + ++ E L V LV
Sbjct: 48 TLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 721 QLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGA--ARGISFLH-H 776
+L + L +V EY+ G + LR R + Y A +LH
Sbjct: 105 KLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS-EPHARF-YAAQIVLTFEYLHSL 160
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGYVPSE--- 832
+I+ D+K N+L++ +V+DFG A+ + T T T + E
Sbjct: 161 D----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEALAPEIIL 211
Query: 833 ---YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
Y +A D ++ GV++ E+ G P F
Sbjct: 212 SKGYNKA------VDWWALGVLIYEMAAGYPP----FFADQ 242
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 6e-06
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 25/109 (22%)
Query: 762 KIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA--KVSDFGLARLISDCESHVS 819
K A + FL + IIH D+K NILL + + K+ DFG + + +
Sbjct: 161 KFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ---RIY 216
Query: 820 TDTADTIGYVPSEYGQAGRANE---------RGDIYSFGVILLELVTGK 859
Y+ S + R+ E D++S G IL+E+ TG+
Sbjct: 217 Q-------YIQSRF---YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 48.5 bits (115), Expect = 8e-06
Identities = 60/226 (26%), Positives = 91/226 (40%), Gaps = 50/226 (22%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMV-KHQNL 719
V+G G F KGT + AVK L + D + E L + K L
Sbjct: 348 VLGKGSFGKVMLSERKGT---DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 404
Query: 720 VQLLGYCSVGEEKL-LVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGA--ARGISFLH 775
QL C ++L V EY+ G L + + Y A A G+ FL
Sbjct: 405 TQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAV----FYAAEIAIGLFFLQ 459
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD----TIGYVP 830
G II+ D+K N++L+ K++DFG+ + E+ T T Y+
Sbjct: 460 SKG----IIYRDLKLDNVMLDSEGHIKIADFGMCK-----ENIWDGVTTKTFCGTPDYIA 510
Query: 831 SE------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
E YG++ D ++FGV+L E++ G+ P FE +D
Sbjct: 511 PEIIAYQPYGKS------VDWWAFGVLLYEMLAGQAP----FEGED 546
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 44/215 (20%), Positives = 74/215 (34%), Gaps = 55/215 (25%)
Query: 664 VFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
V V+G G + Q+ A+K L + RE ++V++
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREVELHWRASQ---CPHIVRI 76
Query: 723 LGYC---SVGEEKL-LVYEYMVNGSLDDWLRNR--------AASLDWGKRCKIAYGAARG 770
+ G + L +V E + G L +++R AS +I
Sbjct: 77 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-------EIMKSIGEA 129
Query: 771 ISFLH-HGFKPYIIHMDIKTSNILLNDYFEA---KVSDFGLARLISDCESHVSTDTADTI 826
I +LH I H D+K N+L K++DFG A+
Sbjct: 130 IQYLHSIN----IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET--------------- 170
Query: 827 GYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
+Y ++ D++S GVI+ L+ G P
Sbjct: 171 --TGEKYDKS------CDMWSLGVIMYILLCGYPP 197
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 2e-05
Identities = 49/228 (21%), Positives = 88/228 (38%), Gaps = 52/228 (22%)
Query: 665 FENVIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMVKHQ 717
+G G F + + A+K L + ++ E L +V H
Sbjct: 10 ILRTLGTGSFGRVHLIRSRHN---GRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 718 NLVQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGK----RCKIAYGA--ARG 770
++++ +++ ++ +Y+ G L LR + K Y A
Sbjct: 67 FIIRMW-GTFQDAQQIFMIMDYIEGGELFSLLRKS------QRFPNPVAKF-YAAEVCLA 118
Query: 771 ISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGY 828
+ +LH II+ D+K NILL+ K++DFG A+ + D T T T Y
Sbjct: 119 LEYLHSKD----IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYTLCGTPDY 169
Query: 829 VPSE------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
+ E Y ++ D +SFG+++ E++ G P F D +
Sbjct: 170 IAPEVVSTKPYNKS------IDWWSFGILIYEMLAGYTP----FYDSN 207
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 3e-05
Identities = 50/234 (21%), Positives = 79/234 (33%), Gaps = 57/234 (24%)
Query: 669 IGGGGFRTAFKGTMPDQK------TVAVKKLSQATGQCDREF-----AAEMETLDMVKHQ 717
IG GGF + M + VK G E AA+ E +
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 718 NLVQLLG-----YCSVGEEKLLVYEYMV----NGSLDDWLR--NRAASLDWGKR-CKIAY 765
++ LG + ++ Y +M+ L + S K +++
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSR---KTVLQLSL 159
Query: 766 GAARGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKV--SDFGLARLISDCESHVS--- 819
+ ++H H + +H DIK SN+LLN +V D+GLA H +
Sbjct: 160 RILDILEYIHEHEY----VHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAA 215
Query: 820 ------TDTA-----DT-IGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
T D G PS R RGD+ G +++ +TG P
Sbjct: 216 DPKRCHDGTIEFTSIDAHNGVAPS------R---RGDLEILGYCMIQWLTGHLP 260
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 4e-05
Identities = 25/204 (12%), Positives = 50/204 (24%), Gaps = 54/204 (26%)
Query: 669 IGGGGFRTAFKGTMPDQKTVAVKKLSQAT--------GQCDREFAAEMETLDMV------ 714
IG G F F+ D VA+K ++ + E E+ +
Sbjct: 28 IGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGE 86
Query: 715 ---KHQNLVQLLGYCSV------------------------------GEEKLLVYEYMVN 741
+ + + L V ++ +V E+
Sbjct: 87 VCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFG 146
Query: 742 G-SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA 800
G L+ I + ++ + H D+ N+LL
Sbjct: 147 GIDLEQMRTKL---SSLATAKSILHQLTASLAVAEASLR--FEHRDLHWGNVLLKKTSLK 201
Query: 801 KVSDFGLARLISDCESHVSTDTAD 824
K+ + + + D
Sbjct: 202 KLHYTLNGKSSTIPSCGLQVSIID 225
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 7e-05
Identities = 58/223 (26%), Positives = 89/223 (39%), Gaps = 44/223 (19%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMV-KHQNL 719
++G G F F K T + A+K L + D + E L + +H L
Sbjct: 24 MLGKGSFGKVFLAEFKKT---NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 80
Query: 720 VQLLGYCSVGEEKL-LVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGA--ARGISFLH 775
+ +E L V EY+ G L + L R Y A G+ FLH
Sbjct: 81 THMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS---RATF-YAAEIILGLQFLH 135
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGYVPSE- 832
G I++ D+K NILL+ K++DFG+ + + T+T T Y+ E
Sbjct: 136 SKG----IVYRDLKLDNILLDKDGHIKIADFGMCKE--NMLGDAKTNTFCGTPDYIAPEI 189
Query: 833 -----YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
Y + D +SFGV+L E++ G+ P F +D
Sbjct: 190 LLGQKYNHS------VDWWSFGVLLYEMLIGQSP----FHGQD 222
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 58/226 (25%), Positives = 85/226 (37%), Gaps = 50/226 (22%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDM-VKHQNL 719
VIG G F K + AVK L + +E +E L VKH L
Sbjct: 45 VIGKGSFGKVLLARHKAE---EVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 720 VQLLGYCSVGEEKL-LVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGA--ARGISFLH 775
V L + +KL V +Y+ G L L R R R + Y A A + +LH
Sbjct: 102 VGLH-FSFQTADKLYFVLDYINGGELFYHLQRERCFLEP---RARF-YAAEIASALGYLH 156
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD----TIGYVP 830
I++ D+K NILL+ ++DFGL + E+ T T Y+
Sbjct: 157 SLN----IVYRDLKPENILLDSQGHIVLTDFGLCK-----ENIEHNSTTSTFCGTPEYLA 207
Query: 831 SE------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
E Y + D + G +L E++ G P F ++
Sbjct: 208 PEVLHKQPYDRT------VDWWCLGAVLYEMLYGLPP----FYSRN 243
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 60/226 (26%), Positives = 91/226 (40%), Gaps = 50/226 (22%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMV-KHQNL 719
V+G G F KGT + AVK L + D + E L + K L
Sbjct: 27 VLGKGSFGKVMLSERKGT---DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 83
Query: 720 VQLLGYCSVGEEKL-LVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGA--ARGISFLH 775
QL C ++L V EY+ G L + + Y A A G+ FL
Sbjct: 84 TQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAV----FYAAEIAIGLFFLQ 138
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD----TIGYVP 830
G II+ D+K N++L+ K++DFG+ + E+ T T Y+
Sbjct: 139 SKG----IIYRDLKLDNVMLDSEGHIKIADFGMCK-----ENIWDGVTTKTFCGTPDYIA 189
Query: 831 SE------YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
E YG++ D ++FGV+L E++ G+ P FE +D
Sbjct: 190 PEIIAYQPYGKS------VDWWAFGVLLYEMLAGQAP----FEGED 225
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 59/233 (25%), Positives = 92/233 (39%), Gaps = 53/233 (22%)
Query: 668 VIGGGGFRTAF---KGTMPDQKTV-AVKKLSQATGQCDREFAAEMET----LDMVKHQN- 718
V+G G + F K + D + A+K L +AT + T L+ ++
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 719 LVQLLGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAASLDWGK----RCKIAYGA--ARGI 771
LV L Y E KL L+ +Y+ G L L R + +I Y +
Sbjct: 121 LVTLH-YAFQTETKLHLILDYINGGELFTHLSQR------ERFTEHEVQI-YVGEIVLAL 172
Query: 772 SFLH-HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL-ISDCESHVSTDTADT---- 825
LH G II+ DIK NILL+ ++DFGL++ ++D T+ A
Sbjct: 173 EHLHKLG----IIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD-----ETERAYDFCGT 223
Query: 826 --------IGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
+ S + +A D +S GV++ EL+TG P + E
Sbjct: 224 IEYMAPDIVRGGDSGHDKAV------DWWSLGVLMYELLTGASPFTVDGEKNS 270
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 44/223 (19%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMV-KHQNL 719
V+G G F K T AVK L + D + E L + H L
Sbjct: 30 VLGKGSFGKVMLARVKET---GDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 720 VQLLGYCSVGEEKL-LVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGA--ARGISFLH 775
QL C ++L V E++ G L + ++R R + Y A + FLH
Sbjct: 87 TQLF-CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA---RARF-YAAEIISALMFLH 141
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGYVPSE- 832
G II+ D+K N+LL+ K++DFG+ + + V+T T T Y+ E
Sbjct: 142 DKG----IIYRDLKLDNVLLDHEGHCKLADFGMCKE--GICNGVTTATFCGTPDYIAPEI 195
Query: 833 -----YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
YG A D ++ GV+L E++ G P FE ++
Sbjct: 196 LQEMLYGPA------VDWWAMGVLLYEMLCGHAP----FEAEN 228
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 4e-04
Identities = 53/217 (24%), Positives = 87/217 (40%), Gaps = 46/217 (21%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMV-KHQNL 719
VIG G + K T + A+K + + D + E + H L
Sbjct: 16 VIGRGSYAKVLLVRLKKT---DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 72
Query: 720 VQLLGYCSVGEEKL-LVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGA--ARGISFLH 775
V L C E +L V EY+ G L + R R + + Y A + +++LH
Sbjct: 73 VGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE---HARF-YSAEISLALNYLH 127
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD----TIGYVP 830
G II+ D+K N+LL+ K++D+G+ + E DT T Y+
Sbjct: 128 ERG----IIYRDLKLDNVLLDSEGHIKLTDYGMCK-----EGLRPGDTTSTFCGTPNYIA 178
Query: 831 SE------YGQAGRANERGDIYSFGVILLELVTGKQP 861
E YG + D ++ GV++ E++ G+ P
Sbjct: 179 PEILRGEDYGFS------VDWWALGVLMFEMMAGRSP 209
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 46/217 (21%)
Query: 668 VIGGGGFRTAF----KGTMPDQKTVAVKKLSQATGQCDREFA---AEMETLDMV-KHQNL 719
VIG G + K T + A++ + + D + E + H L
Sbjct: 59 VIGRGSYAKVLLVRLKKT---DRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 115
Query: 720 VQLLGYCSVGEEKL-LVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGA--ARGISFLH 775
V L C E +L V EY+ G L + R R + + Y A + +++LH
Sbjct: 116 VGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE---HARF-YSAEISLALNYLH 170
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD----TIGYVP 830
G II+ D+K N+LL+ K++D+G+ + E DT T Y+
Sbjct: 171 ERG----IIYRDLKLDNVLLDSEGHIKLTDYGMCK-----EGLRPGDTTSTFCGTPNYIA 221
Query: 831 SE------YGQAGRANERGDIYSFGVILLELVTGKQP 861
E YG + D ++ GV++ E++ G+ P
Sbjct: 222 PEILRGEDYGFS------VDWWALGVLMFEMMAGRSP 252
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 58/413 (14%), Positives = 119/413 (28%), Gaps = 86/413 (20%)
Query: 74 QSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLS----VGENQLSGSIP 129
+++ + + NL +L K L + + L L + S +
Sbjct: 12 RAVLAQLGCPIKNLDALENAQAIKKKLGKLGRQVLPPSELLDHLFFHYEFQNQRFSAEV- 70
Query: 130 SQLGLLTRLETISLRSNSFTGEMPSELGDI-----KQLKSLDFSGNGLNGTIPSRLGD-L 183
L+ L ++L T + + + L ++ + L+ L
Sbjct: 71 -----LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVF 125
Query: 184 TQLQDLDLSDNLLS----GSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLY 239
+ + L L N L L LL + ++ L +SNN L+ G + L +
Sbjct: 126 LRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLT-----AAG-VAVLMEG- 178
Query: 240 LGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGP----IPRELCNSGSLVEINLDG 295
+ + + ++SL + L + +L + L E+N+
Sbjct: 179 ------------------LAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAY 220
Query: 296 NMLSGT----IEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPV 351
N T + +L L L N +S + + +L + V
Sbjct: 221 NGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDL------GGAAEGGARVVV 274
Query: 352 SLWNSENLMEFNAA--SNLLEGSLSWE---ISNAVALEKLDLSSNMLTRQIPKKIGNLTN 406
SL + E+ + S + SW+ + + L DL + P +
Sbjct: 275 SLTEGTAVSEYWSVILSEVQRNLNSWDRARVQRHLELLLRDLEDSRGATLNPWRKA---- 330
Query: 407 IQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN--GCVVVVYLLLNNNML 457
Q+L++ + L +
Sbjct: 331 -QLLRVEG---------------EVRALLEQLGSSGSPSGSWSHPQFEKGAGH 367
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 6e-04
Identities = 44/231 (19%), Positives = 73/231 (31%), Gaps = 54/231 (23%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVKKL---SQATGQCDREF-----AAEMETLDMVKHQNL 719
IG GGF + + A + Q G E A+ + + +
Sbjct: 45 IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQ 104
Query: 720 VQLLG-----YCSVGEEKLLVYEYMV----NGSLDD-WLRNRAASLDWGKR-CKIAYGAA 768
+ LG + E K Y +MV L +N ++
Sbjct: 105 LDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKK---STVLQLGIRML 161
Query: 769 RGISFLH-HGFKPYIIHMDIKTSNILLNDYFEAKV--SDFGLARLISDCESHVS------ 819
+ ++H + + +H DIK +N+LL +V +D+GL+ +H
Sbjct: 162 DVLEYIHENEY----VHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPR 217
Query: 820 ---TDTA-----DT-IGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
T D G S R R D+ G +L + GK P
Sbjct: 218 KGHNGTIEFTSLDAHKGVALS------R---RSDVEILGYCMLRWLCGKLP 259
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 6e-04
Identities = 34/160 (21%), Positives = 55/160 (34%), Gaps = 21/160 (13%)
Query: 669 IGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCS 727
IG G F G + + VA+K + + + Q+ +
Sbjct: 17 IGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQ-LGSGDGIPQVYYFGP 75
Query: 728 VGEEKLLVYEYMVNG-SLDDWLR--NRAASLDWGKR-CKIAYGAARGISFLH-HGFKPYI 782
G+ +V E + G SL+D +R SL K IA + ++H
Sbjct: 76 CGKYNAMVLELL--GPSLEDLFDLCDRTFSL---KTVLMIAIQLISRMEYVHSKNL---- 126
Query: 783 IHMDIKTSNILLNDYFEAKVS-----DFGLARLISDCESH 817
I+ D+K N L+ DF LA+ D E+
Sbjct: 127 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK 166
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 885 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.98 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.98 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.98 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.98 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.98 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.98 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.98 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.98 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.98 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.98 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.98 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.98 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.98 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.98 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.98 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.98 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.98 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.98 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.98 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.98 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.98 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.98 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.98 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.98 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.97 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.97 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.97 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.97 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.97 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.97 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.97 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.97 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.97 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.97 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.97 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.97 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.97 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.97 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.97 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.97 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.97 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.97 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.97 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.97 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.97 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.97 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.97 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.97 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.97 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.97 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.97 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.97 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.97 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.97 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.97 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.97 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.97 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.97 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.97 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.97 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.97 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.97 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.97 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.97 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.97 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.97 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.97 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.97 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.97 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.97 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.97 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.97 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.97 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.97 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.97 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.97 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.97 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.97 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.97 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.97 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.97 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.97 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.97 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.97 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.97 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.97 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.97 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.97 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.97 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.97 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.97 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.97 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.97 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.97 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.97 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.97 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.97 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.97 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.97 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.97 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.97 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.97 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.97 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.97 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.97 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.97 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.97 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.97 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.97 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.97 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.97 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.97 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.97 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.97 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.97 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.97 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.97 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.97 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.97 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.97 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.97 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.97 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.97 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.97 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.97 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.97 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.97 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.97 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.97 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.97 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.97 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.97 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.97 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.97 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.97 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.97 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.97 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.97 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.97 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.97 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.97 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.97 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.97 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.97 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.97 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.97 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.97 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.97 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.97 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.97 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.97 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.97 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.96 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.96 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.96 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.96 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.96 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.96 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.96 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.96 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.96 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.96 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.96 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.96 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.96 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.96 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.96 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.96 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.96 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.96 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.96 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.96 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.96 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.96 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.96 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.96 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.96 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.96 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.96 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.96 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.96 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.96 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.95 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.95 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.95 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.95 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.95 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.95 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.95 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.95 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.94 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.94 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.94 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.92 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.92 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.92 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.91 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.91 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.91 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.91 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.91 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.9 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.9 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.9 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.9 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.89 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.89 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.89 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.88 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.88 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.88 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.88 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.87 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.87 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.87 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.87 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.86 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.86 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.86 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.85 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.84 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.84 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.81 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.81 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.81 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.8 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.8 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.8 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.8 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.79 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.78 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.78 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.78 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.78 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.77 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.77 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.77 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.76 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.76 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.74 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.74 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.74 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.72 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.72 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.71 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.71 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.69 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.68 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.67 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.65 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.65 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.65 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.64 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.63 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.6 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.58 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.58 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.56 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.56 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.55 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.54 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.54 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.54 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.53 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.47 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.47 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.45 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.44 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.31 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 99.31 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 99.29 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.28 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.25 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.24 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.18 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 99.05 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.0 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 98.96 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.94 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.83 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.8 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.79 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.64 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.44 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.37 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.35 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.26 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.25 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.19 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.16 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.05 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.02 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.79 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.77 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.77 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.76 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.56 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.47 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.4 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.38 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.0 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.96 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 96.9 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.83 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.83 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 96.63 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 96.63 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.62 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 96.6 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.59 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.29 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.02 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 95.4 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 95.33 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 94.96 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 89.51 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-85 Score=799.77 Aligned_cols=620 Identities=31% Similarity=0.463 Sum_probs=494.7
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcccCCccccCCcEEEEEEeccccccc---ccc-------------
Q 047790 19 TAIDEPKQERRSLVHFKNSLQNPQVLSGWNKTTRHCHWFGVKCRHSRVVSLVIQTQSLKGP---VSP------------- 82 (885)
Q Consensus 19 ~~~~~~~~~~~aLl~~k~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~---~~~------------- 82 (885)
++.++.++||+||++||+++.+|..+++|..++|||+|.||+|+.++|+++++++.++.|. +|+
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~ 84 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFL 84 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEEC
T ss_pred ccccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCC
Confidence 3345678899999999999988668999998899999999999978999999999999887 554
Q ss_pred ----------cccCCCCCCEEecCCCcccCcCCc--CccCcCCCCEEeccCCcCCCCCCccc-cccccccEeeeeccCCC
Q 047790 83 ----------FLFNLSSLRILDLSKNLLFGQLSP--QVSNLKRLKMLSVGENQLSGSIPSQL-GLLTRLETISLRSNSFT 149 (885)
Q Consensus 83 ----------~l~~l~~L~~L~Ls~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~ 149 (885)
.++.+++|++|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+ ..+++|++|+|++|+++
T Consensus 85 ~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 164 (768)
T 3rgz_A 85 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164 (768)
T ss_dssp TTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCE
T ss_pred cCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccC
Confidence 566777888888888888877777 78888888888888888877777665 67777777777777777
Q ss_pred CCCCcc---ccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCC
Q 047790 150 GEMPSE---LGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIP 226 (885)
Q Consensus 150 ~~~p~~---l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p 226 (885)
+..|.. ++++++|++|++++|++++..| +..+++|++|+|++|++++.+|. ++++++|++|++++|++++.+|
T Consensus 165 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~--l~~l~~L~~L~Ls~n~l~~~~~ 240 (768)
T 3rgz_A 165 GANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFS 240 (768)
T ss_dssp EETHHHHHHTTCCTTCCEEECCSSEEESCCB--CTTCTTCCEEECCSSCCCSCCCB--CTTCCSCCEEECCSSCCCSCHH
T ss_pred CcCChhhhhhccCCCCCEEECCCCcccccCC--cccCCcCCEEECcCCcCCCCCcc--cccCCCCCEEECcCCcCCCccc
Confidence 666655 5666666666666666655443 25666777777777777655554 6667777777777777776677
Q ss_pred ccccCCCcccceecccccccc-----------------cccccccCccccCC-CCCcEEEecCCcccccccccccCCCCC
Q 047790 227 PEIGNLKKLSDLYLGIGPYQL-----------------SLFVGRITPEIGNC-SMLKYISLSNNKLSGPIPRELCNSGSL 288 (885)
Q Consensus 227 ~~~~~l~~L~~L~l~~n~~~~-----------------~~~~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L 288 (885)
..+.++++|++|+++.|.... ..+.+.+|..+... ++|++|++++|++++.+|..+..+++|
T Consensus 241 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L 320 (768)
T 3rgz_A 241 RAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLL 320 (768)
T ss_dssp HHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTC
T ss_pred HHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCc
Confidence 777777777777766554321 01134556665553 777777777777777777777777777
Q ss_pred cEEEccCCCCcCccccc-ccccCCcceeeccccccCCCCCcccCCC--CceeEEeecCccccccCccccC--ccccceee
Q 047790 289 VEINLDGNMLSGTIEDV-FDRCTNLSELVLVNNRISGSIPEYISEL--PLKVFDLQYNNFTGVIPVSLWN--SENLMEFN 363 (885)
Q Consensus 289 ~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~ 363 (885)
++|+|++|.+++.+|.. +..+++|++|++++|++++.+|..+... .|++|++++|++++.+|..+.. +++|++|+
T Consensus 321 ~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~ 400 (768)
T 3rgz_A 321 ESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400 (768)
T ss_dssp CEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEE
T ss_pred cEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEE
Confidence 77777777776555543 6777777777777777776677666544 5777777777777777776665 67788888
Q ss_pred cccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCc
Q 047790 364 AASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNG 443 (885)
Q Consensus 364 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 443 (885)
+++|.+.+.+|..+.++++|++|+|++|++++.+|..+..+++|+.|++++|++++.+|..+..+++|++|++++|++++
T Consensus 401 L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 480 (768)
T 3rgz_A 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480 (768)
T ss_dssp CCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred CCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccC
Confidence 88888888888888888889999999998888888888888889999999999888888888888899999999998887
Q ss_pred cee--------EEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceecccccccc
Q 047790 444 CVV--------VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGY 515 (885)
Q Consensus 444 ~~~--------~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 515 (885)
.++ ++.|++++|++++.+|.+++.+++|++|+|++|+++|.+|..++.+++|+.|++++|+++|.+|..+..
T Consensus 481 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~ 560 (768)
T 3rgz_A 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGT
T ss_pred cCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhc
Confidence 654 367889999999899999999999999999999999889999999999999999999999888865432
Q ss_pred ------------------------------------------------------ccCCccCCCCCccccccccCcEEEcc
Q 047790 516 ------------------------------------------------------LSGNKLYGSVPTSFGNLNGLTHLDLS 541 (885)
Q Consensus 516 ------------------------------------------------------ls~n~l~~~~p~~~~~l~~L~~L~Ls 541 (885)
++.|.+.|.+|..|+.+++|+.|||+
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs 640 (768)
T 3rgz_A 561 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 640 (768)
T ss_dssp TTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECC
T ss_pred ccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECc
Confidence 12366777788889999999999999
Q ss_pred CCCCCC-----------ceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCC
Q 047790 542 CNELDG-----------IVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEV 610 (885)
Q Consensus 542 ~N~l~~-----------~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~ 610 (885)
+|++++ +..+++++|+++|.||.+++++++|++|||++|+++|.||..+..+++|++||+++|+|+|.+
T Consensus 641 ~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~i 720 (768)
T 3rgz_A 641 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 720 (768)
T ss_dssp SSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEEC
T ss_pred CCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccC
Confidence 998864 446899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccccccccCCccccccccCCcccccc
Q 047790 611 PRSGICQNLSIISLTGNKDLCEKIMGSDCQILT 643 (885)
Q Consensus 611 p~~~~~~~~~~~~~~~N~~~c~~~~~~~c~~~~ 643 (885)
|..++++++...+|.|||++||.|++ .|....
T Consensus 721 P~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~~ 752 (768)
T 3rgz_A 721 PEMGQFETFPPAKFLNNPGLCGYPLP-RCDPSN 752 (768)
T ss_dssp CSSSSGGGSCGGGGCSCTEEESTTSC-CCCSCC
T ss_pred CCchhhccCCHHHhcCCchhcCCCCc-CCCCCc
Confidence 99999999999999999999999998 797543
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-66 Score=633.22 Aligned_cols=532 Identities=31% Similarity=0.449 Sum_probs=444.5
Q ss_pred CCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCc--cccccccccEeeeeccCCCCCCCccc-cCCccCc
Q 047790 87 LSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPS--QLGLLTRLETISLRSNSFTGEMPSEL-GDIKQLK 163 (885)
Q Consensus 87 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~ 163 (885)
|++|+.++++.|.+. .+|+.|+++++|++|+|++|.++|.+|. .++.+++|++|+|++|.+++.+|..+ .++++|+
T Consensus 76 L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 154 (768)
T 3rgz_A 76 LTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLE 154 (768)
T ss_dssp CTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCS
T ss_pred cCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCC
Confidence 445555666665553 2558899999999999999999999998 99999999999999999998888876 8999999
Q ss_pred eEEccCCcCCccCCcc---cCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceec
Q 047790 164 SLDFSGNGLNGTIPSR---LGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYL 240 (885)
Q Consensus 164 ~L~Ls~N~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 240 (885)
+|+|++|++++..|.. +.++++|++|++++|.+++.+| +..+++|++|++++|++++.+|. ++++++|++|++
T Consensus 155 ~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~L 230 (768)
T 3rgz_A 155 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD---VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDI 230 (768)
T ss_dssp EEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB---CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEEC
T ss_pred EEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC---cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEEC
Confidence 9999999999888877 8899999999999999997666 37899999999999999988887 999999999999
Q ss_pred ccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCccccccccc-CCcceeeccc
Q 047790 241 GIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRC-TNLSELVLVN 319 (885)
Q Consensus 241 ~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~ 319 (885)
+.|.. .+.+|..++.+++|++|++++|++++.+|.. .+++|++|+|++|.+++.+|..+... ++|++|++++
T Consensus 231 s~n~l-----~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~ 303 (768)
T 3rgz_A 231 SGNKL-----SGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSG 303 (768)
T ss_dssp CSSCC-----CSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCS
T ss_pred cCCcC-----CCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcC
Confidence 76653 4567888899999999999999998877765 77888888888888887777776554 8888888888
Q ss_pred cccCCCCCcccCCC-CceeEEeecCccccccCcc-ccCccccceeecccccccCCCcccccccc-cccEEEccCCccccc
Q 047790 320 NRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVS-LWNSENLMEFNAASNLLEGSLSWEISNAV-ALEKLDLSSNMLTRQ 396 (885)
Q Consensus 320 N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~ 396 (885)
|++++.+|..+..+ .|++|++++|++++.+|.. +..+++|++|++++|.+.+.+|..+..++ +|++|++++|++++.
T Consensus 304 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~ 383 (768)
T 3rgz_A 304 NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGP 383 (768)
T ss_dssp SEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEE
T ss_pred CcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCC
Confidence 88888888887777 6888888888888777765 78888888888888888888888888776 788888888888877
Q ss_pred Ccccccc--cccccceecccccccCcCCCccCCCCcccEEEcCCcccCccee--------EEEEeecCCcccCCCchhcc
Q 047790 397 IPKKIGN--LTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVV--------VVYLLLNNNMLSGKIPGSLS 466 (885)
Q Consensus 397 ~p~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~l~l~~n~l~~~~p~~l~ 466 (885)
+|..+.. +++|++|++++|++++.+|..+.++++|++|++++|++++.++ ++.|++++|.+++.+|..+.
T Consensus 384 ~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~ 463 (768)
T 3rgz_A 384 ILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 463 (768)
T ss_dssp CCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred cChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHc
Confidence 7777766 6778888888888887788888888888888888887776544 35677888888888888888
Q ss_pred cCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccc--------cccCCccCCCCCccccccccCcEE
Q 047790 467 RLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG--------YLSGNKLYGSVPTSFGNLNGLTHL 538 (885)
Q Consensus 467 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--------~ls~n~l~~~~p~~~~~l~~L~~L 538 (885)
.+++|++|++++|++++.+|..+.++++|+.|++++|+++|.+|..++ ++++|++++.+|..++.+++|+.|
T Consensus 464 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 543 (768)
T 3rgz_A 464 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWL 543 (768)
T ss_dssp GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEE
T ss_pred CCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEE
Confidence 888888888888888877888888888888888888888887777655 356788887888888888888888
Q ss_pred EccCCCCC------------------------------------------------------------------------
Q 047790 539 DLSCNELD------------------------------------------------------------------------ 546 (885)
Q Consensus 539 ~Ls~N~l~------------------------------------------------------------------------ 546 (885)
+|++|+++
T Consensus 544 ~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~ 623 (768)
T 3rgz_A 544 DLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGH 623 (768)
T ss_dssp ECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEE
T ss_pred ECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceeccc
Confidence 88877654
Q ss_pred ---------CceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC-ccc
Q 047790 547 ---------GIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GIC 616 (885)
Q Consensus 547 ---------~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~ 616 (885)
.+..+++++|+++|.||.+++++++|++|+|++|+++|.||..++++++|++|||++|+++|.+|.. ..+
T Consensus 624 ~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp CCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred CchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCC
Confidence 2345888999999999999999999999999999999999999999999999999999999988865 677
Q ss_pred cccccccccCCccc
Q 047790 617 QNLSIISLTGNKDL 630 (885)
Q Consensus 617 ~~~~~~~~~~N~~~ 630 (885)
..++.+++++|+..
T Consensus 704 ~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 704 TMLTEIDLSNNNLS 717 (768)
T ss_dssp CCCSEEECCSSEEE
T ss_pred CCCCEEECcCCccc
Confidence 88999999999854
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-61 Score=579.32 Aligned_cols=558 Identities=24% Similarity=0.243 Sum_probs=371.7
Q ss_pred cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee
Q 047790 65 RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 144 (885)
+++.|+++++.+++..+..+.++++|++|||++|.+++..|..|+++++|++|+|++|++++..+..|+.+++|++|+|+
T Consensus 26 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 105 (680)
T 1ziw_A 26 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLM 105 (680)
T ss_dssp TCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECC
Confidence 78999999999998777789999999999999999999999999999999999999999996666689999999999999
Q ss_pred ccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCccccc--ccccccEEEeecccCc
Q 047790 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLK--NLQSLSYLDVSNNLLS 222 (885)
Q Consensus 145 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~l~~L~~L~Ls~N~l~ 222 (885)
+|++++..|..|+++++|++|+|++|++++..|..++++++|++|++++|++++ ++...+. .+++|++|++++|+++
T Consensus 106 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 106 SNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQA-LKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp SSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCC-BCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccc-cCHHHhhccccccccEEECCCCccc
Confidence 999998778899999999999999999999889999999999999999999984 5544344 4589999999999999
Q ss_pred ccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCC--CcEEEccCCCCcC
Q 047790 223 GNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGS--LVEINLDGNMLSG 300 (885)
Q Consensus 223 ~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~--L~~L~L~~N~l~~ 300 (885)
+..|..+..+++|+.+++..+...... ...++..+ ..++|+.|++++|++++..|..+..+.. |++|+|++|.+++
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~-~~~~~~~l-~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSL-TEKLCLEL-ANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHH-HHHHHHHH-TTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCE
T ss_pred ccChhhhhhhhhhhhhhccccccChhh-HHHHHHHh-hhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCc
Confidence 999999998888888777544322111 01111111 2345666666666666555555555433 6666666666665
Q ss_pred cccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCcccc-----ccC----ccccCccccceeeccccccc
Q 047790 301 TIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTG-----VIP----VSLWNSENLMEFNAASNLLE 370 (885)
Q Consensus 301 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~-----~~p----~~~~~l~~L~~L~l~~N~l~ 370 (885)
.++..|..+++|++|++++|++.+..|..+..+ .|++|++++|...+ .+| ..|..+++|++|++++|.+.
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 555555666666666666666665555555554 45555555544332 111 14455555556666655555
Q ss_pred CCCcccccccccccEEEccCCcccc--cCccccccc--ccccceecccccccCcCCCccCCCCcccEEEcCCcccCccee
Q 047790 371 GSLSWEISNAVALEKLDLSSNMLTR--QIPKKIGNL--TNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVV 446 (885)
Q Consensus 371 ~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 446 (885)
+..+..|.++++|++|++++|.++. ..+..|..+ ++|+.|++++|+++++.|..|..+++|++|++++|++++.++
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 422 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECC
T ss_pred CCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccC
Confidence 5555555555555555555554321 112223222 355555555555555555555555555555555555543221
Q ss_pred ---------EEEEeecCCcccCCCchhcccCCCCCEEeccCcccc--CCCCCCcccccccceeeeccccceeccccccc-
Q 047790 447 ---------VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT--GSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG- 514 (885)
Q Consensus 447 ---------~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~- 514 (885)
++.+++++|.+.+..+..+..+++|+.|++++|.++ +.+|..|..+++|+.|++++|++++..|..+.
T Consensus 423 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~ 502 (680)
T 1ziw_A 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG 502 (680)
T ss_dssp SGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcc
Confidence 234444444444444444444555555555555443 33444455555555555555554432211111
Q ss_pred -------cccCCccCCC--------CCccccccccCcEEEccCCCCCCceeeeecccccccccch-hccCcccccccccc
Q 047790 515 -------YLSGNKLYGS--------VPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPP-ELGNLVQLEYLDFS 578 (885)
Q Consensus 515 -------~ls~n~l~~~--------~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~-~~~~l~~L~~L~Ls 578 (885)
++++|++++. .+..|..+++|+.|+|+ +|+++ .+|. .|.++++|++|||+
T Consensus 503 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~-------------~N~l~-~i~~~~~~~l~~L~~L~Ls 568 (680)
T 1ziw_A 503 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLE-------------SNGFD-EIPVEVFKDLFELKIIDLG 568 (680)
T ss_dssp CTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECC-------------SSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred ccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECC-------------CCCCC-CCCHHHcccccCcceeECC
Confidence 0112222111 11235556666666666 55555 5665 58999999999999
Q ss_pred cccCCCCCCccccCccccceeecccCcCCCCCCCCc--cccccccccccCCccccccccCCcccc-cccc
Q 047790 579 MNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSG--ICQNLSIISLTGNKDLCEKIMGSDCQI-LTFG 645 (885)
Q Consensus 579 ~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~--~~~~~~~~~~~~N~~~c~~~~~~~c~~-~~~~ 645 (885)
+|++++..|..+..+++|++|++++|+|++.+|... .+.+++.+++.+|||.| +|.. .|+.
T Consensus 569 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c------~c~~~~~~~ 632 (680)
T 1ziw_A 569 LNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDC------TCESIAWFV 632 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCB------CCCCCSSEE
T ss_pred CCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCccc------CCccHHHHH
Confidence 999996556667899999999999999999777542 57889999999999999 8985 6654
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-59 Score=552.58 Aligned_cols=500 Identities=25% Similarity=0.247 Sum_probs=390.9
Q ss_pred CCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEcc
Q 047790 89 SLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168 (885)
Q Consensus 89 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 168 (885)
++++|||++|.+++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|+++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 56777777777776666677777777777777777776666777777777777777777776666677777777777777
Q ss_pred CCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCccc--ceeccccccc
Q 047790 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLS--DLYLGIGPYQ 246 (885)
Q Consensus 169 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~--~L~l~~n~~~ 246 (885)
+|++++..|..|+++++|++|++++|+++ .++...+..+++|++|++++|++++..|..++.+++|+ .|+++.|..
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l- 191 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHIS-SIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI- 191 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCC-CCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC-
T ss_pred ccCcccCCcchhccCCcccEEECCCCccc-ccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc-
Confidence 77777655666777777777777777776 33222234467777777777777766666677777776 555544432
Q ss_pred ccccccccCccccCCCCCcEEEecCCccc--------------------------ccccccccCCC--CCcEEEccCCCC
Q 047790 247 LSLFVGRITPEIGNCSMLKYISLSNNKLS--------------------------GPIPRELCNSG--SLVEINLDGNML 298 (885)
Q Consensus 247 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~--------------------------~~~p~~l~~l~--~L~~L~L~~N~l 298 (885)
..+++......+|+.|++++|... ...+..+..+. +|+.|++++|.+
T Consensus 192 -----~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l 266 (606)
T 3t6q_A 192 -----AGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYF 266 (606)
T ss_dssp -----CEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCC
T ss_pred -----CccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCcc
Confidence 123333333456666666665411 11122222222 789999999999
Q ss_pred cCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcc-c
Q 047790 299 SGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSW-E 376 (885)
Q Consensus 299 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~ 376 (885)
++.++..|..+++|++|++++|+++ .+|..+..+ .|++|++++|++++..|..+..+++|++|++++|.+.+.++. .
T Consensus 267 ~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (606)
T 3t6q_A 267 FNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGC 345 (606)
T ss_dssp SSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSST
T ss_pred CccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhh
Confidence 9999999999999999999999998 567667666 799999999999999899999999999999999999866654 4
Q ss_pred ccccccccEEEccCCcccccC--cccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecC
Q 047790 377 ISNAVALEKLDLSSNMLTRQI--PKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNN 454 (885)
Q Consensus 377 ~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~ 454 (885)
+..+++|++|++++|++++.. |..+..+++|++|++++|.+++..|..|..+++|++|++++|+++
T Consensus 346 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~------------ 413 (606)
T 3t6q_A 346 LENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK------------ 413 (606)
T ss_dssp TTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE------------
T ss_pred hhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC------------
Confidence 889999999999999998776 778999999999999999999888999999999999999999885
Q ss_pred CcccCCC-chhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccc
Q 047790 455 NMLSGKI-PGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLN 533 (885)
Q Consensus 455 n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~ 533 (885)
+.. +..+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..+ ..+..+..++
T Consensus 414 ----~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-------------~~~~~~~~l~ 476 (606)
T 3t6q_A 414 ----VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNI-------------QKTNSLQTLG 476 (606)
T ss_dssp ----CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEE-------------CSSCGGGGCT
T ss_pred ----CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCcccc-------------ccchhhccCC
Confidence 233 3458899999999999999999899999999999999999999986321 1256789999
Q ss_pred cCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC
Q 047790 534 GLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS 613 (885)
Q Consensus 534 ~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~ 613 (885)
+|+.|+|++|++ ++..|..++++++|++|+|++|++++.+|..+.+++.| +|++++|++++.+|..
T Consensus 477 ~L~~L~Ls~n~l-------------~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~ 542 (606)
T 3t6q_A 477 RLEILVLSFCDL-------------SSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSL 542 (606)
T ss_dssp TCCEEECTTSCC-------------CEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGG
T ss_pred CccEEECCCCcc-------------CccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhh
Confidence 999999995554 55668899999999999999999999999999999999 9999999999987764
Q ss_pred -ccccccccccccCCccccccccCCcccccccc
Q 047790 614 -GICQNLSIISLTGNKDLCEKIMGSDCQILTFG 645 (885)
Q Consensus 614 -~~~~~~~~~~~~~N~~~c~~~~~~~c~~~~~~ 645 (885)
..+.+++.+++.+||+.| +|...|+.
T Consensus 543 ~~~l~~L~~L~l~~N~~~c------~c~~~~~~ 569 (606)
T 3t6q_A 543 LPILSQQRTINLRQNPLDC------TCSNIYFL 569 (606)
T ss_dssp HHHHHTSSEEECTTCCEEC------SGGGHHHH
T ss_pred cccCCCCCEEeCCCCCccc------cCCcHHHH
Confidence 667889999999999999 89866543
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-59 Score=550.65 Aligned_cols=487 Identities=18% Similarity=0.254 Sum_probs=344.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCCC---------CCCCCCCCCCccc---CCccccCC-cEEEEEEecccccccccccccCCC
Q 047790 22 DEPKQERRSLVHFKNSLQNPQV---------LSGWNKTTRHCHW---FGVKCRHS-RVVSLVIQTQSLKGPVSPFLFNLS 88 (885)
Q Consensus 22 ~~~~~~~~aLl~~k~~~~~~~~---------~~~w~~~~~~c~w---~gv~c~~~-~v~~l~l~~~~l~g~~~~~l~~l~ 88 (885)
.....|++||.+||+++.++.+ ..+|+.++|||.| .||+|+.. ||++|+++++++.|.+|+++++|+
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCT
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCc
Confidence 3455799999999999876432 3489989999999 99999765 999999999999999999999999
Q ss_pred CCCEEecCCCcc------cC------cCCcCccCcCCCCEEeccCCcCCCCCCccccc-cccccEeeee-----------
Q 047790 89 SLRILDLSKNLL------FG------QLSPQVSNLKRLKMLSVGENQLSGSIPSQLGL-LTRLETISLR----------- 144 (885)
Q Consensus 89 ~L~~L~Ls~n~l------~~------~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~Ls----------- 144 (885)
+|++|||++|.+ .+ .+|+.. +..|+ +++++|.+.+.+|..+.. +..+..+++.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 999999999976 33 344433 56677 888888888888877763 2333333333
Q ss_pred ---------ccCCCCCCCccccCCccCceEEccCCcCCcc-----------------CCcccC--CCCCCcccccccccc
Q 047790 145 ---------SNSFTGEMPSELGDIKQLKSLDFSGNGLNGT-----------------IPSRLG--DLTQLQDLDLSDNLL 196 (885)
Q Consensus 145 ---------~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N~l 196 (885)
.|++++ +|.+++++++|++|+|++|++++. +|..++ ++++|++|+|++|++
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 455555 566666666666666666666653 555555 556666666666655
Q ss_pred CCCCCcccccccccccEEEeeccc-Ccc-cCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcc
Q 047790 197 SGSLPVSLLKNLQSLSYLDVSNNL-LSG-NIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKL 274 (885)
Q Consensus 197 ~~~~p~~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 274 (885)
.+.+|.. +.++++|++|++++|+ ++| .+|..++++. .+..+++|++|++++|++
T Consensus 262 ~~~~p~~-l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~-----------------------~~~~l~~L~~L~L~~n~l 317 (636)
T 4eco_A 262 LTKLPTF-LKALPEMQLINVACNRGISGEQLKDDWQALA-----------------------DAPVGEKIQIIYIGYNNL 317 (636)
T ss_dssp CSSCCTT-TTTCSSCCEEECTTCTTSCHHHHHHHHHHHH-----------------------HSGGGGTCCEEECCSSCC
T ss_pred CccChHH-HhcCCCCCEEECcCCCCCccccchHHHHhhh-----------------------ccccCCCCCEEECCCCcC
Confidence 5555543 5555556666666555 554 4554444330 001125666666666666
Q ss_pred cccccc--cccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-C-ceeEEeecCccccccC
Q 047790 275 SGPIPR--ELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-P-LKVFDLQYNNFTGVIP 350 (885)
Q Consensus 275 ~~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~-L~~L~Ls~N~l~~~~p 350 (885)
+ .+|. .+..+++|++|++++|+++|.+| .|..+++|++|++++|+++ .+|..+..+ . |++|++++|+++ .+|
T Consensus 318 ~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp 393 (636)
T 4eco_A 318 K-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIP 393 (636)
T ss_dssp S-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCC
T ss_pred C-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccc
Confidence 6 5565 66666666666666666665555 5666666666666666666 455555444 4 666666666666 455
Q ss_pred ccccCcc--ccceeecccccccCCCccccc-------ccccccEEEccCCcccccCcccccccccccceecccccccCcC
Q 047790 351 VSLWNSE--NLMEFNAASNLLEGSLSWEIS-------NAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGII 421 (885)
Q Consensus 351 ~~~~~l~--~L~~L~l~~N~l~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 421 (885)
..+.... +|+.|++++|.+.+..|..+. .+++|++|+|++|+++...+..+..+++|+.|+|++|+++.+.
T Consensus 394 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~ 473 (636)
T 4eco_A 394 NIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIP 473 (636)
T ss_dssp SCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCC
T ss_pred hhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcC
Confidence 5555443 677777777777777666666 6678888888888888554555666888888888888888433
Q ss_pred CCccCCC-------CcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcc--cCCCCCEEeccCccccCCCCCCcccc
Q 047790 422 PMEFGDC-------ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLS--RLTNLTTLNLFGNLLTGSIPPEFGDS 492 (885)
Q Consensus 422 p~~~~~l-------~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~--~l~~L~~L~Ls~N~l~~~~p~~~~~l 492 (885)
+..+... ++|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+
T Consensus 474 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-----------------~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l 535 (636)
T 4eco_A 474 KNSLKDENENFKNTYLLTSIDLRFNKLT-----------------KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNS 535 (636)
T ss_dssp SSSSEETTEECTTGGGCCEEECCSSCCC-----------------BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGC
T ss_pred HHHhccccccccccCCccEEECcCCcCC-----------------ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcC
Confidence 3333333 28889998888885 6777776 88999999999999987 88889999
Q ss_pred cccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccc
Q 047790 493 LKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQL 572 (885)
Q Consensus 493 ~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L 572 (885)
++|+.|+|++|+ ++++|++.+.+|..|+.+++|+.|+|++|+++ .||..+. ++|
T Consensus 536 ~~L~~L~Ls~N~----------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~--------------~ip~~~~--~~L 589 (636)
T 4eco_A 536 STLKGFGIRNQR----------DAQGNRTLREWPEGITLCPSLTQLQIGSNDIR--------------KVNEKIT--PNI 589 (636)
T ss_dssp SSCCEEECCSCB----------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC--------------BCCSCCC--TTC
T ss_pred CCCCEEECCCCc----------ccccCcccccChHHHhcCCCCCEEECCCCcCC--------------ccCHhHh--CcC
Confidence 999999998876 34677777888999999999999999966654 6777765 799
Q ss_pred cccccccccCCC
Q 047790 573 EYLDFSMNMLDG 584 (885)
Q Consensus 573 ~~L~Ls~N~l~~ 584 (885)
++|||++|++..
T Consensus 590 ~~L~Ls~N~l~~ 601 (636)
T 4eco_A 590 SVLDIKDNPNIS 601 (636)
T ss_dssp CEEECCSCTTCE
T ss_pred CEEECcCCCCcc
Confidence 999999998763
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-56 Score=549.39 Aligned_cols=520 Identities=23% Similarity=0.242 Sum_probs=394.3
Q ss_pred EEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCC-CccccccccccEeeeeccCC
Q 047790 70 VIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSI-PSQLGLLTRLETISLRSNSF 148 (885)
Q Consensus 70 ~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l 148 (885)
+.++++++ .+|. -.++|++|||++|.+++..|..|+++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+
T Consensus 10 dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l 85 (844)
T 3j0a_A 10 FYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKI 85 (844)
T ss_dssp EESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCC
T ss_pred EccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcC
Confidence 44455555 3454 3467788888888887777778888888888888888655555 67778888888888888888
Q ss_pred CCCCCccccCCccCceEEccCCcCCccCCcc--cCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCC
Q 047790 149 TGEMPSELGDIKQLKSLDFSGNGLNGTIPSR--LGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIP 226 (885)
Q Consensus 149 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p 226 (885)
++..|.+|+++++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..+...|+++++|++|++++|.+++..|
T Consensus 86 ~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~ 165 (844)
T 3j0a_A 86 YFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCE 165 (844)
T ss_dssp CEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCS
T ss_pred cccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCH
Confidence 8777788888888888888888887655554 77888888888888888755454557778888888888888877777
Q ss_pred ccccCC--CcccceecccccccccccccccCccccCCCC------CcEEEecCCcccccccccccCC---CCCcEEEcc-
Q 047790 227 PEIGNL--KKLSDLYLGIGPYQLSLFVGRITPEIGNCSM------LKYISLSNNKLSGPIPRELCNS---GSLVEINLD- 294 (885)
Q Consensus 227 ~~~~~l--~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~------L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~L~- 294 (885)
..+..+ ++|+.|+++.|.. .+..|..++.+++ |++|++++|++++..|..+... .+++.+.++
T Consensus 166 ~~l~~l~~~~L~~L~L~~n~l-----~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~ 240 (844)
T 3j0a_A 166 HELEPLQGKTLSFFSLAANSL-----YSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAH 240 (844)
T ss_dssp GGGHHHHHCSSCCCEECCSBS-----CCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCS
T ss_pred HHcccccCCccceEECCCCcc-----ccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccc
Confidence 777776 7788888765543 3344555555444 8888888888887777766543 466777766
Q ss_pred --------CCCCcCccccccccc--CCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceee
Q 047790 295 --------GNMLSGTIEDVFDRC--TNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFN 363 (885)
Q Consensus 295 --------~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 363 (885)
.+.+.+.....|.++ ++|+.|++++|.+.+..|..+..+ .|+.|+|++|++++..|..|..+++|++|+
T Consensus 241 ~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 320 (844)
T 3j0a_A 241 HIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLN 320 (844)
T ss_dssp SCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEE
T ss_pred ccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEE
Confidence 334444455555554 678888888888887777777776 688888888888888888888888888888
Q ss_pred cccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCc
Q 047790 364 AASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNG 443 (885)
Q Consensus 364 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 443 (885)
+++|.+.+..+..|..+++|++|++++|++++..+..|..+++|+.|+|++|.++++ + .+++|+.|++++|+++.
T Consensus 321 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~~N~l~~ 395 (844)
T 3j0a_A 321 LSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFLSGNKLVT 395 (844)
T ss_dssp EESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEEESCCCCC
T ss_pred CCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhccCCCCccc
Confidence 888888888788888888888888888888877777788888888888888888743 2 26778888888888875
Q ss_pred cee----EEEEeecCCcccCC-CchhcccCCCCCEEeccCccccCCCCC-Ccccccccceeeeccccceecccccccccc
Q 047790 444 CVV----VVYLLLNNNMLSGK-IPGSLSRLTNLTTLNLFGNLLTGSIPP-EFGDSLKVQGLYLGHNQLTGSIPESLGYLS 517 (885)
Q Consensus 444 ~~~----~~~l~l~~n~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls 517 (885)
.+. ...+++++|.+++. .+..+.++++|+.|+|++|++++..+. .+..+++|+.|++++|.+++..+.
T Consensus 396 l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~------ 469 (844)
T 3j0a_A 396 LPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWET------ 469 (844)
T ss_dssp CCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCS------
T ss_pred ccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcccccccc------
Confidence 443 35677888888764 334567899999999999999965544 456688999999999999844321
Q ss_pred CCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccc
Q 047790 518 GNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLL 597 (885)
Q Consensus 518 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~ 597 (885)
+..|..|..+++|+.|+|+ +|++++..|..+.++++|++|+|++|+|++..|..+. ++|+
T Consensus 470 -----~~~~~~~~~l~~L~~L~Ls-------------~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~ 529 (844)
T 3j0a_A 470 -----ELCWDVFEGLSHLQVLYLN-------------HNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLE 529 (844)
T ss_dssp -----CCCSSCSSCBCCEECCCCC-------------HHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCC
T ss_pred -----ccchhhhcCcccccEEECC-------------CCcccccChhHccchhhhheeECCCCCCCccChhhhh--cccc
Confidence 2336778899999999999 5556666778889999999999999999976666555 8999
Q ss_pred eeecccCcCCCCCCCCccccccccccccCCcccc
Q 047790 598 YLNLADNRLEGEVPRSGICQNLSIISLTGNKDLC 631 (885)
Q Consensus 598 ~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c 631 (885)
+|++++|+|++.+|.. +.++..+++++|||.|
T Consensus 530 ~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C 561 (844)
T 3j0a_A 530 ILDISRNQLLAPNPDV--FVSLSVLDITHNKFIC 561 (844)
T ss_dssp EEEEEEECCCCCCSCC--CSSCCEEEEEEECCCC
T ss_pred EEECCCCcCCCCChhH--hCCcCEEEecCCCccc
Confidence 9999999999988854 5688899999999999
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-57 Score=535.86 Aligned_cols=499 Identities=20% Similarity=0.193 Sum_probs=437.1
Q ss_pred cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee
Q 047790 65 RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 144 (885)
.++.|+++++.+++..|..+.++++|++|||++|.+++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 68899999999998878899999999999999999999999999999999999999999998889999999999999999
Q ss_pred ccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCccccccccccc--EEEeecccCc
Q 047790 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLS--YLDVSNNLLS 222 (885)
Q Consensus 145 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~--~L~Ls~N~l~ 222 (885)
+|++++..|..++.+++|++|++++|++++..+..+..+++|++|++++|+++ .++...++.+++|+ .|++++|+++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIH-YLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCC-EECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccc-ccChhhhhhhcccceeEEecCCCccC
Confidence 99999877888999999999999999999755455666999999999999998 56666689999999 8999999999
Q ss_pred ccCCccccCCCcccceeccccccccc--------------------ccccccC-ccccCCC--CCcEEEecCCccccccc
Q 047790 223 GNIPPEIGNLKKLSDLYLGIGPYQLS--------------------LFVGRIT-PEIGNCS--MLKYISLSNNKLSGPIP 279 (885)
Q Consensus 223 ~~~p~~~~~l~~L~~L~l~~n~~~~~--------------------~~~~~~~-~~l~~l~--~L~~L~Ls~N~l~~~~p 279 (885)
+..|..+.. .+|+.|+++.+..... .....++ ..+..+. +|+.|++++|++++..+
T Consensus 193 ~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 193 GIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp EECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred ccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 877776654 6788888865531000 0000111 1122222 79999999999999888
Q ss_pred ccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCc-cccCcc
Q 047790 280 RELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPV-SLWNSE 357 (885)
Q Consensus 280 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~-~~~~l~ 357 (885)
..|..+++|++|++++|.++. +|..+..+++|++|++++|++++..|..+..+ .|++|++++|.+.+.+|. .+..++
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~~-lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCSC-CCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccCC-CChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 889999999999999999994 56678999999999999999998888888777 799999999999976665 488999
Q ss_pred ccceeecccccccCCC--cccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCC-ccCCCCcccEE
Q 047790 358 NLMEFNAASNLLEGSL--SWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPM-EFGDCISLNTL 434 (885)
Q Consensus 358 ~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L 434 (885)
+|++|++++|.+.+.. +..+..+++|++|++++|++++..|..|..+++|+.|++++|++++..|. .+..+++|++|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 9999999999999876 77899999999999999999999999999999999999999999987665 49999999999
Q ss_pred EcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCC---CCCCcccccccceeeeccccceecccc
Q 047790 435 DLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS---IPPEFGDSLKVQGLYLGHNQLTGSIPE 511 (885)
Q Consensus 435 ~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 511 (885)
++++|.++ +..|..+..+++|++|++++|++++. .+..+..+++|+.|++++|++++..
T Consensus 431 ~l~~n~l~----------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-- 492 (606)
T 3t6q_A 431 NLSHSLLD----------------ISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSID-- 492 (606)
T ss_dssp ECTTCCCB----------------TTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEEC--
T ss_pred ECCCCccC----------------CcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccC--
Confidence 99999884 46688899999999999999999873 3467899999999999999999755
Q ss_pred ccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCcccc
Q 047790 512 SLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLC 591 (885)
Q Consensus 512 ~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~ 591 (885)
|..|+.+++|+.|+|++ |++++.+|..+.++++| +|+|++|++++.+|..+.
T Consensus 493 --------------~~~~~~l~~L~~L~Ls~-------------N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~ 544 (606)
T 3t6q_A 493 --------------QHAFTSLKMMNHVDLSH-------------NRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLP 544 (606)
T ss_dssp --------------TTTTTTCTTCCEEECCS-------------SCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHH
T ss_pred --------------hhhhccccCCCEEECCC-------------CccCcCChhHhCccccc-EEECcCCcccccCHhhcc
Confidence 78899999999999995 45556788999999999 999999999988888899
Q ss_pred CccccceeecccCcCCCCCCC
Q 047790 592 SLPYLLYLNLADNRLEGEVPR 612 (885)
Q Consensus 592 ~l~~L~~L~l~~N~l~~~~p~ 612 (885)
.+++|++|++++|++.+..+.
T Consensus 545 ~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 545 ILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp HHHTSSEEECTTCCEECSGGG
T ss_pred cCCCCCEEeCCCCCccccCCc
Confidence 999999999999999987664
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-57 Score=535.02 Aligned_cols=492 Identities=22% Similarity=0.186 Sum_probs=346.3
Q ss_pred CCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEc
Q 047790 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDF 167 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 167 (885)
++|++|||++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|.+|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 45555555555555555555555555555555555555544555555555555555555555544555555555555555
Q ss_pred cCCcCCccCCcccCCCCCCccccccccccCC-CCCcccccccccccEEEeecccCcccCCccccCCCccc----ceeccc
Q 047790 168 SGNGLNGTIPSRLGDLTQLQDLDLSDNLLSG-SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLS----DLYLGI 242 (885)
Q Consensus 168 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~l~~ 242 (885)
++|++++..|..|+++++|++|++++|++++ .+|.. ++++++|++|++++|++++..|..++.+++|+ +++++.
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAY-FSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGG-GGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHh-HhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 5555554444555555555555555555542 33433 55555555555555555555555555544443 355543
Q ss_pred ccccccccccccCccccCCCCCcEEEecCCccc-ccccccccCCCCCcE-------------------------------
Q 047790 243 GPYQLSLFVGRITPEIGNCSMLKYISLSNNKLS-GPIPRELCNSGSLVE------------------------------- 290 (885)
Q Consensus 243 n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~------------------------------- 290 (885)
|.. ..+++......+|++|++++|.++ +..|..+..+++++.
T Consensus 191 n~l------~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~ 264 (606)
T 3vq2_A 191 NPI------DFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTID 264 (606)
T ss_dssp CCC------CEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEE
T ss_pred CCc------ceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHh
Confidence 331 123333333335555555555554 233444444444444
Q ss_pred -EEc-cCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccc
Q 047790 291 -INL-DGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASN 367 (885)
Q Consensus 291 -L~L-~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 367 (885)
+++ ..|.+++..+. +..+++|+.|++++|.+.. +| .+... .|+.|++++|++ +.+| .+ .+++|++|++++|
T Consensus 265 ~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n 338 (606)
T 3vq2_A 265 EFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMN 338 (606)
T ss_dssp EEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESC
T ss_pred heeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCC
Confidence 444 67777777776 8888999999999998864 45 45554 789999999999 5666 44 8889999999998
Q ss_pred cccCCCcccccccccccEEEccCCccccc--CcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcce
Q 047790 368 LLEGSLSWEISNAVALEKLDLSSNMLTRQ--IPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCV 445 (885)
Q Consensus 368 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 445 (885)
...+.. .+..+++|++|++++|++++. .|..+..+++|++|++++|.+++ +|..+..+++|++|++++|++.
T Consensus 339 ~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~--- 412 (606)
T 3vq2_A 339 KGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLK--- 412 (606)
T ss_dssp SSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEE---
T ss_pred cCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccC---
Confidence 655433 567888999999999998876 37888889999999999999885 5688888999999999888875
Q ss_pred eEEEEeecCCcccCCCc-hhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCC
Q 047790 446 VVVYLLLNNNMLSGKIP-GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGS 524 (885)
Q Consensus 446 ~~~~l~l~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~ 524 (885)
+..| ..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++.+
T Consensus 413 -------------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------------- 464 (606)
T 3vq2_A 413 -------------RVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNT--------------- 464 (606)
T ss_dssp -------------STTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGE---------------
T ss_pred -------------CccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcc---------------
Confidence 3445 67889999999999999999999999999999999999999998632
Q ss_pred CCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccC
Q 047790 525 VPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADN 604 (885)
Q Consensus 525 ~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N 604 (885)
+|..|+.+++|+.|+|++|+ +++.+|..++++++|++|+|++|++++.+|..+..+++|++|++++|
T Consensus 465 ~~~~~~~l~~L~~L~Ls~n~-------------l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 531 (606)
T 3vq2_A 465 LSNVFANTTNLTFLDLSKCQ-------------LEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531 (606)
T ss_dssp ECSCCTTCTTCCEEECTTSC-------------CCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTS
T ss_pred hHHhhccCCCCCEEECCCCc-------------CCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCC
Confidence 27889999999999999554 45567888999999999999999999988999999999999999999
Q ss_pred cCCCCCCCCcccc-ccccccccCCccccccccCCcccccccc
Q 047790 605 RLEGEVPRSGICQ-NLSIISLTGNKDLCEKIMGSDCQILTFG 645 (885)
Q Consensus 605 ~l~~~~p~~~~~~-~~~~~~~~~N~~~c~~~~~~~c~~~~~~ 645 (885)
+++..++....+. +++.+++++||+.| +|...|+.
T Consensus 532 ~l~~~p~~~~~l~~~L~~l~l~~N~~~c------~c~~~~~~ 567 (606)
T 3vq2_A 532 RIETSKGILQHFPKSLAFFNLTNNSVAC------ICEHQKFL 567 (606)
T ss_dssp CCCCEESCGGGSCTTCCEEECCSCCCCC------SSTTHHHH
T ss_pred cCcccCHhHhhhcccCcEEEccCCCccc------CCccHHHH
Confidence 9997655555554 58999999999999 88876543
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-57 Score=544.80 Aligned_cols=480 Identities=18% Similarity=0.239 Sum_probs=368.9
Q ss_pred cCCCCHHHHHHHHHHHHhCCCCCCCCCCCCCC-----CC--ccc------------CCccccC-CcEEEEEEeccccccc
Q 047790 20 AIDEPKQERRSLVHFKNSLQNPQVLSGWNKTT-----RH--CHW------------FGVKCRH-SRVVSLVIQTQSLKGP 79 (885)
Q Consensus 20 ~~~~~~~~~~aLl~~k~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~-~~v~~l~l~~~~l~g~ 79 (885)
.+.+..+|++||++||+++.++ +|+.+. +| |.| .||+|+. .||++|+|+++++.|.
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEE
T ss_pred ccccchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCc
Confidence 3456678999999999999776 786443 55 999 9999985 6999999999999999
Q ss_pred ccccccCCCCCCEEec-CCCcccCcCCcCc--------------------------------------------------
Q 047790 80 VSPFLFNLSSLRILDL-SKNLLFGQLSPQV-------------------------------------------------- 108 (885)
Q Consensus 80 ~~~~l~~l~~L~~L~L-s~n~l~~~~~~~~-------------------------------------------------- 108 (885)
+|+++++|++|++||| ++|.++|..|...
T Consensus 339 ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp ECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred CchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 9999999999999999 8998877643221
Q ss_pred -cCcCCCCEEeccC--CcCCCCCCccccccccccEeeeeccCCCC-----------------CCCcccc--CCccCceEE
Q 047790 109 -SNLKRLKMLSVGE--NQLSGSIPSQLGLLTRLETISLRSNSFTG-----------------EMPSELG--DIKQLKSLD 166 (885)
Q Consensus 109 -~~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~l~--~l~~L~~L~ 166 (885)
.....++.+.++. |++++ +|..|+++++|++|+|++|++++ .+|..++ ++++|++|+
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~ 497 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE 497 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred cccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEE
Confidence 1122344444444 78887 89899999999999999999997 3888877 899999999
Q ss_pred ccCCcCCccCCcccCCCCCCccccccccc-cCC-CCCcccccccc-------cccEEEeecccCcccCCc--cccCCCcc
Q 047790 167 FSGNGLNGTIPSRLGDLTQLQDLDLSDNL-LSG-SLPVSLLKNLQ-------SLSYLDVSNNLLSGNIPP--EIGNLKKL 235 (885)
Q Consensus 167 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L 235 (885)
|++|++.+.+|..|+++++|++|+|++|+ ++| .+|.. +..++ +|++|++++|+++ .+|. .++++++|
T Consensus 498 Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~-i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L 575 (876)
T 4ecn_A 498 LYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKAD-WTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKL 575 (876)
T ss_dssp EESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHH-HHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTC
T ss_pred CcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHH-HHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCC
Confidence 99999888999889999999999999998 887 67765 44444 8999999999998 7888 88888888
Q ss_pred cceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCC-CcEEEccCCCCcCcccccccccCC--c
Q 047790 236 SDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGS-LVEINLDGNMLSGTIEDVFDRCTN--L 312 (885)
Q Consensus 236 ~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~--L 312 (885)
+.|+++.|... .+| .++.+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|.++ .+|..+..++. |
T Consensus 576 ~~L~Ls~N~l~------~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L 646 (876)
T 4ecn_A 576 GLLDCVHNKVR------HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVM 646 (876)
T ss_dssp CEEECTTSCCC------BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCE
T ss_pred CEEECCCCCcc------cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCC
Confidence 88888666522 566 7888888888888888888 78888888888 888888888888 45566666544 8
Q ss_pred ceeeccccccCCCCCccc------CCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccc-------
Q 047790 313 SELVLVNNRISGSIPEYI------SELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISN------- 379 (885)
Q Consensus 313 ~~L~Ls~N~l~~~~p~~~------~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~------- 379 (885)
+.|+|++|++.+.+|... ...+|+.|++++|+++...+..+..+++|+.|++++|++....+..+..
T Consensus 647 ~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~n 726 (876)
T 4ecn_A 647 GSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKN 726 (876)
T ss_dssp EEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTT
T ss_pred CEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccc
Confidence 888888888887766543 2225888888888888443334447788888888888887444333332
Q ss_pred cccccEEEccCCcccccCccccc--ccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcc
Q 047790 380 AVALEKLDLSSNMLTRQIPKKIG--NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNML 457 (885)
Q Consensus 380 l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l 457 (885)
+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+ ++++|.+
T Consensus 727 l~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~----------~ls~N~l 794 (876)
T 4ecn_A 727 TYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR----------DAEGNRI 794 (876)
T ss_dssp GGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB----------CTTCCBC
T ss_pred cCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC----------Ccccccc
Confidence 237888888888887 5677776 78888888888888886 67777888888888888876 3566777
Q ss_pred cCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcE
Q 047790 458 SGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTH 537 (885)
Q Consensus 458 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~ 537 (885)
.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.|+|++|++...- +..|.....+..
T Consensus 795 ~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~----------------~~~~~~~~~~~~ 855 (876)
T 4ecn_A 795 LRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISID----------------VTSVCPYIEAGM 855 (876)
T ss_dssp CCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEE----------------CGGGHHHHHTTC
T ss_pred cccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccC----------------hHHccccccchh
Confidence 777888888888888888888888 57777765 47788888888776332 344555555566
Q ss_pred EEccCCCCC
Q 047790 538 LDLSCNELD 546 (885)
Q Consensus 538 L~Ls~N~l~ 546 (885)
+.|++|++.
T Consensus 856 ~~L~~n~~~ 864 (876)
T 4ecn_A 856 YVLLYDKTQ 864 (876)
T ss_dssp CEEECCTTS
T ss_pred eeecCCCcc
Confidence 666655544
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-55 Score=526.12 Aligned_cols=546 Identities=23% Similarity=0.201 Sum_probs=446.8
Q ss_pred EEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCC
Q 047790 69 LVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSF 148 (885)
Q Consensus 69 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 148 (885)
++.++++++ .+|..+. +++++|||++|.+++..+..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|.+
T Consensus 9 ~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 85 (680)
T 1ziw_A 9 ADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 85 (680)
T ss_dssp EECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCC
T ss_pred eECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCcc
Confidence 344445554 4666554 7899999999999988888899999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCcc
Q 047790 149 TGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE 228 (885)
Q Consensus 149 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 228 (885)
++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..| ..+.++++|++|++++|++++..+..
T Consensus 86 ~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~ 164 (680)
T 1ziw_A 86 SQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKL-GTQVQLENLQELLLSNNKIQALKSEE 164 (680)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCC-CSSSCCTTCCEEECCSSCCCCBCHHH
T ss_pred CccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCc-hhhcccccCCEEEccCCcccccCHHH
Confidence 96666689999999999999999998888899999999999999999995444 45889999999999999999877776
Q ss_pred cc--CCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccccccccc---CCCCCcEEEccCCCCcCccc
Q 047790 229 IG--NLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC---NSGSLVEINLDGNMLSGTIE 303 (885)
Q Consensus 229 ~~--~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~---~l~~L~~L~L~~N~l~~~~~ 303 (885)
+. .+++|+.|+++.|.. .+..|..+..+++|+.|++++|.+.+.....++ ..++|+.|++++|.+++..+
T Consensus 165 ~~~~~~~~L~~L~L~~n~l-----~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~ 239 (680)
T 1ziw_A 165 LDIFANSSLKKLELSSNQI-----KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSN 239 (680)
T ss_dssp HGGGTTCEESEEECTTCCC-----CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECT
T ss_pred hhccccccccEEECCCCcc-----cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccCh
Confidence 54 568999999976643 344566788899999999999988754333322 35789999999999999999
Q ss_pred ccccccCC--cceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccC-----CCc-
Q 047790 304 DVFDRCTN--LSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEG-----SLS- 374 (885)
Q Consensus 304 ~~~~~l~~--L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-----~~~- 374 (885)
..|..++. |++|++++|++++..|..+..+ .|++|++++|++++..|..|..+++|+.|++++|...+ .+|
T Consensus 240 ~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~ 319 (680)
T 1ziw_A 240 TTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPK 319 (680)
T ss_dssp TTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCE
T ss_pred hHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccc
Confidence 99988755 9999999999998888888877 79999999999999999999999999999999876553 222
Q ss_pred ---ccccccccccEEEccCCcccccCcccccccccccceecccccccCc--CCCccCCC--CcccEEEcCCcccCccee-
Q 047790 375 ---WEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI--IPMEFGDC--ISLNTLDLGSNNLNGCVV- 446 (885)
Q Consensus 375 ---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l--~~L~~L~Ls~N~l~~~~~- 446 (885)
..|..+++|++|++++|++++..|..|..+++|++|++++|.++.. .+..|..+ ++|+.|++++|++++..+
T Consensus 320 i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~ 399 (680)
T 1ziw_A 320 IDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESD 399 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTT
T ss_pred cChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChh
Confidence 3688899999999999999998889999999999999999986432 33344443 589999999999876543
Q ss_pred -------EEEEeecCCcccCCCc-hhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccce--eccccccc--
Q 047790 447 -------VVYLLLNNNMLSGKIP-GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLT--GSIPESLG-- 514 (885)
Q Consensus 447 -------~~~l~l~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~-- 514 (885)
++.|++++|.+++.+| ..+.++++|++|++++|++++..+..|..+++|+.|++++|+++ +.+|..+.
T Consensus 400 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l 479 (680)
T 1ziw_A 400 AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPL 479 (680)
T ss_dssp TTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTC
T ss_pred hhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccC
Confidence 4678888888887666 67888888999999999888888888888888999999988887 45565444
Q ss_pred ------cccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCc
Q 047790 515 ------YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPE 588 (885)
Q Consensus 515 ------~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~ 588 (885)
++++|++++..|..|..+++|+.|+|++|+++.+. ...+.+..+..++++++|++|+|++|+++ .+|.
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~-----~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~ 553 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLW-----KHANPGGPIYFLKGLSHLHILNLESNGFD-EIPV 553 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGG-----STTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCT
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccc-----hhhccCCcchhhcCCCCCCEEECCCCCCC-CCCH
Confidence 35677777766677777777777877777766442 11111222345889999999999999999 5665
Q ss_pred -cccCccccceeecccCcCCCCCCCC-ccccccccccccCCcc
Q 047790 589 -KLCSLPYLLYLNLADNRLEGEVPRS-GICQNLSIISLTGNKD 629 (885)
Q Consensus 589 -~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~ 629 (885)
.+..+++|++|++++|+|++.++.. ..+.+++.+++++|..
T Consensus 554 ~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l 596 (680)
T 1ziw_A 554 EVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLI 596 (680)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred HHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcC
Confidence 5899999999999999999876654 5678899999999964
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-55 Score=518.76 Aligned_cols=489 Identities=22% Similarity=0.216 Sum_probs=429.0
Q ss_pred cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee
Q 047790 65 RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 144 (885)
+++.++++++.+++..+..+.++++|++|||++|.+++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAV 112 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECT
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEcc
Confidence 78999999999998877899999999999999999999889999999999999999999998889999999999999999
Q ss_pred ccCCCCCCCccccCCccCceEEccCCcCCc-cCCcccCCCCCCccccccccccCCCCCccccccccccc----EEEeecc
Q 047790 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLS----YLDVSNN 219 (885)
Q Consensus 145 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~----~L~Ls~N 219 (885)
+|.+++..|..++++++|++|++++|++++ .+|..|+++++|++|++++|+++ .++...++.+++|+ +|++++|
T Consensus 113 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 113 ETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ-TITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCC-EECTTTTHHHHHCTTCCCEEECTTC
T ss_pred CCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcce-ecChhhhhhhhccccccceeeccCC
Confidence 999998887899999999999999999986 57999999999999999999998 45555577777765 8999999
Q ss_pred cCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEe------------------------------
Q 047790 220 LLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISL------------------------------ 269 (885)
Q Consensus 220 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~L------------------------------ 269 (885)
++++..+..+... +|+.|+++.|... .+.+|..+.+++.|+.+++
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~----~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l 266 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNS----SNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEF 266 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSC----HHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEE
T ss_pred CcceeCcccccCc-eeeeeeccCCccc----hhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhhe
Confidence 9996665555544 8999999766432 1334455566666665555
Q ss_pred ---cCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccc
Q 047790 270 ---SNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFT 346 (885)
Q Consensus 270 ---s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~ 346 (885)
..|.+++.+|. +..+++|+.|++++|.++..+ .+..+++|++|++++|++ +.+|.. ....|+.|++++|+..
T Consensus 267 ~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~--~l~~~~~L~~L~l~~n~l-~~lp~~-~l~~L~~L~l~~n~~~ 341 (606)
T 3vq2_A 267 RLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE--DVPKHFKWQSLSIIRCQL-KQFPTL-DLPFLKSLTLTMNKGS 341 (606)
T ss_dssp EECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC--CCCTTCCCSEEEEESCCC-SSCCCC-CCSSCCEEEEESCSSC
T ss_pred eccccccccccccc-cccCCCCCEEEecCccchhhh--hccccccCCEEEcccccC-cccccC-CCCccceeeccCCcCc
Confidence 67788888887 899999999999999998765 788999999999999999 677855 3348999999999766
Q ss_pred cccCccccCccccceeecccccccCC--CcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCC-C
Q 047790 347 GVIPVSLWNSENLMEFNAASNLLEGS--LSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIP-M 423 (885)
Q Consensus 347 ~~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~ 423 (885)
+.. .+..+++|++|++++|.+++. .+..+..+++|++|++++|++++ +|..+..+++|+.|++++|++++..| .
T Consensus 342 ~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 418 (606)
T 3vq2_A 342 ISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFS 418 (606)
T ss_dssp EEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTT
T ss_pred cch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChh
Confidence 544 677899999999999999977 48889999999999999999986 66899999999999999999998888 7
Q ss_pred ccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccC-CCCCCcccccccceeeecc
Q 047790 424 EFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTG-SIPPEFGDSLKVQGLYLGH 502 (885)
Q Consensus 424 ~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~ 502 (885)
.+..+++|++|++++|+++ +..|..+..+++|++|++++|++++ .+|..|..+++|+.|++++
T Consensus 419 ~~~~l~~L~~L~l~~n~l~----------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 482 (606)
T 3vq2_A 419 AFLSLEKLLYLDISYTNTK----------------IDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSK 482 (606)
T ss_dssp TTTTCTTCCEEECTTSCCE----------------ECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred hhhccccCCEEECcCCCCC----------------ccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCC
Confidence 8999999999999999884 4678889999999999999999998 4799999999999999999
Q ss_pred ccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccC
Q 047790 503 NQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNML 582 (885)
Q Consensus 503 N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l 582 (885)
|++++.+ |..|+.+++|+.|+|++|++ ++.+|..++++++|++|||++|++
T Consensus 483 n~l~~~~----------------~~~~~~l~~L~~L~Ls~N~l-------------~~~~~~~~~~l~~L~~L~l~~N~l 533 (606)
T 3vq2_A 483 CQLEQIS----------------WGVFDTLHRLQLLNMSHNNL-------------LFLDSSHYNQLYSLSTLDCSFNRI 533 (606)
T ss_dssp SCCCEEC----------------TTTTTTCTTCCEEECCSSCC-------------SCEEGGGTTTCTTCCEEECTTSCC
T ss_pred CcCCccC----------------hhhhcccccCCEEECCCCcC-------------CCcCHHHccCCCcCCEEECCCCcC
Confidence 9999755 77899999999999995554 556789999999999999999999
Q ss_pred CCCCCccccCcc-ccceeecccCcCCCCCCCC
Q 047790 583 DGHIPEKLCSLP-YLLYLNLADNRLEGEVPRS 613 (885)
Q Consensus 583 ~~~ip~~l~~l~-~L~~L~l~~N~l~~~~p~~ 613 (885)
+ .+|..+..++ +|++|++++|++.+..+..
T Consensus 534 ~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 534 E-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp C-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred c-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 9 7898899997 5999999999999877654
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-53 Score=519.80 Aligned_cols=511 Identities=23% Similarity=0.265 Sum_probs=399.9
Q ss_pred cccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcC-CcCccCcCCCCEEeccCCcCCCCCCccc
Q 047790 54 CHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQL-SPQVSNLKRLKMLSVGENQLSGSIPSQL 132 (885)
Q Consensus 54 c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~p~~~ 132 (885)
|.|..|.+-..+++.|+++++.+++..+..+.++++|++|||++|...+.+ |..|+++++|++|+|++|.+++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 568888884458999999999999888899999999999999999776666 7789999999999999999999899999
Q ss_pred cccccccEeeeeccCCCCCCCcc--ccCCccCceEEccCCcCCccCC-cccCCCCCCccccccccccCCCCCccccccc-
Q 047790 133 GLLTRLETISLRSNSFTGEMPSE--LGDIKQLKSLDFSGNGLNGTIP-SRLGDLTQLQDLDLSDNLLSGSLPVSLLKNL- 208 (885)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~p~~--l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l- 208 (885)
+.+++|++|+|++|.+++.+|.. |+++++|++|+|++|++++..+ ..|+++++|++|+|++|.+++..|.. +..+
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~-l~~l~ 172 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHE-LEPLQ 172 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGG-GHHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHH-ccccc
Confidence 99999999999999999877665 9999999999999999997655 57999999999999999999665554 7777
Q ss_pred -ccccEEEeecccCcccCCccccCCCc------ccceecccccccccccccccCccccC---CCCCcEEEec--------
Q 047790 209 -QSLSYLDVSNNLLSGNIPPEIGNLKK------LSDLYLGIGPYQLSLFVGRITPEIGN---CSMLKYISLS-------- 270 (885)
Q Consensus 209 -~~L~~L~Ls~N~l~~~~p~~~~~l~~------L~~L~l~~n~~~~~~~~~~~~~~l~~---l~~L~~L~Ls-------- 270 (885)
++|+.|++++|.+++..|..++.+.+ |+.|+++.|... +.++..+.. .+.++.|.++
T Consensus 173 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~-----~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~ 247 (844)
T 3j0a_A 173 GKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWT-----VDITGNFSNAISKSQAFSLILAHHIMGAGF 247 (844)
T ss_dssp HCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSS-----TTTTSGGGGTSCSCCBSEEECCSSCCBCSS
T ss_pred CCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCc-----hhHHHHHHhhcCcccccceecccccccccc
Confidence 89999999999999999988887766 999999776432 333333332 2456666665
Q ss_pred -CCcccccccccccCC--CCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccc
Q 047790 271 -NNKLSGPIPRELCNS--GSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFT 346 (885)
Q Consensus 271 -~N~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~ 346 (885)
.+++.+..+..+..+ ++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..+..+ .|++|++++|+++
T Consensus 248 ~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 327 (844)
T 3j0a_A 248 GFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLG 327 (844)
T ss_dssp SCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCS
T ss_pred cccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCC
Confidence 233333334444443 567777777777777777777777777777777777777777666666 5777777777777
Q ss_pred cccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccC
Q 047790 347 GVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426 (885)
Q Consensus 347 ~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 426 (885)
+..|..|..+++|+.|++++|.+.+..+..|..+++|++|+|++|.+++. ..+++|+.|++++|+++. +|..
T Consensus 328 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~~-l~~~-- 399 (844)
T 3j0a_A 328 ELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLVT-LPKI-- 399 (844)
T ss_dssp CCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCCC-CCCC--
T ss_pred ccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCccc-cccc--
Confidence 77777777777777777777777777777777777777777777777642 226677777777777773 4433
Q ss_pred CCCcccEEEcCCcccCcc---------eeEEEEeecCCcccCCCch-hcccCCCCCEEeccCcccc-----CCCCCCccc
Q 047790 427 DCISLNTLDLGSNNLNGC---------VVVVYLLLNNNMLSGKIPG-SLSRLTNLTTLNLFGNLLT-----GSIPPEFGD 491 (885)
Q Consensus 427 ~l~~L~~L~Ls~N~l~~~---------~~~~~l~l~~n~l~~~~p~-~l~~l~~L~~L~Ls~N~l~-----~~~p~~~~~ 491 (885)
..+++.|++++|++++. ..++.|++++|.+++..+. .+..+++|+.|+|++|.++ +..|..|.+
T Consensus 400 -~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 478 (844)
T 3j0a_A 400 -NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEG 478 (844)
T ss_dssp -CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSC
T ss_pred -ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcC
Confidence 34567777777776643 2345677777777765443 4566899999999999997 445577899
Q ss_pred ccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccc
Q 047790 492 SLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQ 571 (885)
Q Consensus 492 l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~ 571 (885)
+++|+.|+|++|++++.+ |..|..+++|+.|+|++|+++++ .|..+. ++
T Consensus 479 l~~L~~L~Ls~N~l~~~~----------------~~~~~~l~~L~~L~Ls~N~l~~l-------------~~~~~~--~~ 527 (844)
T 3j0a_A 479 LSHLQVLYLNHNYLNSLP----------------PGVFSHLTALRGLSLNSNRLTVL-------------SHNDLP--AN 527 (844)
T ss_dssp BCCEECCCCCHHHHTTCC----------------TTSSSSCCSCSEEEEESCCCSSC-------------CCCCCC--SC
T ss_pred cccccEEECCCCcccccC----------------hhHccchhhhheeECCCCCCCcc-------------Chhhhh--cc
Confidence 999999999999999644 77899999999999997776633 233333 89
Q ss_pred ccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC
Q 047790 572 LEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS 613 (885)
Q Consensus 572 L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~ 613 (885)
|++|||++|+|++.+|..+ ++|+.|++++|++.+..+..
T Consensus 528 L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 528 LEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELS 566 (844)
T ss_dssp CCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSCC
T ss_pred ccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccccH
Confidence 9999999999999888775 47899999999999876643
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-53 Score=494.59 Aligned_cols=488 Identities=22% Similarity=0.246 Sum_probs=353.7
Q ss_pred CcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccc
Q 047790 53 HCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQL 132 (885)
Q Consensus 53 ~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~ 132 (885)
.|.|.|+ |+.. +++++ .+|+.+. ++|++|||++|.+++..|..|+++++|++|+|++|++++..|+.|
T Consensus 3 ~C~~~~~-c~~~--------~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~ 70 (549)
T 2z81_A 3 SCDASGV-CDGR--------SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAF 70 (549)
T ss_dssp EECTTSE-EECT--------TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTT
T ss_pred cCCCCce-EECC--------CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhc
Confidence 5999998 8643 34444 5777654 799999999999999889999999999999999999998888999
Q ss_pred cccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCc-cCCcccCCCCCCccccccccccCCCCCcccccccccc
Q 047790 133 GLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSL 211 (885)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L 211 (885)
+.+++|++|+|++|++++..|..|+++++|++|+|++|++++ ..|..|+++++|++|++++|++.+.+|...+.++++|
T Consensus 71 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L 150 (549)
T 2z81_A 71 YSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSL 150 (549)
T ss_dssp TTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEE
T ss_pred cccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccccc
Confidence 999999999999999998887889999999999999999986 3577899999999999999996668887779999999
Q ss_pred cEEEeecccCcccCCccccCCCcccceecccccccccccccccCcc-ccCCCCCcEEEecCCcccccc--c-ccccCCCC
Q 047790 212 SYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPE-IGNCSMLKYISLSNNKLSGPI--P-RELCNSGS 287 (885)
Q Consensus 212 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~--p-~~l~~l~~ 287 (885)
++|++++|++++..|..+..+++|++|+++.|.. +.+|.. +..+++|++|++++|++++.. | .....+++
T Consensus 151 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~ 224 (549)
T 2z81_A 151 NELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES------AFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSP 224 (549)
T ss_dssp EEEEEEETTCCEECTTTTTTCSEEEEEEEECSBS------TTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCC
T ss_pred CeeeccCCcccccChhhhhccccCceEecccCcc------cccchhhHhhcccccEEEccCCccccccccccchhhhhhc
Confidence 9999999999999999999999999999976652 334444 356889999999999998742 2 22345678
Q ss_pred CcEEEccCCCCcCcccc----cccccCCcceeeccccccCCCCCc------ccCCC-CceeEEeecCccccccCccccCc
Q 047790 288 LVEINLDGNMLSGTIED----VFDRCTNLSELVLVNNRISGSIPE------YISEL-PLKVFDLQYNNFTGVIPVSLWNS 356 (885)
Q Consensus 288 L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~~p~------~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l 356 (885)
|+.|++++|.+++..+. .+..+++|+.|++++|.+.+...- .+... .++.|+++++.+..... +
T Consensus 225 L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~--~--- 299 (549)
T 2z81_A 225 MKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL--F--- 299 (549)
T ss_dssp CCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG--S---
T ss_pred ccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhh--c---
Confidence 99999999988765443 345677888888888887653211 11122 35555555554332100 0
Q ss_pred cccceeecccccccCCCcccccccccccEEEccCCcccccCcccc-cccccccceecccccccCcCC---CccCCCCccc
Q 047790 357 ENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI-GNLTNIQILKLNSNFFDGIIP---MEFGDCISLN 432 (885)
Q Consensus 357 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~ 432 (885)
...+..+....+|+.|++++|+++ .+|..+ ..+++|++|+|++|++++.+| ..+..+++|+
T Consensus 300 --------------~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~ 364 (549)
T 2z81_A 300 --------------YDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQ 364 (549)
T ss_dssp --------------CCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCC
T ss_pred --------------ccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCc
Confidence 011112333456777777777776 344444 467777777777777776553 3466777777
Q ss_pred EEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccc
Q 047790 433 TLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPES 512 (885)
Q Consensus 433 ~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 512 (885)
+|++++|++++.. ..+..+..+++|++|++++|+++ .+|..+..+++|+.|++++|++++ +
T Consensus 365 ~L~Ls~N~l~~~~--------------~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l--- 425 (549)
T 2z81_A 365 TLVLSQNHLRSMQ--------------KTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-V--- 425 (549)
T ss_dssp EEECTTSCCCCHH--------------HHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-C---
T ss_pred EEEccCCcccccc--------------cchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-c---
Confidence 7777777775211 01134667777777777777777 567777777777777777777762 1
Q ss_pred cccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccC
Q 047790 513 LGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCS 592 (885)
Q Consensus 513 ~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~ 592 (885)
|..+ .++|+.|+|++|+++++ + +.+++|++|+|++|+++ .+|. ...
T Consensus 426 -------------~~~~--~~~L~~L~Ls~N~l~~~--------------~---~~l~~L~~L~Ls~N~l~-~ip~-~~~ 471 (549)
T 2z81_A 426 -------------KTCI--PQTLEVLDVSNNNLDSF--------------S---LFLPRLQELYISRNKLK-TLPD-ASL 471 (549)
T ss_dssp -------------CTTS--CTTCSEEECCSSCCSCC--------------C---CCCTTCCEEECCSSCCS-SCCC-GGG
T ss_pred -------------cchh--cCCceEEECCCCChhhh--------------c---ccCChhcEEECCCCccC-cCCC-ccc
Confidence 2222 14677777775555421 1 35667777777777776 5665 356
Q ss_pred ccccceeecccCcCCCCCCC-CccccccccccccCCcccc
Q 047790 593 LPYLLYLNLADNRLEGEVPR-SGICQNLSIISLTGNKDLC 631 (885)
Q Consensus 593 l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~N~~~c 631 (885)
+++|++|++++|++++.+|. ...+.+++.+++++||+.|
T Consensus 472 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 511 (549)
T 2z81_A 472 FPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 511 (549)
T ss_dssp CTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCC
T ss_pred CccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccC
Confidence 77777777777777776665 3566667777777777777
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-51 Score=480.42 Aligned_cols=494 Identities=22% Similarity=0.221 Sum_probs=369.7
Q ss_pred cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee
Q 047790 65 RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 144 (885)
+++.|+++++.+++..+..+.++++|++|||++|.+++..|..|+++++|++|+|++|++++..|..|+.+++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 56677777777776666667777777777777777776666677777777777777777776666777777777777777
Q ss_pred ccCCCCCCCccccCCccCceEEccCCcCCc-cCCcccCCCCCCccccccccccCCCCCcccccccccc----cEEEeecc
Q 047790 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSL----SYLDVSNN 219 (885)
Q Consensus 145 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L----~~L~Ls~N 219 (885)
+|++++..+..++++++|++|++++|++++ .+|..|+++++|++|++++|+++ .++...++.+++| ++|++++|
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC-EECGGGGHHHHTCTTCCCEEECTTC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccc-eecHHHccchhccchhhhhcccCCC
Confidence 777775555567777777777777777775 35777777777777777777776 4444446667776 67777777
Q ss_pred cCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccc------ccccccccCCC--CCcEE
Q 047790 220 LLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLS------GPIPRELCNSG--SLVEI 291 (885)
Q Consensus 220 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~------~~~p~~l~~l~--~L~~L 291 (885)
.+++..|..+..+ +|+.|+++.|... ...++..+..++.++.+.+.-..+. ......+..+. .++.+
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~----~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l 262 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDS----LNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEF 262 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSC----TTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEE
T ss_pred CceecCHHHhccC-cceeEeccccccc----ccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhh
Confidence 7776666666555 6777777544221 2234455566666666555432221 11122222222 35667
Q ss_pred EccCC-CCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeeccccccc
Q 047790 292 NLDGN-MLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLE 370 (885)
Q Consensus 292 ~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 370 (885)
+++++ .+.+..++.+..+++|++|++++|.++ .+|..+....|+.|++++|.++ .+|. ..+++|+.|++++|.+.
T Consensus 263 ~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~ 338 (570)
T 2z63_A 263 RLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGG 338 (570)
T ss_dssp EEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSC
T ss_pred hhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCccc-ccCc--ccccccCEEeCcCCccc
Confidence 77777 777788888888999999999999988 4666666558999999999988 4444 46788999999999887
Q ss_pred CCCcccccccccccEEEccCCcccccC--cccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEE
Q 047790 371 GSLSWEISNAVALEKLDLSSNMLTRQI--PKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVV 448 (885)
Q Consensus 371 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 448 (885)
+..+. ..+++|++|++++|++++.. |..+..+++|++|++++|.+++..+. +..+++|++|++++|++.
T Consensus 339 ~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~------ 409 (570)
T 2z63_A 339 NAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLK------ 409 (570)
T ss_dssp CBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEE------
T ss_pred ccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccc------
Confidence 76665 67888999999999988654 67788889999999999999865554 888999999999988875
Q ss_pred EEeecCCcccCCCc-hhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccce-eccccccccccCCccCCCCC
Q 047790 449 YLLLNNNMLSGKIP-GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLT-GSIPESLGYLSGNKLYGSVP 526 (885)
Q Consensus 449 ~l~l~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~ls~n~l~~~~p 526 (885)
+..| ..+..+++|++|++++|++++..|..|..+++|+.|++++|+++ +.+ |
T Consensus 410 ----------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----------------p 463 (570)
T 2z63_A 410 ----------QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL----------------P 463 (570)
T ss_dssp ----------SCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEE----------------C
T ss_pred ----------cccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccc----------------h
Confidence 2333 46788999999999999999888889999999999999999987 344 7
Q ss_pred ccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcC
Q 047790 527 TSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRL 606 (885)
Q Consensus 527 ~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l 606 (885)
..|..+++|+.|+|++|+ +++..|..++++++|++|++++|++++.+|..+..+++|++|++++|++
T Consensus 464 ~~~~~l~~L~~L~l~~n~-------------l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 530 (570)
T 2z63_A 464 DIFTELRNLTFLDLSQCQ-------------LEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPW 530 (570)
T ss_dssp SCCTTCTTCCEEECTTSC-------------CCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred hhhhcccCCCEEECCCCc-------------cccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcc
Confidence 788889999999999554 4455688899999999999999999987777888999999999999999
Q ss_pred CCCCCCCccc
Q 047790 607 EGEVPRSGIC 616 (885)
Q Consensus 607 ~~~~p~~~~~ 616 (885)
++.+|.....
T Consensus 531 ~~~~~~~~~~ 540 (570)
T 2z63_A 531 DCSCPRIDYL 540 (570)
T ss_dssp CCCTTTTHHH
T ss_pred cCCCcchHHH
Confidence 9988875443
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-51 Score=487.67 Aligned_cols=503 Identities=18% Similarity=0.234 Sum_probs=296.4
Q ss_pred CHHHHHHHHHHHHhCCCCCCCCCCCCCCC----CcccCCc--cccC---CcEEEEEEecccccccccccccCCCCCCEEe
Q 047790 24 PKQERRSLVHFKNSLQNPQVLSGWNKTTR----HCHWFGV--KCRH---SRVVSLVIQTQSLKGPVSPFLFNLSSLRILD 94 (885)
Q Consensus 24 ~~~~~~aLl~~k~~~~~~~~~~~w~~~~~----~c~w~gv--~c~~---~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~ 94 (885)
.+++.+.-.++++-.. .-.-..|....+ .|.|..- .|.. ..|++ + . -.+++.|+
T Consensus 25 ~~~~~~d~~aL~~~~~-~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C-~--~-------------~~~V~~L~ 87 (636)
T 4eco_A 25 TAEYIKDYLALKEIWD-ALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL-N--S-------------NGRVTGLS 87 (636)
T ss_dssp CCHHHHHHHHHHHHHH-HTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEE-C--T-------------TCCEEEEE
T ss_pred hhhHHHHHHHHHHHHH-HcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEE-c--C-------------CCCEEEEE
Confidence 3444444555554332 223457864332 3579632 2444 35654 0 0 03678999
Q ss_pred cCCCcccCcCCcCccCcCCCCEEeccCCcC------CC------CCCccccccccccEeeeeccCCCCCCCccccC-Ccc
Q 047790 95 LSKNLLFGQLSPQVSNLKRLKMLSVGENQL------SG------SIPSQLGLLTRLETISLRSNSFTGEMPSELGD-IKQ 161 (885)
Q Consensus 95 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~ 161 (885)
|++|.+.|.+|+++++|++|++|+|++|.+ .+ .+|... +.+|+ +++++|.+.+.+|..+.. +..
T Consensus 88 L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~ 164 (636)
T 4eco_A 88 LEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKD 164 (636)
T ss_dssp CTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHH
T ss_pred ecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHH
Confidence 999999999999999999999999999976 33 445444 67788 999999999888887773 345
Q ss_pred CceEEccCCcCCccCCcccCCCCCCcccccc--ccccCCCCCcccccccccccEEEeecccCccc---------------
Q 047790 162 LKSLDFSGNGLNGTIPSRLGDLTQLQDLDLS--DNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGN--------------- 224 (885)
Q Consensus 162 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls--~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~--------------- 224 (885)
+..+++....+.. .....++.+.+. .|+++| +|.. ++++++|++|+|++|++++.
T Consensus 165 l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~ 236 (636)
T 4eco_A 165 CINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKA-VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQ 236 (636)
T ss_dssp HHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGG-GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHH
T ss_pred HhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHH-HhcccCCCEEECcCCccccccccccccccccchhc
Confidence 5666666554431 223445555554 588886 8876 88899999999999999874
Q ss_pred --CCcccc--CCCcccceecccccccccccccccCccccCCCCCcEEEecCCc-ccc-cccccccCC------CCCcEEE
Q 047790 225 --IPPEIG--NLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNK-LSG-PIPRELCNS------GSLVEIN 292 (885)
Q Consensus 225 --~p~~~~--~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~-l~~-~~p~~l~~l------~~L~~L~ 292 (885)
+|..++ ++++|++|+++.|.. .+.+|..++++++|++|++++|+ ++| .+|..++.+ ++|++|+
T Consensus 237 ~~ip~~l~~~~l~~L~~L~L~~n~l-----~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~ 311 (636)
T 4eco_A 237 QYKTEDLKWDNLKDLTDVEVYNCPN-----LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIY 311 (636)
T ss_dssp HHTTSCCCGGGCTTCCEEEEECCTT-----CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEE
T ss_pred ccCchhhhhcccCCCCEEEecCCcC-----CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEE
Confidence 555555 555555555533321 34445555555555555555555 555 455555443 5555555
Q ss_pred ccCCCCcCcccc--cccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccc-cceeeccccc
Q 047790 293 LDGNMLSGTIED--VFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSEN-LMEFNAASNL 368 (885)
Q Consensus 293 L~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~N~ 368 (885)
|++|+++ .+|. .+..+++|++|++++|+++|.+| .+..+ .|++|++++|+++ .+|..+..+++ |++|++++|.
T Consensus 312 L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 388 (636)
T 4eco_A 312 IGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNK 388 (636)
T ss_dssp CCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSC
T ss_pred CCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCc
Confidence 5555555 3333 45555555555555555555555 33333 4555555555555 44445555555 5555555555
Q ss_pred ccCCCcccccccc--cccEEEccCCcccccCccccc-------ccccccceecccccccCcCCCccCCCCcccEEEcCCc
Q 047790 369 LEGSLSWEISNAV--ALEKLDLSSNMLTRQIPKKIG-------NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439 (885)
Q Consensus 369 l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 439 (885)
++ .+|..+.... +|++|++++|++++..|..+. .+++|+.|+|++|+++++.+..+..+++|++|+|++|
T Consensus 389 l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N 467 (636)
T 4eco_A 389 LK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGN 467 (636)
T ss_dssp CS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSS
T ss_pred Cc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCC
Confidence 55 3444444332 455555555555555555554 4455555555555555333333344555555555555
Q ss_pred ccCcceeEEEEeecCCcccCCCchhc--------ccCCCCCEEeccCccccCCCCCCcc--cccccceeeeccccceecc
Q 047790 440 NLNGCVVVVYLLLNNNMLSGKIPGSL--------SRLTNLTTLNLFGNLLTGSIPPEFG--DSLKVQGLYLGHNQLTGSI 509 (885)
Q Consensus 440 ~l~~~~~~~~l~l~~n~l~~~~p~~l--------~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~g~~ 509 (885)
+++ .+|... .++++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +
T Consensus 468 ~l~-----------------~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-i 528 (636)
T 4eco_A 468 MLT-----------------EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-F 528 (636)
T ss_dssp CCS-----------------BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-C
T ss_pred CCC-----------------CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-c
Confidence 553 222221 12226666666666666 4555554 66666666666666653 2
Q ss_pred ccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCcc
Q 047790 510 PESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEK 589 (885)
Q Consensus 510 p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~ 589 (885)
|..+..+++|+.|+|++|+ ++++|++.+.+|.+++++++|++|+|++|++ +.+|..
T Consensus 529 ----------------p~~~~~l~~L~~L~Ls~N~-------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~ 584 (636)
T 4eco_A 529 ----------------PTQPLNSSTLKGFGIRNQR-------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK 584 (636)
T ss_dssp ----------------CCGGGGCSSCCEEECCSCB-------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC
T ss_pred ----------------ChhhhcCCCCCEEECCCCc-------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh
Confidence 5566666677777776665 2236666666676676677777777777777 466666
Q ss_pred ccCccccceeecccCcCCC
Q 047790 590 LCSLPYLLYLNLADNRLEG 608 (885)
Q Consensus 590 l~~l~~L~~L~l~~N~l~~ 608 (885)
+. ++|++|++++|++..
T Consensus 585 ~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 585 IT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CC--TTCCEEECCSCTTCE
T ss_pred Hh--CcCCEEECcCCCCcc
Confidence 54 566777777776653
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-50 Score=470.78 Aligned_cols=488 Identities=23% Similarity=0.215 Sum_probs=379.2
Q ss_pred cccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccC
Q 047790 79 PVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGD 158 (885)
Q Consensus 79 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 158 (885)
.+|..+. +++++|||++|.+++..+..|.++++|++|+|++|++++..|..|+.+++|++|+|++|++++..|.+|++
T Consensus 21 ~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (570)
T 2z63_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (570)
T ss_dssp SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcC
Confidence 3555442 56888999999888877888888888999999888888777788888888888888888888777788888
Q ss_pred CccCceEEccCCcCCccCCcccCCCCCCccccccccccCC-CCCcccccccccccEEEeecccCcccCCccccCCCcccc
Q 047790 159 IKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSG-SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSD 237 (885)
Q Consensus 159 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 237 (885)
+++|++|++++|++++..+..|+++++|++|++++|.+++ .+|.. +.++++|++|++++|++++..|..++
T Consensus 99 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~------- 170 (570)
T 2z63_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY-FSNLTNLEHLDLSSNKIQSIYCTDLR------- 170 (570)
T ss_dssp CTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGG-GGGCTTCCEEECTTSCCCEECGGGGH-------
T ss_pred ccccccccccccccccCCCccccccccccEEecCCCccceecChhh-hcccCCCCEEeCcCCccceecHHHcc-------
Confidence 8888888888888886666578888888888888888874 35655 78888888888888888754444433
Q ss_pred eecccccccccccccccCccccCCCCC----cEEEecCCcccccccccccCCCCCcEEEccCCCCcC-cccccccccCCc
Q 047790 238 LYLGIGPYQLSLFVGRITPEIGNCSML----KYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSG-TIEDVFDRCTNL 312 (885)
Q Consensus 238 L~l~~n~~~~~~~~~~~~~~l~~l~~L----~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L 312 (885)
.+++| +.|++++|.+++..|..+... +|+.|++++|.... ..+..+..++++
T Consensus 171 ----------------------~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l 227 (570)
T 2z63_A 171 ----------------------VLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGL 227 (570)
T ss_dssp ----------------------HHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTC
T ss_pred ----------------------chhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCcccc
Confidence 33444 799999999998888877766 89999999986542 345556677777
Q ss_pred ceeeccccccCC------CCC---cccCCCCceeEEeecC-ccccccCccccCccccceeecccccccCCCccccccccc
Q 047790 313 SELVLVNNRISG------SIP---EYISELPLKVFDLQYN-NFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVA 382 (885)
Q Consensus 313 ~~L~Ls~N~l~~------~~p---~~~~~~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 382 (885)
+.+.+..+.+.. ... ..+..+.++.++++++ .+.+..|..+..+++|+.|++++|.+.+ +|..+..+ +
T Consensus 228 ~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~ 305 (570)
T 2z63_A 228 EVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-G 305 (570)
T ss_dssp EEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-C
T ss_pred ceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-C
Confidence 766655433221 111 1222335778888888 7788888888888888888888888874 66667777 8
Q ss_pred ccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcce----------eEEEEee
Q 047790 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCV----------VVVYLLL 452 (885)
Q Consensus 383 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~----------~~~~l~l 452 (885)
|++|++++|.++ .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. .++.|++
T Consensus 306 L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l 380 (570)
T 2z63_A 306 WQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDL 380 (570)
T ss_dssp CSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEEC
T ss_pred ccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEEC
Confidence 888888888887 4444 4678888888888888766554 67888888888888887543 2356677
Q ss_pred cCCcccCCCchhcccCCCCCEEeccCccccCCCC-CCcccccccceeeeccccceeccccccccccCCccCCCCCccccc
Q 047790 453 NNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIP-PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGN 531 (885)
Q Consensus 453 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~ 531 (885)
++|.+++..+. +..+++|+.|++++|.+++..| ..+..+++|+.|++++|++++.+ |..|..
T Consensus 381 ~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~----------------~~~~~~ 443 (570)
T 2z63_A 381 SFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF----------------NGIFNG 443 (570)
T ss_dssp CSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECC----------------TTTTTT
T ss_pred CCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccc----------------hhhhhc
Confidence 77777654444 7788888888888888876655 46778888888888888877644 778888
Q ss_pred cccCcEEEccCCCCCCceeeeecccccc-cccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCC
Q 047790 532 LNGLTHLDLSCNELDGIVGLYVQSNKFY-GEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEV 610 (885)
Q Consensus 532 l~~L~~L~Ls~N~l~~~~~l~~~~n~l~-g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~ 610 (885)
+++|+.|+|++|+ ++ +.+|..++.+++|++|++++|++++.+|..+..+++|++|++++|++++.+
T Consensus 444 l~~L~~L~l~~n~-------------l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 510 (570)
T 2z63_A 444 LSSLEVLKMAGNS-------------FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510 (570)
T ss_dssp CTTCCEEECTTCE-------------EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCcEEECcCCc-------------CccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCC
Confidence 9999999999554 44 578999999999999999999999888999999999999999999999987
Q ss_pred CC-CccccccccccccCCccccccccCCccccc
Q 047790 611 PR-SGICQNLSIISLTGNKDLCEKIMGSDCQIL 642 (885)
Q Consensus 611 p~-~~~~~~~~~~~~~~N~~~c~~~~~~~c~~~ 642 (885)
|. ...+.+++.+++.+||+.| +|...
T Consensus 511 ~~~~~~l~~L~~L~l~~N~~~~------~~~~~ 537 (570)
T 2z63_A 511 DGIFDRLTSLQKIWLHTNPWDC------SCPRI 537 (570)
T ss_dssp TTTTTTCTTCCEEECCSSCBCC------CTTTT
T ss_pred HHHhhcccCCcEEEecCCcccC------CCcch
Confidence 75 3678899999999999999 67643
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-49 Score=462.91 Aligned_cols=452 Identities=19% Similarity=0.192 Sum_probs=339.3
Q ss_pred EEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCc
Q 047790 92 ILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNG 171 (885)
Q Consensus 92 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 171 (885)
+.|++++.++ .+|+.+. ++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|+.+++|++|+|++|+
T Consensus 9 ~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 85 (549)
T 2z81_A 9 VCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNH 85 (549)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred eEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCc
Confidence 3567777775 4555543 677788888887777667777777777777777777777667777777777777777777
Q ss_pred CCccCCcccCCCCCCccccccccccCC-CCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccccc
Q 047790 172 LNGTIPSRLGDLTQLQDLDLSDNLLSG-SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLF 250 (885)
Q Consensus 172 l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 250 (885)
+++..|..|+++++|++|+|++|++++ .+|. .++++++|++|++++|++.+.+|
T Consensus 86 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-~~~~l~~L~~L~L~~n~~~~~~~------------------------ 140 (549)
T 2z81_A 86 LSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTS-LFPNLTNLQTLRIGNVETFSEIR------------------------ 140 (549)
T ss_dssp CCSCCHHHHTTCTTCCEEECTTCCCSSSCSSC-SCTTCTTCCEEEEEESSSCCEEC------------------------
T ss_pred cCccCHHHhccCCCCcEEECCCCcccccchhh-hhhccCCccEEECCCCccccccC------------------------
Confidence 776666667777777777777777763 2233 36777777777777776432222
Q ss_pred ccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCC--Cc
Q 047790 251 VGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSI--PE 328 (885)
Q Consensus 251 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--p~ 328 (885)
+..++.+++|++|++++|++++..|..+..+++|++|++++|.+...+...+..+++|++|++++|++++.. |.
T Consensus 141 ----~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 216 (549)
T 2z81_A 141 ----RIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPL 216 (549)
T ss_dssp ----TTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCC
T ss_pred ----HhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccccccccc
Confidence 124556677888888888888878888888888888888888877665555566888888888888887642 22
Q ss_pred cc-CCC-CceeEEeecCccccccCcc----ccCccccceeecccccccCCC------cccccccccccEEEccCCccccc
Q 047790 329 YI-SEL-PLKVFDLQYNNFTGVIPVS----LWNSENLMEFNAASNLLEGSL------SWEISNAVALEKLDLSSNMLTRQ 396 (885)
Q Consensus 329 ~~-~~~-~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~~~~------~~~~~~l~~L~~L~Ls~N~l~~~ 396 (885)
.+ ... .++.|++++|.+++..+.. +..+++|+.+++++|.+.+.. ...+..+.+|+.|++.++.+...
T Consensus 217 ~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~ 296 (549)
T 2z81_A 217 PVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQF 296 (549)
T ss_dssp SSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCG
T ss_pred chhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchh
Confidence 22 122 6888888888887755443 356678899999998887642 23356778899999999987642
Q ss_pred -----CcccccccccccceecccccccCcCCCcc-CCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCc---hhccc
Q 047790 397 -----IPKKIGNLTNIQILKLNSNFFDGIIPMEF-GDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP---GSLSR 467 (885)
Q Consensus 397 -----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p---~~l~~ 467 (885)
.+..+...++|+.|++++|+++ .+|..+ ..+++|++|++++|++++ .+| ..++.
T Consensus 297 ~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~----------------~~~~~~~~~~~ 359 (549)
T 2z81_A 297 YLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVE----------------EYLKNSACKGA 359 (549)
T ss_dssp GGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCH----------------HHHHHHTCTTS
T ss_pred hhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCcccc----------------ccccchhhhhc
Confidence 1222344678999999999998 566655 679999999999999863 333 34788
Q ss_pred CCCCCEEeccCccccCCCC--CCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCC
Q 047790 468 LTNLTTLNLFGNLLTGSIP--PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNEL 545 (885)
Q Consensus 468 l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 545 (885)
+++|+.|++++|++++..+ ..+..+++|+.|++++|+++ .+|..+..+++|+.|+|++|++
T Consensus 360 l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-----------------~lp~~~~~~~~L~~L~Ls~N~l 422 (549)
T 2z81_A 360 WPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-----------------PMPDSCQWPEKMRFLNLSSTGI 422 (549)
T ss_dssp STTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-----------------CCCSCCCCCTTCCEEECTTSCC
T ss_pred cccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-----------------cCChhhcccccccEEECCCCCc
Confidence 9999999999999985432 45889999999999999998 3477888999999999998887
Q ss_pred CCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCcccccccccccc
Q 047790 546 DGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLT 625 (885)
Q Consensus 546 ~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~ 625 (885)
+. +|..+ .++|++|||++|++++.+ ..+++|++|++++|+|+ .+|....+.+++.++++
T Consensus 423 ~~--------------l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls 481 (549)
T 2z81_A 423 RV--------------VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPDASLFPVLLVMKIS 481 (549)
T ss_dssp SC--------------CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCCGGGCTTCCEEECC
T ss_pred cc--------------ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCCcccCccCCEEecC
Confidence 63 33333 258999999999999643 47899999999999998 56767788899999999
Q ss_pred CCccc
Q 047790 626 GNKDL 630 (885)
Q Consensus 626 ~N~~~ 630 (885)
+|...
T Consensus 482 ~N~l~ 486 (549)
T 2z81_A 482 RNQLK 486 (549)
T ss_dssp SSCCC
T ss_pred CCccC
Confidence 99754
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-49 Score=477.15 Aligned_cols=466 Identities=19% Similarity=0.208 Sum_probs=270.1
Q ss_pred CCCCEEecCCCcccCcCCcCccCcCCCCEEec-cCCcCCCCCCcccccc----cc-----ccEe------ee-eccCCC-
Q 047790 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSV-GENQLSGSIPSQLGLL----TR-----LETI------SL-RSNSFT- 149 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L-~~n~l~~~~p~~~~~l----~~-----L~~L------~L-s~N~l~- 149 (885)
.+++.|+|++|.+.|.+|+.|++|++|++|+| ++|.++|..|-.-... +. ++.. +. ....+.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46889999999999999999999999999999 9998887744321111 00 0000 00 000000
Q ss_pred ----------CCCCccccCCccCceEEccC--CcCCccCCcccCCCCCCccccccccccCC-----------------CC
Q 047790 150 ----------GEMPSELGDIKQLKSLDFSG--NGLNGTIPSRLGDLTQLQDLDLSDNLLSG-----------------SL 200 (885)
Q Consensus 150 ----------~~~p~~l~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~ 200 (885)
...+........++.+.+.. |++++ +|..|+++++|++|+|++|+++| .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 00000111112233333332 44444 44445555555555555555543 25
Q ss_pred Cccc-ccccccccEEEeecccCcccCCccccCCCcccceeccccccccccccc-ccCcccc-------CCCCCcEEEecC
Q 047790 201 PVSL-LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVG-RITPEIG-------NCSMLKYISLSN 271 (885)
Q Consensus 201 p~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~-~~~~~l~-------~l~~L~~L~Ls~ 271 (885)
|..+ |.++++|++|+|++|++.+.+|..++++++|+.|+++.|. .+.| .+|..++ .+++|++|++++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~----~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~ 557 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR----GISAAQLKADWTRLADDEDTGPKIQIFYMGY 557 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT----TSCHHHHHHHHHHHHHCTTTTTTCCEEECCS
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC----CcccccchHHHHhhhhcccccCCccEEEeeC
Confidence 5552 2256666666666666655555555555444444443222 0122 3333333 334677777777
Q ss_pred Ccccccccc--cccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-C-ceeEEeecCcccc
Q 047790 272 NKLSGPIPR--ELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-P-LKVFDLQYNNFTG 347 (885)
Q Consensus 272 N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~-L~~L~Ls~N~l~~ 347 (885)
|+++ .+|. .+..+++|+.|+|++|.++ .+| .|..+++|+.|+|++|+++ .+|..+..+ . |+.|++++|+++
T Consensus 558 N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~- 632 (876)
T 4ecn_A 558 NNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK- 632 (876)
T ss_dssp SCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-
T ss_pred CcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-
Confidence 7776 5666 6666667777777777666 344 5666666666666666666 444444433 3 555555555555
Q ss_pred ccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccc---c--ccccccceecccccccCcCC
Q 047790 348 VIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI---G--NLTNIQILKLNSNFFDGIIP 422 (885)
Q Consensus 348 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~p 422 (885)
.+|..+..+.. ++|+.|+|++|++++.+|... . .+++|+.|+|++|+++.+.+
T Consensus 633 ~lp~~~~~~~~----------------------~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~ 690 (876)
T 4ecn_A 633 YIPNIFNAKSV----------------------YVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPT 690 (876)
T ss_dssp SCCSCCCTTCS----------------------SCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCH
T ss_pred cCchhhhcccc----------------------CCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCH
Confidence 33433333221 125555555555554433221 1 22356666666666653222
Q ss_pred CccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchh--------cccCCCCCEEeccCccccCCCCCCcc--cc
Q 047790 423 MEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGS--------LSRLTNLTTLNLFGNLLTGSIPPEFG--DS 492 (885)
Q Consensus 423 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~--------l~~l~~L~~L~Ls~N~l~~~~p~~~~--~l 492 (885)
..+..+++|+.|+|++|+|+ .+|.. +.++++|+.|+|++|+++ .+|..+. .+
T Consensus 691 ~~~~~l~~L~~L~Ls~N~L~-----------------~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l 752 (876)
T 4ecn_A 691 ELFATGSPISTIILSNNLMT-----------------SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTL 752 (876)
T ss_dssp HHHHTTCCCSEEECCSCCCS-----------------CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTC
T ss_pred HHHccCCCCCEEECCCCcCC-----------------ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccC
Confidence 23335566666666666554 22222 223447778888888777 6777776 77
Q ss_pred cccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccc
Q 047790 493 LKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQL 572 (885)
Q Consensus 493 ~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L 572 (885)
++|+.|+|++|++++ + |..+..+++|+.|+|++|+ ++++|++.+.+|..++++++|
T Consensus 753 ~~L~~L~Ls~N~L~~-l----------------p~~l~~L~~L~~L~Ls~N~-------~ls~N~l~~~ip~~l~~L~~L 808 (876)
T 4ecn_A 753 PYLSNMDVSYNCFSS-F----------------PTQPLNSSQLKAFGIRHQR-------DAEGNRILRQWPTGITTCPSL 808 (876)
T ss_dssp TTCCEEECCSSCCSS-C----------------CCGGGGCTTCCEEECCCCB-------CTTCCBCCCCCCTTGGGCSSC
T ss_pred CCcCEEEeCCCCCCc-c----------------chhhhcCCCCCEEECCCCC-------CcccccccccChHHHhcCCCC
Confidence 788888888887774 3 6677788888888888776 334788888888888888888
Q ss_pred cccccccccCCCCCCccccCccccceeecccCcCCCCCCCCcccc--ccccccccCCcccc
Q 047790 573 EYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQ--NLSIISLTGNKDLC 631 (885)
Q Consensus 573 ~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~--~~~~~~~~~N~~~c 631 (885)
++|+|++|++ +.||..+. ++|+.|||++|++....+. ..+. ......+.+|+..|
T Consensus 809 ~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~-~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 809 IQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVT-SVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp CEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECG-GGHHHHHTTCCEEECCTTSE
T ss_pred CEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChH-HccccccchheeecCCCccc
Confidence 8888888888 58888865 6888999999988754332 2222 23456667776654
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-50 Score=464.34 Aligned_cols=454 Identities=19% Similarity=0.220 Sum_probs=306.4
Q ss_pred EEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccC
Q 047790 68 SLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNS 147 (885)
Q Consensus 68 ~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 147 (885)
.+++++++++ .+|..+. ++|++|||++|.+++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 4677777777 4676655 778888888888877666777888888888888888877667778888888888888888
Q ss_pred CCCCCCccccCCccCceEEccCCcCCc-cCCcccCCCCCCccccccccccCCCCCcccccccccc--cEEEeecccC--c
Q 047790 148 FTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSL--SYLDVSNNLL--S 222 (885)
Q Consensus 148 l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L--~~L~Ls~N~l--~ 222 (885)
++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++ ..+..+++| ++|++++|++ +
T Consensus 81 l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 81 LV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred ee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch----hhccccccceeeEEEeeccccccc
Confidence 77 45555 67788888888888776 467777888888888888887763 235666777 8888888877 6
Q ss_pred ccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccc-cccCCCCCcEEEccCCC----
Q 047790 223 GNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPR-ELCNSGSLVEINLDGNM---- 297 (885)
Q Consensus 223 ~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~L~~N~---- 297 (885)
+..|..+..+.. +.+ .+++++|++.+.++. .+..+++|+.|++++|.
T Consensus 154 ~~~~~~l~~l~~-~~l---------------------------~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 205 (520)
T 2z7x_B 154 KEDPEGLQDFNT-ESL---------------------------HIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNK 205 (520)
T ss_dssp SCCTTTTTTCCE-EEE---------------------------EEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTT
T ss_pred cccccccccccc-ceE---------------------------EEEeccCcchhhhhhhhhhcccceeeccccccccccc
Confidence 666666665542 222 223333433332221 23334444444444443
Q ss_pred ---CcCcccccccccCCcceeeccccccCCCCCcc----cCCCCceeEEeecCccccccCccc-----cCccccceeecc
Q 047790 298 ---LSGTIEDVFDRCTNLSELVLVNNRISGSIPEY----ISELPLKVFDLQYNNFTGVIPVSL-----WNSENLMEFNAA 365 (885)
Q Consensus 298 ---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~l~ 365 (885)
+.+.++ .+..+++|+.|++++|.+++..+.. .....|++|++++|+++|.+|..+ ..+++|+.++++
T Consensus 206 ~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~ 284 (520)
T 2z7x_B 206 CSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVV 284 (520)
T ss_dssp THHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEE
T ss_pred cceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEecccc
Confidence 333333 3444455555555554444321111 111245666666666665666655 666677777777
Q ss_pred cccccCCCc-cccccc---ccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCccc
Q 047790 366 SNLLEGSLS-WEISNA---VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL 441 (885)
Q Consensus 366 ~N~l~~~~~-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 441 (885)
+|.+ .+| ..+..+ .+|+.|++++|++.... .+..+++|++|++++|++++.+|..+..+++|++|++++|++
T Consensus 285 ~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 360 (520)
T 2z7x_B 285 SDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQL 360 (520)
T ss_dssp ECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCC
T ss_pred ccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCcc
Confidence 7766 333 334433 56888888888876432 125778888888888888888888888888888888888887
Q ss_pred CcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCC-cccccccceeeeccccceeccccccccccCCc
Q 047790 442 NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE-FGDSLKVQGLYLGHNQLTGSIPESLGYLSGNK 520 (885)
Q Consensus 442 ~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~ 520 (885)
++.. .+|..+..+++|++|++++|++++.+|.. +..+++|+.|++++|++++.+|
T Consensus 361 ~~l~--------------~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~---------- 416 (520)
T 2z7x_B 361 KELS--------------KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF---------- 416 (520)
T ss_dssp CBHH--------------HHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGG----------
T ss_pred Cccc--------------cchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchh----------
Confidence 5321 45677888888888888888888756654 7778888888888888876553
Q ss_pred cCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCcc-ccCcccccee
Q 047790 521 LYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEK-LCSLPYLLYL 599 (885)
Q Consensus 521 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~-l~~l~~L~~L 599 (885)
..+. ++|+.|+|++|+++ .+|..+..+++|++|+|++|+++ .+|.. +..+++|++|
T Consensus 417 ------~~l~--~~L~~L~Ls~N~l~--------------~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L 473 (520)
T 2z7x_B 417 ------RCLP--PRIKVLDLHSNKIK--------------SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKI 473 (520)
T ss_dssp ------GSCC--TTCCEEECCSSCCC--------------CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ------hhhc--ccCCEEECCCCccc--------------ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEE
Confidence 3332 67888888866554 67777778888888888888888 56665 7788888888
Q ss_pred ecccCcCCCCCC
Q 047790 600 NLADNRLEGEVP 611 (885)
Q Consensus 600 ~l~~N~l~~~~p 611 (885)
++++|++++..+
T Consensus 474 ~l~~N~~~c~c~ 485 (520)
T 2z7x_B 474 WLHTNPWDCSCP 485 (520)
T ss_dssp ECCSSCBCCCHH
T ss_pred ECcCCCCcccCC
Confidence 888888877554
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-49 Score=461.61 Aligned_cols=457 Identities=21% Similarity=0.197 Sum_probs=371.0
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
++||+++|.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57899999887 5777666 88899999999988777788888899999999999988777888888889999999999
Q ss_pred cCCccCCcccCCCCCCccccccccccCC-CCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccc
Q 047790 171 GLNGTIPSRLGDLTQLQDLDLSDNLLSG-SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSL 249 (885)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~ 249 (885)
+|+ .+|.. .+++|++|+|++|++++ .+|.. ++++++|++|++++|++++ ..
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~-~~~l~~L~~L~L~~n~l~~---~~--------------------- 131 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKE-FGNMSQLKFLGLSTTHLEK---SS--------------------- 131 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGG-GGGCTTCCEEEEEESSCCG---GG---------------------
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhh-hccCCcceEEEecCcccch---hh---------------------
Confidence 888 55655 78888888888888874 34544 7888888888888888763 11
Q ss_pred cccccCccccCCCCC--cEEEecCCcc--cccccccccCCC-CCcEEEccCCCCcCccc-ccccccCCcceeeccccc--
Q 047790 250 FVGRITPEIGNCSML--KYISLSNNKL--SGPIPRELCNSG-SLVEINLDGNMLSGTIE-DVFDRCTNLSELVLVNNR-- 321 (885)
Q Consensus 250 ~~~~~~~~l~~l~~L--~~L~Ls~N~l--~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~-- 321 (885)
+..+++| ++|++++|++ ++..|..+..+. +...+++++|.+.+..+ ..+..+++|+.|++++|.
T Consensus 132 --------~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 203 (520)
T 2z7x_B 132 --------VLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLED 203 (520)
T ss_dssp --------GGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCST
T ss_pred --------ccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccc
Confidence 2334455 9999999999 788888887765 35567889998876544 467889999999999997
Q ss_pred -----cCCCCCcccCCC-CceeEEeecCccccccCcccc---CccccceeecccccccCCCcccc-----cccccccEEE
Q 047790 322 -----ISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLW---NSENLMEFNAASNLLEGSLSWEI-----SNAVALEKLD 387 (885)
Q Consensus 322 -----l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~ 387 (885)
+.+.+| .+..+ .|+.|++++|.+++..+..+. ..++|++|++++|.+.+.+|..+ ..+++|+.++
T Consensus 204 ~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~ 282 (520)
T 2z7x_B 204 NKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQ 282 (520)
T ss_dssp TTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEE
T ss_pred cccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEecc
Confidence 666666 34444 799999999998875443322 23589999999999998888888 8999999999
Q ss_pred ccCCcccccCc-cccccc---ccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCch
Q 047790 388 LSSNMLTRQIP-KKIGNL---TNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPG 463 (885)
Q Consensus 388 Ls~N~l~~~~p-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~ 463 (885)
+++|.+ .+| ..+..+ ++|+.|++++|.+.+.. .+..+++|++|++++|+++ +.+|.
T Consensus 283 l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~----------------~~~~~ 342 (520)
T 2z7x_B 283 VVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLT----------------DTVFE 342 (520)
T ss_dssp EEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCC----------------TTTTT
T ss_pred ccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccC----------------hhhhh
Confidence 999999 355 566655 67999999999987532 2368889999999988875 46788
Q ss_pred hcccCCCCCEEeccCccccC--CCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEcc
Q 047790 464 SLSRLTNLTTLNLFGNLLTG--SIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLS 541 (885)
Q Consensus 464 ~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls 541 (885)
.++.+++|+.|++++|++++ .+|..+..+++|+.|++++|++++.+| +..|..+++|+.|+|+
T Consensus 343 ~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~---------------~~~~~~l~~L~~L~Ls 407 (520)
T 2z7x_B 343 NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEK---------------KGDCSWTKSLLSLNMS 407 (520)
T ss_dssp TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGG---------------GCSCCCCTTCCEEECC
T ss_pred hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccc---------------cchhccCccCCEEECc
Confidence 89999999999999999996 566789999999999999999997553 2357889999999999
Q ss_pred CCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCC-Cccccccc
Q 047790 542 CNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPR-SGICQNLS 620 (885)
Q Consensus 542 ~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~ 620 (885)
+|+ +++.+|..+. ++|++|+|++|+++ .+|..+..+++|++|++++|++++.++. ...+.+++
T Consensus 408 ~N~-------------l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~ 471 (520)
T 2z7x_B 408 SNI-------------LTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQ 471 (520)
T ss_dssp SSC-------------CCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCC-------------CCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCccc
Confidence 555 4456777664 79999999999999 8999999999999999999999975554 56678899
Q ss_pred cccccCCccccccccCCccccccc
Q 047790 621 IISLTGNKDLCEKIMGSDCQILTF 644 (885)
Q Consensus 621 ~~~~~~N~~~c~~~~~~~c~~~~~ 644 (885)
.+++++||+.| +|...|+
T Consensus 472 ~L~l~~N~~~c------~c~~~~~ 489 (520)
T 2z7x_B 472 KIWLHTNPWDC------SCPRIDY 489 (520)
T ss_dssp EEECCSSCBCC------CHHHHHH
T ss_pred EEECcCCCCcc------cCCchHH
Confidence 99999999999 8987765
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-48 Score=462.48 Aligned_cols=538 Identities=21% Similarity=0.190 Sum_probs=382.2
Q ss_pred CCCCCCCCCCCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccC
Q 047790 42 QVLSGWNKTTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGE 121 (885)
Q Consensus 42 ~~~~~w~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 121 (885)
+.+++|.... +..|....|.... +.++-++.+++ .||+.+- +++++|||++|.|++..+..|+++++|++|+|++
T Consensus 11 ~~~~~~~~~~-p~~~~~c~~~~~~-~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~ 85 (635)
T 4g8a_A 11 DKLAAANSSI-PESWEPCVEVVPN-ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSR 85 (635)
T ss_dssp ---------------CCSEEEETT-TEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred chhhcccCCC-CCCCCCccccCCC-CEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCC
Confidence 3566665332 2335443332221 11233344555 4665442 4789999999999988888999999999999999
Q ss_pred CcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCC
Q 047790 122 NQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201 (885)
Q Consensus 122 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 201 (885)
|+|++..|.+|+++++|++|+|++|+|++..+.+|+++++|++|+|++|++++..+..|+++++|++|+|++|++++...
T Consensus 86 N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~ 165 (635)
T 4g8a_A 86 CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKL 165 (635)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCC
T ss_pred CcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCC
Confidence 99998778889999999999999999997777789999999999999999998777889999999999999999974322
Q ss_pred cccccccccccEEEeecccCcccCCccccCCCcccc----eecccccccccccccccCccccCCCCCcEEEecCCccccc
Q 047790 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSD----LYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGP 277 (885)
Q Consensus 202 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~----L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 277 (885)
...+..+++|++|++++|++++..|..+..+.+++. ++++.|. ...+++.......++.+++++|.....
T Consensus 166 ~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~------l~~i~~~~~~~~~~~~l~l~~n~~~~~ 239 (635)
T 4g8a_A 166 PEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP------MNFIQPGAFKEIRLHKLTLRNNFDSLN 239 (635)
T ss_dssp CGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC------CCEECTTTTTTCEEEEEEEESCCSSHH
T ss_pred chhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc------ccccCcccccchhhhhhhhhccccccc
Confidence 344888999999999999999888888887776654 4444333 233444444555667777777765432
Q ss_pred -ccccccCCCCCcEEEccCCC------CcCc---------------------------ccccccccCCcceeeccccccC
Q 047790 278 -IPRELCNSGSLVEINLDGNM------LSGT---------------------------IEDVFDRCTNLSELVLVNNRIS 323 (885)
Q Consensus 278 -~p~~l~~l~~L~~L~L~~N~------l~~~---------------------------~~~~~~~l~~L~~L~Ls~N~l~ 323 (885)
.+..+..+..++...+..+. +... ....+....+++.+++.+|.+.
T Consensus 240 ~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 319 (635)
T 4g8a_A 240 VMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIE 319 (635)
T ss_dssp HHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEE
T ss_pred ccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccc
Confidence 22334445555544442211 1111 1223444556666666666655
Q ss_pred CCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccc--cCcccc
Q 047790 324 GSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTR--QIPKKI 401 (885)
Q Consensus 324 ~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~ 401 (885)
...+ ......++.|++++|.+.+..+. .+..|+.+++..|.+.... ....+++|+.|++++|.+.. ..+..+
T Consensus 320 ~~~~-~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 393 (635)
T 4g8a_A 320 RVKD-FSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSD 393 (635)
T ss_dssp ECGG-GGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHH
T ss_pred cccc-cccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCCc--ccccccccccchhhccccccccccccch
Confidence 3322 11122567777777776655443 3455666677776655432 24466777777777777643 344555
Q ss_pred cccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccc
Q 047790 402 GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLL 481 (885)
Q Consensus 402 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 481 (885)
..+.+|+.|+++.|.+.. .+..+..+++|+.++++.|+.. ....+..+..+++++.++++.|.+
T Consensus 394 ~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~---------------~~~~~~~~~~l~~l~~l~ls~n~l 457 (635)
T 4g8a_A 394 FGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLK---------------QMSEFSVFLSLRNLIYLDISHTHT 457 (635)
T ss_dssp HSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEE---------------STTSSCTTTTCTTCCEEECTTSCC
T ss_pred hhhhhhhhhhcccccccc-ccccccccccccchhhhhcccc---------------cccccccccccccccccccccccc
Confidence 666777777777777764 4556777777777777776653 123345678899999999999999
Q ss_pred cCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccc
Q 047790 482 TGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGE 561 (885)
Q Consensus 482 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ 561 (885)
++..|..+..+++|+.|++++|++.+.+ .|..|..+++|+.|||++|++ ++.
T Consensus 458 ~~~~~~~~~~~~~L~~L~Ls~N~~~~~~---------------~~~~~~~l~~L~~L~Ls~N~L-------------~~l 509 (635)
T 4g8a_A 458 RVAFNGIFNGLSSLEVLKMAGNSFQENF---------------LPDIFTELRNLTFLDLSQCQL-------------EQL 509 (635)
T ss_dssp EECCTTTTTTCTTCCEEECTTCEEGGGE---------------ECSCCTTCTTCCEEECTTSCC-------------CEE
T ss_pred ccccccccccchhhhhhhhhhccccccc---------------CchhhhhccccCEEECCCCcc-------------CCc
Confidence 9888999999999999999999865432 378899999999999995554 556
Q ss_pred cchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC-ccc-cccccccccCCccccccccCCcc
Q 047790 562 IPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GIC-QNLSIISLTGNKDLCEKIMGSDC 639 (885)
Q Consensus 562 ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~-~~~~~~~~~~N~~~c~~~~~~~c 639 (885)
+|..|+++++|++|+|++|+|++..|..+..+++|++|||++|+|++.+|.. ..+ .+++.+++++|||.| ||
T Consensus 510 ~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C------~C 583 (635)
T 4g8a_A 510 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC------TC 583 (635)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC------SG
T ss_pred ChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc------cC
Confidence 6889999999999999999999888888999999999999999999988865 333 678999999999999 99
Q ss_pred ccccccc
Q 047790 640 QILTFGK 646 (885)
Q Consensus 640 ~~~~~~~ 646 (885)
...|+..
T Consensus 584 ~~~~~~~ 590 (635)
T 4g8a_A 584 EHQSFLQ 590 (635)
T ss_dssp GGHHHHH
T ss_pred CcHHHHH
Confidence 9888653
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=442.60 Aligned_cols=456 Identities=20% Similarity=0.213 Sum_probs=315.3
Q ss_pred EEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeecc
Q 047790 67 VSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSN 146 (885)
Q Consensus 67 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 146 (885)
..++++++++++ +|..+. ++|++|||++|.+++..|..|+++++|++|+|++|++++..|+.|+.+++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 678888888885 777664 88999999999998888889999999999999999999888889999999999999999
Q ss_pred CCCCCCCccccCCccCceEEccCCcCCc-cCCcccCCCCCCccccccccccCCCCCcccccccccc--cEEEeecccC--
Q 047790 147 SFTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSL--SYLDVSNNLL-- 221 (885)
Q Consensus 147 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L--~~L~Ls~N~l-- 221 (885)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++ .+ +..+++| ++|++++|++
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~-~~---~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ-LD---LLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT-TT---TGGGTTSCEEEEEEEESSCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc-Cc---hhhhhhceeeEEEeecccccc
Confidence 998 66766 78999999999999986 346789999999999999999974 22 4555666 9999999999
Q ss_pred cccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccc-cccCCCCCcEEEccCCC---
Q 047790 222 SGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPR-ELCNSGSLVEINLDGNM--- 297 (885)
Q Consensus 222 ~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~L~~N~--- 297 (885)
++..|..+..++. +.+. +++++|.+.+.++. .+..+++|+.+++++|+
T Consensus 184 ~~~~~~~l~~l~~-~~l~---------------------------l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 235 (562)
T 3a79_B 184 KGGETESLQIPNT-TVLH---------------------------LVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENC 235 (562)
T ss_dssp CSSSCCEEEECCE-EEEE---------------------------EEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTH
T ss_pred cccCcccccccCc-ceEE---------------------------EEecCccchhhhhhhcccccceEEEeccccccccc
Confidence 7777777766542 2222 23333333332221 22333444444444442
Q ss_pred --CcCcccccccccCCcceeeccccccCCC----CCcccCCCCceeEEeecCccccccCccc-----cCccccceeeccc
Q 047790 298 --LSGTIEDVFDRCTNLSELVLVNNRISGS----IPEYISELPLKVFDLQYNNFTGVIPVSL-----WNSENLMEFNAAS 366 (885)
Q Consensus 298 --l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~l~~ 366 (885)
+.+. ...+..+++|+.|+++++.+.+. ++......+|++|++++|+++|.+|..+ ..++.|+.+++..
T Consensus 236 ~~l~~~-~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~ 314 (562)
T 3a79_B 236 QRLMTF-LSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKN 314 (562)
T ss_dssp HHHHHH-HHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEE
T ss_pred chHHHH-HHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccc
Confidence 1111 11234445555555554444321 1111112256666666666666666555 4555555555555
Q ss_pred ccccCCCc-ccccc---cccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccC
Q 047790 367 NLLEGSLS-WEISN---AVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN 442 (885)
Q Consensus 367 N~l~~~~~-~~~~~---l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 442 (885)
|.+ .+| ..+.. ..+|++|++++|.+.... ....+++|++|++++|++++.+|..+.++++|++|++++|+++
T Consensus 315 ~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 390 (562)
T 3a79_B 315 QVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK 390 (562)
T ss_dssp CCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCC
T ss_pred cee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcC
Confidence 555 222 22222 246888888888875322 1257788888888888888888888888888888888888875
Q ss_pred cceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCC-CcccccccceeeeccccceeccccccccccCCcc
Q 047790 443 GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPP-EFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKL 521 (885)
Q Consensus 443 ~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l 521 (885)
+.. .+|..+..+++|+.|++++|++++.+|. .+..+++|+.|++++|++++.+|
T Consensus 391 ~~~--------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----------- 445 (562)
T 3a79_B 391 NFF--------------KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF----------- 445 (562)
T ss_dssp BTT--------------HHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGG-----------
T ss_pred Ccc--------------cchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchh-----------
Confidence 221 3456678888888888888888875555 47778888888888888876553
Q ss_pred CCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCcc-ccCccccceee
Q 047790 522 YGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEK-LCSLPYLLYLN 600 (885)
Q Consensus 522 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~-l~~l~~L~~L~ 600 (885)
..+. ++|+.|+|++|+++ .+|..+..+++|++|+|++|+++ .+|.. +..+++|++|+
T Consensus 446 -----~~l~--~~L~~L~L~~N~l~--------------~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~ 503 (562)
T 3a79_B 446 -----RCLP--PKVKVLDLHNNRIM--------------SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIW 503 (562)
T ss_dssp -----SSCC--TTCSEEECCSSCCC--------------CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEE
T ss_pred -----hhhc--CcCCEEECCCCcCc--------------ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEE
Confidence 2222 57888888866654 66777778888888888888888 56665 77788888888
Q ss_pred cccCcCCCCCCC
Q 047790 601 LADNRLEGEVPR 612 (885)
Q Consensus 601 l~~N~l~~~~p~ 612 (885)
+++|++.+.+|.
T Consensus 504 l~~N~~~c~c~~ 515 (562)
T 3a79_B 504 LHDNPWDCTCPG 515 (562)
T ss_dssp CCSCCBCCCHHH
T ss_pred ecCCCcCCCcch
Confidence 888887765553
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=439.59 Aligned_cols=461 Identities=20% Similarity=0.184 Sum_probs=360.5
Q ss_pred CCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEcc
Q 047790 89 SLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168 (885)
Q Consensus 89 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 168 (885)
..+++|+++|++++ +|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 32 ~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 34889999999985 666654 789999999999998777889999999999999999998888889999999999999
Q ss_pred CCcCCccCCcccCCCCCCccccccccccCCCCCc-ccccccccccEEEeecccCcccCCccccCCCcccceecccccccc
Q 047790 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPV-SLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQL 247 (885)
Q Consensus 169 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 247 (885)
+|+|+ .+|.. .+++|++|+|++|+++ .+|. ..|+++++|++|++++|++++. .+..
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~-~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~---------------- 165 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLP---------------- 165 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCS-BCCCCGGGGGCTTCCEEEEECSBCCTT---TTGG----------------
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCcc-ccCchHhhcccCcccEEecCCCccccC---chhh----------------
Confidence 99998 56665 7889999999999987 4442 3488889999999999888631 1111
Q ss_pred cccccccCccccCCCCCcEEEecCCcc--cccccccccCCC-CCcEEEccCCCCcCcccc-cccccCCcceeeccccc--
Q 047790 248 SLFVGRITPEIGNCSMLKYISLSNNKL--SGPIPRELCNSG-SLVEINLDGNMLSGTIED-VFDRCTNLSELVLVNNR-- 321 (885)
Q Consensus 248 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l--~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~-- 321 (885)
+.++ +|++|++++|++ ++..|..+..+. ....+++++|.+.+..++ .+..+++|+.|++++|+
T Consensus 166 ----------l~~L-~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 234 (562)
T 3a79_B 166 ----------VAHL-HLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDEN 234 (562)
T ss_dssp ----------GTTS-CEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTT
T ss_pred ----------hhhc-eeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccc
Confidence 1222 359999999999 888888887765 223668899998875544 56788999999999985
Q ss_pred ---cCCCCCcccCCCCceeEEeecCccccccC----ccccCccccceeecccccccCCCcccc-----cccccccEEEcc
Q 047790 322 ---ISGSIPEYISELPLKVFDLQYNNFTGVIP----VSLWNSENLMEFNAASNLLEGSLSWEI-----SNAVALEKLDLS 389 (885)
Q Consensus 322 ---l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~Ls 389 (885)
+.+.++.......++.++++++.+++... ..+ ...+|++|++++|.+.+.+|..+ ..++.|+.++++
T Consensus 235 ~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~ 313 (562)
T 3a79_B 235 CQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVK 313 (562)
T ss_dssp HHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEE
T ss_pred cchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhcc
Confidence 22222221122257777777776654321 122 23489999999999998888877 778888888888
Q ss_pred CCcccccCc-cccccc---ccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhc
Q 047790 390 SNMLTRQIP-KKIGNL---TNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSL 465 (885)
Q Consensus 390 ~N~l~~~~p-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l 465 (885)
.|.+ .+| ..+..+ .+|+.|++++|.+.... ....+++|++|++++|+++ +.+|..+
T Consensus 314 ~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~----------------~~~~~~~ 373 (562)
T 3a79_B 314 NQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFT----------------DSVFQGC 373 (562)
T ss_dssp ECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCC----------------TTTTTTC
T ss_pred ccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccc----------------cchhhhh
Confidence 8887 344 344333 57999999999886432 2267889999999988874 4678899
Q ss_pred ccCCCCCEEeccCccccCC--CCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCC
Q 047790 466 SRLTNLTTLNLFGNLLTGS--IPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCN 543 (885)
Q Consensus 466 ~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 543 (885)
.++++|+.|++++|++++. +|..+..+++|+.|++++|++++.+| +..|..+++|+.|+|++|
T Consensus 374 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~---------------~~~~~~l~~L~~L~l~~n 438 (562)
T 3a79_B 374 STLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAY---------------DRTCAWAESILVLNLSSN 438 (562)
T ss_dssp CSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCS---------------SCCCCCCTTCCEEECCSS
T ss_pred cccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccC---------------hhhhcCcccCCEEECCCC
Confidence 9999999999999999963 35678999999999999999997553 345888999999999955
Q ss_pred CCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCC-Cccccccccc
Q 047790 544 ELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPR-SGICQNLSII 622 (885)
Q Consensus 544 ~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~ 622 (885)
+ +++.+|..+. ++|++|+|++|+++ .+|..+..+++|++|++++|+|++.++. ...+.+++.+
T Consensus 439 ~-------------l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 502 (562)
T 3a79_B 439 M-------------LTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYI 502 (562)
T ss_dssp C-------------CCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCE
T ss_pred C-------------CCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEE
Confidence 5 4456676654 79999999999999 8999999999999999999999976555 5677889999
Q ss_pred cccCCccccccccCCccccccc
Q 047790 623 SLTGNKDLCEKIMGSDCQILTF 644 (885)
Q Consensus 623 ~~~~N~~~c~~~~~~~c~~~~~ 644 (885)
++++|||.| +|...|+
T Consensus 503 ~l~~N~~~c------~c~~~~~ 518 (562)
T 3a79_B 503 WLHDNPWDC------TCPGIRY 518 (562)
T ss_dssp ECCSCCBCC------CHHHHHH
T ss_pred EecCCCcCC------CcchHHH
Confidence 999999999 8987765
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=430.28 Aligned_cols=493 Identities=21% Similarity=0.210 Sum_probs=394.5
Q ss_pred cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee
Q 047790 65 RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 144 (885)
.++.|||+++.+++-.+.++.++++|++|||++|.|++..|.+|++|++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 68899999999997666789999999999999999998888899999999999999999997777889999999999999
Q ss_pred ccCCCCCCCccccCCccCceEEccCCcCCc-cCCcccCCCCCCccccccccccCCCCCccccccccccc----EEEeecc
Q 047790 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLS----YLDVSNN 219 (885)
Q Consensus 145 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~----~L~Ls~N 219 (885)
+|++++..+..|+++++|++|+|++|++++ ..|..++.+++|++|+|++|+++ .++...+..+.+++ .++++.|
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC-EECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccc-ccccccccchhhhhhhhhhhhcccC
Confidence 999998777889999999999999999986 46788999999999999999998 55555577666544 6889999
Q ss_pred cCcccCCccccCCCcccceecccccccccc--------------------------cccccCccccCCCCCcEEEecCCc
Q 047790 220 LLSGNIPPEIGNLKKLSDLYLGIGPYQLSL--------------------------FVGRITPEIGNCSMLKYISLSNNK 273 (885)
Q Consensus 220 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~--------------------------~~~~~~~~l~~l~~L~~L~Ls~N~ 273 (885)
.++...+..+.. ..+..+++..|...... ........+..+..+...++..+.
T Consensus 212 ~l~~i~~~~~~~-~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTTTT-CEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCcccccc-hhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 998655444433 34445554333211000 001111223334444444444433
Q ss_pred ccc---cccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccC
Q 047790 274 LSG---PIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIP 350 (885)
Q Consensus 274 l~~---~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p 350 (885)
... ..+..+....+++.+++.++.+....+ +.....|+.|++++|.+.+..+..+. .++.++++.|.+....
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~~~~L~~L~l~~~~~~~~~~~~l~--~L~~l~l~~n~~~~~~- 365 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQFPTLKLK--SLKRLTFTSNKGGNAF- 365 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECGG--GGSCCCCSEEEEESCEESSCCCCBCT--TCCEEEEESCCSCCBC-
T ss_pred hcccccchhhhhhhhcccccccccccccccccc--cccchhhhhhhcccccccCcCcccch--hhhhcccccccCCCCc-
Confidence 221 233445667789999999998876544 55678899999999999866554332 6889999999887543
Q ss_pred ccccCccccceeecccccccC--CCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCC-CccCC
Q 047790 351 VSLWNSENLMEFNAASNLLEG--SLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIP-MEFGD 427 (885)
Q Consensus 351 ~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 427 (885)
....+++|+.+++++|.+.. ..+..+..+.+|+.|+++.|.+.. .+..+..+++|+.++++.|+.....+ ..|..
T Consensus 366 -~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~ 443 (635)
T 4g8a_A 366 -SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS 443 (635)
T ss_dssp -CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTT
T ss_pred -ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccc
Confidence 34578999999999998863 456667788899999999999975 56678899999999999998876654 57889
Q ss_pred CCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccc-cCCCCCCcccccccceeeeccccce
Q 047790 428 CISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLL-TGSIPPEFGDSLKVQGLYLGHNQLT 506 (885)
Q Consensus 428 l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~ 506 (885)
+++++.++++.|.++ +..|..+..++.|+.|++++|.+ .+..|..|..+++|+.|+|++|+++
T Consensus 444 l~~l~~l~ls~n~l~----------------~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~ 507 (635)
T 4g8a_A 444 LRNLIYLDISHTHTR----------------VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE 507 (635)
T ss_dssp CTTCCEEECTTSCCE----------------ECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccc----------------cccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccC
Confidence 999999999998884 46678889999999999999985 4457889999999999999999999
Q ss_pred eccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCC
Q 047790 507 GSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHI 586 (885)
Q Consensus 507 g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~i 586 (885)
+.+ |.+|.++++|+.|+|++|+|+ +..|..+.++++|++|||++|+|++.+
T Consensus 508 ~l~----------------~~~f~~l~~L~~L~Ls~N~l~-------------~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 558 (635)
T 4g8a_A 508 QLS----------------PTAFNSLSSLQVLNMSHNNFF-------------SLDTFPYKCLNSLQVLDYSLNHIMTSK 558 (635)
T ss_dssp EEC----------------TTTTTTCTTCCEEECTTSCCC-------------BCCCGGGTTCTTCCEEECTTSCCCBCC
T ss_pred CcC----------------hHHHcCCCCCCEEECCCCcCC-------------CCChhHHhCCCCCCEEECCCCcCCCCC
Confidence 765 788999999999999965554 455778999999999999999999999
Q ss_pred CccccCc-cccceeecccCcCCCCCC
Q 047790 587 PEKLCSL-PYLLYLNLADNRLEGEVP 611 (885)
Q Consensus 587 p~~l~~l-~~L~~L~l~~N~l~~~~p 611 (885)
|..+..+ ++|++|+|++|++.+...
T Consensus 559 ~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 559 KQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp SSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred HHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999988 689999999999988654
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=382.58 Aligned_cols=291 Identities=29% Similarity=0.513 Sum_probs=247.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcc--cCCccccC----CcEEEEEEecccccc--cccccccCCCCCCEE
Q 047790 22 DEPKQERRSLVHFKNSLQNPQVLSGWNKTTRHCH--WFGVKCRH----SRVVSLVIQTQSLKG--PVSPFLFNLSSLRIL 93 (885)
Q Consensus 22 ~~~~~~~~aLl~~k~~~~~~~~~~~w~~~~~~c~--w~gv~c~~----~~v~~l~l~~~~l~g--~~~~~l~~l~~L~~L 93 (885)
.|.++|++||++||+++.++..+++|..++|||. |.||+|+. .+|+.++++++++.| .+|+.+.++++|++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L 81 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCee
Confidence 5999999999999999988778999988889999 99999985 589999999999999 899999999999999
Q ss_pred ecCC-CcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcC
Q 047790 94 DLSK-NLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGL 172 (885)
Q Consensus 94 ~Ls~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 172 (885)
+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|+.+++|++|+|++|.+++.+|..++.+++|++|+|++|++
T Consensus 82 ~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 161 (313)
T 1ogq_A 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161 (313)
T ss_dssp EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCC
T ss_pred eCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcc
Confidence 9995 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCcccCCCC-CCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccc
Q 047790 173 NGTIPSRLGDLT-QLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFV 251 (885)
Q Consensus 173 ~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~ 251 (885)
++.+|..+..++ +|++|++++|++++.+|.. +..++ |++|++++|++++..|..+..+++|+.|+++.|.. .
T Consensus 162 ~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~-~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l-----~ 234 (313)
T 1ogq_A 162 SGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT-FANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL-----A 234 (313)
T ss_dssp EEECCGGGGCCCTTCCEEECCSSEEEEECCGG-GGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEE-----C
T ss_pred cCcCCHHHhhhhhcCcEEECcCCeeeccCChH-HhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCce-----e
Confidence 999999999998 9999999999999878776 77776 99999999999988777777777777777755542 1
Q ss_pred cccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccc
Q 047790 252 GRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNR 321 (885)
Q Consensus 252 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 321 (885)
+. ++.+..+++|++|++++|++++.+|..+..+++|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 235 ~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 235 FD-LGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CB-GGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred ee-cCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 22 223566666777777777776666666666666777777777666666654 556666666666665
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-43 Score=399.80 Aligned_cols=390 Identities=23% Similarity=0.263 Sum_probs=269.1
Q ss_pred CCCcccCC--ccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCC
Q 047790 51 TRHCHWFG--VKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSI 128 (885)
Q Consensus 51 ~~~c~w~g--v~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 128 (885)
...|.|.+ |.|+...+ + .+|. + .++|++|||++|.+++..|..|+++++|++|+|++|.+.+.+
T Consensus 5 ~~~c~~~~~~~~c~~~~l----------~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i 70 (455)
T 3v47_A 5 TSECSVIGYNAICINRGL----------H-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVI 70 (455)
T ss_dssp --CCEEETTEEECCSSCC----------S-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEE
T ss_pred cceeEEEccccCcCCCCc----------c-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceE
Confidence 34566665 56654332 2 3444 2 278999999999999988999999999999999999998666
Q ss_pred -CccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcc--cCCCCCCccccccccccCCCCCcccc
Q 047790 129 -PSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSR--LGDLTQLQDLDLSDNLLSGSLPVSLL 205 (885)
Q Consensus 129 -p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~ 205 (885)
|..|..+++|++|+|++|++++..|..|+++++|++|+|++|++++..|.. |.++++|++|+|++|++++..|...+
T Consensus 71 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 150 (455)
T 3v47_A 71 RNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFF 150 (455)
T ss_dssp CTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGG
T ss_pred CcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccccc
Confidence 567999999999999999999888999999999999999999999755544 99999999999999999966677778
Q ss_pred cccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccccccc----
Q 047790 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRE---- 281 (885)
Q Consensus 206 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~---- 281 (885)
.++++|++|++++|++++..|..+..+. ..+|+.|++++|.+.+..+..
T Consensus 151 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~---------------------------~~~L~~L~l~~n~l~~~~~~~~~~~ 203 (455)
T 3v47_A 151 LNMRRFHVLDLTFNKVKSICEEDLLNFQ---------------------------GKHFTLLRLSSITLQDMNEYWLGWE 203 (455)
T ss_dssp GGCTTCCEEECTTCCBSCCCTTTSGGGT---------------------------TCEEEEEECTTCBCTTCSTTCTTHH
T ss_pred CCCCcccEEeCCCCcccccChhhhhccc---------------------------cccccccccccCcccccchhhcccc
Confidence 9999999999999999987777665541 124566666666666544332
Q ss_pred ----ccCCCCCcEEEccCCCCcCccccccccc---CCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCcccc
Q 047790 282 ----LCNSGSLVEINLDGNMLSGTIEDVFDRC---TNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLW 354 (885)
Q Consensus 282 ----l~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 354 (885)
+..+++|++|++++|.+++..+..+... ++|+.|++++|.+.+... ..+.+....+..+.
T Consensus 204 ~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~-------------~~~~~~~~~~~~~~ 270 (455)
T 3v47_A 204 KCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF-------------GHTNFKDPDNFTFK 270 (455)
T ss_dssp HHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT-------------TCCSSCCCCTTTTG
T ss_pred ccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc-------------chhhhccCcccccc
Confidence 2245667777777777776666655444 667777777776553211 11222222222222
Q ss_pred Cc--cccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCccc
Q 047790 355 NS--ENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLN 432 (885)
Q Consensus 355 ~l--~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 432 (885)
.+ ++|+.|++++|.+.+..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|+++++.|..|..+++|+
T Consensus 271 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 350 (455)
T 3v47_A 271 GLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLE 350 (455)
T ss_dssp GGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCC
T ss_pred cccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCC
Confidence 22 4556666666666655565666666666666666666666666666666666666666666665566666666666
Q ss_pred EEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccc
Q 047790 433 TLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIP 510 (885)
Q Consensus 433 ~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 510 (885)
+|+|++|+++ +..|..+..+++|++|+|++|++++..+..|..+++|+.|++++|++++.+|
T Consensus 351 ~L~Ls~N~l~----------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 351 VLDLSYNHIR----------------ALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp EEECCSSCCC----------------EECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EEECCCCccc----------------ccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 6666666553 2345556666666666666666665444455666666666666666665553
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=394.84 Aligned_cols=409 Identities=25% Similarity=0.293 Sum_probs=166.7
Q ss_pred ccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccc-------------cEeeeeccCC
Q 047790 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRL-------------ETISLRSNSF 148 (885)
Q Consensus 82 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l 148 (885)
|.-...++|++|++++|.+ +.+|++|+++++|++|++++|+++|.+|..++.+++| ++|++++|.+
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l 83 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGL 83 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCC
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcc
Confidence 3334557777777777777 6777777777777777777777777777777777765 5555555555
Q ss_pred CCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCcc
Q 047790 149 TGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE 228 (885)
Q Consensus 149 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 228 (885)
++ +|.. .++|++|++++|++++ +|.. +++|++|++++|+++ .+|.. .++|++|++++|++++ +|
T Consensus 84 ~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~----~~~L~~L~L~~n~l~~-lp-- 147 (454)
T 1jl5_A 84 SS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDL----PPLLEYLGVSNNQLEK-LP-- 147 (454)
T ss_dssp SC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSC----CTTCCEEECCSSCCSS-CC--
T ss_pred cc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCC----CCCCCEEECcCCCCCC-Cc--
Confidence 42 2221 1345555555555553 3332 244555555555554 23321 1345555555555543 33
Q ss_pred ccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccc
Q 047790 229 IGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDR 308 (885)
Q Consensus 229 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 308 (885)
.++++++|++|++++|++++ +|..+ .+|++|++++|++++. | .+..
T Consensus 148 ----------------------------~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~-~~~~ 193 (454)
T 1jl5_A 148 ----------------------------ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-P-ELQN 193 (454)
T ss_dssp ----------------------------CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-C-CCTT
T ss_pred ----------------------------ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC-c-cccC
Confidence 24444455555555555553 33322 3555555555555543 2 2455
Q ss_pred cCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEc
Q 047790 309 CTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDL 388 (885)
Q Consensus 309 l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 388 (885)
+++|++|++++|++++ +|... ..|++|++++|+++ .+| .+..+++|++|++++|++.+. |.. .++|++|++
T Consensus 194 l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l 264 (454)
T 1jl5_A 194 LPFLTAIYADNNSLKK-LPDLP--LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTL-PDL---PPSLEALNV 264 (454)
T ss_dssp CTTCCEEECCSSCCSS-CCCCC--TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSC-CSC---CTTCCEEEC
T ss_pred CCCCCEEECCCCcCCc-CCCCc--CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcc-ccc---ccccCEEEC
Confidence 5555555555555553 22221 14555555555555 333 255555666666666655542 221 245666666
Q ss_pred cCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccC
Q 047790 389 SSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRL 468 (885)
Q Consensus 389 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l 468 (885)
++|++++ +|.. +++|+.|++++|++++. |.. .++|++|++++|++++. + .+
T Consensus 265 ~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i-----------------~----~~ 315 (454)
T 1jl5_A 265 RDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSL-----------------C----DL 315 (454)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE-----------------C----CC
T ss_pred CCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcc-----------------c----CC
Confidence 6666654 3332 25566666666666642 211 14566666666665421 1 11
Q ss_pred -CCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCC
Q 047790 469 -TNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDG 547 (885)
Q Consensus 469 -~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 547 (885)
++|+.|++++|++++ +|.. +++|+.|++++|++++ + |. .+++|+.|+|++|++++
T Consensus 316 ~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-l----------------p~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 316 PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-V----------------PE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-C----------------CC---CCTTCCEEECCSSCCSS
T ss_pred cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-c----------------cc---hhhhccEEECCCCCCCc
Confidence 345555555555553 3433 2445555555555541 2 22 24455555555555544
Q ss_pred cee-----eeecccccccccchhccCcccccccccccccCCC--CCCccccCccccceeecccCcCCCCCCC
Q 047790 548 IVG-----LYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDG--HIPEKLCSLPYLLYLNLADNRLEGEVPR 612 (885)
Q Consensus 548 ~~~-----l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~--~ip~~l~~l~~L~~L~l~~N~l~~~~p~ 612 (885)
+.. ..+..|.+.|.+|.. +++|++||+++|++++ .+|.+ ++.|.+.+|.+.+.+|.
T Consensus 372 l~~ip~~l~~L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 372 FPDIPESVEDLRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPES------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp CCCCCTTCCEEECCC---------------------------------------------------------
T ss_pred CCCChHHHHhhhhcccccccccc---cCcCCEEECCCCcCCccccchhh------HhheeCcCcccCCcccc
Confidence 211 122345566666653 4788888999998887 66654 55667788888776553
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=367.29 Aligned_cols=201 Identities=24% Similarity=0.340 Sum_probs=181.2
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.+|++.++||+|+||.||+|++. +++.||+|++.+.. ....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999875 58999999997542 234578999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC-
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE- 815 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~- 815 (885)
||++||+|.+++...+ .+++..++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999998654 4999999999999999999999 9999999999999999999999999999998875432
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
........||+.|+|||++.+..|+.++||||+||++|||++|+.||...
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~ 237 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 23344568999999999999999999999999999999999999999753
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=369.55 Aligned_cols=198 Identities=25% Similarity=0.326 Sum_probs=180.2
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|++.++||+|+||.||+|++. +|+.||+|++........+.+.+|++++++++||||+++++++.+++..|+||||+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 34899999999999999999875 58999999997665555677899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+||+|.+++... .+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||+|+.+.... ...
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~ 227 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR 227 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCB
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC-Ccc
Confidence 999999999753 4999999999999999999999 9999999999999999999999999999998875432 233
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....||+.|+|||++.+..|+.++||||+||++|||++|+.||..
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 272 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 272 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 456899999999999999999999999999999999999999964
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=387.37 Aligned_cols=396 Identities=18% Similarity=0.165 Sum_probs=239.4
Q ss_pred CEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccC-CcccCCCCCCccccccc
Q 047790 115 KMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTI-PSRLGDLTQLQDLDLSD 193 (885)
Q Consensus 115 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~ 193 (885)
+.++.+++.++ .+|. + .++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 34556666665 4454 2 255666666666666555666666666666666666665333 34555666666666666
Q ss_pred cccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCc
Q 047790 194 NLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNK 273 (885)
Q Consensus 194 N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 273 (885)
|++++..| ..++++++|++|++++|++++.+|.. ..+..+++|++|++++|+
T Consensus 89 n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~---------------------------~~~~~l~~L~~L~L~~n~ 140 (455)
T 3v47_A 89 NQFLQLET-GAFNGLANLEVLTLTQCNLDGAVLSG---------------------------NFFKPLTSLEMLVLRDNN 140 (455)
T ss_dssp CTTCEECT-TTTTTCTTCCEEECTTSCCBTHHHHS---------------------------STTTTCTTCCEEECCSSB
T ss_pred CccCccCh-hhccCcccCCEEeCCCCCCCccccCc---------------------------ccccCcccCCEEECCCCc
Confidence 66552222 23555555555555555554321110 114455666666667777
Q ss_pred cccccccc-ccCCCCCcEEEccCCCCcCccccccccc--CCcceeeccccccCCCCCcccCCCCceeEEeecCccccccC
Q 047790 274 LSGPIPRE-LCNSGSLVEINLDGNMLSGTIEDVFDRC--TNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIP 350 (885)
Q Consensus 274 l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p 350 (885)
+++..|.. +..+++|++|++++|.+++..+..+..+ .+|+.|++++|.+.+..+..+.. ...
T Consensus 141 l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~---------------~~~ 205 (455)
T 3v47_A 141 IKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW---------------EKC 205 (455)
T ss_dssp CCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH---------------HHH
T ss_pred cCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccc---------------ccc
Confidence 66665554 5666666666666666666666555544 44555555555555433322110 000
Q ss_pred ccccCccccceeecccccccCCCccccccc---ccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCC
Q 047790 351 VSLWNSENLMEFNAASNLLEGSLSWEISNA---VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGD 427 (885)
Q Consensus 351 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 427 (885)
..+..+++|++|++++|.+.+..|..+... ++|+.|++++|.+.+. .+..+.+.+..+..+..
T Consensus 206 ~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~--------------~~~~~~~~~~~~~~~~~ 271 (455)
T 3v47_A 206 GNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGS--------------SFGHTNFKDPDNFTFKG 271 (455)
T ss_dssp CCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSC--------------CTTCCSSCCCCTTTTGG
T ss_pred ccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccc--------------ccchhhhccCccccccc
Confidence 111223334444444444433333333322 4455555555544321 11122222222333333
Q ss_pred C--CcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccc
Q 047790 428 C--ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQL 505 (885)
Q Consensus 428 l--~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 505 (885)
+ ++|++|++++|+++ +..|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++
T Consensus 272 ~~~~~L~~L~l~~n~l~----------------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (455)
T 3v47_A 272 LEASGVKTCDLSKSKIF----------------ALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL 335 (455)
T ss_dssp GTTSCCCEEECCSSCCC----------------EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ccccCceEEEecCcccc----------------ccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCcc
Confidence 2 56777777777764 45677788888888888888888887888888888999999998888
Q ss_pred eeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCC
Q 047790 506 TGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGH 585 (885)
Q Consensus 506 ~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ 585 (885)
++.. |..|+.+++|+.|+|++|++ ++..|..++.+++|++|+|++|++++.
T Consensus 336 ~~~~----------------~~~~~~l~~L~~L~Ls~N~l-------------~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 336 GSID----------------SRMFENLDKLEVLDLSYNHI-------------RALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp CEEC----------------GGGGTTCTTCCEEECCSSCC-------------CEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcC----------------hhHhcCcccCCEEECCCCcc-------------cccChhhccccccccEEECCCCccccC
Confidence 7544 67788889999999985554 445678888899999999999999865
Q ss_pred CCccccCccccceeecccCcCCCCCCCCccc
Q 047790 586 IPEKLCSLPYLLYLNLADNRLEGEVPRSGIC 616 (885)
Q Consensus 586 ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~ 616 (885)
.+..+..+++|++|++++|++++.+|....+
T Consensus 387 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l 417 (455)
T 3v47_A 387 PDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 417 (455)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred CHhHhccCCcccEEEccCCCcccCCCcchHH
Confidence 5556788999999999999999988865433
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=386.07 Aligned_cols=391 Identities=26% Similarity=0.345 Sum_probs=258.8
Q ss_pred CcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccC-------------ceEEccCCcCCccC
Q 047790 110 NLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQL-------------KSLDFSGNGLNGTI 176 (885)
Q Consensus 110 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L-------------~~L~Ls~N~l~~~~ 176 (885)
..+.|++|++++|.+ +.+|++|+.+++|++|++++|.++|.+|.+++++++| ++|++++|++++ +
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 468999999999999 7999999999999999999999999999999999886 666666666663 3
Q ss_pred CcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCc
Q 047790 177 PSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITP 256 (885)
Q Consensus 177 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 256 (885)
|.. .++|++|++++|++++ +|.. .++|++|++++|++++ +|.
T Consensus 87 p~~---~~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~------------------------------l~~ 128 (454)
T 1jl5_A 87 PEL---PPHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA------------------------------LSD 128 (454)
T ss_dssp CSC---CTTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC------------------------------CCS
T ss_pred CCC---cCCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCc------------------------------ccC
Confidence 331 2456666666666663 5532 2556666666665542 111
Q ss_pred cccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-Cc
Q 047790 257 EIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PL 335 (885)
Q Consensus 257 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L 335 (885)
. .++|++|++++|++++ +| .++.+++|++|++++|++++.+ .. ..+|++|++++|++++ +|. +..+ .|
T Consensus 129 ~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp-~~---~~~L~~L~L~~n~l~~-l~~-~~~l~~L 197 (454)
T 1jl5_A 129 L---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLP-DL---PPSLEFIAAGNNQLEE-LPE-LQNLPFL 197 (454)
T ss_dssp C---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCC-CC---CTTCCEEECCSSCCSS-CCC-CTTCTTC
T ss_pred C---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccC-CC---cccccEEECcCCcCCc-Ccc-ccCCCCC
Confidence 1 1579999999999996 67 6999999999999999999754 33 3699999999999997 564 5555 79
Q ss_pred eeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccc
Q 047790 336 KVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSN 415 (885)
Q Consensus 336 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 415 (885)
++|++++|++++. |... ++|++|++++|.+. .+| .+..+++|++|++++|++++ +|.. +++|+.|++++|
T Consensus 198 ~~L~l~~N~l~~l-~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N 267 (454)
T 1jl5_A 198 TAIYADNNSLKKL-PDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDN 267 (454)
T ss_dssp CEEECCSSCCSSC-CCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSS
T ss_pred CEEECCCCcCCcC-CCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCC
Confidence 9999999999974 4332 58999999999998 556 48999999999999999986 4543 479999999999
Q ss_pred cccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCccccccc
Q 047790 416 FFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKV 495 (885)
Q Consensus 416 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 495 (885)
++++ +|.. .++|++|++++|++++.. .+| ++|+.|++++|++++ ++.. ..+|
T Consensus 268 ~l~~-l~~~---~~~L~~L~ls~N~l~~l~--------------~~~------~~L~~L~l~~N~l~~-i~~~---~~~L 319 (454)
T 1jl5_A 268 YLTD-LPEL---PQSLTFLDVSENIFSGLS--------------ELP------PNLYYLNASSNEIRS-LCDL---PPSL 319 (454)
T ss_dssp CCSC-CCCC---CTTCCEEECCSSCCSEES--------------CCC------TTCCEEECCSSCCSE-ECCC---CTTC
T ss_pred cccc-cCcc---cCcCCEEECcCCccCccc--------------CcC------CcCCEEECcCCcCCc-ccCC---cCcC
Confidence 9997 5554 378999999999987421 122 689999999999985 3321 1489
Q ss_pred ceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccccccc
Q 047790 496 QGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYL 575 (885)
Q Consensus 496 ~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L 575 (885)
+.|++++|++++ + |.. +++|+.|++++|+++ .+|. .+++|++|
T Consensus 320 ~~L~Ls~N~l~~-l----------------p~~---~~~L~~L~L~~N~l~--------------~lp~---~l~~L~~L 362 (454)
T 1jl5_A 320 EELNVSNNKLIE-L----------------PAL---PPRLERLIASFNHLA--------------EVPE---LPQNLKQL 362 (454)
T ss_dssp CEEECCSSCCSC-C----------------CCC---CTTCCEEECCSSCCS--------------CCCC---CCTTCCEE
T ss_pred CEEECCCCcccc-c----------------ccc---CCcCCEEECCCCccc--------------cccc---hhhhccEE
Confidence 999999999985 3 333 588999999977776 4565 47899999
Q ss_pred ccccccCCC--CCCccccCc-------------cccceeecccCcCCC--CCCCCccccccccccccCCcccc
Q 047790 576 DFSMNMLDG--HIPEKLCSL-------------PYLLYLNLADNRLEG--EVPRSGICQNLSIISLTGNKDLC 631 (885)
Q Consensus 576 ~Ls~N~l~~--~ip~~l~~l-------------~~L~~L~l~~N~l~~--~~p~~~~~~~~~~~~~~~N~~~c 631 (885)
++++|++++ .+|.++..+ ++|++|++++|++++ .+|. ++..+.+.+|...|
T Consensus 363 ~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~-----sl~~L~~~~~~~~~ 430 (454)
T 1jl5_A 363 HVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPE-----SVEDLRMNSERVVD 430 (454)
T ss_dssp ECCSSCCSSCCCCCTTCCEEECCC-------------------------------------------------
T ss_pred ECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchh-----hHhheeCcCcccCC
Confidence 999999998 789999888 899999999999998 5553 45566677766555
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-42 Score=369.54 Aligned_cols=201 Identities=23% Similarity=0.307 Sum_probs=172.6
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.+|++.++||+|+||.||+|++. +|+.||+|++.... ....+++.+|++++++++||||+++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57999999999999999999875 58999999997543 2234678999999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 738 YMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|++||+|.+++..+ ...+++..++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||+|+......
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV- 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence 99999999999754 344789999999999999999999 9999999999999999999999999999998764321
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......||+.|+|||++.+..|+.++||||+||++|||++|+.||...
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 228 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG 228 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 1223456999999999999999999999999999999999999999753
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=371.65 Aligned_cols=198 Identities=25% Similarity=0.326 Sum_probs=180.2
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|++.++||+|+||.||+|++. +|+.||+|++........+.+.+|+++++.++||||+++++++.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 35999999999999999999875 58999999998666555677899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+||+|.+++... .+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||+|+.+.... ...
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~ 304 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR 304 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-CCB
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC-ccc
Confidence 999999999753 4899999999999999999999 9999999999999999999999999999998875432 233
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....||+.|||||++.+..|+.++||||+||++|||++|+.||..
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 349 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 349 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 456799999999999999999999999999999999999999964
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=361.73 Aligned_cols=198 Identities=21% Similarity=0.251 Sum_probs=172.9
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|++.++||+|+||.||+|++. +|+.||+|+++..... .+|++++++++||||+++++++.+++..|+||||+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-----~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-----HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 46889999999999999999875 4899999999764322 46999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-cEEEeeccCcccccCCCCC-
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-EAKVSDFGLARLISDCESH- 817 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-~vkl~Dfg~a~~~~~~~~~- 817 (885)
+||+|.++++..+ .+++..+..++.|++.|++||| +++|+||||||+||+++.++ .+||+|||+|+.+......
T Consensus 133 ~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 133 EGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp TTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 9999999998654 4999999999999999999999 99999999999999999887 6999999999877543211
Q ss_pred ---cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 818 ---VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 818 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
......||+.|||||++.+..|+.++||||+||++|||++|+.||.....
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~ 261 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 261 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH
Confidence 12335799999999999999999999999999999999999999976543
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-41 Score=351.23 Aligned_cols=198 Identities=21% Similarity=0.378 Sum_probs=163.0
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+++|++.+.||+|+||.||+|++. +++.||+|++.+.. .....++.+|++++++++||||+++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 468999999999999999999875 58999999997543 23356799999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+ +|+|.+++..+. .+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||+|+......
T Consensus 92 mEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 9999 679999988654 5999999999999999999999 9999999999999999999999999999998765422
Q ss_pred CCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||..
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~ 214 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence 2234679999999999998876 5799999999999999999999965
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-42 Score=363.54 Aligned_cols=200 Identities=25% Similarity=0.299 Sum_probs=170.7
Q ss_pred eEEeecceecccCCceEEEEEeC----CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+|++.++||+|+||.||+|++. .++.||+|++++.. .....++.+|++++++++||||+++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46999999999999999999763 36789999997543 2233468899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||++||+|.+++.+.. .+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999998654 4999999999999999999999 999999999999999999999999999999865442
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. .......||+.|+|||++.+..|+.++||||+||++|||+||+.||.+.
T Consensus 180 ~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 229 (304)
T 3ubd_A 180 E-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence 2 2334568999999999999999999999999999999999999999753
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=349.57 Aligned_cols=195 Identities=27% Similarity=0.420 Sum_probs=169.4
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEe----CCeeEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSV----GEEKLL 734 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~----~~~~~l 734 (885)
.|+++++||+|+||.||+|.+. .++.||+|++.... ....+++.+|++++++++||||+++++++.. +...|+
T Consensus 27 ~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred eEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 4588999999999999999875 48899999987543 2234678999999999999999999999865 346799
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEc-CCCcEEEeeccCcccc
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLN-DYFEAKVSDFGLARLI 811 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~-~~~~vkl~Dfg~a~~~ 811 (885)
||||++||+|.+++.+.. .+++..+..++.|++.|++||| +++ |+||||||+||+++ .++.+||+|||+|+..
T Consensus 107 vmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 999999999999998654 5899999999999999999999 888 99999999999997 4789999999999764
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. .......||+.|||||++.+ .|+.++||||+||++|||+||+.||..
T Consensus 183 ~~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~ 231 (290)
T 3fpq_A 183 RA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp CT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CC---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 32 22345679999999999875 699999999999999999999999964
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=358.92 Aligned_cols=202 Identities=31% Similarity=0.514 Sum_probs=176.6
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+|.++++||+|+||.||+|++. ++..||+|+++.......+++.+|++++++++||||+++++++.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45889999999999999999864 477899999987665556789999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhc------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEE
Q 047790 735 VYEYMVNGSLDDWLRNR------------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKV 802 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~------------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl 802 (885)
||||+++|+|.++++.. ...+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 99999999999999753 245899999999999999999999 899999999999999999999999
Q ss_pred eeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 803 SDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 803 ~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+|||+|+........ ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~ 234 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 234 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999876543222 2233468999999999999999999999999999999999 89999753
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=357.84 Aligned_cols=201 Identities=33% Similarity=0.545 Sum_probs=170.8
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.++.+.++||+|+||.||+|+++ +++.||+|+++.......++|.+|++++++++||||+++++++.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45788899999999999999864 477899999987665556789999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcE
Q 047790 735 VYEYMVNGSLDDWLRNRA--------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA 800 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~v 800 (885)
||||+++|+|.++++... ..+++..+..++.|++.|++||| +++|+||||||+||++++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999997532 34899999999999999999999 8999999999999999999999
Q ss_pred EEeeccCcccccCCC-CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 801 KVSDFGLARLISDCE-SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
||+|||+|+...... ........+|+.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~ 263 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 263 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC
Confidence 999999998764432 223344678999999999999999999999999999999999 8999964
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=367.95 Aligned_cols=358 Identities=21% Similarity=0.223 Sum_probs=194.8
Q ss_pred cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee
Q 047790 65 RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR 144 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 144 (885)
+++.++++++.+++. | .+..+++|++|+|++|.+++. | ++.+++|++|+|++|++++. | ++.+++|++|+++
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECC
Confidence 444555555555442 2 445555555555555555442 2 45555555555555555532 2 4555555555555
Q ss_pred ccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCccc
Q 047790 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGN 224 (885)
Q Consensus 145 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~ 224 (885)
+|++++ +| ++.+++|++|++++|++++. + ++++++|++|++++|+..+.++ +..+++|++|++++|++++
T Consensus 115 ~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~- 184 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKITE- 184 (457)
T ss_dssp SSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCCC-
T ss_pred CCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccc---cccCCcCCEEECCCCccce-
Confidence 555553 22 45555555555555555532 1 4455555555555553333332 3445555555555555553
Q ss_pred CCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccc
Q 047790 225 IPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIED 304 (885)
Q Consensus 225 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 304 (885)
+| +..+++|+.|+++.|... .+ .++.+++|++|++++|++++ +| +..+++|+.|++++|++++.++
T Consensus 185 l~--l~~l~~L~~L~l~~N~l~------~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~- 250 (457)
T 3bz5_A 185 LD--VSQNKLLNRLNCDTNNIT------KL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV- 250 (457)
T ss_dssp CC--CTTCTTCCEEECCSSCCS------CC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC-
T ss_pred ec--cccCCCCCEEECcCCcCC------ee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH-
Confidence 22 444444455544433321 11 13444445555555555443 23 4444444555555554444332
Q ss_pred cccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCccccccccccc
Q 047790 305 VFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE 384 (885)
Q Consensus 305 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 384 (885)
..+++|+.|++++|+ |+.|++++|.+.+.+| +..+++|+.|++++|...+.+|. ...+|+
T Consensus 251 --~~l~~L~~L~l~~n~-------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~ 310 (457)
T 3bz5_A 251 --STLSKLTTLHCIQTD-------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGIT 310 (457)
T ss_dssp --TTCTTCCEEECTTCC-------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCS
T ss_pred --HHCCCCCEEeccCCC-------------CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcce
Confidence 233444444444432 3445566666555554 34556666666666665555443 223344
Q ss_pred EEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchh
Q 047790 385 KLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGS 464 (885)
Q Consensus 385 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~ 464 (885)
.|++++| ++|+.|++++|+|++. + +.++++|+.|++++|+|++
T Consensus 311 ~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------------------- 353 (457)
T 3bz5_A 311 ELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------------------- 353 (457)
T ss_dssp CCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB---------------------
T ss_pred Eechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC---------------------
Confidence 4444443 6889999999999884 3 8889999999999988852
Q ss_pred cccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCC
Q 047790 465 LSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGN 519 (885)
Q Consensus 465 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n 519 (885)
++.|+.|++++|.++|. +.+..|..+++++|+++|.||..+....++
T Consensus 354 ---l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~~~~~~ 400 (457)
T 3bz5_A 354 ---FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLLDQFGN 400 (457)
T ss_dssp ---CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCBCTTSC
T ss_pred ---ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHhcccCc
Confidence 24566677888888765 456677788888888888887665544333
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=349.97 Aligned_cols=198 Identities=28% Similarity=0.469 Sum_probs=168.0
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+++.++||+|+||.||+|++.+ .||+|+++... ....+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 457789999999999999998754 58999986433 2334679999999999999999999998864 568999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC-CC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-SH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~-~~ 817 (885)
+++|+|.+++......+++..+..++.|++.|++||| +++|+||||||+||++++++.+||+|||+|+...... ..
T Consensus 113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999999877677999999999999999999999 8999999999999999999999999999998764322 22
Q ss_pred cccCCCCCCccCCcccccC---CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQA---GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......||+.|||||++.+ ..|+.++|||||||++|||+||+.||..
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~ 239 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH 239 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCC
Confidence 3345679999999999864 3589999999999999999999999975
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-40 Score=349.64 Aligned_cols=202 Identities=26% Similarity=0.443 Sum_probs=175.6
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
..+++.++||+|+||.||+|++. +++.||+|+++... ....++|.+|++++++++||||+++++++.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34778899999999999999863 46789999997543 334578999999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC
Q 047790 734 LVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~ 798 (885)
+||||+++|+|.+++..+. ..+++..+..++.|++.|++||| +++|+||||||+||++++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC
Confidence 9999999999999996432 34899999999999999999999 89999999999999999999
Q ss_pred cEEEeeccCcccccCCC-CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 799 EAKVSDFGLARLISDCE-SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 799 ~vkl~Dfg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.+||+|||+|+.....+ ........+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+.
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~ 251 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 251 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC
Confidence 99999999998764432 223344578999999999999999999999999999999998 89999753
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-39 Score=363.54 Aligned_cols=218 Identities=20% Similarity=0.242 Sum_probs=147.8
Q ss_pred ccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCcc
Q 047790 76 LKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSE 155 (885)
Q Consensus 76 l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 155 (885)
..+..+..++++++|++|||++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|++++|++++. |
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred cCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--
Confidence 3344455677778888888888887764 3 677788888888888888753 3 77777888888888887753 3
Q ss_pred ccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcc
Q 047790 156 LGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKL 235 (885)
Q Consensus 156 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 235 (885)
++.+++|++|++++|++++ +| ++.+++|++|++++|++++ ++ ++.+++|++|++++|+..+.+
T Consensus 102 ~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~---l~~l~~L~~L~l~~n~~~~~~---------- 164 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID---VSHNTQLTELDCHLNKKITKL---------- 164 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC---CTTCTTCCEEECTTCSCCCCC----------
T ss_pred cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec---cccCCcCCEEECCCCCccccc----------
Confidence 7777778888888887775 33 7777777777777777773 43 566777777777777543222
Q ss_pred cceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCccee
Q 047790 236 SDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSEL 315 (885)
Q Consensus 236 ~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 315 (885)
.+..+++|++|++++|++++ +| +..+++|+.|++++|++++. .+..+++|++|
T Consensus 165 ---------------------~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L 217 (457)
T 3bz5_A 165 ---------------------DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFL 217 (457)
T ss_dssp ---------------------CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEE
T ss_pred ---------------------ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEE
Confidence 13455677777777777775 33 66677777777777777765 25666777777
Q ss_pred eccccccCCCCCcccCCC-CceeEEeecCccccc
Q 047790 316 VLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGV 348 (885)
Q Consensus 316 ~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~ 348 (885)
++++|++++ +| +..+ .|+.|++++|++++.
T Consensus 218 ~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 218 DCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp ECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC
T ss_pred ECcCCcccc-cC--ccccCCCCEEEeeCCcCCCc
Confidence 777777765 33 3333 456666666665554
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=362.18 Aligned_cols=190 Identities=28% Similarity=0.395 Sum_probs=100.2
Q ss_pred CCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEE
Q 047790 87 LSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLD 166 (885)
Q Consensus 87 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 166 (885)
+++++.|+++++.+.. +| .+..+++|++|+|++|.+++..| ++.+++|++|++++|.+++..| ++++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 4455556666555542 22 25555555555555555553322 5555555555555555553322 55555555555
Q ss_pred ccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccc
Q 047790 167 FSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQ 246 (885)
Q Consensus 167 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~ 246 (885)
+++|++++..+ +.++++|++|++++|.++ .++. +..+++|++|+++ |.+.
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~l~-~~~~------------------------ 168 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTIS-DISA--LSGLTSLQQLSFG-NQVT------------------------ 168 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEEC-CCGG--GTTCTTCSEEEEE-ESCC------------------------
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccC-CChh--hccCCcccEeecC-Cccc------------------------
Confidence 55555553321 455555555555555554 2331 4444444444443 2211
Q ss_pred ccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccC
Q 047790 247 LSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323 (885)
Q Consensus 247 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 323 (885)
.++ .+.++++|++|++++|++++. ..+..+++|++|++++|.+++..+ +..+++|++|++++|+++
T Consensus 169 ------~~~-~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 234 (466)
T 1o6v_A 169 ------DLK-PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 234 (466)
T ss_dssp ------CCG-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred ------Cch-hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcc
Confidence 111 255667777777777777643 235666666666666666665554 455566666666665554
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=354.35 Aligned_cols=343 Identities=30% Similarity=0.409 Sum_probs=245.5
Q ss_pred CcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeee
Q 047790 64 SRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISL 143 (885)
Q Consensus 64 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 143 (885)
.+++.+++.+++++. +| .+..+++|++|||++|.+++..+ ++++++|++|++++|++++..| ++.+++|++|++
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 368888998888764 44 47889999999999999987554 9999999999999999996655 999999999999
Q ss_pred eccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcc
Q 047790 144 RSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSG 223 (885)
Q Consensus 144 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 223 (885)
++|.+++..+ +..+++|++|++++|++++ ++ .+..+++|++|+++ |.+. .++. +.++++|++|++++|++++
T Consensus 120 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~-~~~~--~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 120 FNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVT-DLKP--LANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCC-CCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-Cccc-Cchh--hccCCCCCEEECcCCcCCC
Confidence 9999996533 8999999999999999985 34 48999999999997 5665 3433 8899999999999998863
Q ss_pred cCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCccc
Q 047790 224 NIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE 303 (885)
Q Consensus 224 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 303 (885)
. +.+..+++|++|++++|++++..| +..+++|++|++++|.+++.
T Consensus 192 ~-------------------------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-- 236 (466)
T 1o6v_A 192 I-------------------------------SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-- 236 (466)
T ss_dssp C-------------------------------GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--
T ss_pred C-------------------------------hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--
Confidence 1 124567889999999999997766 77899999999999999976
Q ss_pred ccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCccccccccc
Q 047790 304 DVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVA 382 (885)
Q Consensus 304 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 382 (885)
..+..+++|++|++++|++++..| +..+ .|+.|++++|++++..+ +..++ +
T Consensus 237 ~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~------------------------~ 288 (466)
T 1o6v_A 237 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLT------------------------A 288 (466)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCT------------------------T
T ss_pred hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCC------------------------c
Confidence 357888999999999998876544 3333 46666666666655433 44444 4
Q ss_pred ccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCc
Q 047790 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP 462 (885)
Q Consensus 383 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p 462 (885)
|++|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|++|++++|++++ +
T Consensus 289 L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-----------------~- 346 (466)
T 1o6v_A 289 LTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD-----------------V- 346 (466)
T ss_dssp CSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC-----------------C-
T ss_pred cCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC-----------------c-
Confidence 5555555555544322 4445555555555555554433 4455555555555555431 1
Q ss_pred hhcccCCCCCEEeccCccccCCCCCCcccccccceeeecccccee
Q 047790 463 GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTG 507 (885)
Q Consensus 463 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 507 (885)
..+..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 347 ~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 347 SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 234455555555555555554443 4555555555555555554
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=335.84 Aligned_cols=197 Identities=24% Similarity=0.358 Sum_probs=159.8
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCC--------
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGE-------- 730 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-------- 730 (885)
.+|++.+.||+|+||.||+|++. +++.||+|+++.... ...+++.+|++++++++||||+++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35899999999999999999875 589999999875432 23467889999999999999999999886543
Q ss_pred ----eeEEEEecccCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEee
Q 047790 731 ----EKLLVYEYMVNGSLDDWLRNRAA--SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSD 804 (885)
Q Consensus 731 ----~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~D 804 (885)
+.|+||||+++|+|.+++..+.. ..++..+..++.|+++|++||| ++||+||||||+||+++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999986432 2456678899999999999999 89999999999999999999999999
Q ss_pred ccCcccccCCCCC-----------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 805 FGLARLISDCESH-----------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 805 fg~a~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
||+|+........ ......||+.|||||++.+..|+.++||||+||++|||++ ||.
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~ 228 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFS 228 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCS
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCC
Confidence 9999876542211 1123469999999999999999999999999999999996 775
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=340.12 Aligned_cols=199 Identities=27% Similarity=0.393 Sum_probs=163.3
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC----eeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE----EKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~ 736 (885)
.+|.++++||+|+||.||+|++ +|+.||+|+++..... ....+.|+..+.+++||||+++++++.+++ ..|+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4688999999999999999987 5789999999754321 233456777778899999999999987653 579999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcc-----CCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG-----FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~-----~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
||+++|+|.++++.. .+++..+..++.|++.|++|||.. .+.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999999864 489999999999999999999931 1239999999999999999999999999999876
Q ss_pred cCCCCC---cccCCCCCCccCCcccccCC------CCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 812 SDCESH---VSTDTADTIGYVPSEYGQAG------RANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 812 ~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
...... ......||+.|+|||++.+. .++.++|||||||++|||+||..||.
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~ 219 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 219 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCC
Confidence 543322 22335699999999998765 36779999999999999999988765
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=357.08 Aligned_cols=329 Identities=19% Similarity=0.156 Sum_probs=277.6
Q ss_pred CCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEe
Q 047790 262 SMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDL 340 (885)
Q Consensus 262 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L 340 (885)
++++.|+|++|++++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+..+..+ .|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 468889999999988888888899999999999999998888889999999999999999987777777776 7999999
Q ss_pred ecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCc
Q 047790 341 QYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI 420 (885)
Q Consensus 341 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 420 (885)
++|++++..|..|..+++|++|++++|.+.+..+..|.++++|++|+|++|++++..+..+..+++|+.|+|++|.++++
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 99999988888999999999999999999988888899999999999999999988778899999999999999999988
Q ss_pred CCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeee
Q 047790 421 IPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYL 500 (885)
Q Consensus 421 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 500 (885)
.+..|..+++|+.|++++|.+. +.+|.......+|+.|+|++|++++..+..|..+++|+.|+|
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~----------------~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 255 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYL----------------DTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNL 255 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTC----------------CEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEEC
T ss_pred ChhhcccCcccceeeCCCCccc----------------cccCcccccCccccEEECcCCcccccCHHHhcCccccCeeEC
Confidence 8889999999999999988763 345555555668999999999998544467888999999999
Q ss_pred ccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccc
Q 047790 501 GHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMN 580 (885)
Q Consensus 501 s~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N 580 (885)
++|++++.. +..|..+++|+.|+|++|++ ++..|..+.++++|++|+|++|
T Consensus 256 s~n~l~~~~----------------~~~~~~l~~L~~L~L~~n~l-------------~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 256 SYNPISTIE----------------GSMLHELLRLQEIQLVGGQL-------------AVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp CSSCCCEEC----------------TTSCTTCTTCCEEECCSSCC-------------SEECTTTBTTCTTCCEEECCSS
T ss_pred CCCcCCccC----------------hhhccccccCCEEECCCCcc-------------ceECHHHhcCcccCCEEECCCC
Confidence 999988544 56788899999999995554 4456788899999999999999
Q ss_pred cCCCCCCccccCccccceeecccCcCCCCCCCCccccccccccccCCcccccccc
Q 047790 581 MLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIM 635 (885)
Q Consensus 581 ~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~ 635 (885)
++++..+..+..+++|++|++++|++.+..+..+.........+.++...|..|.
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 9997666678889999999999999988766554444455567788888887553
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=341.67 Aligned_cols=202 Identities=27% Similarity=0.406 Sum_probs=173.7
Q ss_pred eEEeecceecccCCceEEEEEeCC------CCeEEEEEecccccc-cHHHHHHHHHHhcccCC-CCccceeeeeEeC-Ce
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATGQ-CDREFAAEMETLDMVKH-QNLVQLLGYCSVG-EE 731 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~-~~ 731 (885)
.+|+++++||+|+||.||+|++.. ++.||+|.+...... ..+.+.+|++++.++.| |||+++++++..+ +.
T Consensus 64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~ 143 (353)
T 4ase_A 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 143 (353)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCE
Confidence 469999999999999999998643 457999999765432 34678999999999976 8999999998654 56
Q ss_pred eEEEEecccCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC
Q 047790 732 KLLVYEYMVNGSLDDWLRNR---------------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND 796 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~---------------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~ 796 (885)
.++|||||++|+|.++++.. ...+++..+..++.|++.|++||| +++|+||||||+||++++
T Consensus 144 ~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSE 220 (353)
T ss_dssp CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceeeCC
Confidence 89999999999999999752 234789999999999999999999 899999999999999999
Q ss_pred CCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 797 YFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 797 ~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
++.+||+|||+|+.+...... ......+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+.
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999876543322 2334568999999999999999999999999999999998 99999754
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-38 Score=345.57 Aligned_cols=202 Identities=23% Similarity=0.320 Sum_probs=172.8
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEe------C
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSV------G 729 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~ 729 (885)
+..+|++.++||+|+||.||+|++. +|+.||+|++++... ...+++.+|+++++.++||||+++++++.. .
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 3457999999999999999999875 599999999975432 234578899999999999999999998754 3
Q ss_pred CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
+..|+||||++ |+|.+++... +.+++..++.++.|++.|++||| ++||+||||||+||+++.++.+|++|||+|+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~ 206 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred CEEEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceee
Confidence 57899999995 6899999754 45999999999999999999999 9999999999999999999999999999998
Q ss_pred cccCCC---CCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 810 LISDCE---SHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 810 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+.... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.
T Consensus 207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~ 266 (398)
T 4b99_A 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266 (398)
T ss_dssp CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC
Confidence 764321 2233456899999999998875 5699999999999999999999999754
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=355.42 Aligned_cols=200 Identities=21% Similarity=0.290 Sum_probs=174.0
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHH---HHHHhcccCCCCccceeeeeEeCCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAA---EMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~---E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
...+|++.++||+|+||.||+|++. +|+.||+|++.+.. ........+ ++++++.++||||++++++|.+++.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 4567999999999999999999876 48999999997542 122333334 4566777889999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.|+||||++||+|.+++...+ .+++..++.++.||+.|++||| ++||+||||||+||+++.+|++||+|||+|+.+
T Consensus 267 lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeec
Confidence 999999999999999998654 4999999999999999999999 999999999999999999999999999999877
Q ss_pred cCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... ....+||+.|+|||++.+ ..|+.++|+||+||++|||++|+.||...
T Consensus 343 ~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~ 394 (689)
T 3v5w_A 343 SKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394 (689)
T ss_dssp SSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred CCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 5432 344689999999999964 67999999999999999999999999653
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=339.94 Aligned_cols=351 Identities=18% Similarity=0.181 Sum_probs=200.3
Q ss_pred CCCCCCCCCCCcc-cCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccC
Q 047790 43 VLSGWNKTTRHCH-WFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGE 121 (885)
Q Consensus 43 ~~~~w~~~~~~c~-w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 121 (885)
.+++|..+.+||. |.+..|....+ .+............-..++++++|++++|.++...+..+..+++|++|+|++
T Consensus 2 ~~~~~~~~~~C~~~~~~~~c~~~~~---~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~ 78 (390)
T 3o6n_A 2 NVKPRQPEYKCIDSNLQYDCVFYDV---HIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLND 78 (390)
T ss_dssp -----CCEECBCC------EEEESC---EECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTT
T ss_pred CcCCCCCccceehhhhhhccceeee---eeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCC
Confidence 3678988888875 55555532211 1122221111222223456777777777776544444466677777777777
Q ss_pred CcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCC
Q 047790 122 NQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLP 201 (885)
Q Consensus 122 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 201 (885)
|++++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+|++|+++...+..|.++++|++|++++|+++ .++
T Consensus 79 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~-~~~ 157 (390)
T 3o6n_A 79 LQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIE 157 (390)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-BCC
T ss_pred CcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccC-ccC
Confidence 7776555556666777777777777766666666666666666666666666443344566666666666666665 444
Q ss_pred cccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccccccc
Q 047790 202 VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRE 281 (885)
Q Consensus 202 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 281 (885)
...+..+++|++|++++|++++. .+..+++|+.|++++|.+++.
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~~~--------------------------------~~~~l~~L~~L~l~~n~l~~~---- 201 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLTHV--------------------------------DLSLIPSLFHANVSYNLLSTL---- 201 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCSBC--------------------------------CGGGCTTCSEEECCSSCCSEE----
T ss_pred hhhccCCCCCCEEECCCCcCCcc--------------------------------ccccccccceeeccccccccc----
Confidence 44456666666666666655421 012234455555555555421
Q ss_pred ccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccce
Q 047790 282 LCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLME 361 (885)
Q Consensus 282 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 361 (885)
....+|++|++++|.++..+... .+ .|+.|++++|+++
T Consensus 202 -~~~~~L~~L~l~~n~l~~~~~~~---~~-----------------------~L~~L~l~~n~l~--------------- 239 (390)
T 3o6n_A 202 -AIPIAVEELDASHNSINVVRGPV---NV-----------------------ELTILKLQHNNLT--------------- 239 (390)
T ss_dssp -ECCSSCSEEECCSSCCCEEECCC---CS-----------------------SCCEEECCSSCCC---------------
T ss_pred -CCCCcceEEECCCCeeeeccccc---cc-----------------------cccEEECCCCCCc---------------
Confidence 11223344444444333221110 11 2333333333333
Q ss_pred eecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCccc
Q 047790 362 FNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL 441 (885)
Q Consensus 362 L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 441 (885)
+. ..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++ +|..+..+++|++|++++|++
T Consensus 240 ---------~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l 307 (390)
T 3o6n_A 240 ---------DT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL 307 (390)
T ss_dssp ---------CC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCC
T ss_pred ---------cc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcc
Confidence 21 235566677777777777777777777777777777777777775 455666777788888877777
Q ss_pred CcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeecccccee
Q 047790 442 NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTG 507 (885)
Q Consensus 442 ~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 507 (885)
+ .+|..+..+++|+.|++++|++++. | +..+++|+.|++++|++++
T Consensus 308 ~-----------------~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 308 L-----------------HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp C-----------------CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred e-----------------ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 5 5566677777888888888887743 3 5566777777777777764
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=337.64 Aligned_cols=197 Identities=24% Similarity=0.342 Sum_probs=169.7
Q ss_pred eEEeecceecccCCceEEEEEeC----CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 735 (885)
.+|++.++||+|+||.||+|+++ .++.||+|++.... ...++.+|+++++.+ .||||+++++++.++++.|+|
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv 98 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA 98 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence 46999999999999999999753 46789999986543 356788999999988 599999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC-CcEEEeeccCcccccCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY-FEAKVSDFGLARLISDC 814 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~-~~vkl~Dfg~a~~~~~~ 814 (885)
|||++|++|.+++. .+++..++.++.|++.|++||| ++||+||||||+||+++.+ +.+||+|||+|+...+.
T Consensus 99 mE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~ 171 (361)
T 4f9c_A 99 MPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT 171 (361)
T ss_dssp EECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred EeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence 99999999999984 3899999999999999999999 9999999999999999866 79999999999765432
Q ss_pred CC---------------------------CcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 815 ES---------------------------HVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 815 ~~---------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.. .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 11 112234699999999998876 58999999999999999999999996543
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=349.01 Aligned_cols=319 Identities=18% Similarity=0.225 Sum_probs=214.6
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
+.++.+++.++ .+|..+. +++++|+|++|++++..|..|..+++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 45777777775 4555443 46777777777777666677777777777777777777666777777777777777777
Q ss_pred cCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccccc
Q 047790 171 GLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLF 250 (885)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 250 (885)
++++..+..|.++++|++|+|++|+++ .++...|..+++|++|++++|++++..|.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~----------------------- 146 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVGDNDLVYISHR----------------------- 146 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEEECCTTCCEECTT-----------------------
T ss_pred cCCccCcccccCCCCCCEEECCCCccc-cCChhHccccccCCEEECCCCccceeChh-----------------------
Confidence 777555556677777777777777776 34334466777777777777766543333
Q ss_pred ccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCccc
Q 047790 251 VGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYI 330 (885)
Q Consensus 251 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 330 (885)
.+..+++|++|++++|++++..+..+..+++|+.|+|++|.+++..+..|..+++|++|++++|...+.+|...
T Consensus 147 ------~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~ 220 (477)
T 2id5_A 147 ------AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNC 220 (477)
T ss_dssp ------SSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTT
T ss_pred ------hccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCccc
Confidence 34455667777777777776666667777777777777777777777777777777777777776665555433
Q ss_pred CC-CCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccc
Q 047790 331 SE-LPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQI 409 (885)
Q Consensus 331 ~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 409 (885)
.. .+|+.|++++|++++..+..+..+++|+.|++++|.+.+..+..|..+++|++|+|++|++++..|..|..+++|+.
T Consensus 221 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 300 (477)
T 2id5_A 221 LYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV 300 (477)
T ss_dssp TTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCE
T ss_pred ccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCE
Confidence 32 26777777777777555455666666666666666666666666666666666666666666666666666666666
Q ss_pred eecccccccCcCCCccCCCCcccEEEcCCcccC
Q 047790 410 LKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN 442 (885)
Q Consensus 410 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 442 (885)
|+|++|+|+++.+..|..+++|++|+|++|.+.
T Consensus 301 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 301 LNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp EECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred EECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 666666666655555666666666666666654
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-36 Score=353.49 Aligned_cols=347 Identities=17% Similarity=0.178 Sum_probs=212.7
Q ss_pred CCCCCCCCCCCCcc----cCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEE
Q 047790 42 QVLSGWNKTTRHCH----WFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKML 117 (885)
Q Consensus 42 ~~~~~w~~~~~~c~----w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 117 (885)
..+++|..+.+||. |.++.|+. + +............-..+++++.|++++|.+....+..++.+++|++|
T Consensus 7 ~~l~~~~~~~~C~~~~~~~~c~~~~~-~-----i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L 80 (597)
T 3oja_B 7 YNVKPRQPEYKCIDSNLQYDCVFYDV-H-----IDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELL 80 (597)
T ss_dssp ----CCCSEECCCCC--CCSEEECSC-E-----ECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEE
T ss_pred ccccCCCCCCcCcccCcCceeEecCc-e-----ecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEE
Confidence 35788988888874 55554431 1 11111111111122346788888888888876666667888888888
Q ss_pred eccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccC
Q 047790 118 SVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLS 197 (885)
Q Consensus 118 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 197 (885)
+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+|++|.|++..+..|+++++|++|+|++|.++
T Consensus 81 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 160 (597)
T 3oja_B 81 NLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE 160 (597)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCC
Confidence 88888888777778888888888888888888777777888888888888888888665566788888888888888887
Q ss_pred CCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccc
Q 047790 198 GSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGP 277 (885)
Q Consensus 198 ~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 277 (885)
.++...+.++++|++|++++|.+++.. +..+++|+.|++++|.+++
T Consensus 161 -~~~~~~~~~l~~L~~L~L~~N~l~~~~--------------------------------~~~l~~L~~L~l~~n~l~~- 206 (597)
T 3oja_B 161 -RIEDDTFQATTSLQNLQLSSNRLTHVD--------------------------------LSLIPSLFHANVSYNLLST- 206 (597)
T ss_dssp -BCCTTTTTTCTTCCEEECTTSCCSBCC--------------------------------GGGCTTCSEEECCSSCCSE-
T ss_pred -CCChhhhhcCCcCcEEECcCCCCCCcC--------------------------------hhhhhhhhhhhcccCcccc-
Confidence 444455778888888888888776421 1234556666666666653
Q ss_pred ccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCc
Q 047790 278 IPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNS 356 (885)
Q Consensus 278 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l 356 (885)
+....+|+.|++++|.++..++..+ ++|+.|+|++|.+++. ..+..+ .|+.|+|++|.+++..|..|..+
T Consensus 207 ----l~~~~~L~~L~ls~n~l~~~~~~~~---~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 277 (597)
T 3oja_B 207 ----LAIPIAVEELDASHNSINVVRGPVN---VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKM 277 (597)
T ss_dssp ----EECCTTCSEEECCSSCCCEEECSCC---SCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTC
T ss_pred ----ccCCchhheeeccCCcccccccccC---CCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCc
Confidence 2234456666666666665444322 4566666666665542 222222 45555555555555555555555
Q ss_pred cccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEc
Q 047790 357 ENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDL 436 (885)
Q Consensus 357 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 436 (885)
++|+.|++++|.+.+. |..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.|++. | +..+++|+.|++
T Consensus 278 ~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l 352 (597)
T 3oja_B 278 QRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTL 352 (597)
T ss_dssp SSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEEC
T ss_pred cCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEe
Confidence 5555555555555442 333444555555555555555 3444455555555555555555543 1 344455555555
Q ss_pred CCcccC
Q 047790 437 GSNNLN 442 (885)
Q Consensus 437 s~N~l~ 442 (885)
++|.+.
T Consensus 353 ~~N~~~ 358 (597)
T 3oja_B 353 SHNDWD 358 (597)
T ss_dssp CSSCEE
T ss_pred eCCCCC
Confidence 555543
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=352.83 Aligned_cols=201 Identities=21% Similarity=0.354 Sum_probs=181.2
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|+++ +|+.||+|++........+.+.+|+++++.++||||+++++++.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 357999999999999999999875 5899999999776555567789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC--CCcEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND--YFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~--~~~vkl~Dfg~a~~~~~~~~ 816 (885)
++||+|.+++..+...+++..+..++.|++.|++||| +++|+||||||+||+++. .+.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 9999999999766667999999999999999999999 999999999999999985 4789999999998876432
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.
T Consensus 312 -~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~ 359 (573)
T 3uto_A 312 -SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE 359 (573)
T ss_dssp -EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred -ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 223457999999999999999999999999999999999999999753
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-36 Score=324.12 Aligned_cols=259 Identities=27% Similarity=0.398 Sum_probs=230.8
Q ss_pred CceeEEeecCcccc--ccCccccCccccceeeccc-ccccCCCcccccccccccEEEccCCcccccCcccccccccccce
Q 047790 334 PLKVFDLQYNNFTG--VIPVSLWNSENLMEFNAAS-NLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQIL 410 (885)
Q Consensus 334 ~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 410 (885)
.++.|+|++|++++ .+|..+.++++|++|++++ |.+.+.+|..|.++++|++|+|++|++++.+|..|..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 56777888888887 7788888888888888884 88888888889999999999999999998899999999999999
Q ss_pred ecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCC-CCCEEeccCccccCCCCCCc
Q 047790 411 KLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLT-NLTTLNLFGNLLTGSIPPEF 489 (885)
Q Consensus 411 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~ 489 (885)
+|++|.+++.+|..|..+++|++|++++|+++ +.+|..+..++ +|+.|++++|++++.+|..+
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~----------------~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~ 194 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRIS----------------GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTF 194 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCE----------------EECCGGGGCCCTTCCEEECCSSEEEEECCGGG
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCccc----------------CcCCHHHhhhhhcCcEEECcCCeeeccCChHH
Confidence 99999999999999999999999999988874 56788898888 99999999999999999999
Q ss_pred ccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCc
Q 047790 490 GDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNL 569 (885)
Q Consensus 490 ~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l 569 (885)
..+. |+.|++++|++++.+ |..|..+++|+.|+|++|++ ++.+|. +..+
T Consensus 195 ~~l~-L~~L~Ls~N~l~~~~----------------~~~~~~l~~L~~L~L~~N~l-------------~~~~~~-~~~l 243 (313)
T 1ogq_A 195 ANLN-LAFVDLSRNMLEGDA----------------SVLFGSDKNTQKIHLAKNSL-------------AFDLGK-VGLS 243 (313)
T ss_dssp GGCC-CSEEECCSSEEEECC----------------GGGCCTTSCCSEEECCSSEE-------------CCBGGG-CCCC
T ss_pred hCCc-ccEEECcCCcccCcC----------------CHHHhcCCCCCEEECCCCce-------------eeecCc-cccc
Confidence 9887 999999999999755 77888999999999995554 444554 8889
Q ss_pred ccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccccccccccccCCccccccccCCccc
Q 047790 570 VQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMGSDCQ 640 (885)
Q Consensus 570 ~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~~~~c~ 640 (885)
++|++|+|++|++++.+|..+..+++|++|++++|+++|.+|....+++++.+++.+||++||.|++ .|.
T Consensus 244 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C~ 313 (313)
T 1ogq_A 244 KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-ACT 313 (313)
T ss_dssp TTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CCC
T ss_pred CCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CCC
Confidence 9999999999999999999999999999999999999999999988999999999999999999887 473
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=329.26 Aligned_cols=326 Identities=20% Similarity=0.217 Sum_probs=159.8
Q ss_pred CCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEe
Q 047790 262 SMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDL 340 (885)
Q Consensus 262 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L 340 (885)
+++++|++++|.++...+..+..+++|++|+|++|.+++.++..|..+++|++|++++|++++..|..+..+ .|++|++
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 445555555555543333334445555555555555554444455555555555555555554444444444 3555555
Q ss_pred ecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCc
Q 047790 341 QYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI 420 (885)
Q Consensus 341 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 420 (885)
++|+++...+..|..+++|++|++++|.+.+..+..|..+++|++|++++|++++. .+..+++|+.|++++|.+++.
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc
Confidence 55555544333344555555555555555544444455555555555555555432 133344555555555554432
Q ss_pred CCCccCCCCcccEEEcCCcccCccee-----EEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCccccccc
Q 047790 421 IPMEFGDCISLNTLDLGSNNLNGCVV-----VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKV 495 (885)
Q Consensus 421 ~p~~~~~l~~L~~L~Ls~N~l~~~~~-----~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 495 (885)
...++|++|++++|.++.... ++.|++++|.+++ +..+..+++|+.|++++|.+++..|..|..+++|
T Consensus 202 -----~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 274 (390)
T 3o6n_A 202 -----AIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRL 274 (390)
T ss_dssp -----ECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSC
T ss_pred -----CCCCcceEEECCCCeeeeccccccccccEEECCCCCCcc--cHHHcCCCCccEEECCCCcCCCcChhHccccccC
Confidence 112345555555555432110 0111111122222 1345555666666666666665555556666666
Q ss_pred ceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccccccc
Q 047790 496 QGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYL 575 (885)
Q Consensus 496 ~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L 575 (885)
+.|++++|++++ +|..+..+++|+.|+|++|+++ .+|..++.+++|++|
T Consensus 275 ~~L~L~~n~l~~-----------------~~~~~~~l~~L~~L~L~~n~l~--------------~~~~~~~~l~~L~~L 323 (390)
T 3o6n_A 275 ERLYISNNRLVA-----------------LNLYGQPIPTLKVLDLSHNHLL--------------HVERNQPQFDRLENL 323 (390)
T ss_dssp CEEECCSSCCCE-----------------EECSSSCCTTCCEEECCSSCCC--------------CCGGGHHHHTTCSEE
T ss_pred CEEECCCCcCcc-----------------cCcccCCCCCCCEEECCCCcce--------------ecCccccccCcCCEE
Confidence 666666666552 1333445556666666644443 345555556666666
Q ss_pred ccccccCCCCCCccccCccccceeecccCcCCCCCCCCccccccccccccCCccccc
Q 047790 576 DFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCE 632 (885)
Q Consensus 576 ~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~ 632 (885)
+|++|++++ +| +..+++|++|++++|++.+.. ....+..+....+.+++..|+
T Consensus 324 ~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~~~-~~~~~~~~~~~~~~~~~~~c~ 376 (390)
T 3o6n_A 324 YLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNS-LRALFRNVARPAVDDADQHCK 376 (390)
T ss_dssp ECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHH-HHHHTTTCCTTTBCCCCSCCC
T ss_pred ECCCCccce-eC--chhhccCCEEEcCCCCccchh-HHHHHHHHHhhcccccCceec
Confidence 666666652 33 445556666666666655432 112333444444555555553
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=345.41 Aligned_cols=332 Identities=18% Similarity=0.194 Sum_probs=216.0
Q ss_pred CCcccceecccccccccccccccCcc-ccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccC
Q 047790 232 LKKLSDLYLGIGPYQLSLFVGRITPE-IGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCT 310 (885)
Q Consensus 232 l~~L~~L~l~~n~~~~~~~~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 310 (885)
+++++.++++.+. .+.+|+. +..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++.++..|+.++
T Consensus 50 l~~l~~l~l~~~~------l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 123 (597)
T 3oja_B 50 LNNQKIVTFKNST------MRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVP 123 (597)
T ss_dssp GCCCSEEEESSCE------ESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCceEEEeeCCC------CCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCC
Confidence 3455555554332 2334443 45566666666666666655555666666666666666666666666666666
Q ss_pred CcceeeccccccCCCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEcc
Q 047790 311 NLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLS 389 (885)
Q Consensus 311 ~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 389 (885)
+|++|+|++|.+++..+..+..+ .|++|+|++|.+++..|..|..+++|+.|++++|.+.+.. +..+++|+.|+++
T Consensus 124 ~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~ 200 (597)
T 3oja_B 124 LLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVS 200 (597)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECC
T ss_pred CCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcc
Confidence 66666666666665555544444 4666666666666666666666666666666666665442 3444556666666
Q ss_pred CCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCC
Q 047790 390 SNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLT 469 (885)
Q Consensus 390 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~ 469 (885)
+|.+++. ...++|+.|++++|.++...+.. .++|+.|+|++|.++ + +..+..++
T Consensus 201 ~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~----------------~--~~~l~~l~ 254 (597)
T 3oja_B 201 YNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLT----------------D--TAWLLNYP 254 (597)
T ss_dssp SSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCC----------------C--CGGGGGCT
T ss_pred cCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCC----------------C--ChhhccCC
Confidence 6655432 22345666666666665432222 145566666665553 3 36678888
Q ss_pred CCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCce
Q 047790 470 NLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIV 549 (885)
Q Consensus 470 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 549 (885)
+|+.|+|++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++
T Consensus 255 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-----------------l~~~~~~l~~L~~L~Ls~N~l~--- 314 (597)
T 3oja_B 255 GLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-----------------LNLYGQPIPTLKVLDLSHNHLL--- 314 (597)
T ss_dssp TCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-----------------EECSSSCCTTCCEEECCSSCCC---
T ss_pred CCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-----------------CCcccccCCCCcEEECCCCCCC---
Confidence 88888888888888888888888888888888888874 2455667888888888866665
Q ss_pred eeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccccccccccccCCcc
Q 047790 550 GLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKD 629 (885)
Q Consensus 550 ~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~ 629 (885)
.+|..++.+++|++|+|++|++++ +| +..+++|++|++++|++.+..+ ...+..+....+.+++.
T Consensus 315 -----------~i~~~~~~l~~L~~L~L~~N~l~~-~~--~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~ 379 (597)
T 3oja_B 315 -----------HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQ 379 (597)
T ss_dssp -----------CCGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCC
T ss_pred -----------ccCcccccCCCCCEEECCCCCCCC-cC--hhhcCCCCEEEeeCCCCCChhH-HHHHHHHhhhccccccc
Confidence 577788888889999999998874 44 5677888889999998887532 23445566666778888
Q ss_pred cccc
Q 047790 630 LCEK 633 (885)
Q Consensus 630 ~c~~ 633 (885)
.|+.
T Consensus 380 ~C~~ 383 (597)
T 3oja_B 380 HCKI 383 (597)
T ss_dssp CCCT
T ss_pred cCCc
Confidence 8864
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=307.75 Aligned_cols=200 Identities=26% Similarity=0.365 Sum_probs=180.3
Q ss_pred eeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.++||+|+||.||+|.+ .+++.||+|++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 35699999999999999999986 45889999999766656677899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+........ .
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 9999999999864 4899999999999999999999 89999999999999999999999999999987654322 2
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 219 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 219 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 34457999999999999999999999999999999999999999653
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=307.02 Aligned_cols=206 Identities=25% Similarity=0.416 Sum_probs=175.6
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
+..+..+|++.+.||+|+||.||+|++. +++.||+|++..... ...+++.+|++++++++||||+++++++..++.
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~ 85 (294)
T 4eqm_A 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC 85 (294)
T ss_dssp SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSE
T ss_pred hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCe
Confidence 3455678999999999999999999865 588999999864332 224578899999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.++||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 86 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 86 YYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 999999999999999998654 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
............+|+.|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~ 215 (294)
T 4eqm_A 162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215 (294)
T ss_dssp -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 543333344456899999999999999999999999999999999999999754
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=314.92 Aligned_cols=267 Identities=19% Similarity=0.317 Sum_probs=182.9
Q ss_pred CCCHHHHHHHHHHHHhCC-CC-CCCCCC----CCCCCCcccCCccccC----------CcEEEEEEeccccccccccccc
Q 047790 22 DEPKQERRSLVHFKNSLQ-NP-QVLSGW----NKTTRHCHWFGVKCRH----------SRVVSLVIQTQSLKGPVSPFLF 85 (885)
Q Consensus 22 ~~~~~~~~aLl~~k~~~~-~~-~~~~~w----~~~~~~c~w~gv~c~~----------~~v~~l~l~~~~l~g~~~~~l~ 85 (885)
.+..+|++||++||+++. ++ .++.+| ....++|.|.|+.|+. .+|+.|++++++++ .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 456789999999999884 43 467889 4577899999999953 36777777777766 6666666
Q ss_pred CCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccC-------
Q 047790 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGD------- 158 (885)
Q Consensus 86 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~------- 158 (885)
.+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..|+.+++|++|+|++|++.+.+|..++.
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 6777777777777766 66666777777777777777776 56666777777777777776666666665543
Q ss_pred --CccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCccc
Q 047790 159 --IKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLS 236 (885)
Q Consensus 159 --l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 236 (885)
+++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|.. +..+++|++|++++|++.+.+
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~-l~~l~~L~~L~Ls~n~~~~~~----------- 245 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPA-IHHLPKLEELDLRGCTALRNY----------- 245 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGG-GGGCTTCCEEECTTCTTCCBC-----------
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchh-hccCCCCCEEECcCCcchhhh-----------
Confidence 556666666666665 55555556666666666666665 34443 555556666666665555444
Q ss_pred ceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceee
Q 047790 237 DLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELV 316 (885)
Q Consensus 237 ~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 316 (885)
|..++.+++|++|++++|++.+.+|..+..+++|++|+|++|.+.+.+|+.+..+++|+.++
T Consensus 246 ------------------p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~ 307 (328)
T 4fcg_A 246 ------------------PPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIIL 307 (328)
T ss_dssp ------------------CCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEE
T ss_pred ------------------HHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEe
Confidence 44555566677777777777777777777777777777777777777777777777777777
Q ss_pred ccccccC
Q 047790 317 LVNNRIS 323 (885)
Q Consensus 317 Ls~N~l~ 323 (885)
+..|.+.
T Consensus 308 l~~~~~~ 314 (328)
T 4fcg_A 308 VPPHLQA 314 (328)
T ss_dssp CCGGGSC
T ss_pred CCHHHHH
Confidence 7766554
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-34 Score=310.10 Aligned_cols=201 Identities=19% Similarity=0.217 Sum_probs=178.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.+.||+|+||.||+|+.. +++.||+|++.+.. .....++.+|+++++.++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 457999999999999999999876 58999999997642 23456788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||++||+|.+++.... .+++..++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999998543 4899999999999999999999 8999999999999999999999999999997643322
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......||+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 160 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 208 (337)
T 1o6l_A 160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208 (337)
T ss_dssp -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC
Confidence 2234457899999999999999999999999999999999999999653
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=305.44 Aligned_cols=205 Identities=24% Similarity=0.426 Sum_probs=181.1
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
...+|++.++||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 3467999999999999999999875 588999999876555556789999999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+......
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 88 YIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred ecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 99999999999876677999999999999999999999 899999999999999999999999999999876432211
Q ss_pred -------------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 818 -------------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 818 -------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
......+|+.|+|||++.+..++.++||||+|+++|||++|..||....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~ 226 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYL 226 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTS
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchh
Confidence 1114568999999999999999999999999999999999999987543
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=314.73 Aligned_cols=205 Identities=24% Similarity=0.287 Sum_probs=173.6
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhccc-CCCCccceeeeeEeCC
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGE 730 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~ 730 (885)
..+.+.+|++.++||+|+||.||+|++. +++.||+|++.+.. ......+.+|.++++.+ +||||+++++++.+.+
T Consensus 18 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~ 97 (353)
T 3txo_A 18 NRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD 97 (353)
T ss_dssp -----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred CCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC
Confidence 3456778999999999999999999875 48899999997542 23456688899999988 6999999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..|+||||++||+|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+|+.
T Consensus 98 ~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 98 RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 9999999999999999998654 4999999999999999999999 89999999999999999999999999999976
Q ss_pred ccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 174 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 227 (353)
T 3txo_A 174 GICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC
Confidence 4332 22334567999999999999999999999999999999999999999754
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-35 Score=326.27 Aligned_cols=203 Identities=24% Similarity=0.237 Sum_probs=179.5
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.++||+|+||.||+|+..+ ++.||+|++.+.. ......+.+|+.+++.++||||+++++++.+++..|+|
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 4579999999999999999998765 7889999987532 12233488999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++|+|.+++......+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+|+......
T Consensus 153 ~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp ECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 9999999999999875667999999999999999999999 8999999999999999999999999999998765544
Q ss_pred CCcccCCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
........||+.|+|||++. ...++.++||||+||++|||++|+.||...
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 284 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC
Confidence 44444567999999999987 567899999999999999999999999754
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=308.41 Aligned_cols=305 Identities=24% Similarity=0.347 Sum_probs=185.4
Q ss_pred ccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCc
Q 047790 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLK 163 (885)
Q Consensus 84 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 163 (885)
+..+++|++|++++|.+.. ++ .+..+++|++|++++|++++. |. +..+++|++|++++|.+++ + +.+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCS
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCC
Confidence 4567788888888888754 33 477788888888888888743 33 7778888888888888774 3 3577788888
Q ss_pred eEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccc
Q 047790 164 SLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIG 243 (885)
Q Consensus 164 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 243 (885)
+|++++|++++. +. +..+++|++|++++|.....++. +..+++|++|++++|.+++..+
T Consensus 114 ~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~~--~~~l~~L~~L~l~~~~~~~~~~----------------- 172 (347)
T 4fmz_A 114 ELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLSP--LSNMTGLNYLTVTESKVKDVTP----------------- 172 (347)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCGG--GTTCTTCCEEECCSSCCCCCGG-----------------
T ss_pred EEECcCCcccCc-hh-hccCCceeEEECCCCCCcccccc--hhhCCCCcEEEecCCCcCCchh-----------------
Confidence 888888887743 33 77778888888888855534443 6777777777777777653221
Q ss_pred cccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccC
Q 047790 244 PYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323 (885)
Q Consensus 244 ~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 323 (885)
+..+++|++|++++|++++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|+++
T Consensus 173 --------------~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~ 234 (347)
T 4fmz_A 173 --------------IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKIT 234 (347)
T ss_dssp --------------GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred --------------hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccC
Confidence 3344556666666666654332 5556666666666666665544 555666666666666665
Q ss_pred CCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCccccc
Q 047790 324 GSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIG 402 (885)
Q Consensus 324 ~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 402 (885)
+..+ +..+ .|++|++++|++++. ..+..+++|++|++++|.+.+. ..+..+++|++|++++|++++..|..+.
T Consensus 235 ~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 308 (347)
T 4fmz_A 235 DLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIG 308 (347)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHH
T ss_pred CCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhh
Confidence 4332 2222 455555555555442 2344455555555555555443 2345555555555555555555555555
Q ss_pred ccccccceecccccccCcCCCccCCCCcccEEEcCCccc
Q 047790 403 NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL 441 (885)
Q Consensus 403 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 441 (885)
.+++|+.|++++|++++..| +..+++|++|++++|.|
T Consensus 309 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 309 GLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp TCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred ccccCCEEEccCCccccccC--hhhhhccceeehhhhcc
Confidence 55555555555555554443 45555555555555554
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-34 Score=308.49 Aligned_cols=202 Identities=22% Similarity=0.335 Sum_probs=178.7
Q ss_pred eeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
..+++|++.+.||+|+||.||+|++ .+++.||+|++.... ....+++.+|+++++.++||||+++++++...+..|+
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 3456799999999999999999987 568999999997543 2334678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 92 v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 999999999999997654 4899999999999999999999 899999999999999999999999999999876542
Q ss_pred CCCcccCCCCCCccCCcccccCCCCC-CcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRAN-ERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ......+|+.|+|||++.+..+. .++||||+||++|+|++|+.||.+.
T Consensus 168 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 217 (328)
T 3fe3_A 168 G--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217 (328)
T ss_dssp C--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC
Confidence 2 23445799999999999988875 7899999999999999999999753
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-34 Score=313.99 Aligned_cols=203 Identities=19% Similarity=0.252 Sum_probs=177.5
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccc---cHHHHHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ---CDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~---~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
+...+|++.++||+|+||.||+|+.++ ++.||+|++++.... ....+.+|..+++++ +||||+++++++.+++..
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 128 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 128 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEE
Confidence 345679999999999999999998764 788999999765322 234578899999887 799999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
|+||||++||+|..++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++...
T Consensus 129 ~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 129 FFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 99999999999999998654 4999999999999999999999 8999999999999999999999999999997633
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ........||+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 205 ~~-~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~ 256 (396)
T 4dc2_A 205 RP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256 (396)
T ss_dssp CT-TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred cC-CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 22 22334567999999999999999999999999999999999999999643
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=321.38 Aligned_cols=204 Identities=23% Similarity=0.199 Sum_probs=179.8
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.++||+|+||.||+|+.. +++.||+|++.+.. ......+.+|.+++..++||+|+++++++.+++..|+
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 3467999999999999999999875 58999999997532 1223457889999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||++||+|.+++...+..+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 139 VmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 139 VMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp EECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 99999999999999876656999999999999999999999 899999999999999999999999999999877654
Q ss_pred CCCcccCCCCCCccCCccccc-------CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQ-------AGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~-------~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.........||+.|+|||++. +..++.++|+||+||++|||++|+.||...
T Consensus 216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 273 (412)
T 2vd5_A 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273 (412)
T ss_dssp SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence 333344567999999999987 456899999999999999999999999754
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=303.14 Aligned_cols=198 Identities=23% Similarity=0.325 Sum_probs=177.6
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.+.||+|+||.||+|+.. +++.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.+....|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 457999999999999999999875 58999999997542 23456788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||++|++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 85 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred EeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 9999999999999854 35899999999999999999999 99999999999999999999999999999987543
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......+|+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 206 (318)
T 1fot_A 159 --VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206 (318)
T ss_dssp --CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred --ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 223457899999999999999999999999999999999999999643
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=306.71 Aligned_cols=308 Identities=24% Similarity=0.345 Sum_probs=203.2
Q ss_pred CccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCC
Q 047790 107 QVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQL 186 (885)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 186 (885)
.+..+++|++|++++|.+.. +|. +..+++|++|++++|++++. |. +..+++|++|++++|++++ +| .+.++++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~~-~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQG-IEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTC
T ss_pred cchhcccccEEEEeCCcccc-chh-hhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcC
Confidence 35567788888888888873 443 77788888888888887743 33 7777888888888887774 33 57777777
Q ss_pred ccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcE
Q 047790 187 QDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKY 266 (885)
Q Consensus 187 ~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~ 266 (885)
++|++++|.++ .++. +..+++|++|++++|..... ++.+..+++|++
T Consensus 113 ~~L~l~~n~i~-~~~~--~~~l~~L~~L~l~~n~~~~~------------------------------~~~~~~l~~L~~ 159 (347)
T 4fmz_A 113 RELYLNEDNIS-DISP--LANLTKMYSLNLGANHNLSD------------------------------LSPLSNMTGLNY 159 (347)
T ss_dssp SEEECTTSCCC-CCGG--GTTCTTCCEEECTTCTTCCC------------------------------CGGGTTCTTCCE
T ss_pred CEEECcCCccc-Cchh--hccCCceeEEECCCCCCccc------------------------------ccchhhCCCCcE
Confidence 77777777776 4544 66677777777777754321 122556777888
Q ss_pred EEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccc
Q 047790 267 ISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFT 346 (885)
Q Consensus 267 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~ 346 (885)
|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+.+..+
T Consensus 160 L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~------------------- 216 (347)
T 4fmz_A 160 LTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP------------------- 216 (347)
T ss_dssp EECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-------------------
T ss_pred EEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch-------------------
Confidence 8888888875544 7778888888888888876655 6777777777777777764433
Q ss_pred cccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccC
Q 047790 347 GVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426 (885)
Q Consensus 347 ~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 426 (885)
+..+++|++|++++|.+.+..+ +..+++|++|++++|++++. ..+..+++|+.|++++|++++. ..+.
T Consensus 217 ------~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~ 284 (347)
T 4fmz_A 217 ------VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLN 284 (347)
T ss_dssp ------GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGG
T ss_pred ------hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhc
Confidence 3334444444444444443333 55556666666666666543 3466666677777777766653 3466
Q ss_pred CCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccce
Q 047790 427 DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLT 506 (885)
Q Consensus 427 ~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 506 (885)
.+++|++|++++|+++ +..|..+..+++|+.|++++|++++..| +..+++|+.|++++|.++
T Consensus 285 ~l~~L~~L~L~~n~l~----------------~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 285 NLSQLNSLFLNNNQLG----------------NEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GCTTCSEEECCSSCCC----------------GGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCCCCEEECcCCcCC----------------CcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 6677777777766653 3445666677777777777777775444 666777777777777664
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=307.74 Aligned_cols=202 Identities=24% Similarity=0.347 Sum_probs=177.6
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.++||+|+||.||+|++. +++.||+|++++.. .........|.++++.+ +||||+++++++.+.+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4567999999999999999999876 48889999997642 23456788899999877 8999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||++||+|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 95 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 9999999999999998643 4899999999999999999999 89999999999999999999999999999976433
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ........||+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 171 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 221 (345)
T 1xjd_A 171 G-DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221 (345)
T ss_dssp T-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C-CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC
Confidence 2 22234567999999999999999999999999999999999999999753
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=321.55 Aligned_cols=202 Identities=22% Similarity=0.229 Sum_probs=178.0
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.++||+|+||.||+|++.. ++.||+|++.+.. ......+.+|+++++.++||||+++++++.+++..|+
T Consensus 67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 146 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 146 (410)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 34679999999999999999998764 8889999987532 2233568899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||++||+|.+++... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.|+.+...
T Consensus 147 V~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 147 VMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp EECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence 99999999999999753 4899999999999999999999 899999999999999999999999999999877654
Q ss_pred CCCcccCCCCCCccCCcccccCCC----CCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGR----ANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.........||+.|+|||++.+.. ++.++||||+||++|||++|+.||...
T Consensus 222 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~ 276 (410)
T 3v8s_A 222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 276 (410)
T ss_dssp SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC
Confidence 333344668999999999998765 789999999999999999999999753
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=304.82 Aligned_cols=209 Identities=24% Similarity=0.302 Sum_probs=179.5
Q ss_pred eceeeeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
....+..+|++.++||+|+||.||+|++.+++.||+|++...... ....+.+|++++++++||||+++++++.+++..
T Consensus 15 ~~q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 94 (311)
T 3niz_A 15 YFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94 (311)
T ss_dssp CEECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCE
T ss_pred eecchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEE
Confidence 445677899999999999999999999988999999998754322 245788999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||+++ ++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....
T Consensus 95 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 95 TLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp EEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred EEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 999999975 888888876667999999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPEFED 868 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~~~~ 868 (885)
... .......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||......
T Consensus 171 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 226 (311)
T 3niz_A 171 IPV-RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD 226 (311)
T ss_dssp SCC-C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT
T ss_pred CCc-ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH
Confidence 422 22334568999999999876 56899999999999999999999999765443
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=310.07 Aligned_cols=204 Identities=22% Similarity=0.283 Sum_probs=179.4
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
..+...+|++.+.||+|+||.||+|++.. ++.||+|++.+.. ......+.+|+++++.++||||+++++++.+...
T Consensus 10 ~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 89 (384)
T 4fr4_A 10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEED 89 (384)
T ss_dssp CCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 34556789999999999999999998764 8889999986532 2345678899999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.|+||||+.||+|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 165 (384)
T 4fr4_A 90 MFMVVDLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML 165 (384)
T ss_dssp EEEEECCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeec
Confidence 99999999999999999854 45999999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCCcccCCCCCCccCCcccccC---CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQA---GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 166 ~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~ 220 (384)
T 4fr4_A 166 PRE--TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR 220 (384)
T ss_dssp CTT--CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred cCC--CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCC
Confidence 542 23345679999999999874 45899999999999999999999999743
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=308.18 Aligned_cols=202 Identities=23% Similarity=0.261 Sum_probs=177.8
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.++||+|+||.||+|++.. ++.||+|++.+.. ......+..|.++++.+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 45679999999999999999998765 7889999997642 23456788999999887 7999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||++||+|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999998644 4899999999999999999999 89999999999999999999999999999976432
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ........||+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 174 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 224 (353)
T 2i0e_A 174 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224 (353)
T ss_dssp T-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC
Confidence 2 22334567999999999999999999999999999999999999999753
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=306.60 Aligned_cols=201 Identities=19% Similarity=0.249 Sum_probs=176.9
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.+.||+|+||.||+|++. +++.||+|++.+.... ....+.+|.++++++ +||||+++++++.+++..|
T Consensus 7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 86 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 86 (345)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence 3467999999999999999999876 4888999999765322 235678899999887 7999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++....
T Consensus 87 lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 9999999999999998654 4899999999999999999999 89999999999999999999999999999976433
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. .......+|+.|+|||++.+..++.++|+||+||++|||++|+.||..
T Consensus 163 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 163 PG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 22 223445799999999999999999999999999999999999999964
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=298.17 Aligned_cols=201 Identities=28% Similarity=0.483 Sum_probs=180.4
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++.+.||+|+||.||+|.+.+++.||+|++.... ...+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 45799999999999999999999889999999997644 33577999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+...........
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 999999999877677999999999999999999999 89999999999999999999999999999987654332333
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....++..|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~ 210 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC
Confidence 44556788999999999999999999999999999999 9999864
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-33 Score=304.36 Aligned_cols=200 Identities=26% Similarity=0.347 Sum_probs=177.5
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc------cHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ------CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|+||.||+|++. +++.||+|++.+.... ..+.+.+|++++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 346999999999999999999876 5889999999754321 346789999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC----cEEEeeccCc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF----EAKVSDFGLA 808 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~----~vkl~Dfg~a 808 (885)
++||||++|++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++ .+||+|||.+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999999754 45999999999999999999999 89999999999999998776 7999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..+.... ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+.
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~ 221 (361)
T 2yab_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221 (361)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred eEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 8765422 233457999999999999999999999999999999999999999753
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-33 Score=303.64 Aligned_cols=202 Identities=27% Similarity=0.345 Sum_probs=168.6
Q ss_pred eeeEEeecceecccCCceEEEEEe----CCCCeEEEEEecccc----cccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM----PDQKTVAVKKLSQAT----GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~----~~~~~valK~~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
...+|++.+.||+|+||.||+|+. .+++.||+|++.+.. ......+.+|+++++.++||||+++++++..++
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence 456799999999999999999986 468999999997643 223456788999999999999999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..|+||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 9999999999999999998654 4899999999999999999999 89999999999999999999999999999876
Q ss_pred ccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... ........+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 171 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 224 (327)
T 3a62_A 171 SIHD-GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE 224 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccC-CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC
Confidence 4332 12233457899999999999999999999999999999999999999753
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-33 Score=304.14 Aligned_cols=199 Identities=20% Similarity=0.206 Sum_probs=178.3
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|++. +++.||+|++.+.. ....+++.+|+++++.++||||+++++++.++...|+
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 3467999999999999999999876 58999999986542 2345678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||++|++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 119 v~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 999999999999998654 4899999999999999999999 999999999999999999999999999999876532
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 241 (350)
T 1rdq_E 195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241 (350)
T ss_dssp ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC
Confidence 23457899999999999999999999999999999999999999653
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-33 Score=297.88 Aligned_cols=199 Identities=25% Similarity=0.294 Sum_probs=172.5
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+|++.+.||+|+||.||+|++.+++.||+|++..... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46999999999999999999988899999999865432 2346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++ ++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....... ..
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RK 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc-cc
Confidence 965 999999876667999999999999999999999 8999999999999999999999999999988765322 22
Q ss_pred ccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....+|+.|+|||++.+. .++.++||||+||++|+|++|+.||..
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 203 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2344689999999998764 589999999999999999999999965
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-33 Score=307.89 Aligned_cols=206 Identities=23% Similarity=0.294 Sum_probs=177.6
Q ss_pred eceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-----cccHHHHHHHHHHhcccCCCCccceeeeeEe
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-----GQCDREFAAEMETLDMVKHQNLVQLLGYCSV 728 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 728 (885)
.......+|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+
T Consensus 18 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~ 97 (351)
T 3c0i_A 18 DDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS 97 (351)
T ss_dssp --CCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred CCCccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 33445567999999999999999999875 58999999986432 1245789999999999999999999999999
Q ss_pred CCeeEEEEecccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc---EEE
Q 047790 729 GEEKLLVYEYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE---AKV 802 (885)
Q Consensus 729 ~~~~~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~---vkl 802 (885)
++..|+||||+++++|.+.+..+ ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++. +||
T Consensus 98 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl 174 (351)
T 3c0i_A 98 DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKL 174 (351)
T ss_dssp TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEE
T ss_pred CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEE
Confidence 99999999999999998877642 334899999999999999999999 899999999999999986554 999
Q ss_pred eeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 803 SDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 803 ~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
+|||.+....... .......+|+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 175 ~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (351)
T 3c0i_A 175 GGFGVAIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG 235 (351)
T ss_dssp CCCTTCEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred ecCcceeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC
Confidence 9999998765432 223445799999999999999999999999999999999999999965
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-33 Score=305.88 Aligned_cols=202 Identities=23% Similarity=0.276 Sum_probs=169.0
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc---ccHHHHHHHHHH-hcccCCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG---QCDREFAAEMET-LDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~---~~~~~~~~E~~~-l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.+.||+|+||.||+|++.. ++.||+|++.+... ....++..|..+ ++.++||||+++++++.+.+..|
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 34579999999999999999998764 78899999976532 223456677777 57789999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||++||+|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 116 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 9999999999999998644 4899999999999999999999 89999999999999999999999999999976433
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ........||+.|+|||++.+..++.++|+||+||++|||++|+.||...
T Consensus 192 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 242 (373)
T 2r5t_A 192 H-NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242 (373)
T ss_dssp C-CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred C-CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 2 22334567999999999999999999999999999999999999999653
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-33 Score=295.85 Aligned_cols=201 Identities=28% Similarity=0.453 Sum_probs=180.4
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++.+.||+|+||.||+|++.++..||+|++.... ....++.+|++++++++||||+++++++.++...++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 45699999999999999999999888899999997644 33577899999999999999999999999989999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+...........
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 999999999876666999999999999999999999 89999999999999999999999999999987655433333
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....++..|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccc
Confidence 44556778999999999899999999999999999999 9999864
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=304.47 Aligned_cols=206 Identities=19% Similarity=0.237 Sum_probs=179.5
Q ss_pred eceeeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
|..++..+|++.+.||+|+||.||+|++ .+++.||+|++..... ...+.+|+++++++ +||||+++++++..++..
T Consensus 3 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 80 (330)
T 2izr_A 3 GVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYN 80 (330)
T ss_dssp -CCEETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEE
T ss_pred ceEEEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCcc
Confidence 3445667899999999999999999986 4688999999865432 34688999999999 899999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc-----EEEeeccC
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE-----AKVSDFGL 807 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~-----vkl~Dfg~ 807 (885)
++||||+ +++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++. +||+|||.
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 9999999 99999999876667999999999999999999999 899999999999999998887 99999999
Q ss_pred cccccCCCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 808 ARLISDCESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 808 a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
+..+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~ 221 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK 221 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc
Confidence 9876543221 1234578999999999999999999999999999999999999998653
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=302.17 Aligned_cols=201 Identities=23% Similarity=0.424 Sum_probs=176.6
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+++|++.+.||+|+||.||+|.+ .+++.||+|++.... ......+.+|+++++.++||||+++++++...+..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 456799999999999999999987 468899999987532 2234678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+ +|++.+++.... .+++..+..++.|++.|++||| +.||+||||||+||++++++.+||+|||.+......
T Consensus 87 v~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 99999 779999887554 4899999999999999999999 899999999999999999999999999999876543
Q ss_pred CCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
. ......+++.|+|||++.+..+ +.++||||+||++|+|++|+.||....
T Consensus 162 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~ 212 (336)
T 3h4j_B 162 N--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212 (336)
T ss_dssp B--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSS
T ss_pred c--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCcc
Confidence 2 2334578999999999998876 789999999999999999999997643
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=299.44 Aligned_cols=126 Identities=22% Similarity=0.351 Sum_probs=63.2
Q ss_pred CCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccC
Q 047790 90 LRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSG 169 (885)
Q Consensus 90 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 169 (885)
++.++++++.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 344444444443 3333332 3455555555555544444555555555555555555544455555555555555555
Q ss_pred CcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCc
Q 047790 170 NGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 170 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
|+++ .+|..+. ++|++|++++|+++ .+|...+.++++|++|++++|+++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~ 160 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLE 160 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCB
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccc
Confidence 5555 3333332 45555555555554 444444555555555555555553
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-33 Score=300.45 Aligned_cols=201 Identities=24% Similarity=0.307 Sum_probs=177.7
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc------ccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG------QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
+..+|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+++++.++||||+++++++..+..
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3456999999999999999999876 488999999875432 135779999999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC----cEEEeeccC
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF----EAKVSDFGL 807 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~----~vkl~Dfg~ 807 (885)
.++||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++ .+||+|||.
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 99999999999999999754 45899999999999999999999 89999999999999998877 799999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+..+.... ......+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 165 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 220 (326)
T 2y0a_A 165 AHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220 (326)
T ss_dssp CEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred CeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 98765422 223457899999999999999999999999999999999999999653
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-33 Score=299.78 Aligned_cols=202 Identities=33% Similarity=0.503 Sum_probs=168.1
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
...+|++.+.||+|+||.||+|++ +++.||+|++..... ...+++.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 346799999999999999999987 578899999875442 22357889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 737 EYMVNGSLDDWLRNRAA--SLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~--~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
||+++++|.+++..... .+++..+..++.|++.|++||| +.| |+||||||+||+++.++.+||+|||.++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 99999999999985432 2899999999999999999999 899 9999999999999999999999999997654
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ........+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 191 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~ 242 (309)
T 3p86_A 191 ST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred cc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 32 22233457899999999999999999999999999999999999999753
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-33 Score=302.53 Aligned_cols=200 Identities=20% Similarity=0.285 Sum_probs=177.8
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 357999999999999999999876 47889999986543 3356788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC--CCcEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND--YFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~--~~~vkl~Dfg~a~~~~~~~~ 816 (885)
+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++. ++.+||+|||.+..+....
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999999999876667999999999999999999999 899999999999999986 7899999999998765422
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......+++.|+|||++.+..++.++||||+||++|+|++|..||...
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 206 (321)
T 1tki_A 159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE 206 (321)
T ss_dssp -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC
Confidence 223456899999999999988999999999999999999999999754
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-33 Score=301.47 Aligned_cols=207 Identities=37% Similarity=0.675 Sum_probs=182.2
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
...+|++.+.||+|+||.||+|++.+++.||+|++........+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEEC
T ss_pred HHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEc
Confidence 34679999999999999999999888999999998776555567899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 739 MVNGSLDDWLRNRA---ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 739 ~~~~sL~~~l~~~~---~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 117 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 193 (321)
T 2qkw_B 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD 193 (321)
T ss_dssp CTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSS
T ss_pred CCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 99999999886532 34899999999999999999999 8999999999999999999999999999998754322
Q ss_pred -CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 047790 816 -SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFED 868 (885)
Q Consensus 816 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~ 868 (885)
........+++.|+|||++.+..++.++||||+|+++|||++|+.||....+.
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~ 247 (321)
T 2qkw_B 194 QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247 (321)
T ss_dssp CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS
T ss_pred ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH
Confidence 22233345889999999999899999999999999999999999999865443
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-33 Score=296.90 Aligned_cols=202 Identities=28% Similarity=0.448 Sum_probs=177.4
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
...+|++.+.||+|+||.||+|++.++..||+|++.... ...+++.+|++++++++||||+++++++.+++..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 345799999999999999999999888899999997654 2357789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++......+++..+..++.|++.+++||| +.||+||||||+||+++.++.++|+|||.+..........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 9999999999875566999999999999999999999 8999999999999999999999999999998765433233
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.....+++.|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~ 224 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 334456788999999999999999999999999999998 9999874
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-32 Score=294.84 Aligned_cols=274 Identities=21% Similarity=0.293 Sum_probs=147.1
Q ss_pred CCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEc
Q 047790 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDF 167 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 167 (885)
+.|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|+.+++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 45666666666666555555666666666666666666555566666666666666666665 3444333 45666666
Q ss_pred cCCcCCccCCcccCCCCCCccccccccccCC-CCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccc
Q 047790 168 SGNGLNGTIPSRLGDLTQLQDLDLSDNLLSG-SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQ 246 (885)
Q Consensus 168 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~ 246 (885)
++|++++..+..|.++++|++|++++|.++. .+....+.++++|++|++++|+++. +
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l--------------------- 186 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-I--------------------- 186 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-C---------------------
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-C---------------------
Confidence 6666555444455555555555555555531 1222334555555555555555441 1
Q ss_pred ccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCC
Q 047790 247 LSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSI 326 (885)
Q Consensus 247 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 326 (885)
|..+. ++|++|++++|++++..|..+..+++|++|+|++|.+++..+..+..+++|++|++++|+++ .+
T Consensus 187 --------~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 255 (330)
T 1xku_A 187 --------PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KV 255 (330)
T ss_dssp --------CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SC
T ss_pred --------Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cC
Confidence 11111 45667777777776666666666667777777777666666666666666666666666665 33
Q ss_pred CcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccc--cCcccccc
Q 047790 327 PEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTR--QIPKKIGN 403 (885)
Q Consensus 327 p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~ 403 (885)
|..+..+ .|++|++++|++++..+..|.... .......++.|++++|.+.. +.|..|..
T Consensus 256 p~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~ 317 (330)
T 1xku_A 256 PGGLADHKYIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317 (330)
T ss_dssp CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred ChhhccCCCcCEEECCCCcCCccChhhcCCcc------------------cccccccccceEeecCcccccccCcccccc
Confidence 3333333 344444444444443333322110 00112445566666665542 34455555
Q ss_pred cccccceecccc
Q 047790 404 LTNIQILKLNSN 415 (885)
Q Consensus 404 l~~L~~L~Ls~N 415 (885)
+.+++.++|++|
T Consensus 318 ~~~l~~l~L~~N 329 (330)
T 1xku_A 318 VYVRAAVQLGNY 329 (330)
T ss_dssp CCCGGGEEC---
T ss_pred ccceeEEEeccc
Confidence 555555555555
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=310.36 Aligned_cols=200 Identities=20% Similarity=0.250 Sum_probs=174.8
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.+.||+|+||.||+|.+. +++.+|+|++..... ...+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 356999999999999999999864 588999999875432 23457889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc---CCCcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN---DYFEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~---~~~~vkl~Dfg~a~~~~~ 813 (885)
||++||+|.+.+..+. .+++..+..++.|++.|++||| +.||+||||||+||+++ +++.+||+|||.+.....
T Consensus 90 E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 90 DLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp CCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 9999999999998654 4999999999999999999999 89999999999999998 467899999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 166 ~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~ 215 (444)
T 3soa_A 166 EQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 215 (444)
T ss_dssp TC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 32 223346799999999999999999999999999999999999999964
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=297.12 Aligned_cols=196 Identities=24% Similarity=0.310 Sum_probs=176.7
Q ss_pred EeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
|...++||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 126 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG 126 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence 666779999999999999876 6999999999766656667899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccC
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTD 821 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 821 (885)
++|.+++.. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....... .....
T Consensus 127 ~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 200 (321)
T 2c30_A 127 GALTDIVSQ--VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKS 200 (321)
T ss_dssp CBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCBCC
T ss_pred CCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCc-ccccc
Confidence 999999874 34899999999999999999999 8999999999999999999999999999998765422 22334
Q ss_pred CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 822 TADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 822 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..+|+.|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~ 243 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS 243 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 5789999999999999999999999999999999999999964
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-33 Score=306.17 Aligned_cols=199 Identities=18% Similarity=0.205 Sum_probs=172.8
Q ss_pred eeEEeecceecccCCceEEEEE------eCCCCeEEEEEecccccccHHHHHHHHHHhcccC---CCCccceeeeeEeCC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGT------MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK---HQNLVQLLGYCSVGE 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~------~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~---~~~i~~~~~~~~~~~ 730 (885)
..+|++.++||+|+||.||+|. ...++.||+|++.... ...+..|+++++.++ |++|+++++++..++
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 4679999999999999999994 4468899999987643 456677777777776 899999999999999
Q ss_pred eeEEEEecccCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC----------
Q 047790 731 EKLLVYEYMVNGSLDDWLRN----RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---------- 796 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~----~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---------- 796 (885)
..++||||+++|+|.+++.. ....+++..++.++.|++.|++||| +.||+||||||+||+++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcccccc
Confidence 99999999999999999974 3455999999999999999999999 999999999999999988
Q ss_pred -CCcEEEeeccCcccccCC-CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 797 -YFEAKVSDFGLARLISDC-ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 797 -~~~vkl~Dfg~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.+.+||+|||.|+.+... .........||..|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 899999999999765421 22333456799999999999999999999999999999999999999864
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=299.41 Aligned_cols=202 Identities=28% Similarity=0.434 Sum_probs=172.3
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC----eeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE----EKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----~~~l 734 (885)
...+|++.++||+|+||.||+|++. ++.||+|++.... ........|+.++++++||||+++++++.... ..++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3468999999999999999999875 7889999986543 22345667999999999999999999987643 4699
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCC----------CceecCCCCCcEEEcCCCcEEEee
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP----------YIIHMDIKTSNILLNDYFEAKVSD 804 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~----------~i~H~dlkp~Nil~~~~~~vkl~D 804 (885)
||||+++++|.++++.. .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999999764 3899999999999999999999 88 999999999999999999999999
Q ss_pred ccCcccccCCCCC-cccCCCCCCccCCcccccCC-----CCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 805 FGLARLISDCESH-VSTDTADTIGYVPSEYGQAG-----RANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 805 fg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~-----~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
||.++.+...... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+..+
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~ 243 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Confidence 9999876543222 22335689999999998873 456688999999999999999999976543
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-33 Score=301.83 Aligned_cols=205 Identities=27% Similarity=0.452 Sum_probs=176.0
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC----CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
.+...+|++.+.||+|+||.||+|.+. .+..||+|++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 345567999999999999999999874 34569999997643 2334678999999999999999999999998899
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred cEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 99999999999999999876667999999999999999999999 899999999999999999999999999999877
Q ss_pred cCCCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 812 SDCESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 812 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
...... ......++..|+|||++.+..++.++||||+||++|||++ |+.||..
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 257 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN 257 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence 543222 1222345778999999999999999999999999999999 9999854
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-33 Score=307.37 Aligned_cols=201 Identities=20% Similarity=0.296 Sum_probs=179.2
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++..........+.+|++++++++||||+++++++.++...++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 456999999999999999999875 5888999998766544556789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc--CCCcEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN--DYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~--~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++ ..+.+||+|||.+.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999999876667999999999999999999999 89999999999999997 45679999999998765432
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 253 (387)
T 1kob_A 206 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE 253 (387)
T ss_dssp -CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred -ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC
Confidence 223346899999999999999999999999999999999999999753
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=298.32 Aligned_cols=205 Identities=23% Similarity=0.302 Sum_probs=177.2
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC--eeE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE--EKL 733 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--~~~ 733 (885)
...++|++.++||+|+||.||+|++.. ++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 446789999999999999999998765 8899999997544 334567889999999999999999999987655 779
Q ss_pred EEEecccCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE----cCCCcEEEeeccC
Q 047790 734 LVYEYMVNGSLDDWLRNRA--ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL----NDYFEAKVSDFGL 807 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~----~~~~~vkl~Dfg~ 807 (885)
+||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||++ +..+.+||+|||.
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 9999999999999998533 33899999999999999999999 8999999999999999 7778899999999
Q ss_pred cccccCCCCCcccCCCCCCccCCccccc--------CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQ--------AGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
+....... ......++..|+|||++. +..++.++||||+||++|||++|+.||.+...
T Consensus 163 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 228 (319)
T 4euu_A 163 ARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228 (319)
T ss_dssp CEECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTC
T ss_pred ceecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 98765432 223456899999999876 57789999999999999999999999976443
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=314.05 Aligned_cols=203 Identities=24% Similarity=0.280 Sum_probs=179.7
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.++||+|+||.||+|++. +++.||+|++.+.. ......+.+|++++++++||||+++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 456999999999999999999875 58999999997543 23346788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 736 YEYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
|||++||+|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++..+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999998753 345899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
... .......||+.|+|||++.+..++.++|+||+||++|||++|+.||....
T Consensus 341 ~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~ 393 (543)
T 3c4z_A 341 AGQ-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393 (543)
T ss_dssp TTC-CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred CCC-cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence 432 22334579999999999999999999999999999999999999997643
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=303.17 Aligned_cols=202 Identities=24% Similarity=0.367 Sum_probs=174.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
..+|++.++||+|+||.||+|++. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999876 688999999864432 234568899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC-C
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-S 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~-~ 816 (885)
|+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+.... .
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999988754 34899999999999999999999 8999999999999999999999999999998764322 2
Q ss_pred CcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......+|+.|+|||++.+..+ +.++||||+||++|+|++|+.||...
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 211 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 22334578999999999988776 77899999999999999999999754
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=297.14 Aligned_cols=198 Identities=24% Similarity=0.359 Sum_probs=154.6
Q ss_pred EEeec---ceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEE
Q 047790 662 IIVFE---NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 662 ~~~~~---~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 736 (885)
+|++. +.||+|+||.||+|.+. +++.||+|++.+. ......+|+++++.+. ||||+++++++.++...|+||
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 85 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVM 85 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEE
Confidence 46664 78999999999999875 5889999998654 2567789999999997 999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC---cEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF---EAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~---~vkl~Dfg~a~~~~~ 813 (885)
||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++ .+||+|||.+.....
T Consensus 86 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 86 ELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp CCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred EccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 999999999999865 45999999999999999999999 89999999999999998665 799999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
.. .......+|+.|+|||++.+..++.++||||+||++|+|++|+.||.....
T Consensus 162 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 214 (325)
T 3kn6_A 162 DN-QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDR 214 (325)
T ss_dssp -----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC----
T ss_pred CC-CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcc
Confidence 22 223345679999999999999999999999999999999999999986443
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-32 Score=297.08 Aligned_cols=292 Identities=19% Similarity=0.268 Sum_probs=191.2
Q ss_pred CCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCcccccc
Q 047790 113 RLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLS 192 (885)
Q Consensus 113 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 192 (885)
+++.++++++.++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 6778888888877 5666653 677888888888876667777888888888888888877777777778888888888
Q ss_pred ccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCC
Q 047790 193 DNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNN 272 (885)
Q Consensus 193 ~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N 272 (885)
+|+++ .+|...+ ++|++|++++|++++..+..+ ..+++|++|++++|
T Consensus 111 ~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~-----------------------------~~l~~L~~L~l~~n 157 (332)
T 2ft3_A 111 KNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVF-----------------------------SGLRNMNCIEMGGN 157 (332)
T ss_dssp SSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGG-----------------------------SSCSSCCEEECCSC
T ss_pred CCcCC-ccCcccc---ccCCEEECCCCccCccCHhHh-----------------------------CCCccCCEEECCCC
Confidence 88777 6666543 567777777776653322223 23334444444444
Q ss_pred cccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCcc
Q 047790 273 KLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVS 352 (885)
Q Consensus 273 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~ 352 (885)
.++. .+..+..+..+ +|++|++++|++++ +|..+. ..|+.|++++|++++..+..
T Consensus 158 ~l~~----------------------~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~-~~L~~L~l~~n~i~~~~~~~ 212 (332)
T 2ft3_A 158 PLEN----------------------SGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP-ETLNELHLDHNKIQAIELED 212 (332)
T ss_dssp CCBG----------------------GGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC-SSCSCCBCCSSCCCCCCTTS
T ss_pred cccc----------------------CCCCcccccCC-ccCEEECcCCCCCc-cCcccc-CCCCEEECCCCcCCccCHHH
Confidence 4431 01222333333 44444444444443 222111 24555555555555555666
Q ss_pred ccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCC----
Q 047790 353 LWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDC---- 428 (885)
Q Consensus 353 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---- 428 (885)
+..+++|+.|++++|.+.+..+..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|+|+++.+..|...
T Consensus 213 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 291 (332)
T 2ft3_A 213 LLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGV 291 (332)
T ss_dssp STTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCS
T ss_pred hcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccccccc
Confidence 666777777777777777777767777788888888888887 567778888888888888888887766666653
Q ss_pred --CcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCcc
Q 047790 429 --ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNL 480 (885)
Q Consensus 429 --~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 480 (885)
.+|+.|++++|.+.. .+..|..+..+++|+.+++++|+
T Consensus 292 ~~~~l~~L~l~~N~~~~--------------~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 292 KRAYYNGISLFNNPVPY--------------WEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSCCBSEEECCSSSSCG--------------GGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccceEeecCcccc--------------cccCcccccccchhhhhhccccc
Confidence 567888888887741 24667888888888888888875
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=291.89 Aligned_cols=198 Identities=24% Similarity=0.336 Sum_probs=172.7
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.+|++.++||+|+||.||+|++. +++.||+|++...... ....+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46999999999999999999875 5889999999754322 24678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++ ++.+.+......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....... .
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-R 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-S
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-c
Confidence 9965 677766665667999999999999999999999 8999999999999999999999999999998765422 2
Q ss_pred cccCCCCCCccCCcccccCCC-CCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGR-ANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
......+|..|+|||++.+.. ++.++||||+||++|+|++|..||.
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~ 203 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSC
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCc
Confidence 233457899999999988766 7999999999999999999998864
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-32 Score=300.89 Aligned_cols=199 Identities=23% Similarity=0.271 Sum_probs=175.4
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999875 588999999975432 23457889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC---CcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY---FEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~---~~vkl~Dfg~a~~~~~ 813 (885)
||+++++|.+++..+ ..+++..+..++.|++.|++||| +.||+||||||+||+++.+ +.+||+|||.+.....
T Consensus 108 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 999999999998754 34899999999999999999999 8999999999999999854 4599999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. ......+|+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 184 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 232 (362)
T 2bdw_A 184 SE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232 (362)
T ss_dssp CC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred Cc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 22 22345789999999999999999999999999999999999999964
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=315.41 Aligned_cols=203 Identities=24% Similarity=0.308 Sum_probs=179.7
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.++||+|+||.||+|++. +++.||+|++.+.. ......+.+|+++++.++||||+++++++.+++..|+
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3466999999999999999999875 58999999997542 2345678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 735 VYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
||||++||+|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++..+..
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999987543 34899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 339 ~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~ 389 (576)
T 2acx_A 339 GQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389 (576)
T ss_dssp TC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred Cc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence 32 2234579999999999999999999999999999999999999997643
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=304.31 Aligned_cols=201 Identities=43% Similarity=0.782 Sum_probs=178.0
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|+..+++.||+|++..... ....++.+|+++++.++||||+++++++..++..++||||
T Consensus 29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 108 (326)
T 3uim_A 29 SDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 108 (326)
T ss_dssp TTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEEC
T ss_pred hhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEe
Confidence 456999999999999999999988899999999976442 2234789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHhccCCC---CceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 739 MVNGSLDDWLRNRA---ASLDWGKRCKIAYGAARGISFLHHGFKP---YIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 739 ~~~~sL~~~l~~~~---~~~~~~~~~~i~~~l~~~l~~LH~~~~~---~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
+++++|.+++.... ..+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|||.+....
T Consensus 109 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 185 (326)
T 3uim_A 109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185 (326)
T ss_dssp CTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred ccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEECCCCCEEeccCccccccC
Confidence 99999999998533 33899999999999999999999 66 99999999999999999999999999998876
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
...........+|+.|+|||++.+..++.++||||+||++|+|++|+.||.
T Consensus 186 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 186 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp SSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred cccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence 544444555669999999999998899999999999999999999999995
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=295.34 Aligned_cols=204 Identities=23% Similarity=0.313 Sum_probs=169.5
Q ss_pred eceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--------------------------cHHHHHHH
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--------------------------CDREFAAE 707 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--------------------------~~~~~~~E 707 (885)
+..+...+|++.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|
T Consensus 7 ~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 86 (298)
T 2zv2_A 7 GDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQE 86 (298)
T ss_dssp ---CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHH
T ss_pred CCceeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHH
Confidence 34456678999999999999999999865 5888999998654211 12468899
Q ss_pred HHHhcccCCCCccceeeeeEe--CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceec
Q 047790 708 METLDMVKHQNLVQLLGYCSV--GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHM 785 (885)
Q Consensus 708 ~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~ 785 (885)
++++++++||||+++++++.+ ....++||||+++++|.++... ..+++..+..++.|++.|++||| +.||+||
T Consensus 87 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 161 (298)
T 2zv2_A 87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHR 161 (298)
T ss_dssp HHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred HHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 999999999999999999986 5688999999999999876543 45899999999999999999999 8999999
Q ss_pred CCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCC---CCCcchhHHHHHHHHHHHhCCCCC
Q 047790 786 DIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGR---ANERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 786 dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGvvl~elltg~~P~ 862 (885)
||||+||+++.++.+||+|||.+..+.... .......+|+.|+|||++.+.. ++.++||||+||++|+|++|+.||
T Consensus 162 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf 240 (298)
T 2zv2_A 162 DIKPSNLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240 (298)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCCHHHEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence 999999999999999999999998765432 2223457899999999988765 377899999999999999999999
Q ss_pred CC
Q 047790 863 GP 864 (885)
Q Consensus 863 ~~ 864 (885)
..
T Consensus 241 ~~ 242 (298)
T 2zv2_A 241 MD 242 (298)
T ss_dssp CC
T ss_pred CC
Confidence 64
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=303.59 Aligned_cols=203 Identities=28% Similarity=0.470 Sum_probs=175.1
Q ss_pred eeEEeecceecccCCceEEEEEeC--------CCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP--------DQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVG 729 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~--------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 729 (885)
..+|++.+.||+|+||.||+|++. ++..||+|+++.... ...+++.+|+++++.+ +||||+++++++..+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 356999999999999999999753 345699999976532 2346789999999999 899999999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL 794 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~ 794 (885)
+..|+||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999998643 34789999999999999999999 8999999999999999
Q ss_pred cCCCcEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 795 NDYFEAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 795 ~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+.++.+||+|||.++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~ 309 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 309 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999987654322 12233456788999999999999999999999999999999 99998753
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-33 Score=299.38 Aligned_cols=203 Identities=25% Similarity=0.395 Sum_probs=168.6
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEeccccccc---HHHHHHHHHHhcccCCCCccceeeeeEeCC----
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQC---DREFAAEMETLDMVKHQNLVQLLGYCSVGE---- 730 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~---- 730 (885)
...+|++.+.||+|+||.||+|++ .+++.||+|++....... ..++.+|++++++++||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 456799999999999999999986 568899999997654322 356889999999999999999999987654
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..|+||||+++++|.+++.... .+++..+..++.|++.+++||| +++|+||||||+||+++.++.+||+|||.+..
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred ccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 3499999999999999998654 4899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 811 ISDCESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+...... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~ 222 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 6543221 223346899999999999999999999999999999999999999754
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=312.35 Aligned_cols=202 Identities=18% Similarity=0.219 Sum_probs=168.4
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.++||+|+||.||+|.+. +++.||+|++.... .....++.+|+++++.++||||+++++++...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 3467999999999999999999865 58899999997542 2334567889999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
||||+++++|.+++.... .+++..+..++.|++.|++||| + .||+||||||+||+++.++.+||+|||+|.....
T Consensus 226 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 999999999999997654 5899999999999999999999 7 8999999999999999999999999999976433
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 302 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 352 (446)
T 4ejn_A 302 DG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 352 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 22 2234467999999999999999999999999999999999999999653
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-32 Score=308.85 Aligned_cols=203 Identities=25% Similarity=0.423 Sum_probs=179.6
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
.+.+++|.+.+.||+|+||.||+|++. +|+.||+|++.... ......+.+|+++++.++||||+++++++...+..
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 91 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDI 91 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 455678999999999999999999876 68999999997543 22346789999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....
T Consensus 92 ~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 92 FMVMEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EEEEECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 9999999999999999754 45999999999999999999999 9999999999999999999999999999998765
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. .......+++.|+|||++.+..+ +.++||||+||++|+|++|+.||...
T Consensus 168 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~ 219 (476)
T 2y94_A 168 DG--EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219 (476)
T ss_dssp TT--CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cc--ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC
Confidence 42 22334579999999999998876 68999999999999999999999753
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-32 Score=286.94 Aligned_cols=199 Identities=22% Similarity=0.279 Sum_probs=177.4
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.++||+|+||.||+|.+.. +..||+|++........+.+.+|++++++++||||+++++++.++...++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 4569999999999999999998765 778999999876666678899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccccCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||++ +.++.++|+|||.+..+....
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999999887654 4899999999999999999999 8999999999999999 788899999999998765432
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......+++.|+|||++.+. ++.++||||+|+++|+|++|+.||...
T Consensus 164 --~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~ 210 (277)
T 3f3z_A 164 --MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP 210 (277)
T ss_dssp --CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred --chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCC
Confidence 23345689999999998765 899999999999999999999999753
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-31 Score=291.02 Aligned_cols=251 Identities=23% Similarity=0.324 Sum_probs=143.5
Q ss_pred CCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccc
Q 047790 112 KRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDL 191 (885)
Q Consensus 112 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 191 (885)
.+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 35777777777776 4565543 56777777777777665666777777777777777777666777777777777777
Q ss_pred cccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecC
Q 047790 192 SDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSN 271 (885)
Q Consensus 192 s~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~ 271 (885)
++|+++ .+|..++ ++|++|++++|+++
T Consensus 108 s~n~l~-~l~~~~~---~~L~~L~l~~n~l~------------------------------------------------- 134 (330)
T 1xku_A 108 SKNQLK-ELPEKMP---KTLQELRVHENEIT------------------------------------------------- 134 (330)
T ss_dssp CSSCCS-BCCSSCC---TTCCEEECCSSCCC-------------------------------------------------
T ss_pred CCCcCC-ccChhhc---ccccEEECCCCccc-------------------------------------------------
Confidence 777776 5655432 45555555555554
Q ss_pred CcccccccccccCCCCCcEEEccCCCCcC--cccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCcccccc
Q 047790 272 NKLSGPIPRELCNSGSLVEINLDGNMLSG--TIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVI 349 (885)
Q Consensus 272 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~ 349 (885)
+..+..+..+++|++|++++|.++. ..+..+..+++|++|++++|+++. +|..+. ..|++|++++|++++..
T Consensus 135 ----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~-~~L~~L~l~~n~l~~~~ 208 (330)
T 1xku_A 135 ----KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP-PSLTELHLDGNKITKVD 208 (330)
T ss_dssp ----BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC-TTCSEEECTTSCCCEEC
T ss_pred ----ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc-ccCCEEECCCCcCCccC
Confidence 3333334444444444444444432 344455556666666666666553 222211 24555566666655555
Q ss_pred CccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCcc
Q 047790 350 PVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEF 425 (885)
Q Consensus 350 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 425 (885)
|..+..+++|++|++++|.+.+..+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|+|+++.+..|
T Consensus 209 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 209 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred HHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhc
Confidence 555555555555555555555444444555555555555555554 344455555555555555555554444444
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.1e-32 Score=288.87 Aligned_cols=201 Identities=28% Similarity=0.468 Sum_probs=179.4
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 356999999999999999999998888999999976543 3578899999999999999999999999989999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
++++|.+++......+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||.+...........
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999999999876667899999999999999999999 89999999999999999999999999999987654222223
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....++..|+|||+..+..++.++||||+|+++|+|++ |+.||..
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCC
Confidence 34456788999999998999999999999999999999 8999864
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-32 Score=297.04 Aligned_cols=201 Identities=25% Similarity=0.357 Sum_probs=161.1
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467999999999999999999875 48899999987543 2334678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 738 YMVNGSLDDWLRNRA-----ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~-----~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
|++ ++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 59999887532 34899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... .......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 160 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 212 (317)
T 2pmi_A 160 IPV-NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212 (317)
T ss_dssp SCC-CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCc-ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 422 222345689999999998764 6899999999999999999999999754
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.9e-32 Score=291.29 Aligned_cols=201 Identities=21% Similarity=0.289 Sum_probs=166.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccccc---HHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQC---DREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+++|++.+.||+|+||.||+|.+. +++.||+|++....... .+.+.+|++++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467999999999999999999875 58889999997654332 36788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|.+++.... .+++..+..++.|++.+++||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999998653 4899999999999999999999 8999999999999999999999999999988765433
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
........++..|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 237 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQG 237 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCS
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCC
Confidence 3333445689999999999999999999999999999999999999964
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-32 Score=295.54 Aligned_cols=204 Identities=28% Similarity=0.431 Sum_probs=173.2
Q ss_pred eeeeEEeecceecccCCceEEEEEe-----CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe--CC
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTM-----PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV--GE 730 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~-----~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~ 730 (885)
+...+|++.++||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++.. ..
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 3456799999999999999999983 3588999999986655555788999999999999999999998854 35
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred ceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 689999999999999999876666999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 811 ISDCESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 811 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....... ......++..|+|||++.+..++.++||||+|+++|||++|..||..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 219 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence 6543221 22234467789999999999999999999999999999999998764
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.4e-32 Score=300.90 Aligned_cols=199 Identities=26% Similarity=0.348 Sum_probs=171.0
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.+...+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 90 ~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 3444778999999999999864 588999999987655556789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE--cCCCcEEEeeccCcccccCCCCCc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL--NDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~--~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++|.+++......+++..+..++.|++.|++||| +.||+||||||+||++ +..+.+||+|||.+..+.... .
T Consensus 170 ~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~ 244 (373)
T 2x4f_A 170 GGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--K 244 (373)
T ss_dssp TCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--B
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--c
Confidence 99999988766556899999999999999999999 8999999999999999 567789999999998775432 2
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 291 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD 291 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 23446899999999999999999999999999999999999999754
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2.6e-32 Score=300.71 Aligned_cols=200 Identities=23% Similarity=0.273 Sum_probs=165.9
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|++. +++.||+|++..... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 457999999999999999999876 688999999975442 346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc--EEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE--AKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~--vkl~Dfg~a~~~~~~~~ 816 (885)
+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++. +||+|||.++.....
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-- 171 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-- 171 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--
Confidence 99999999997544 4999999999999999999999 899999999999999987665 999999998754321
Q ss_pred CcccCCCCCCccCCcccccCCCCCCc-chhHHHHHHHHHHHhCCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANER-GDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.......+|+.|+|||++.+..++.+ +||||+||++|+|++|+.||....
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC---
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCc
Confidence 22234568999999999988887655 899999999999999999997643
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=6.2e-32 Score=290.23 Aligned_cols=204 Identities=19% Similarity=0.256 Sum_probs=178.3
Q ss_pred eeeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEE
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~l 734 (885)
.++..+|++.+.||+|+||.||+|.+ .+++.||+|++.... ....+.+|+++++.+ +|++++++++++......++
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 34556799999999999999999986 568899999986543 234678899999999 69999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc-----EEEeeccCcc
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE-----AKVSDFGLAR 809 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~-----vkl~Dfg~a~ 809 (885)
||||+ +++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++. +||+|||.+.
T Consensus 84 v~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred EEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99999 99999999876667999999999999999999999 999999999999999987765 9999999998
Q ss_pred cccCCCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 810 LISDCESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 810 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
........ ......+|+.|+|||++.+..++.++||||+|+++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 222 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 222 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhh
Confidence 77543221 2234568999999999999999999999999999999999999997643
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.6e-32 Score=288.92 Aligned_cols=202 Identities=23% Similarity=0.391 Sum_probs=158.7
Q ss_pred eeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+.+|++.+.||+|+||.||+|++ .+++.||+|++.... .....++.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35699999999999999999987 468899999986532 22346789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999876667999999999999999999999 8999999999999999999999999999998765322
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 215 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCC
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCh
Confidence 1 223456899999999999999999999999999999999999999754
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.7e-32 Score=298.20 Aligned_cols=198 Identities=23% Similarity=0.325 Sum_probs=160.3
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|++.. ++.||+|++.... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 3569999999999999999998764 7889999987543 345688899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEEEeeccCcccccCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vkl~Dfg~a~~~~~~~ 815 (885)
+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++. ++.+||+|||.+......
T Consensus 130 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 130 VTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp CCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 9999999999754 34899999999999999999999 899999999999999975 789999999999876432
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 205 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 253 (349)
T 2w4o_A 205 -VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDE 253 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCT
T ss_pred -cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 2223456899999999999999999999999999999999999999653
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-31 Score=286.46 Aligned_cols=203 Identities=24% Similarity=0.318 Sum_probs=178.4
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
....+|++.+.||+|+||.||+|.+.+ ++.||+|++..... ...+.+.+|+++++.++||||+++++++.+++..+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 91 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence 345789999999999999999998764 78899999865432 23457889999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 92 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 92 VVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 9999999999999887543 4899999999999999999999 89999999999999999999999999999987653
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. .......++..|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 168 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 218 (294)
T 2rku_A 168 DG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218 (294)
T ss_dssp TT-CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred Cc-cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 22 2233456899999999999999999999999999999999999999753
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-32 Score=301.17 Aligned_cols=203 Identities=26% Similarity=0.313 Sum_probs=175.1
Q ss_pred eeeEEeecceecccCCceEEEEEe----CCCCeEEEEEecccc----cccHHHHHHHHHHhccc-CCCCccceeeeeEeC
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM----PDQKTVAVKKLSQAT----GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVG 729 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~----~~~~~valK~~~~~~----~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 729 (885)
.+.+|++.+.||+|+||.||+|+. .+++.||+|++++.. ......+.+|+++++.+ +||||+++++++..+
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence 346799999999999999999987 368999999987542 22345677899999999 599999999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
...++||||+++++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 132 TKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp TEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred ceEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 99999999999999999998654 4899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+............+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 265 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence 765433333444578999999999886 34789999999999999999999999754
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-32 Score=302.45 Aligned_cols=202 Identities=28% Similarity=0.480 Sum_probs=164.9
Q ss_pred eeEEeecceecccCCceEEEEEeC----CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...|.+.+.||+|+||.||+|++. ++..||+|+++... ....+++.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 356899999999999999999865 57789999997543 2334678999999999999999999999999899999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999877667999999999999999999999 899999999999999999999999999999876543
Q ss_pred CCCc--ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 815 ESHV--STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 815 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.... .....++..|+|||++.+..++.++|||||||++||+++ |+.||..
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~ 253 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTT
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence 2211 112234678999999999999999999999999999998 9999864
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-31 Score=291.57 Aligned_cols=202 Identities=24% Similarity=0.323 Sum_probs=178.3
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc---ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG---QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|.+.+ ++.||+|++..... ...+.+.+|+++++.++||||+++++++.+++..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 45789999999999999999998765 78899999875432 234678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++.... .+++..+..++.|++.+++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 119 v~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 999999999999987643 4899999999999999999999 899999999999999999999999999999876532
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. .......++..|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 195 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 244 (335)
T 2owb_A 195 G-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244 (335)
T ss_dssp T-CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred c-ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC
Confidence 2 2233456899999999999999999999999999999999999999753
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.6e-32 Score=296.49 Aligned_cols=200 Identities=24% Similarity=0.360 Sum_probs=168.1
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCC--CCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKH--QNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|...+++.||+|++..... .....+.+|++++++++| |||+++++++..+...++
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 3567999999999999999999998899999999875432 234678899999999986 999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|||+ .+++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++ ++.+||+|||.+..+...
T Consensus 87 v~e~-~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 87 VMEC-GNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp EECC-CSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EEeC-CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 9995 588999999864 45899999999999999999999 89999999999999997 568999999999876543
Q ss_pred CCC-cccCCCCCCccCCcccccC-----------CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESH-VSTDTADTIGYVPSEYGQA-----------GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 222 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence 222 2334578999999999865 6788899999999999999999999974
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.98 E-value=9e-36 Score=341.20 Aligned_cols=63 Identities=22% Similarity=0.293 Sum_probs=32.4
Q ss_pred CCCCEEeccCCcCCCCCCcc-ccccccccEeeeeccCCCC----CCCccccCCccCceEEccCCcCCc
Q 047790 112 KRLKMLSVGENQLSGSIPSQ-LGLLTRLETISLRSNSFTG----EMPSELGDIKQLKSLDFSGNGLNG 174 (885)
Q Consensus 112 ~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~ 174 (885)
++|++|+|++|+++...... +..+++|++|+|++|.++. .++..+..+++|++|+|++|++++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 70 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGD 70 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHH
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCCh
Confidence 34556666666655332222 4455556666666665553 223444455555555555555543
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-31 Score=289.88 Aligned_cols=202 Identities=26% Similarity=0.335 Sum_probs=169.6
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-----cccHHHHHHHHHHhcccC---CCCccceeeeeEe
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-----GQCDREFAAEMETLDMVK---HQNLVQLLGYCSV 728 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-----~~~~~~~~~E~~~l~~l~---~~~i~~~~~~~~~ 728 (885)
+...+|++.++||+|+||.||+|++. +++.||+|++.... ......+.+|+++++.++ ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 34578999999999999999999864 58899999986432 122356777888877765 9999999999876
Q ss_pred CC-----eeEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEE
Q 047790 729 GE-----EKLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKV 802 (885)
Q Consensus 729 ~~-----~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl 802 (885)
.. ..++||||+. ++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEE
Confidence 54 5789999996 59999998643 33899999999999999999999 899999999999999999999999
Q ss_pred eeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 803 SDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 803 ~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+|||.+...... .......+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 162 ~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 222 (308)
T 3g33_A 162 ADFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 222 (308)
T ss_dssp CSCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS
T ss_pred eeCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999876532 2223457899999999999999999999999999999999999999653
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-31 Score=299.82 Aligned_cols=203 Identities=18% Similarity=0.232 Sum_probs=176.3
Q ss_pred eeEEeecceeccc--CCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 660 IAIIVFENVIGGG--GFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 660 ~~~~~~~~~lG~G--~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
+++|++.++||+| +||.||+|++. +++.||+|++..... .....+.+|+++++.++||||+++++++..++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999876 589999999975432 234568889999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 735 VYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
||||+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999754 345899999999999999999999 89999999999999999999999999998865432
Q ss_pred CC------CCcccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CE------SHVSTDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~------~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ........++..|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 11 111223468889999999988 67899999999999999999999999754
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.98 E-value=8.3e-32 Score=319.46 Aligned_cols=202 Identities=23% Similarity=0.261 Sum_probs=177.7
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.++||+|+||.||+|++.. ++.||+|++++.. ....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 34679999999999999999998764 7889999997542 23456788899999887 6899999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++|+|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+|+....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999998654 4999999999999999999999 89999999999999999999999999999986433
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 495 ~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~ 545 (674)
T 3pfq_A 495 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 545 (674)
T ss_dssp T-TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C-CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC
Confidence 2 22344567999999999999999999999999999999999999999753
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.98 E-value=6e-32 Score=298.87 Aligned_cols=202 Identities=19% Similarity=0.253 Sum_probs=169.1
Q ss_pred eeEEeecceecccCCceEEEEEeCC------CCeEEEEEecccccc-----------cHHHHHHHHHHhcccCCCCccce
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATGQ-----------CDREFAAEMETLDMVKHQNLVQL 722 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~~-----------~~~~~~~E~~~l~~l~~~~i~~~ 722 (885)
..+|++.++||+|+||.||+|.+.. ++.||+|++...... .......|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3589999999999999999998755 478999998654311 11234456666778889999999
Q ss_pred eeeeEeC----CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc--C
Q 047790 723 LGYCSVG----EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN--D 796 (885)
Q Consensus 723 ~~~~~~~----~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~--~ 796 (885)
++++... ...++||||+ +++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCC
Confidence 9998764 4579999999 99999999877677999999999999999999999 89999999999999998 8
Q ss_pred CCcEEEeeccCcccccCCCCCc------ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 797 YFEAKVSDFGLARLISDCESHV------STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 797 ~~~vkl~Dfg~a~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
++.+||+|||.++.+....... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 8999999999998765432111 12344899999999999999999999999999999999999999753
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-31 Score=285.26 Aligned_cols=200 Identities=26% Similarity=0.411 Sum_probs=173.6
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|.+.. ++.||+|++.... ......+.+|+++++.++||||+++++++.+....++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 45679999999999999999998654 7789999986532 2235678899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+......
T Consensus 87 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 999999999999998654 4899999999999999999999 999999999999999999999999999988654432
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 210 (279)
T 3fdn_A 163 ---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC
Confidence 223456899999999999999999999999999999999999999743
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=8.3e-32 Score=291.15 Aligned_cols=201 Identities=26% Similarity=0.332 Sum_probs=169.6
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.++||+|+||.||+|.+.. ++.||+|++...... ..+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 4679999999999999999998764 889999998654422 2456789999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||++++++.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+........
T Consensus 82 e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp ECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 999999999887744 45899999999999999999999 89999999999999999999999999999987654222
Q ss_pred CcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++.+ ..++.++||||+|+++|+|++|+.||...
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 206 (311)
T 4agu_A 158 -YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGK 206 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred -ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 2234568999999999876 56799999999999999999999999754
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-32 Score=290.35 Aligned_cols=203 Identities=25% Similarity=0.378 Sum_probs=164.1
Q ss_pred eeeEEeecceecccCCceEEEEEeCC----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.+.||+|+||.||+|.+.. +..||+|++..... ...+.+.+|++++++++||||+++++++. ++..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 34679999999999999999998643 45699999875432 23467889999999999999999999984 56789
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCc
Confidence 999999999999999876667999999999999999999999 89999999999999999999999999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
..........+++.|+|||++.+..++.++||||+|+++|||++ |..||...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~ 221 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 221 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcC
Confidence 33333333456788999999999999999999999999999997 99999754
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-32 Score=297.03 Aligned_cols=197 Identities=23% Similarity=0.319 Sum_probs=170.7
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++.+.... ..+|++++.++ +||||+++++++.+++..|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3456999999999999999999876 4888999999765422 34688888887 7999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC----CcEEEeeccCccccc
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY----FEAKVSDFGLARLIS 812 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~----~~vkl~Dfg~a~~~~ 812 (885)
||++||+|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||++.+. +.+||+|||.+....
T Consensus 96 E~~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 999999999999854 45899999999999999999999 8999999999999998533 359999999998765
Q ss_pred CCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... .......+|+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 172 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 222 (342)
T 2qr7_A 172 AEN-GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN 222 (342)
T ss_dssp CTT-CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred CCC-CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCC
Confidence 432 223445789999999999888899999999999999999999999975
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-32 Score=295.32 Aligned_cols=204 Identities=23% Similarity=0.307 Sum_probs=165.7
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
....+.+|++.++||+|+||.||+|.+. +++.||+|++...... ....+.+|++++++++||||+++++++.+++..
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 3456678999999999999999999865 5889999999754322 235677999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-----CCCcEEEeeccC
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-----DYFEAKVSDFGL 807 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-----~~~~vkl~Dfg~ 807 (885)
++||||+++ +|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++ ..+.+||+|||.
T Consensus 109 ~lv~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 109 HLIFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEEEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEEEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999999974 9999998654 4899999999999999999999 89999999999999994 455699999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+....... .......+|..|+|||++.+. .++.++||||+||++|+|++|+.||...
T Consensus 184 a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 241 (329)
T 3gbz_A 184 ARAFGIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccCCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 98765322 222345679999999998875 4899999999999999999999999653
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=288.99 Aligned_cols=200 Identities=26% Similarity=0.328 Sum_probs=177.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc------cHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ------CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|++++++++||||+++++++.++...
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456999999999999999999876 5889999998754321 356799999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC----cEEEeeccCc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF----EAKVSDFGLA 808 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~----~vkl~Dfg~a 808 (885)
++||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++ .++|+|||.+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999999854 45899999999999999999999 89999999999999999887 7999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 221 (321)
T 2a2a_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221 (321)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred eecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC
Confidence 8765422 223456899999999999999999999999999999999999999653
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-32 Score=303.14 Aligned_cols=202 Identities=28% Similarity=0.427 Sum_probs=175.0
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
..+|++.+.||+|+||.||+|++. +++.||+|+++.... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 356899999999999999999986 688999999875432 223468899999999999999999999998889999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++++|.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++.........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999876666899999999999999999999 899999999999999999999999999999765432111
Q ss_pred cc-cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 818 VS-TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 818 ~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.. ....++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~ 318 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPN 318 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 11 12234678999999998899999999999999999998 9999864
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=298.33 Aligned_cols=199 Identities=23% Similarity=0.268 Sum_probs=163.5
Q ss_pred eeeEEeec-ceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhc-ccCCCCccceeeeeEe----CCe
Q 047790 659 VIAIIVFE-NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLD-MVKHQNLVQLLGYCSV----GEE 731 (885)
Q Consensus 659 ~~~~~~~~-~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~-~l~~~~i~~~~~~~~~----~~~ 731 (885)
++.+|.+. ++||+|+||.||+|.+. +++.||+|++.. ...+.+|++++. ..+||||+++++++.. +..
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 34456665 78999999999999875 588899999853 245678888874 4579999999998865 567
Q ss_pred eEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEEEeeccC
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAKVSDFGL 807 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vkl~Dfg~ 807 (885)
.|+||||+++|+|.+++..+. ..+++..+..++.|++.|++||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence 899999999999999998643 35899999999999999999999 899999999999999987 78899999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
+....... ......+|+.|+|||++.+..++.++||||+||++|+|++|+.||.....
T Consensus 211 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 268 (400)
T 1nxk_A 211 AKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 268 (400)
T ss_dssp CEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTT
T ss_pred ccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcc
Confidence 98755322 22345689999999999999999999999999999999999999976543
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-32 Score=286.82 Aligned_cols=202 Identities=24% Similarity=0.357 Sum_probs=171.5
Q ss_pred eeeEEeecceecccCCceEEEEEeCC----CCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.+.||+|+||.||+|.+.+ +..||+|++.... ....+++.+|+++++.++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 34579999999999999999998543 3359999987653 2345678999999999999999999999864 4568
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999999877667999999999999999999999 89999999999999999999999999999987655
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
..........++..|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~ 217 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCccc
Confidence 33333344557789999999998999999999999999999998 9999964
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=291.38 Aligned_cols=199 Identities=24% Similarity=0.352 Sum_probs=168.7
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC--------
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE-------- 730 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-------- 730 (885)
.+|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 56999999999999999999876 68999999997543 234567899999999999999999999885533
Q ss_pred -------------------------------------------------eeEEEEecccCCCHHHHHhhcCC--CCCHHH
Q 047790 731 -------------------------------------------------EKLLVYEYMVNGSLDDWLRNRAA--SLDWGK 759 (885)
Q Consensus 731 -------------------------------------------------~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~ 759 (885)
..++||||+++++|.+++..... ..++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 37999999999999999986432 255667
Q ss_pred HHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC-----------CcccCCCCCCcc
Q 047790 760 RCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES-----------HVSTDTADTIGY 828 (885)
Q Consensus 760 ~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~-----------~~~~~~~~~~~y 828 (885)
+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+........ .......+|+.|
T Consensus 166 ~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 8999999999999999 89999999999999999999999999999987754321 122335689999
Q ss_pred CCcccccCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 047790 829 VPSEYGQAGRANERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 829 ~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~ 862 (885)
+|||++.+..++.++||||+||++|||++|..|+
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~ 276 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ 276 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence 9999999999999999999999999999998775
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=297.75 Aligned_cols=202 Identities=29% Similarity=0.457 Sum_probs=175.3
Q ss_pred eeEEeecceecccCCceEEEEEeC--------CCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP--------DQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVG 729 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~--------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 729 (885)
..+|++.++||+|+||.||+|++. ++..||+|++..... ....++.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 356999999999999999999853 235799999876532 2346788999999999 899999999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL 794 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~ 794 (885)
+..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 99999999999999999998643 34899999999999999999999 8999999999999999
Q ss_pred cCCCcEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 795 NDYFEAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 795 ~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+.++.+||+|||.+........ .......++..|+|||++.+..++.++||||+||++|+|++ |..||..
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~ 296 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999987654322 22333456788999999999999999999999999999999 9999864
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=291.09 Aligned_cols=202 Identities=25% Similarity=0.341 Sum_probs=169.7
Q ss_pred eEEee-cceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEe
Q 047790 661 AIIVF-ENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 661 ~~~~~-~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.+|++ ++.||+|+||.||+|.+. +++.||+|++..........+.+|+++++++ +||||+++++++.+++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 45887 478999999999999865 5889999999776555667899999999885 69999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc---EEEeeccCcccccCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE---AKVSDFGLARLISDC 814 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~---vkl~Dfg~a~~~~~~ 814 (885)
|+++++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++. +||+|||.+......
T Consensus 92 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 999999999998654 4899999999999999999999 899999999999999987765 999999998765421
Q ss_pred CC------CcccCCCCCCccCCcccccC-----CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 815 ES------HVSTDTADTIGYVPSEYGQA-----GRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 815 ~~------~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.. .......+++.|+|||++.+ ..++.++||||+||++|+|++|+.||....
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 230 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccc
Confidence 11 11223458999999999875 457899999999999999999999998654
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=298.13 Aligned_cols=200 Identities=24% Similarity=0.372 Sum_probs=167.1
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+|++.++||+|+||.||+|++. +++.||+|++...... ....+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46999999999999999999876 6889999998654322 122455799999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++ +++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....... ..
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KT 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc-cc
Confidence 96 5999999877777999999999999999999999 8999999999999999999999999999987654322 22
Q ss_pred ccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS 204 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 234567999999999877 56899999999999999999999999754
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=283.82 Aligned_cols=199 Identities=29% Similarity=0.480 Sum_probs=171.0
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccccc-------HHHHHHHHHHhcccCCCCccceeeeeEeC
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQC-------DREFAAEMETLDMVKHQNLVQLLGYCSVG 729 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~-------~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 729 (885)
+...+|++.+.||+|+||.||+|++. +++.||+|++....... .+.+.+|++++++++||||+++++++.+.
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP 95 (287)
T ss_dssp CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence 34467999999999999999999874 68899999986543221 16788999999999999999999998655
Q ss_pred CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEcCCCc-----EEE
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLNDYFE-----AKV 802 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~~~~~-----vkl 802 (885)
. ++||||+++++|.+.+......+++..+..++.|++.|++||| +.+ |+||||||+||+++.++. +||
T Consensus 96 ~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 96 P--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp T--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred C--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 4 6999999999999998877777999999999999999999999 889 999999999999987776 999
Q ss_pred eeccCcccccCCCCCcccCCCCCCccCCccccc--CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 803 SDFGLARLISDCESHVSTDTADTIGYVPSEYGQ--AGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 803 ~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+|||.+..... ......+++.|+|||++. ...++.++||||+||++|+|++|+.||...
T Consensus 171 ~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 231 (287)
T 4f0f_A 171 ADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231 (287)
T ss_dssp CCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 99999875432 233457899999999984 455788999999999999999999999753
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-35 Score=339.93 Aligned_cols=359 Identities=21% Similarity=0.226 Sum_probs=220.4
Q ss_pred CCCCEEecCCCcccCcCCcC-ccCcCCCCEEeccCCcCCC----CCCccccccccccEeeeeccCCCCCCCcccc-CCc-
Q 047790 88 SSLRILDLSKNLLFGQLSPQ-VSNLKRLKMLSVGENQLSG----SIPSQLGLLTRLETISLRSNSFTGEMPSELG-DIK- 160 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~- 160 (885)
++|++|||++|.++...... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.++...+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45677788777776543333 6677788888888888764 3456667778888888888887654443332 344
Q ss_pred ---cCceEEccCCcCCc----cCCcccCCCCCCccccccccccCCCCCcc----cccccccccEEEeecccCcccCCccc
Q 047790 161 ---QLKSLDFSGNGLNG----TIPSRLGDLTQLQDLDLSDNLLSGSLPVS----LLKNLQSLSYLDVSNNLLSGNIPPEI 229 (885)
Q Consensus 161 ---~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~~l~~L~~L~Ls~N~l~~~~p~~~ 229 (885)
+|++|+|++|+++. .+|..+..+++|++|+|++|.+++..+.. .....++|++|++++|++++..+
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~--- 159 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASC--- 159 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGH---
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHH---
Confidence 58888888888773 45777778888888888888876322222 12234568888888887764221
Q ss_pred cCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccC-----CCCCcEEEccCCCCcCc---
Q 047790 230 GNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCN-----SGSLVEINLDGNMLSGT--- 301 (885)
Q Consensus 230 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~-----l~~L~~L~L~~N~l~~~--- 301 (885)
..++..+..+++|++|++++|.+++..+..+.. .++|++|++++|.+++.
T Consensus 160 ----------------------~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 217 (461)
T 1z7x_W 160 ----------------------EPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR 217 (461)
T ss_dssp ----------------------HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH
T ss_pred ----------------------HHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHH
Confidence 112333445566666666666666544443332 44667777777766653
Q ss_pred -ccccccccCCcceeeccccccCCCC-----CcccCCC-CceeEEeecCccccc----cCccccCccccceeeccccccc
Q 047790 302 -IEDVFDRCTNLSELVLVNNRISGSI-----PEYISEL-PLKVFDLQYNNFTGV----IPVSLWNSENLMEFNAASNLLE 370 (885)
Q Consensus 302 -~~~~~~~l~~L~~L~Ls~N~l~~~~-----p~~~~~~-~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 370 (885)
++..+..+++|++|++++|++++.. +..+... .|++|++++|+++.. ++..+..+++|++|++++|.+.
T Consensus 218 ~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 297 (461)
T 1z7x_W 218 DLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 297 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH
T ss_pred HHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCc
Confidence 3455566677777777777665422 1111122 566666666666654 3455555666777777777665
Q ss_pred CCCccccccc-----ccccEEEccCCccccc----CcccccccccccceecccccccCcCCCccCC-----CCcccEEEc
Q 047790 371 GSLSWEISNA-----VALEKLDLSSNMLTRQ----IPKKIGNLTNIQILKLNSNFFDGIIPMEFGD-----CISLNTLDL 436 (885)
Q Consensus 371 ~~~~~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L 436 (885)
...+..+... ++|++|++++|.+++. ++..+..+++|+.|+|++|.+++..+..+.. .++|++|++
T Consensus 298 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 377 (461)
T 1z7x_W 298 DEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWL 377 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEEC
Confidence 4443333332 5677777777777654 3455566677777777777776554433332 557777777
Q ss_pred CCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccC
Q 047790 437 GSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTG 483 (885)
Q Consensus 437 s~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 483 (885)
++|++++.. ...+|..+..+++|++|++++|++++
T Consensus 378 ~~n~i~~~~------------~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 378 ADCDVSDSS------------CSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp TTSCCCHHH------------HHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred CCCCCChhh------------HHHHHHHHHhCCCccEEECCCCCCCH
Confidence 777664110 01456666777777777777777764
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=304.79 Aligned_cols=200 Identities=28% Similarity=0.298 Sum_probs=167.2
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC----
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG---- 729 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---- 729 (885)
+.+..+|++.++||+|+||.||+|.+. +++.||+|++.... .....++.+|+++++.++||||+++++++...
T Consensus 58 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 137 (464)
T 3ttj_A 58 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE 137 (464)
T ss_dssp EEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTT
T ss_pred eeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccc
Confidence 345678999999999999999999865 48889999997542 23356788999999999999999999998654
Q ss_pred --CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 730 --EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 730 --~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
...|+||||+++ ++.+.+.. .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+
T Consensus 138 ~~~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 138 EFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp TCCEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred cCCeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 357999999965 57666653 3899999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
|+..... .......+|+.|+|||++.+..++.++||||+||++|||++|+.||.+.
T Consensus 211 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 211 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp C-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9876542 2234457899999999999999999999999999999999999999654
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=292.45 Aligned_cols=218 Identities=23% Similarity=0.245 Sum_probs=182.4
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--------cHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--------CDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
..+|++.+.||+|+||.||+|++. +++.||+|++...... ....+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 457999999999999999999864 5888999998754311 2235778999999999999999999999999
Q ss_pred eeEEEEecccCC-CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 731 EKLLVYEYMVNG-SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 731 ~~~lv~e~~~~~-sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
..++||||+.+| +|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 999999999766 9999998543 4999999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCC---------CCCCCCHHHHHH
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPEFE---------DKDGGNLVDWVL 879 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~~~---------~~~~~~l~~~~~ 879 (885)
...... ......+|+.|+|||++.+..+ +.++||||+||++|+|++|+.||..... ......+.+.+.
T Consensus 179 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~l~~li~ 256 (335)
T 3dls_A 179 YLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVS 256 (335)
T ss_dssp ECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCCCSSCCCHHHHHHHH
T ss_pred ECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhccCCCcccCHHHHHHHH
Confidence 765432 2234568999999999998877 7899999999999999999999974221 112334566666
Q ss_pred HHHh
Q 047790 880 LMMK 883 (885)
Q Consensus 880 ~~~~ 883 (885)
.|+.
T Consensus 257 ~~L~ 260 (335)
T 3dls_A 257 GLLQ 260 (335)
T ss_dssp HHTC
T ss_pred HHcc
Confidence 6654
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=282.84 Aligned_cols=199 Identities=23% Similarity=0.273 Sum_probs=174.8
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 357999999999999999999875 488999999865432 23467889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc---EEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE---AKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~---vkl~Dfg~a~~~~~ 813 (885)
||+++++|.+.+.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++. +||+|||.+.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999999887654 4899999999999999999999 899999999999999986555 99999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 209 (284)
T 3kk8_A 161 SE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209 (284)
T ss_dssp SC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred Cc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC
Confidence 32 22345789999999999999999999999999999999999999854
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=288.97 Aligned_cols=200 Identities=25% Similarity=0.397 Sum_probs=173.3
Q ss_pred eEEeecceecccCCceEEEEEe-----CCCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeC--Cee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM-----PDQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~-----~~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~ 732 (885)
..|++.+.||+|+||.||+|++ .+++.||+|++.... .....++.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4589999999999999999983 358899999997543 33457889999999999999999999999876 568
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+..+.
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999776667999999999999999999999 8999999999999999999999999999998775
Q ss_pred CCCC--CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 813 DCES--HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 813 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
.... .......++..|+|||++.+..++.++||||+|+++|+|++|..|+.
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 5332 22334567888999999999999999999999999999999998864
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-32 Score=306.72 Aligned_cols=199 Identities=29% Similarity=0.485 Sum_probs=174.8
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
..|++.++||+|+||.||+|.+.++..||+|+++... ...+.+.+|++++++++||||+++++++. ++..++||||++
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~ 265 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA 265 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence 4689999999999999999999888999999997644 34678999999999999999999999986 567899999999
Q ss_pred CCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 741 NGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 741 ~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+|+|.+++... ...+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++..........
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 342 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence 99999999753 234888999999999999999999 89999999999999999999999999999987654222222
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....++..|+|||++....++.++|||||||++|||++ |+.||..
T Consensus 343 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~ 388 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388 (454)
T ss_dssp CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC
Confidence 33446778999999999999999999999999999999 9999964
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=296.01 Aligned_cols=199 Identities=23% Similarity=0.358 Sum_probs=168.7
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--cccHHHHHHHHHHhcccC--CCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVK--HQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~--~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.+.||+|+||.||+|...+++.||+|++.... ......+.+|++++++++ ||||+++++++..++..|+|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 45799999999999999999998889999999986543 223467899999999997 59999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|| +.+++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++ ++.+||+|||++..+....
T Consensus 135 ~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp EE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred Ee-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 99 55889999998654 5899999999999999999999 99999999999999996 4789999999998765432
Q ss_pred CC-cccCCCCCCccCCcccccC-----------CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SH-VSTDTADTIGYVPSEYGQA-----------GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 269 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence 22 2344579999999999865 3688899999999999999999999975
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-32 Score=302.50 Aligned_cols=205 Identities=23% Similarity=0.301 Sum_probs=176.2
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC--eeE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE--EKL 733 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--~~~ 733 (885)
....+|++.++||+|+||.||+|++.. ++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 346789999999999999999998765 8999999997543 234567889999999999999999999988654 679
Q ss_pred EEEecccCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE----cCCCcEEEeeccC
Q 047790 734 LVYEYMVNGSLDDWLRNRA--ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL----NDYFEAKVSDFGL 807 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~----~~~~~vkl~Dfg~ 807 (885)
+||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||++ +..+.+||+|||.
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 9999999999999998532 33899999999999999999999 8999999999999999 7777899999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccC--------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQA--------GRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
++...... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||.+...
T Consensus 163 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~ 228 (396)
T 4eut_A 163 ARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228 (396)
T ss_dssp CEECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTC
T ss_pred ceEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc
Confidence 98765432 2234568999999998765 4667899999999999999999999976544
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=282.60 Aligned_cols=200 Identities=22% Similarity=0.361 Sum_probs=176.9
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 4467999999999999999999876 47789999986532 2235678999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+......
T Consensus 92 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 999999999999998654 4899999999999999999999 999999999999999999999999999998765432
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......++..|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 168 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 215 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP 215 (284)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC
Confidence 223456899999999999999999999999999999999999999753
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=286.86 Aligned_cols=199 Identities=24% Similarity=0.368 Sum_probs=173.1
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+..+|++.+.||+|+||.||+|++. +++.||+|++..........+.+|++++++++||||+++++++.+....++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3457999999999999999999875 689999999986554445678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccccCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||++ ++++.++|+|||.+......
T Consensus 87 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 87 LVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred cCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 999999999987554 4899999999999999999999 8999999999999999 77889999999998764331
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......+++.|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 209 (304)
T 2jam_A 163 ---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE 209 (304)
T ss_dssp ---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 12234589999999999999999999999999999999999999864
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=284.99 Aligned_cols=200 Identities=33% Similarity=0.513 Sum_probs=175.4
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++. ++..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 35699999999999999999998888899999987643 34678999999999999999999999986 45689999999
Q ss_pred cCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||++++++.+||+|||.+..........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 9999999997532 24899999999999999999999 8999999999999999999999999999998776533333
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.....++..|+|||++.+..++.++||||+|+++|||++ |+.||..
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 213 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence 334456788999999998889999999999999999999 9999864
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-32 Score=298.64 Aligned_cols=203 Identities=28% Similarity=0.391 Sum_probs=173.4
Q ss_pred eeeEEeecceecccCCceEEEEEeC------CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
...+|++.++||+|+||.||+|++. +++.||+|++.... .....++.+|+.++++++||||+++++++.....
T Consensus 69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 3467999999999999999999843 46689999997543 2334578899999999999999999999999899
Q ss_pred eEEEEecccCCCHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC---cEEE
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF---EAKV 802 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~---~vkl 802 (885)
.++||||+++++|.+++.... ..+++..+..++.|++.|++||| ++||+||||||+||+++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEE
Confidence 999999999999999998643 34899999999999999999999 89999999999999998554 5999
Q ss_pred eeccCcccccCCC-CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 803 SDFGLARLISDCE-SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 803 ~Dfg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+|||.++.+.... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~ 289 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999997653221 122233457889999999999999999999999999999998 9999864
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=282.14 Aligned_cols=204 Identities=25% Similarity=0.408 Sum_probs=170.8
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
+.+..++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+++++.++||||+++++++...+.
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 85 (276)
T 2h6d_A 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTD 85 (276)
T ss_dssp -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCe
Confidence 3456678999999999999999999876 68999999986542 2335678899999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.++||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+...
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 86 FFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 999999999999999998654 4899999999999999999999 899999999999999999999999999998876
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... ......+++.|+|||++.+..+ +.++||||+|+++|+|++|+.||...
T Consensus 162 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 214 (276)
T 2h6d_A 162 SDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214 (276)
T ss_dssp CC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 5422 2234468899999999988765 68999999999999999999999653
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=293.82 Aligned_cols=199 Identities=24% Similarity=0.298 Sum_probs=174.2
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC-----CCCccceeeeeEeCCe
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK-----HQNLVQLLGYCSVGEE 731 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-----~~~i~~~~~~~~~~~~ 731 (885)
++..+|++.++||+|+||.||+|++. +++.||+|++.... ........|+++++.++ ||||+++++++...+.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~ 110 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH 110 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence 34567999999999999999999874 58889999986432 23456778999999886 9999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC--------------
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-------------- 796 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-------------- 796 (885)
.++||||+ +++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.
T Consensus 111 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhccc
Confidence 99999999 899999998643 35899999999999999999999 899999999999999975
Q ss_pred -----------CCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 797 -----------YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 797 -----------~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+.+||+|||.+..... ......+|+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSD----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTS----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCCEEEEeccCceecCC----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 78899999999986443 223457899999999999999999999999999999999999999754
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=292.10 Aligned_cols=205 Identities=21% Similarity=0.357 Sum_probs=159.9
Q ss_pred eeeeEEeecceecccCCceEEEEEeCCCC----eEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPDQK----TVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~~~----~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
+...+|++.+.||+|+||.||+|++.... .||+|++.... ....+++.+|++++++++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 34567999999999999999999876533 79999987542 3345678999999999999999999999987655
Q ss_pred e------EEEEecccCCCHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcE
Q 047790 732 K------LLVYEYMVNGSLDDWLRNRA-----ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA 800 (885)
Q Consensus 732 ~------~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~v 800 (885)
. ++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCE
Confidence 4 89999999999999986422 24899999999999999999999 8999999999999999999999
Q ss_pred EEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 801 KVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
||+|||.+........ .......+++.|+|||++.+..++.++||||+||++|+|++ |+.||...
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 243 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI 243 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc
Confidence 9999999987654322 22233456778999999999999999999999999999999 99999753
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-32 Score=295.63 Aligned_cols=202 Identities=30% Similarity=0.524 Sum_probs=174.7
Q ss_pred eeEEeecceecccCCceEEEEEeCC------CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|+||.||+|++.+ ++.||+|+++.... .....+.+|++++++++||||+++++++.+++..
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 3568999999999999999998743 47899999976432 2346789999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCC
Q 047790 733 LLVYEYMVNGSLDDWLRNRA-----------------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKT 789 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~-----------------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp 789 (885)
++||||+++++|.+++.... ..+++..+..++.|+++|++||| +.||+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCc
Confidence 99999999999999998632 45899999999999999999999 89999999999
Q ss_pred CcEEEcCCCcEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 790 SNILLNDYFEAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 790 ~Nil~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+||+++.++.+||+|||.+........ .......++..|+|||++.+..++.++||||+|+++|||++ |..||..
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 999999999999999999977643221 22234467889999999999999999999999999999999 9999864
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-32 Score=293.35 Aligned_cols=207 Identities=25% Similarity=0.356 Sum_probs=180.2
Q ss_pred eceeeeeEEeecceecccCCceEEEEEe-----CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeE--
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTM-----PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCS-- 727 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~-----~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-- 727 (885)
+..+...+|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 96 (327)
T 3lxl_A 17 PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP 96 (327)
T ss_dssp CCBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred hhhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC
Confidence 3455567899999999999999999983 358889999998765555677999999999999999999999886
Q ss_pred eCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 728 VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 728 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
.....++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 97 GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEccccc
Confidence 456789999999999999999875556999999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 808 ARLISDCESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 808 a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
+......... ......++..|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 232 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS 232 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 9876543322 22344578889999999999999999999999999999999999753
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-32 Score=287.18 Aligned_cols=202 Identities=29% Similarity=0.445 Sum_probs=178.5
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
...+|++.+.||+|+||.||+|.+.+ ++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 34569999999999999999998765 7889999987543 335678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 738 YMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|+++++|.+++... ...+++..+..++.|++.+++||| +.||+||||||+||+++.++.++|+|||.+........
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 99999999999863 345899999999999999999999 89999999999999999999999999999987765443
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.......++..|+|||++.+..++.++||||+|+++|+|++ |..||..
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~ 215 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 33444556788999999999999999999999999999999 9999865
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=294.02 Aligned_cols=202 Identities=23% Similarity=0.316 Sum_probs=169.4
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc-----cHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ-----CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++...... ....+.+|+++++.++||||+++++++.+.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 3467999999999999999999876 4889999998753321 124678999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||+++ ++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+.
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 999999976 899998876667899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... .......+|+.|+|||++.+. .++.++||||+||++|+|++|..||...
T Consensus 164 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~ 216 (346)
T 1ua2_A 164 SPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD 216 (346)
T ss_dssp SCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 432 223345789999999998764 5789999999999999999999998653
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=283.47 Aligned_cols=196 Identities=31% Similarity=0.457 Sum_probs=162.0
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEeccccc----ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG----QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.+.||+|+||.||+|.+. ++.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 457999999999999999999875 78899999875432 2346788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCC---ceecCCCCCcEEEcC--------CCcEEEee
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY---IIHMDIKTSNILLND--------YFEAKVSD 804 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~---i~H~dlkp~Nil~~~--------~~~vkl~D 804 (885)
|||+++++|.+++.. ..+++..+..++.|++.|++||| +.| |+||||||+||+++. ++.++++|
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999999864 35899999999999999999999 777 999999999999985 67899999
Q ss_pred ccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 805 FGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 805 fg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
||.+..+.... .....+++.|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 160 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 216 (271)
T 3dtc_A 160 FGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred CCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99998765422 2234689999999999999999999999999999999999999975
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-32 Score=288.47 Aligned_cols=195 Identities=27% Similarity=0.421 Sum_probs=171.2
Q ss_pred eeEEeecceecccCCceEEEEEeCC-C-------CeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-Q-------KTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~-------~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
..+|++.+.||+|+||.||+|.+.. + ..||+|++........+.+.+|++++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 4579999999999999999998654 3 4699999977666667889999999999999999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc--------EEEe
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE--------AKVS 803 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~--------vkl~ 803 (885)
.++||||+++++|.+++......+++..+..++.|++.|++||| ++||+||||||+||+++.++. +|++
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999876656999999999999999999999 899999999999999988776 9999
Q ss_pred eccCcccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCC
Q 047790 804 DFGLARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 804 Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~ 862 (885)
|||.+...... ....++..|+|||++.+ ..++.++||||+|+++|||++|..|+
T Consensus 164 Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~ 218 (289)
T 4fvq_A 164 DPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218 (289)
T ss_dssp CCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence 99998664321 22346788999999988 67899999999999999999965544
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-31 Score=285.37 Aligned_cols=199 Identities=26% Similarity=0.366 Sum_probs=173.5
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|.+.. ++.||+|++.... ....+.+|++++++++||||+++++++..+...++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 4569999999999999999998764 8899999987543 346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++......+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||.+..+.... ..
T Consensus 106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~ 181 (314)
T 3com_A 106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-AK 181 (314)
T ss_dssp CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-SC
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-cc
Confidence 9999999999866667999999999999999999999 8999999999999999999999999999998765422 22
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 227 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD 227 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 3345689999999999999999999999999999999999999964
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-31 Score=283.48 Aligned_cols=205 Identities=22% Similarity=0.298 Sum_probs=171.3
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeee-EeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYC-SVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~-~~~~~~~lv~ 736 (885)
+..+|++.+.||+|+||.||+|++ .+++.||+|++..... ...+.+|+++++.++|++++..+.++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999986 5688999998654332 23578899999999988777666654 6778889999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~~~ 813 (885)
||+ +++|.+++......+++..+..++.|++.|++||| +.||+||||||+||++ +.++.+||+|||.+.....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 99999999866667999999999999999999999 8999999999999999 7888999999999987654
Q ss_pred CCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 047790 814 CESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDK 869 (885)
Q Consensus 814 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~~ 869 (885)
.... ......++..|+|||++.+..++.++||||+||++|+|++|+.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 222 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT 222 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhh
Confidence 3221 2234568999999999999999999999999999999999999998654443
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=285.51 Aligned_cols=196 Identities=22% Similarity=0.239 Sum_probs=166.2
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.+|++.++||+|+||.||+|++. +++.||+|++...... .......|+..+.++ +||||+++++++.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 56999999999999999999876 6899999998654322 233455566555555 8999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||+ +++|.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||.+......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 999 77999998877777999999999999999999999 899999999999999999999999999998876542
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
.......+|+.|+|||++.+ .++.++||||+||++|||++|..|+.
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~ 256 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPH 256 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCS
T ss_pred CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 22334568999999999886 78999999999999999999976654
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=298.70 Aligned_cols=201 Identities=28% Similarity=0.377 Sum_probs=162.3
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccC-CCCccceeeeeEeCC--ee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGE--EK 732 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~--~~ 732 (885)
+..+|++.+.||+|+||.||+|.+. +++.||+|++.... .....++.+|+.+++.+. ||||+++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 3467999999999999999999864 58899999986542 233467889999999998 999999999997544 68
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
|+||||++ ++|.+++... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+|+.+.
T Consensus 87 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999996 5999998753 4899999999999999999999 8999999999999999999999999999998654
Q ss_pred CCC--------------------CCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCE--------------------SHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~--------------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... ........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 311 111233568999999999887 67899999999999999999999999754
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=296.56 Aligned_cols=201 Identities=25% Similarity=0.335 Sum_probs=175.9
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+...+|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 34567999999999999999999876 58899999987543 23346789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|||+++++|.+++.... .+++..+..++.|++.+++||| +. ||+||||||+||+++.++.++|+|||.+..+...
T Consensus 110 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp ECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred EECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 99999999999998654 4899999999999999999999 75 9999999999999999999999999998765431
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......+++.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 223346899999999999999999999999999999999999999653
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-31 Score=281.76 Aligned_cols=200 Identities=25% Similarity=0.328 Sum_probs=174.0
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc------ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG------QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|++++++++||||+++++++..+...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 356999999999999999999876 589999999865431 1357899999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC----cEEEeeccCc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF----EAKVSDFGLA 808 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~----~vkl~Dfg~a 808 (885)
++||||+++++|.+++.... .+++..+..++.|++.|++||| +.|++||||||+||+++.++ .++|+|||.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 99999999999999997543 4899999999999999999999 89999999999999998776 7999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 160 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 214 (283)
T 3bhy_A 160 HKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE 214 (283)
T ss_dssp EECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred eeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc
Confidence 8765422 223346899999999999999999999999999999999999999754
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=294.60 Aligned_cols=206 Identities=23% Similarity=0.299 Sum_probs=179.1
Q ss_pred eeceeeeeEEeecceecccCCceEEEEEeCCCCeEEEEEeccccccc-----------------HHHHHHHHHHhcccCC
Q 047790 654 VGSVLVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQC-----------------DREFAAEMETLDMVKH 716 (885)
Q Consensus 654 ~g~~~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~-----------------~~~~~~E~~~l~~l~~ 716 (885)
.......++|++.+.||+|+||.||+|.+ +++.||+|++....... ...+.+|++++++++|
T Consensus 24 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 102 (348)
T 2pml_X 24 KEKDKYINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKN 102 (348)
T ss_dssp SSSCEEETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCC
T ss_pred hhcccccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCC
Confidence 33345567899999999999999999998 89999999987543211 1789999999999999
Q ss_pred CCccceeeeeEeCCeeEEEEecccCCCHHHH------Hhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCC-CCceecCCC
Q 047790 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDW------LRNR-AASLDWGKRCKIAYGAARGISFLHHGFK-PYIIHMDIK 788 (885)
Q Consensus 717 ~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~------l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~-~~i~H~dlk 788 (885)
|||+++++++.+.+..++||||+++++|.++ +... ...+++..+..++.|++.|++||| + .||+|||||
T Consensus 103 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~ 179 (348)
T 2pml_X 103 EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVK 179 (348)
T ss_dssp TTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCC
T ss_pred CCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCC
Confidence 9999999999999999999999999999998 5532 456999999999999999999999 7 999999999
Q ss_pred CCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCC-CCCC-cchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 789 TSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG-RANE-RGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 789 p~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
|+||+++.++.++|+|||.+...... ......++..|+|||+..+. .++. ++||||+|+++|+|++|+.||....
T Consensus 180 p~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 180 PSNILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp GGGEEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred hHhEEEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999876542 23445789999999999887 5665 9999999999999999999997543
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=293.33 Aligned_cols=202 Identities=24% Similarity=0.340 Sum_probs=172.8
Q ss_pred eeEEeecceecccCCceEEEEEe-CCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEe--------
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSV-------- 728 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-------- 728 (885)
+.+|++.++||+|+||.||+|++ .+++.||+|++..... .....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 35799999999999999999987 4689999999865432 234678899999999999999999999876
Q ss_pred CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 729 GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 729 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
.+..++||||+++ ++.+.+......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3468999999965 888888766667999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCC---CCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCE---SHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..+.... ........+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 232 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 8765322 122234568999999998876 45799999999999999999999999754
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-32 Score=297.97 Aligned_cols=203 Identities=27% Similarity=0.408 Sum_probs=172.8
Q ss_pred eeEEeecceecccCCceEEEEEe------CCCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCC-
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGE- 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~- 730 (885)
..+|++.+.||+|+||.||+|++ .+++.||+|++..... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 46799999999999999999973 2467899999976443 2345789999999999 7899999999987754
Q ss_pred eeEEEEecccCCCHHHHHhhcCC---------------------------------------------------------
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAA--------------------------------------------------------- 753 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~--------------------------------------------------------- 753 (885)
..++||||+++|+|.+++.....
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 48999999999999999975432
Q ss_pred --------CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC-CcccCCCC
Q 047790 754 --------SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES-HVSTDTAD 824 (885)
Q Consensus 754 --------~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~ 824 (885)
.+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+........ .......+
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 257 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence 1889999999999999999999 89999999999999999999999999999987644222 22334557
Q ss_pred CCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 825 TIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 825 ~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
|..|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 299 (359)
T 3vhe_A 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299 (359)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence 889999999999999999999999999999998 99999754
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=289.32 Aligned_cols=202 Identities=27% Similarity=0.385 Sum_probs=170.5
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
...+|++.+.||+|+||.||+|++.. ++.||+|++...... ..+.+.+|++++++++||||+++++++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 45679999999999999999998765 889999998654322 235678999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||++++++.++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+....
T Consensus 103 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 103 FEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 9999998888876643 45999999999999999999999 8999999999999999999999999999997765422
Q ss_pred CCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......++..|+|||++.+. .++.++||||+||++|+|++|+.||...
T Consensus 179 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 179 -EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred -cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 223345689999999998875 7899999999999999999999999754
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=281.34 Aligned_cols=200 Identities=24% Similarity=0.340 Sum_probs=170.1
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
..+|++.++||+|+||.||+|+.. +++.+|+|++.... ....+.+.+|++++++++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 356999999999999999999875 58899999987654 3345789999999999999999999999999999999999
Q ss_pred cccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccc
Q 047790 738 YMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLI 811 (885)
Q Consensus 738 ~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~ 811 (885)
|+++++|.+++.. ....+++..+..++.|++.|++||| +.||+||||||+||++ +..+.+||+|||.+..+
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 9999999998864 3456999999999999999999999 8999999999999999 45678999999999876
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... .......++..|+|||++. ..++.++||||+|+++|+|++|+.||...
T Consensus 178 ~~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~ 228 (285)
T 3is5_A 178 KSD--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT 228 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCc--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC
Confidence 542 2233456899999999876 56889999999999999999999999653
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-31 Score=282.01 Aligned_cols=203 Identities=22% Similarity=0.301 Sum_probs=174.2
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeee-EeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYC-SVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~-~~~~~~~lv~ 736 (885)
+..+|++.+.||+|+||.||+|++ .+++.||+|++..... ..++.+|+++++.++|+++++.+.++ ......++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 446799999999999999999986 5688999999865432 34688999999999998866666554 6677889999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~~~ 813 (885)
||+ +++|.+++......+++..+..++.|++.|++||| +.||+||||||+||++ +.++.+||+|||.+.....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 999 89999999866667999999999999999999999 8999999999999999 4788999999999987655
Q ss_pred CCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 814 CESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 814 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
.... ......++..|+|||++.+..++.++||||+||++|+|++|+.||.....
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 220 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA 220 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCc
Confidence 3321 12345689999999999999999999999999999999999999986443
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=288.43 Aligned_cols=202 Identities=30% Similarity=0.479 Sum_probs=175.8
Q ss_pred eEEeecceecccCCceEEEEEe------CCCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
.+|++.+.||+|+||.||+|++ .+++.||+|++..... ...+.+.+|+++++++ +||||+++++++..++..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 5699999999999999999974 3467899999975442 2346788999999999 899999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCC-----------------CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAA-----------------SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~-----------------~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~ 795 (885)
++||||+++++|.+++..... .+++..+..++.|++.|++||| +.||+||||||+||+++
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLT 179 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEc
Confidence 999999999999999986432 3899999999999999999999 89999999999999999
Q ss_pred CCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 796 DYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 796 ~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.++.+||+|||.+......... ......++..|+|||++.+..++.++||||+|+++|+|++ |+.||...
T Consensus 180 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 251 (313)
T 1t46_A 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (313)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 9999999999999876543222 2233456788999999999999999999999999999999 99998754
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=289.63 Aligned_cols=195 Identities=27% Similarity=0.384 Sum_probs=171.5
Q ss_pred eEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.+|++.+.||+|+||.||+|+. .+++.||+|++...... ..+++.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3488999999999999999986 46889999998754322 2356889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||+. |++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9996 5888888766667999999999999999999999 899999999999999999999999999999765432
Q ss_pred CcccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....+|+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 255 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2346899999999884 56789999999999999999999999864
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=303.48 Aligned_cols=199 Identities=32% Similarity=0.507 Sum_probs=169.2
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
..|++.++||+|+||.||+|.+.++..||+|+++... ...+.+.+|++++++++||||+++++++.. +..++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 4589999999999999999999888889999997644 335789999999999999999999999875 67899999999
Q ss_pred CCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 741 NGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 741 ~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+|+|.+++... ...+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||.++..........
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 338 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence 99999999753 345899999999999999999999 89999999999999999999999999999987654332223
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....++..|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 339 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~ 384 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 384 (452)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred cCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCC
Confidence 33456788999999999999999999999999999999 9999865
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=291.62 Aligned_cols=205 Identities=26% Similarity=0.411 Sum_probs=170.0
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCC-CCe----EEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPD-QKT----VAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~----valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
.+...+|++.++||+|+||.||+|++.. ++. ||+|.+.... .....++.+|++++++++||||+++++++....
T Consensus 11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp ECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS
T ss_pred hcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC
Confidence 3445679999999999999999998643 443 5778775433 344578999999999999999999999998654
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.++|+||+++|+|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred -eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 77899999999999999877777999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 811 ISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
....... ......++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 223 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC
Confidence 6543322 2233456789999999999999999999999999999999 99999753
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=278.95 Aligned_cols=197 Identities=27% Similarity=0.408 Sum_probs=169.9
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEe----CCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSV----GEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~----~~~~ 732 (885)
...|.+.+.||+|+||.||+|.+. ++..||+|++.... ......+.+|++++++++||||+++++++.. +...
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 456899999999999999999875 47889999987543 2334678899999999999999999998865 3568
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEc-CCCcEEEeeccCcc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLN-DYFEAKVSDFGLAR 809 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~-~~~~vkl~Dfg~a~ 809 (885)
++||||+++++|.+++.... .+++..+..++.|++.|++||| +.+ |+||||||+||+++ .++.+||+|||.+.
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 99999999999999998643 4899999999999999999999 888 99999999999997 78899999999987
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..... ......+++.|+|||++.+ .++.++||||+|+++|+|++|+.||..
T Consensus 181 ~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~ 231 (290)
T 1t4h_A 181 LKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp GCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccc---ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence 64432 2234568999999998874 589999999999999999999999965
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=303.86 Aligned_cols=196 Identities=24% Similarity=0.319 Sum_probs=155.5
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC----
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG---- 729 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---- 729 (885)
+.+..+|++.++||+|+||.||+|.+. +++.||+|++.... ....+++.+|+++++.++||||+++++++...
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 128 (458)
T 3rp9_A 49 WQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEK 128 (458)
T ss_dssp CCSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred CccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCccc
Confidence 345578999999999999999999865 58899999986543 22346788999999999999999999998543
Q ss_pred -CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 730 -EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 730 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
...|+||||+ +++|.+++... ..+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+|
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 129 FDELYVVLEIA-DSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CCCEEEEECCC-SEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred CceEEEEEecc-ccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccc
Confidence 5689999998 57999998754 45999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCC--------------------------CcccCCCCCCccCCcccc-cCCCCCCcchhHHHHHHHHHHHh
Q 047790 809 RLISDCES--------------------------HVSTDTADTIGYVPSEYG-QAGRANERGDIYSFGVILLELVT 857 (885)
Q Consensus 809 ~~~~~~~~--------------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslGvvl~ellt 857 (885)
+....... .......+|+.|+|||++ .+..++.++||||+||++|||++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 87643211 112334679999999976 56679999999999999999999
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=280.91 Aligned_cols=198 Identities=26% Similarity=0.390 Sum_probs=176.4
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++..+...++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 45899999999999999999864 58899999987543 33457899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++.. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+..+.... ..
T Consensus 102 ~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 175 (303)
T 3a7i_A 102 LGGGSALDLLEP--GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IK 175 (303)
T ss_dssp CTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-CC
T ss_pred CCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc-cc
Confidence 999999999874 35899999999999999999999 8999999999999999999999999999998765432 22
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 221 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 221 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCC
Confidence 2345689999999999999999999999999999999999999864
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=307.35 Aligned_cols=201 Identities=29% Similarity=0.445 Sum_probs=177.3
Q ss_pred eEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|++.++||+|+||.||+|.+.. +..||+|+++... ...+.+.+|++++++++||||+++++++..+...++||||+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 458899999999999999999875 8889999997643 34678999999999999999999999999989999999999
Q ss_pred cCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++|+|.+++... ...+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++.........
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence 999999999853 345899999999999999999999 8999999999999999999999999999998765433223
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.....++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~ 423 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423 (495)
T ss_dssp CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence 333456778999999999999999999999999999999 99998653
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=291.92 Aligned_cols=205 Identities=25% Similarity=0.427 Sum_probs=171.6
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCC-CCe----EEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPD-QKT----VAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~----valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
.+...+|++.++||+|+||.||+|.+.. ++. ||+|.+.... ......+.+|++++++++||||+++++++. ++
T Consensus 9 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~ 87 (325)
T 3kex_A 9 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GS 87 (325)
T ss_dssp BCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BS
T ss_pred hcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CC
Confidence 3445679999999999999999998654 444 7777765432 223356778999999999999999999886 46
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.
T Consensus 88 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence 688999999999999999866556899999999999999999999 89999999999999999999999999999988
Q ss_pred ccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 811 ISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+...... ......++..|+|||++.+..++.++||||+||++|+|++ |+.||...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 221 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 221 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcccc
Confidence 7543322 2334557789999999999999999999999999999999 99999753
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=291.84 Aligned_cols=200 Identities=18% Similarity=0.231 Sum_probs=165.9
Q ss_pred eeEEeecceecccCCceEEEEEeC----CCCeEEEEEecccccc-----------cHHHHHHHHHHhcccCCCCccceee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQATGQ-----------CDREFAAEMETLDMVKHQNLVQLLG 724 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~~~-----------~~~~~~~E~~~l~~l~~~~i~~~~~ 724 (885)
..+|++.+.||+|+||.||+|.+. .+..+|+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 468999999999999999999875 5778999998754321 1234667888899999999999999
Q ss_pred eeEe----CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC--
Q 047790 725 YCSV----GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-- 798 (885)
Q Consensus 725 ~~~~----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-- 798 (885)
++.. ....++||||+ +++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9887 67889999999 999999998654 5899999999999999999999 89999999999999998777
Q ss_pred cEEEeeccCcccccCCCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 799 EAKVSDFGLARLISDCESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 799 ~vkl~Dfg~a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.+||+|||.++.+...... ......++..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 262 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 9999999999876432211 11345689999999999999999999999999999999999999964
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=287.54 Aligned_cols=202 Identities=20% Similarity=0.294 Sum_probs=171.9
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|.+.. ++.||+|++.........++.+|+++++.++||||+++++++..++..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 3569999999999999999998764 889999998766655678899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+++++|.+++......+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||.+...... ...
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 173 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQK 173 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc-ccc
Confidence 9999999998876667999999999999999999999 899999999999999999999999999987543221 111
Q ss_pred ccCCCCCCccCCcccc-----cCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYG-----QAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~-----~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....++..|+|||++ .+..++.++||||+|+++|+|++|+.||...
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 225 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 2234688999999987 4677899999999999999999999998753
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-31 Score=283.49 Aligned_cols=201 Identities=32% Similarity=0.515 Sum_probs=168.8
Q ss_pred eEEeecceecccCCceEEEEEeCC----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeee-EeCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYC-SVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~-~~~~~~~l 734 (885)
.+|++.++||+|+||.||+|.+.+ ...+|+|.+..... ...+.+.+|++++++++||||+++++++ ..++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 469999999999999999998643 23588998875432 2346788999999999999999999985 45567899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||++++++.+||+|||.+..+...
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999999876677899999999999999999999 899999999999999999999999999999876542
Q ss_pred CC---CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 815 ES---HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 815 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.. .......+++.|+|||++.+..++.++||||+|+++|+|++ |.+||..
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~ 235 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 235 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 21 12233456788999999999999999999999999999999 5555543
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-32 Score=299.63 Aligned_cols=198 Identities=14% Similarity=0.158 Sum_probs=161.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHH---HhcccCCCCcccee-------ee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEME---TLDMVKHQNLVQLL-------GY 725 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~---~l~~l~~~~i~~~~-------~~ 725 (885)
..+|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++ ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 578999999999999999999964 58999999997432 233567889994 55556799999998 55
Q ss_pred eEeCC-----------------eeEEEEecccCCCHHHHHhhcCCC------CCHHHHHHHHHHHHHHHHHHhccCCCCc
Q 047790 726 CSVGE-----------------EKLLVYEYMVNGSLDDWLRNRAAS------LDWGKRCKIAYGAARGISFLHHGFKPYI 782 (885)
Q Consensus 726 ~~~~~-----------------~~~lv~e~~~~~sL~~~l~~~~~~------~~~~~~~~i~~~l~~~l~~LH~~~~~~i 782 (885)
+..++ ..|+||||+ +|+|.+++...... +++..+..++.|++.|++||| +.||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 55443 278999999 67999999854321 224788889999999999999 8999
Q ss_pred eecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCC-----------CCCCcchhHHHHHH
Q 047790 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG-----------RANERGDIYSFGVI 851 (885)
Q Consensus 783 ~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~DvwslGvv 851 (885)
+||||||+||+++.++.+||+|||++..... ......+ +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 2234456 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCCCC
Q 047790 852 LLELVTGKQPTGPEF 866 (885)
Q Consensus 852 l~elltg~~P~~~~~ 866 (885)
+|||++|+.||....
T Consensus 303 l~elltg~~Pf~~~~ 317 (377)
T 3byv_A 303 IYWIWCADLPITKDA 317 (377)
T ss_dssp HHHHHHSSCCC----
T ss_pred HHHHHHCCCCCcccc
Confidence 999999999997543
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=285.17 Aligned_cols=202 Identities=27% Similarity=0.422 Sum_probs=167.0
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcc--cCCCCccceeeeeEe----CCee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDM--VKHQNLVQLLGYCSV----GEEK 732 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~~~~~~~----~~~~ 732 (885)
+..+|++.++||+|+||.||+|++ +++.||+|++.... ...+..|.+++.. ++||||+++++++.. ....
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 456799999999999999999987 68899999986542 4455566666665 789999999998654 2457
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC-----CCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF-----KPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~-----~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
++||||+++++|.++++. ..+++..+..++.|++.|++|||... +.+|+||||||+||+++.++.+||+|||.
T Consensus 82 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 899999999999999964 34899999999999999999999321 57899999999999999999999999999
Q ss_pred cccccCCCCCc---ccCCCCCCccCCcccccCC------CCCCcchhHHHHHHHHHHHhC----------CCCCCCCC
Q 047790 808 ARLISDCESHV---STDTADTIGYVPSEYGQAG------RANERGDIYSFGVILLELVTG----------KQPTGPEF 866 (885)
Q Consensus 808 a~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGvvl~elltg----------~~P~~~~~ 866 (885)
+.......... .....+|+.|+|||++.+. .++.++||||+||++|||++| +.||....
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 97765432221 2334789999999998887 445789999999999999999 88886543
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=287.81 Aligned_cols=203 Identities=30% Similarity=0.457 Sum_probs=175.4
Q ss_pred eeEEeecceecccCCceEEEEEe------CCCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|+||.||+|.+ .+++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45699999999999999999975 2357899999975432 3346788999999999999999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCC
Q 047790 733 LLVYEYMVNGSLDDWLRNRA-----------------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKT 789 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~-----------------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp 789 (885)
++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 99999999999999998543 23789999999999999999999 89999999999
Q ss_pred CcEEEcCCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 790 SNILLNDYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 790 ~Nil~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+||+++.++.+||+|||.+......... ......+++.|+|||++.+..++.++||||+|+++|||++ |..||...
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999876543222 2233456788999999999899999999999999999999 99998753
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=281.67 Aligned_cols=200 Identities=24% Similarity=0.418 Sum_probs=172.2
Q ss_pred EEeecc-eecccCCceEEEEEeC---CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 662 IIVFEN-VIGGGGFRTAFKGTMP---DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 662 ~~~~~~-~lG~G~~g~vy~a~~~---~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.|.+.+ .||+|+||.||+|.+. ++..||+|++.... ....+.+.+|++++++++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 455555 9999999999999754 57789999997643 23456788999999999999999999999 456789999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+........
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999999866667999999999999999999999 89999999999999999999999999999987754322
Q ss_pred Cc--ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 817 HV--STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 817 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.. .....++..|+|||++.+..++.++||||+|+++|+|++ |+.||...
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 217 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 21 223346789999999998889999999999999999998 99999753
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-31 Score=284.12 Aligned_cols=202 Identities=22% Similarity=0.315 Sum_probs=165.0
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|.. .+++.||+|++.... .....++.+|++++++++||||+++++++..++..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 345699999999999999999986 468999999987532 2234578899999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 735 VYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
||||+++++|.+++.. ....+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||.+...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999874 3455899999999999999999999 899999999999999999999999999998776
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.... .......++..|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 187 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 238 (310)
T 2wqm_A 187 SSKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred cCCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 5422 222344688999999999999999999999999999999999999964
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=284.21 Aligned_cols=202 Identities=31% Similarity=0.465 Sum_probs=162.4
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCCCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+..++|++.++||+|+||.||+|++.+ .||+|+++.... ...+.+.+|++++++++||||++++++. .....++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence 4456679999999999999999998643 599999875432 2346789999999999999999999965 4566899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+......
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccc
Confidence 99999999999999876677999999999999999999999 899999999999999999999999999998765432
Q ss_pred C-CCcccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 E-SHVSTDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~-~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
. ........+++.|+|||++. +..++.++||||+|+++|+|++|+.||..
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 227 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccc
Confidence 1 22223456899999999987 56678899999999999999999999975
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=291.73 Aligned_cols=202 Identities=22% Similarity=0.220 Sum_probs=169.2
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-----cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-----GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 467999999999999999999874 58889999986542 234567899999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhhc---------------------------------------CCCCCHHHHHHHHHHHHHHHHHH
Q 047790 734 LVYEYMVNGSLDDWLRNR---------------------------------------AASLDWGKRCKIAYGAARGISFL 774 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~---------------------------------------~~~~~~~~~~~i~~~l~~~l~~L 774 (885)
+||||+++++|.+++... ...+++..+..++.|++.|++||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999998521 11135677889999999999999
Q ss_pred hccCCCCceecCCCCCcEEEcCCC--cEEEeeccCcccccCCCC---CcccCCCCCCccCCcccccC--CCCCCcchhHH
Q 047790 775 HHGFKPYIIHMDIKTSNILLNDYF--EAKVSDFGLARLISDCES---HVSTDTADTIGYVPSEYGQA--GRANERGDIYS 847 (885)
Q Consensus 775 H~~~~~~i~H~dlkp~Nil~~~~~--~vkl~Dfg~a~~~~~~~~---~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dvws 847 (885)
| +.+|+||||||+||+++.++ .+||+|||.+..+..... .......+++.|+|||++.+ ..++.++||||
T Consensus 185 H---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws 261 (345)
T 3hko_A 185 H---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261 (345)
T ss_dssp H---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred H---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence 9 89999999999999998766 899999999987643221 12334568999999999875 67889999999
Q ss_pred HHHHHHHHHhCCCCCCC
Q 047790 848 FGVILLELVTGKQPTGP 864 (885)
Q Consensus 848 lGvvl~elltg~~P~~~ 864 (885)
+||++|||++|+.||..
T Consensus 262 lG~il~el~~g~~pf~~ 278 (345)
T 3hko_A 262 AGVLLHLLLMGAVPFPG 278 (345)
T ss_dssp HHHHHHHHHHSSCSSCC
T ss_pred HHHHHHHHHHCCCCCCC
Confidence 99999999999999964
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-31 Score=281.40 Aligned_cols=199 Identities=29% Similarity=0.427 Sum_probs=169.9
Q ss_pred EEeecceecccCCceEEEEEeCC----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee-EEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK-LLV 735 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~-~lv 735 (885)
.|.++++||+|+||.||+|.+.+ +..||+|++..... ...+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 47788999999999999998543 22699999875433 2346788999999999999999999999766554 999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+.+++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..+....
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999876677899999999999999999999 8999999999999999999999999999998664422
Q ss_pred ---CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 816 ---SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 816 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
........++..|+|||.+.+..++.++||||+|+++|+|++|..||.
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~ 229 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTT
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCC
Confidence 122233457889999999999999999999999999999999666643
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=299.31 Aligned_cols=202 Identities=27% Similarity=0.304 Sum_probs=168.2
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC----
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG---- 729 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---- 729 (885)
+-+..+|++.+.||+|+||.||+|.+. +++.||+|++.... .....++.+|+++++.++||||+++++++...
T Consensus 22 ~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 101 (432)
T 3n9x_A 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK 101 (432)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred ceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCc
Confidence 345678999999999999999999875 47889999997543 22346788999999999999999999998765
Q ss_pred -CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 730 -EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 730 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
...|+||||++ ++|.+++... ..+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+|
T Consensus 102 ~~~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 102 FDELYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp CCCEEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred CCeEEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 56899999995 5999999754 45999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCCC---------------------cccCCCCCCccCCcccc-cCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 809 RLISDCESH---------------------VSTDTADTIGYVPSEYG-QAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 809 ~~~~~~~~~---------------------~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
+........ ......+|+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 876542211 12445789999999985 55679999999999999999998655543
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-31 Score=298.38 Aligned_cols=196 Identities=29% Similarity=0.448 Sum_probs=171.1
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC-eeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE-EKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e~ 738 (885)
...|++.+.||+|+||.||+|.+. ++.||+|+++... ..+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 456899999999999999999875 6789999997643 4578999999999999999999999987655 78999999
Q ss_pred ccCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 739 MVNGSLDDWLRNRAA-SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~-~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
+++|+|.+++..... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 999999999986543 3689999999999999999999 899999999999999999999999999999764321
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 343 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 390 (450)
T 1k9a_A 343 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 390 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS
T ss_pred -ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 122356788999999999999999999999999999998 99999754
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=291.26 Aligned_cols=203 Identities=27% Similarity=0.458 Sum_probs=173.4
Q ss_pred eeEEeecceecccCCceEEEEEe------CCCCeEEEEEecccc-cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQAT-GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~ 731 (885)
...|++.+.||+|+||.||+|++ .+++.||+|++.... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 35699999999999999999985 245679999997543 23456789999999999 89999999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCC----------------------CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCC
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAA----------------------SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKT 789 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~----------------------~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp 789 (885)
.++||||+++++|.+++..... .+++..+..++.|++.|++||| +.||+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence 9999999999999999986432 2788999999999999999999 89999999999
Q ss_pred CcEEEcCCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 790 SNILLNDYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 790 ~Nil~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+||+++.++.+||+|||.+......... ......+++.|+|||++.+..++.++||||||+++|+|+| |..||...
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 9999999999999999999876543222 2233456788999999999999999999999999999998 99999754
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-31 Score=287.50 Aligned_cols=202 Identities=28% Similarity=0.477 Sum_probs=168.5
Q ss_pred eeEEeecceecccCCceEEEEEeCC-----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
..+|++.+.||+|+||.||+|.+.. +..||+|++..... .....+.+|++++++++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 4568899999999999999997643 23599999875432 23457889999999999999999999999889999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999999999876677999999999999999999999 89999999999999999999999999999987654
Q ss_pred CCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 814 CESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 814 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.... ......++..|+|||++.+..++.++||||+|+++|||++ |+.||..
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~ 253 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE 253 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCccc
Confidence 2211 1122345778999999999999999999999999999999 9999964
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-31 Score=287.95 Aligned_cols=202 Identities=28% Similarity=0.476 Sum_probs=173.7
Q ss_pred eeEEeecceecccCCceEEEEEeC--------CCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP--------DQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVG 729 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~--------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 729 (885)
..+|++.+.||+|+||.||+|++. ++..||+|++..... ....++.+|+++++++ +||||+++++++..+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 356999999999999999999863 467899999975432 2346788999999999 899999999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL 794 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~ 794 (885)
+..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 99999999999999999998543 23889999999999999999999 8999999999999999
Q ss_pred cCCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 795 NDYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 795 ~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
+.++.+||+|||.+......... ......++..|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 262 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc
Confidence 99999999999999876543221 2233456788999999998889999999999999999999 9999864
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-31 Score=301.68 Aligned_cols=199 Identities=27% Similarity=0.369 Sum_probs=173.5
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.++||+|+||.||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 457999999999999999999875 68899999986532 334678899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc---CCCcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN---DYFEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~---~~~~vkl~Dfg~a~~~~~ 813 (885)
||+.+++|.+.+.... .+++..+..++.|++.|++||| +.||+||||||+||+++ .++.+||+|||.+..+..
T Consensus 101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999887654 4899999999999999999999 89999999999999995 456799999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ......+|+.|+|||++.+ .++.++||||+||++|+|++|+.||...
T Consensus 177 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~ 225 (486)
T 3mwu_A 177 NT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK 225 (486)
T ss_dssp C------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 22 2234578999999999876 5899999999999999999999999653
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-31 Score=278.63 Aligned_cols=196 Identities=23% Similarity=0.351 Sum_probs=170.6
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~l 734 (885)
...+|++.+.||+|+||.||+|++. ++.||+|++.... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 4567999999999999999999985 7889999987543 23346789999999999999999999999876 77899
Q ss_pred EEecccCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 735 VYEYMVNGSLDDWLRNRAA-SLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~-~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
||||+++++|.+++..... .+++..+..++.|++.|++||| +.+ ++||||||+||+++.++.++++|||++...
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 9999999999999986443 4899999999999999999999 889 999999999999999999999999887543
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCC---cchhHHHHHHHHHHHhCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANE---RGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. ....+|+.|+|||++.+..++. ++||||+|+++|||++|+.||..
T Consensus 164 ~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 213 (271)
T 3kmu_A 164 QS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213 (271)
T ss_dssp SC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTT
T ss_pred cc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 22 2346789999999998876554 79999999999999999999964
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-31 Score=279.01 Aligned_cols=203 Identities=24% Similarity=0.355 Sum_probs=176.6
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 357999999999999999999876 58899999986543 2335678899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC-C
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-S 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~-~ 816 (885)
|+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+..+.... .
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 99999999988743 45899999999999999999999 8999999999999999999999999999998764322 1
Q ss_pred CcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.......++..|+|||++.+..+ +.++||||+|+++|+|++|+.||....
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 212 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence 22334568999999999988775 778999999999999999999997543
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-31 Score=282.60 Aligned_cols=196 Identities=29% Similarity=0.443 Sum_probs=163.1
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++.+.||+|+||.||+|++. ++.||+|++.... ..+.+.+|++++++++||||+++++++. +..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 456999999999999999999875 6789999986432 3567899999999999999999999886 3478999999
Q ss_pred cCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc-EEEeeccCcccccCCCC
Q 047790 740 VNGSLDDWLRNRAA--SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE-AKVSDFGLARLISDCES 816 (885)
Q Consensus 740 ~~~sL~~~l~~~~~--~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~-vkl~Dfg~a~~~~~~~~ 816 (885)
++++|.+++..... .++...+..++.|+++|++|||.....||+||||||+||+++.++. +||+|||.+......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999985432 3788999999999999999999322289999999999999988776 799999998765431
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....++..|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 205 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTT
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchh
Confidence 2234689999999999999999999999999999999999999974
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=287.58 Aligned_cols=205 Identities=26% Similarity=0.411 Sum_probs=168.3
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCC-CCe----EEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPD-QKT----VAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~----valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
.+...+|++.++||+|+||.||+|.+.. ++. ||+|.+.... ......+.+|++++++++||||+++++++....
T Consensus 11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp ECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred ccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence 3445679999999999999999998643 444 4677665432 345678999999999999999999999998654
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.++++||+.+++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred -ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 78899999999999999877777999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 811 ISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+...... ......++..|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 223 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 6543222 2233446778999999999999999999999999999999 99999753
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-31 Score=284.80 Aligned_cols=201 Identities=23% Similarity=0.307 Sum_probs=170.4
Q ss_pred eeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe----CCeeEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV----GEEKLL 734 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~----~~~~~l 734 (885)
..+|++.+.||+|+||.||+|+. .+++.||+|++........+.+.+|+++++.++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46899999999999999999987 5689999999876555556788999999999999999999999863 347789
Q ss_pred EEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 735 VYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
||||+++++|.+++.. ....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||.+...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999875 3456899999999999999999999 899999999999999999999999999988765
Q ss_pred cCCCCC--------cccCCCCCCccCCcccccCCC---CCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 812 SDCESH--------VSTDTADTIGYVPSEYGQAGR---ANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 812 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
...... ......+++.|+|||++.+.. ++.++||||+|+++|+|++|+.||.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 247 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence 321100 011234689999999987654 6889999999999999999999985
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=292.65 Aligned_cols=202 Identities=32% Similarity=0.491 Sum_probs=162.3
Q ss_pred eEEeecceecccCCceEEEEEeCC----CCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeE-eCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCS-VGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~~l 734 (885)
..|++.++||+|+||.||+|.+.+ +..||+|.+.... ....+++.+|++++++++||||+++++++. .++..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 358889999999999999998642 2358899886533 234567899999999999999999999864 4567899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.+...
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999999877667899999999999999999999 899999999999999999999999999999866432
Q ss_pred CCC---cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 815 ESH---VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 815 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
... ......++..|+|||++.+..++.++|||||||++|||++ |.+||...
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~ 300 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 300 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC
Confidence 211 1223456788999999999999999999999999999999 67777543
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=290.71 Aligned_cols=196 Identities=24% Similarity=0.308 Sum_probs=165.2
Q ss_pred eeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe----------
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV---------- 728 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---------- 728 (885)
..+|++.++||+|+||.||+|.+ .+++.||+|++..... ...+|+++++.++||||+++++++..
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence 45799999999999999999986 4689999999865432 23479999999999999999998843
Q ss_pred ----------------------------CCeeEEEEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhcc
Q 047790 729 ----------------------------GEEKLLVYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHG 777 (885)
Q Consensus 729 ----------------------------~~~~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~ 777 (885)
..+.++||||++ ++|.+.+.. ....+++..+..++.|++.|++|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-- 158 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH-- 158 (383)
T ss_dssp ----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH--
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH--
Confidence 334789999997 487777653 4456999999999999999999999
Q ss_pred CCCCceecCCCCCcEEEc-CCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHH
Q 047790 778 FKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLEL 855 (885)
Q Consensus 778 ~~~~i~H~dlkp~Nil~~-~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~el 855 (885)
+.||+||||||+||+++ .++.+||+|||.|+.+.... ......+++.|+|||++.+. .++.++||||+||++|||
T Consensus 159 -~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 235 (383)
T 3eb0_A 159 -SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235 (383)
T ss_dssp -TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred -HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence 99999999999999997 68899999999998765432 22345689999999998775 489999999999999999
Q ss_pred HhCCCCCCCC
Q 047790 856 VTGKQPTGPE 865 (885)
Q Consensus 856 ltg~~P~~~~ 865 (885)
++|+.||.+.
T Consensus 236 l~g~~pf~~~ 245 (383)
T 3eb0_A 236 ILGKPLFSGE 245 (383)
T ss_dssp HHSSCSSCCS
T ss_pred HhCCCCCCCC
Confidence 9999999754
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=291.37 Aligned_cols=198 Identities=27% Similarity=0.352 Sum_probs=166.5
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCC----
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGE---- 730 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~---- 730 (885)
-+..+|++.+.||+|+||.||+|.+. +|+.||+|++..... ....++.+|+++++.++||||+++++++....
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 101 (367)
T 1cm8_A 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101 (367)
T ss_dssp CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence 34567999999999999999999874 589999999865332 23467889999999999999999999987653
Q ss_pred --eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 731 --EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 731 --~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
..|+||||+ +++|.+++.. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred CceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 459999999 8899999976 34899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 176 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 229 (367)
T 1cm8_A 176 RQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229 (367)
T ss_dssp EECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence 875432 234568999999999887 67899999999999999999999999754
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-31 Score=291.23 Aligned_cols=200 Identities=20% Similarity=0.241 Sum_probs=165.9
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccc-----------cHHHHHHHHHHhcccCCCCccceeeeeEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ-----------CDREFAAEMETLDMVKHQNLVQLLGYCSV 728 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~-----------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 728 (885)
..+|++.+.||+|+||.||+|.+.+++.||+|++...... ..+.+.+|++++++++||||+++++++..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 100 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH 100 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEe
Confidence 4679999999999999999999888999999998653321 12678999999999999999999999854
Q ss_pred -----CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEe
Q 047790 729 -----GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVS 803 (885)
Q Consensus 729 -----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~ 803 (885)
....++||||++ +++.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+
T Consensus 101 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~ 176 (362)
T 3pg1_A 101 FEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITIC 176 (362)
T ss_dssp CCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred ccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcCCCCEEEE
Confidence 236799999996 6898888876667999999999999999999999 8999999999999999999999999
Q ss_pred eccCcccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 804 DFGLARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 804 Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
|||.+...... .......+++.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 177 Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 237 (362)
T 3pg1_A 177 DFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237 (362)
T ss_dssp CTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC
Confidence 99999764432 22234568899999998877 67899999999999999999999999764
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=300.34 Aligned_cols=199 Identities=24% Similarity=0.384 Sum_probs=170.1
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.++||+|+||.||+|++. ++..||+|++.+.. ......+.+|+++++.++||||+++++++.+....|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 346999999999999999999876 58889999987543 334577899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC---CcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY---FEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~---~~vkl~Dfg~a~~~~~ 813 (885)
||+++++|.+.+..+. .+++..+..++.|++.|++||| +.||+||||||+||+++.. +.+||+|||++..+..
T Consensus 116 e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999999887554 4899999999999999999999 8999999999999999754 4599999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ......+|+.|+|||++. ..++.++||||+||++|+|++|+.||...
T Consensus 192 ~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~ 240 (494)
T 3lij_A 192 QK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQ 240 (494)
T ss_dssp TB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred Cc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCC
Confidence 32 233457999999999876 46899999999999999999999999753
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-31 Score=284.46 Aligned_cols=197 Identities=26% Similarity=0.398 Sum_probs=170.9
Q ss_pred EeecceecccCCceEEEEEeC-----CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeC--CeeEE
Q 047790 663 IVFENVIGGGGFRTAFKGTMP-----DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EEKLL 734 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~-----~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~l 734 (885)
|++.++||+|+||.||++.+. +++.||+|++..... .....+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 599999999999999988643 578899999976532 3346789999999999999999999999874 67899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++.... +++..+..++.|++.+++||| +.||+||||||+||+++.++.+||+|||.+..+...
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999997643 899999999999999999999 899999999999999999999999999999887543
Q ss_pred CCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... ......++..|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 239 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS 239 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence 221 22334577889999999999999999999999999999999999864
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-31 Score=303.03 Aligned_cols=200 Identities=25% Similarity=0.337 Sum_probs=176.2
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
+..+|++.++||+|+||.||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4467999999999999999999876 68999999986543 2346789999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccc
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLI 811 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~ 811 (885)
||||+.+++|.+++..+. .+++..+..++.|++.|++||| +.||+||||||+||++ +.++.+||+|||.+..+
T Consensus 104 v~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 999999999999987544 5899999999999999999999 8999999999999999 46788999999999876
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... ......+|+.|+|||++.+ .++.++||||+||++|+|++|+.||...
T Consensus 180 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~ 230 (484)
T 3nyv_A 180 EASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA 230 (484)
T ss_dssp CCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC
Confidence 5432 2233568999999999876 6899999999999999999999999754
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-31 Score=286.70 Aligned_cols=203 Identities=28% Similarity=0.428 Sum_probs=176.1
Q ss_pred eeeEEeecceecccCCceEEEEEe-----CCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeC--Ce
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-----PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVG--EE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-----~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~ 731 (885)
...+|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++... ..
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 445699999999999999999983 35889999999876555567899999999999999999999988654 36
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 79999999999999999877667999999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 812 SDCESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 812 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
...... ......++..|+|||++.+..++.++||||+|+++|+|++|..||..
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 250 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence 543221 12234567789999999988899999999999999999999998763
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-31 Score=282.21 Aligned_cols=201 Identities=43% Similarity=0.692 Sum_probs=172.8
Q ss_pred EeecceecccCCceEEEEEeCCCCeEEEEEecccc----cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT----GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
|..++.||+|+||.||+|.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 111 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111 (307)
T ss_dssp TTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred cccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEe
Confidence 45578999999999999987 67889999986532 22346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRN--RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~--~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
+++++|.+++.. ....+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+........
T Consensus 112 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 188 (307)
T 2nru_A 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188 (307)
T ss_dssp CTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS
T ss_pred cCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEcCCCcEEEeecccccccccccc
Confidence 999999999874 2345899999999999999999999 89999999999999999999999999999987654222
Q ss_pred C-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 047790 817 H-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFED 868 (885)
Q Consensus 817 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~ 868 (885)
. ......+++.|+|||++.+ .++.++||||+|+++|+|++|+.||......
T Consensus 189 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 240 (307)
T 2nru_A 189 TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP 240 (307)
T ss_dssp CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS
T ss_pred cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch
Confidence 2 2334568999999998765 4789999999999999999999999865443
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=287.09 Aligned_cols=202 Identities=26% Similarity=0.447 Sum_probs=174.0
Q ss_pred eeEEeecceecccCCceEEEEEeC------CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.+.||+|+||.||+|.+. .++.||+|++..... ....++.+|++++++++||||+++++++.+.+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 103 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 103 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence 457999999999999999999764 367899999975432 2345688999999999999999999999988999
Q ss_pred EEEEecccCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEe
Q 047790 733 LLVYEYMVNGSLDDWLRNRA---------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVS 803 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~---------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~ 803 (885)
++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeEEEC
Confidence 99999999999999987522 34689999999999999999999 8999999999999999999999999
Q ss_pred eccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 804 DFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 804 Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
|||.+......... ......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 243 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 243 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc
Confidence 99999866432211 2223346788999999999999999999999999999999 8999865
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=301.15 Aligned_cols=200 Identities=27% Similarity=0.378 Sum_probs=172.1
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccc-------------ccHHHHHHHHHHhcccCCCCccceee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATG-------------QCDREFAAEMETLDMVKHQNLVQLLG 724 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~-------------~~~~~~~~E~~~l~~l~~~~i~~~~~ 724 (885)
+..+|++.++||+|+||.||+|.+.. ++.||+|++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 34679999999999999999998764 78899999875431 23467889999999999999999999
Q ss_pred eeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC---cEE
Q 047790 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF---EAK 801 (885)
Q Consensus 725 ~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~---~vk 801 (885)
++.+....++||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999987654 4899999999999999999999 89999999999999998765 699
Q ss_pred EeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 802 VSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 802 l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
|+|||.+..+... .......+|+.|+|||++. ..++.++||||+||++|+|++|+.||...
T Consensus 190 l~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~ 250 (504)
T 3q5i_A 190 IVDFGLSSFFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ 250 (504)
T ss_dssp ECCCTTCEECCTT--SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEECCCCEEcCCC--CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999876543 2233457999999999987 46899999999999999999999999754
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=277.14 Aligned_cols=196 Identities=20% Similarity=0.287 Sum_probs=169.5
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+.++..+ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 356999999999999999999876 68999999987543 23346788899999998 899999999999999999999
Q ss_pred EecccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC----------------
Q 047790 736 YEYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---------------- 796 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---------------- 796 (885)
|||+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999753 245899999999999999999999 899999999999999984
Q ss_pred ---CCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 797 ---YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 797 ---~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
...++++|||.+...... ....++..|+|||++.+. .++.++||||+||++|+|++|..|+.
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 232 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSP-----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR 232 (289)
T ss_dssp ---CCCEEECCCTTCEETTCS-----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred cCCceEEEEcccccccccCCc-----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence 447999999999876542 223589999999998876 56689999999999999999987754
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-31 Score=295.47 Aligned_cols=200 Identities=23% Similarity=0.312 Sum_probs=162.5
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--------ccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--------QCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
..+|.+.+.||+|+||.||+|.+. +++.||+|++..... .....+.+|++++++++||||+++++++. .+
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~ 212 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AE 212 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SS
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence 356999999999999999999865 488999999875321 11224789999999999999999999975 45
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC---cEEEeeccC
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF---EAKVSDFGL 807 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~---~vkl~Dfg~ 807 (885)
..++||||+++++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++..+ .+||+|||.
T Consensus 213 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp EEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred ceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeeccc
Confidence 679999999999999988754 45899999999999999999999 89999999999999997544 599999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQA---GRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
++..... .......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||....
T Consensus 289 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~ 348 (419)
T 3i6u_A 289 SKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348 (419)
T ss_dssp TTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred ceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc
Confidence 9876542 22334578999999999864 567889999999999999999999997543
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=289.33 Aligned_cols=199 Identities=27% Similarity=0.302 Sum_probs=163.8
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCC----
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE---- 730 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~---- 730 (885)
.+..+|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+++++.++||||+++++++...+
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 45678999999999999999999865 58889999987533 223456889999999999999999999987654
Q ss_pred --eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 731 --EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 731 --~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
..++||||+++ ++.+.+.. .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred ccceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 78999999964 78888862 3889999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...... .......+|+.|+|||++.+..++.++||||+||++|+|++|+.||.+.
T Consensus 175 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 175 RTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 876432 2223457899999999999999999999999999999999999999754
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-31 Score=293.03 Aligned_cols=201 Identities=24% Similarity=0.268 Sum_probs=166.4
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC------
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE------ 730 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~------ 730 (885)
.....+|++.++||+|+||.||+|++.++..+|+|++...... ..+|+++++.++||||+++++++....
T Consensus 36 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp CEEEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred CcccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 3456789999999999999999999888778999988654322 236999999999999999999985433
Q ss_pred eeEEEEecccCCCHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-CCCcEEEeeccC
Q 047790 731 EKLLVYEYMVNGSLDDWLR--NRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGL 807 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~--~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-~~~~vkl~Dfg~ 807 (885)
..++||||++++.+..... .....+++..++.++.|++.|++||| +.||+||||||+||+++ .++.+||+|||.
T Consensus 112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 3789999997643333322 23456999999999999999999999 89999999999999999 789999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
|+.+..... .....+++.|+|||++.+. .++.++||||+||++|||++|+.||.+..
T Consensus 189 a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 246 (394)
T 4e7w_A 189 AKILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246 (394)
T ss_dssp CEECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 987654322 2345689999999998765 58999999999999999999999997543
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=277.25 Aligned_cols=195 Identities=26% Similarity=0.401 Sum_probs=171.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe----------
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV---------- 728 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---------- 728 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 456999999999999999999876 68999999986543 356789999999999999999998754
Q ss_pred ------CCeeEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEE
Q 047790 729 ------GEEKLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAK 801 (885)
Q Consensus 729 ------~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vk 801 (885)
....++||||+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.++
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEE
Confidence 34578999999999999999753 355899999999999999999999 89999999999999999999999
Q ss_pred EeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 802 VSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 802 l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
|+|||.+....... ......+++.|+|||++.+..++.++||||+|+++|+|++|..||.
T Consensus 163 l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 222 (284)
T 2a19_B 163 IGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 222 (284)
T ss_dssp ECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred ECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence 99999998765432 2234568999999999999999999999999999999999998864
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=284.18 Aligned_cols=201 Identities=26% Similarity=0.351 Sum_probs=157.5
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeE--------eC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCS--------VG 729 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~--------~~ 729 (885)
..+|++.++||+|+||.||+|++. +++.||+|++..........+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 458999999999999999999865 58899999986655555677889999999996 999999999984 23
Q ss_pred CeeEEEEecccCCCHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEcCCCcEEEeec
Q 047790 730 EEKLLVYEYMVNGSLDDWLRN--RAASLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLNDYFEAKVSDF 805 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~--~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~~~~~vkl~Df 805 (885)
...++||||+. |+|.+++.. ....+++..+..++.|++.|++||| +.+ |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 45789999995 699998864 3455999999999999999999999 888 999999999999999999999999
Q ss_pred cCcccccCCCCC-----------cccCCCCCCccCCcccc---cCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 806 GLARLISDCESH-----------VSTDTADTIGYVPSEYG---QAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 806 g~a~~~~~~~~~-----------~~~~~~~~~~y~aPE~~---~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
|.+......... ......+++.|+|||++ .+..++.++||||+||++|+|++|+.||..
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 255 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 999876542211 11134588999999998 566788999999999999999999999874
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-31 Score=306.66 Aligned_cols=201 Identities=32% Similarity=0.495 Sum_probs=175.2
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
...|++.++||+|+||.||+|.+.++..||+|+++... ...+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 34689999999999999999999888889999997644 335789999999999999999999999875 6789999999
Q ss_pred cCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++|+|.+++... ...+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++.+.......
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 420 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 420 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence 999999999753 345899999999999999999999 8999999999999999999999999999998765322122
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~ 468 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468 (535)
T ss_dssp TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 233446788999999999999999999999999999999 99999653
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=286.05 Aligned_cols=199 Identities=26% Similarity=0.367 Sum_probs=173.7
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--------cHHHHHHHHHHhccc-CCCCccceeeeeEeC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--------CDREFAAEMETLDMV-KHQNLVQLLGYCSVG 729 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--------~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 729 (885)
..+|++.+.||+|+||.||+|++. +|+.||+|++...... ..+.+.+|+++++++ +||||+++++++...
T Consensus 93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 172 (365)
T 2y7j_A 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172 (365)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence 356999999999999999999875 6999999998654311 134678899999999 799999999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
...++||||+++++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.++++|||.+.
T Consensus 173 ~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~ 248 (365)
T 2y7j_A 173 SFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSC 248 (365)
T ss_dssp SEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecCccc
Confidence 99999999999999999998543 4899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccC------CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQA------GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.+.... ......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||..
T Consensus 249 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 307 (365)
T 2y7j_A 249 HLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307 (365)
T ss_dssp ECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence 765432 2234578999999998763 3678899999999999999999999964
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-31 Score=291.31 Aligned_cols=197 Identities=14% Similarity=0.188 Sum_probs=169.7
Q ss_pred eeEEeecceecccCCceEEEEEeCC---------CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccc---------
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD---------QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ--------- 721 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~---------~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~--------- 721 (885)
..+|++.+.||+|+||.||+|++.. ++.||+|++... ..+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999998764 788999998653 46788999999999999887
Q ss_pred ------eeeeeEe-CCeeEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEE
Q 047790 722 ------LLGYCSV-GEEKLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNIL 793 (885)
Q Consensus 722 ------~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil 793 (885)
+++++.. +...++||||+ +++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEE
Confidence 5666665 67889999999 99999999864 355999999999999999999999 899999999999999
Q ss_pred EcCCC--cEEEeeccCcccccCCCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 794 LNDYF--EAKVSDFGLARLISDCESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 794 ~~~~~--~vkl~Dfg~a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
++.++ .+||+|||.+..+...... ......+++.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99988 8999999999876542211 113346899999999999999999999999999999999999999754
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-31 Score=286.61 Aligned_cols=202 Identities=30% Similarity=0.461 Sum_probs=169.8
Q ss_pred eeeEEeecceecccCCceEEEEEeCC-CCe--EEEEEecccc-cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPD-QKT--VAVKKLSQAT-GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~--valK~~~~~~-~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 733 (885)
...+|++.+.||+|+||.||+|++.. +.. +|+|.+.... ....+++.+|+++++++ +||||+++++++.+++..+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 34679999999999999999998654 554 4888886533 23345788999999999 8999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC
Q 047790 734 LVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~ 798 (885)
+||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCC
Confidence 9999999999999997543 35899999999999999999999 89999999999999999999
Q ss_pred cEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 799 EAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 799 ~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.+||+|||.+...... .......++..|+|||++.+..++.++||||+|+++|+|++ |+.||...
T Consensus 180 ~~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~ 245 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 245 (327)
T ss_dssp CEEECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eEEEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC
Confidence 9999999998753321 12223456788999999998889999999999999999998 99999643
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=278.13 Aligned_cols=194 Identities=26% Similarity=0.396 Sum_probs=166.2
Q ss_pred ceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccCCCHH
Q 047790 667 NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVNGSLD 745 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~ 745 (885)
..||+|+||.||+|.+. +++.||+|++........+.+.+|+++++.++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 39999999999999864 58889999997765555678999999999999999999999999999999999999999999
Q ss_pred HHHhhcC--CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-CCcEEEeeccCcccccCCCCCcccCC
Q 047790 746 DWLRNRA--ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-YFEAKVSDFGLARLISDCESHVSTDT 822 (885)
Q Consensus 746 ~~l~~~~--~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-~~~vkl~Dfg~a~~~~~~~~~~~~~~ 822 (885)
+++.... ...++..+..++.|++.|++||| +.||+||||||+||+++. ++.++|+|||.+....... ......
T Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~ 183 (295)
T 2clq_A 108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETF 183 (295)
T ss_dssp HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CCC
T ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC-Cccccc
Confidence 9998643 23668889999999999999999 899999999999999987 8899999999998765422 222345
Q ss_pred CCCCccCCcccccCCC--CCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 823 ADTIGYVPSEYGQAGR--ANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 823 ~~~~~y~aPE~~~~~~--~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.++..|+|||++.+.. ++.++||||+|+++|+|++|+.||..
T Consensus 184 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 227 (295)
T 2clq_A 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227 (295)
T ss_dssp CCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred CCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence 6899999999987643 78899999999999999999999863
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-31 Score=282.29 Aligned_cols=202 Identities=23% Similarity=0.288 Sum_probs=170.9
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEe--CCeeEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSV--GEEKLL 734 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~~l 734 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 356999999999999999999875 58899999987543 2234678899999999999999999998754 568899
Q ss_pred EEecccCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHhccCCCC-----ceecCCCCCcEEEcCCCcEEEeecc
Q 047790 735 VYEYMVNGSLDDWLRNR---AASLDWGKRCKIAYGAARGISFLHHGFKPY-----IIHMDIKTSNILLNDYFEAKVSDFG 806 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~-----i~H~dlkp~Nil~~~~~~vkl~Dfg 806 (885)
||||+++++|.+++... ...+++..+..++.|++.|++||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998752 334899999999999999999999 778 9999999999999999999999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+....... .......++..|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 219 (279)
T 2w5a_A 162 LARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF 219 (279)
T ss_dssp HHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc
Confidence 987765321 1122346889999999999999999999999999999999999999753
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-31 Score=296.57 Aligned_cols=199 Identities=25% Similarity=0.288 Sum_probs=172.0
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhccc------CCCCccceeeeeEeCC
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMV------KHQNLVQLLGYCSVGE 730 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l------~~~~i~~~~~~~~~~~ 730 (885)
.+..+|++.++||+|+||.||+|.+.. ++.||+|++.... .....+.+|+++++.+ .|+||+++++++....
T Consensus 94 ~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp EETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred cccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 445679999999999999999998654 8899999987543 2245677888888877 4679999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc--EEEeeccC
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE--AKVSDFGL 807 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~--vkl~Dfg~ 807 (885)
..++||||+. ++|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++. +||+|||.
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 9999999995 69999887543 45899999999999999999999 899999999999999998887 99999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+..... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 249 a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 249 SCYEHQ----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CEETTC----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecCC----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 976442 223457899999999999999999999999999999999999999754
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=293.80 Aligned_cols=198 Identities=10% Similarity=0.040 Sum_probs=153.8
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhccc--CCCCcccee-------eee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMV--KHQNLVQLL-------GYC 726 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l--~~~~i~~~~-------~~~ 726 (885)
...|++.+.||+|+||.||+|++. +++.||+|++..... .....+.+|+++++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345999999999999999999875 688999999986442 2345677885555544 699988755 333
Q ss_pred EeC-----------------CeeEEEEecccCCCHHHHHhhcCCCCCHHHH------HHHHHHHHHHHHHHhccCCCCce
Q 047790 727 SVG-----------------EEKLLVYEYMVNGSLDDWLRNRAASLDWGKR------CKIAYGAARGISFLHHGFKPYII 783 (885)
Q Consensus 727 ~~~-----------------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~------~~i~~~l~~~l~~LH~~~~~~i~ 783 (885)
... ...|+||||++ ++|.+++......++...+ ..++.|++.|++||| +.||+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 322 33799999998 8999999864444555555 678899999999999 89999
Q ss_pred ecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCC
Q 047790 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQP 861 (885)
Q Consensus 784 H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P 861 (885)
||||||+||+++.++.+||+|||.++..... .....+++.|+|||++.+ ..++.++||||+||++|||++|+.|
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999876431 113456699999999987 6789999999999999999999999
Q ss_pred CCCC
Q 047790 862 TGPE 865 (885)
Q Consensus 862 ~~~~ 865 (885)
|...
T Consensus 293 f~~~ 296 (371)
T 3q60_A 293 FGLV 296 (371)
T ss_dssp TTBC
T ss_pred CCCc
Confidence 9865
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=281.80 Aligned_cols=195 Identities=17% Similarity=0.250 Sum_probs=171.1
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEe--CCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSV--GEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~--~~~~~l 734 (885)
...+|++.++||+|+||.||+|++ .+++.||+|++... ....+.+|++++++++ ||||+++++++.. ....++
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 346799999999999999999986 46889999998643 3577899999999997 9999999999987 567899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-cEEEeeccCcccccC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-EAKVSDFGLARLISD 813 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-~vkl~Dfg~a~~~~~ 813 (885)
||||+.++++.+++.. +++..+..++.|++.|++||| +.||+||||||+||+++.++ .+||+|||.+..+..
T Consensus 111 v~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 9999999999998863 888999999999999999999 89999999999999999666 899999999987654
Q ss_pred CCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ......++..|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 184 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~ 234 (330)
T 3nsz_A 184 GQ--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 234 (330)
T ss_dssp TC--CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred CC--ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 32 2334578899999999887 67899999999999999999999999543
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-31 Score=290.09 Aligned_cols=202 Identities=24% Similarity=0.333 Sum_probs=172.0
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeC-----Cee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVG-----EEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~~ 732 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++..... .....+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999865 578899999975432 2346788999999999999999999998654 368
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
++||||++ ++|.+++... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+....
T Consensus 106 ~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99999996 5999988753 4899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCC--cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 813 DCESH--VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 813 ~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
..... ......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||.....
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 237 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh
Confidence 43222 1234578999999998654 5589999999999999999999999976543
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-31 Score=293.53 Aligned_cols=204 Identities=27% Similarity=0.306 Sum_probs=172.0
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC--------CCCccceeeeeE-
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK--------HQNLVQLLGYCS- 727 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~--------~~~i~~~~~~~~- 727 (885)
.+.++|++.++||+|+||.||+|++. +++.||+|++.... ...+.+.+|+++++.++ ||||+++++++.
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 34 LFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred hcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 34578999999999999999999865 58889999987542 23467889999999986 778999999887
Q ss_pred ---eCCeeEEEEecccCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCC----
Q 047790 728 ---VGEEKLLVYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYF---- 798 (885)
Q Consensus 728 ---~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~---- 798 (885)
.....++||||+ ++++.+.+.. ....+++..++.++.|++.|++||| ++ ||+||||||+||+++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhh
Confidence 456789999999 5566666554 3356999999999999999999999 87 999999999999998765
Q ss_pred ---------------------------------------------cEEEeeccCcccccCCCCCcccCCCCCCccCCccc
Q 047790 799 ---------------------------------------------EAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY 833 (885)
Q Consensus 799 ---------------------------------------------~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~ 833 (885)
.+||+|||.+...... .....+|..|+|||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChh
Confidence 7999999999876432 234568999999999
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC
Q 047790 834 GQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870 (885)
Q Consensus 834 ~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~~~ 870 (885)
+.+..++.++||||+||++|||++|+.||.+....+.
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 301 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEY 301 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSS
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCccccc
Confidence 9999999999999999999999999999987655443
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-30 Score=280.65 Aligned_cols=191 Identities=28% Similarity=0.449 Sum_probs=160.1
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcc--cCCCCccceeeeeEeC----Cee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDM--VKHQNLVQLLGYCSVG----EEK 732 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~~~~~~~~----~~~ 732 (885)
+..+|++.++||+|+||.||+|++. ++.||+|++.... ......|.+++.. ++||||+++++++... ...
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 110 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence 3467999999999999999999875 8899999986433 3444455555554 4899999999999876 688
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCC--------CceecCCCCCcEEEcCCCcEEEee
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP--------YIIHMDIKTSNILLNDYFEAKVSD 804 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~--------~i~H~dlkp~Nil~~~~~~vkl~D 804 (885)
++||||+++++|.++++.. .+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|
T Consensus 111 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 111 YLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 9999999999999999754 4899999999999999999999 77 999999999999999999999999
Q ss_pred ccCcccccCCCCCc---ccCCCCCCccCCcccccCCCCCCc------chhHHHHHHHHHHHhC
Q 047790 805 FGLARLISDCESHV---STDTADTIGYVPSEYGQAGRANER------GDIYSFGVILLELVTG 858 (885)
Q Consensus 805 fg~a~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~------~DvwslGvvl~elltg 858 (885)
||.+..+....... .....+|+.|+|||++.+.....+ +|||||||++|||++|
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence 99997765432221 124578999999999988776665 9999999999999999
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-31 Score=288.64 Aligned_cols=288 Identities=20% Similarity=0.202 Sum_probs=148.4
Q ss_pred CCCCCCCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCC
Q 047790 46 GWNKTTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLS 125 (885)
Q Consensus 46 ~w~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 125 (885)
.|.....+|.|.|+ |+. ++++++ .+|..+. ++|++|+|++|.+++..+..|+++++|++|+|++|+++
T Consensus 22 ~~~~~~~~C~~~~~-c~~--------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CKG--------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN 89 (353)
T ss_dssp -----CCEECTTSE-EEC--------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred CCCccCCCCCCCeE-eeC--------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccC
Confidence 35556788999988 743 233333 3454443 36666777766666555556666666666666666666
Q ss_pred CCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCC-cccCCCCCCccccccccc-cCCCCCcc
Q 047790 126 GSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIP-SRLGDLTQLQDLDLSDNL-LSGSLPVS 203 (885)
Q Consensus 126 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~-l~~~~p~~ 203 (885)
+..|..|+.+++|++|+|++|++++..+..|+.+++|++|+|++|++++..+ ..|.++++|++|++++|. +. .++..
T Consensus 90 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~ 168 (353)
T 2z80_A 90 TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT-KIQRK 168 (353)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC-EECTT
T ss_pred ccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc-ccCHH
Confidence 5555556666666666666666664333345556666666666666553222 245555555555555553 32 33333
Q ss_pred cccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccccccccc
Q 047790 204 LLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC 283 (885)
Q Consensus 204 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 283 (885)
.+.++++|++|++++|++ ++..|..+.
T Consensus 169 ~~~~l~~L~~L~l~~n~l-----------------------------------------------------~~~~~~~l~ 195 (353)
T 2z80_A 169 DFAGLTFLEELEIDASDL-----------------------------------------------------QSYEPKSLK 195 (353)
T ss_dssp TTTTCCEEEEEEEEETTC-----------------------------------------------------CEECTTTTT
T ss_pred HccCCCCCCEEECCCCCc-----------------------------------------------------CccCHHHHh
Confidence 344444444444444444 444444444
Q ss_pred CCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCC----CCceeEEeecCccccccCccccCcccc
Q 047790 284 NSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISE----LPLKVFDLQYNNFTGVIPVSLWNSENL 359 (885)
Q Consensus 284 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----~~L~~L~Ls~N~l~~~~p~~~~~l~~L 359 (885)
.+++|++|++++|.++..++..+..+++|++|++++|++++..+..+.. ..++.++++++.+++.
T Consensus 196 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~----------- 264 (353)
T 2z80_A 196 SIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE----------- 264 (353)
T ss_dssp TCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH-----------
T ss_pred ccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc-----------
Confidence 4445555555555554444444445566666666666665544333221 1355555555555431
Q ss_pred ceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccC
Q 047790 360 MEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDG 419 (885)
Q Consensus 360 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 419 (885)
.+. .+|..+..+++|++|+|++|+++...+..|..+++|++|+|++|.+++
T Consensus 265 --------~l~-~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 265 --------SLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp --------HHH-HHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred --------chh-hhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 111 123334455555555555555553322234555555555555555554
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-30 Score=276.97 Aligned_cols=200 Identities=27% Similarity=0.343 Sum_probs=174.1
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---------ccHHHHHHHHHHhcccC-CCCccceeeeeE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---------QCDREFAAEMETLDMVK-HQNLVQLLGYCS 727 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---------~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~ 727 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3467999999999999999999875 588999999865421 12356789999999996 999999999999
Q ss_pred eCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 728 VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 728 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
.+...++||||+++++|.+++..+. .+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||.
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 9999999999999999999998653 4899999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCccccc------CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQ------AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
+....... ......++..|+|||++. ...++.++||||+|+++|+|++|+.||..
T Consensus 171 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 231 (298)
T 1phk_A 171 SCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231 (298)
T ss_dssp CEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred hhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC
Confidence 98765422 223456899999999875 45688999999999999999999999864
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=293.95 Aligned_cols=203 Identities=22% Similarity=0.302 Sum_probs=173.8
Q ss_pred eeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccCC-CCccceeeeeEeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH-QNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~ 736 (885)
+..+|++.++||+|+||.||+|++ .+++.||+|++..... ..++..|+++++.++| +++..+..++...+..++||
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 446799999999999999999986 4588999998765432 2457889999999987 55666666777788899999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE---cCCCcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL---NDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~---~~~~~vkl~Dfg~a~~~~~ 813 (885)
||+ +++|.+++......+++..+..++.|++.|++||| +.+|+||||||+||++ +..+.+||+|||+++.+..
T Consensus 83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 999 99999999876667999999999999999999999 8999999999999999 5788999999999988765
Q ss_pred CCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 814 CESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 814 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
.... ......+|..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~ 218 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA 218 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence 3321 12245689999999999999999999999999999999999999976443
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=293.22 Aligned_cols=197 Identities=24% Similarity=0.268 Sum_probs=164.5
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeC------Ce
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVG------EE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~------~~ 731 (885)
....|++.++||+|+||.||+|++. +++.||+|++.... ....+|+++++.++||||+++++++... .+
T Consensus 52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 4557999999999999999999875 48999999986543 2234799999999999999999987432 24
Q ss_pred eEEEEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC-CcEEEeeccC
Q 047790 732 KLLVYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY-FEAKVSDFGL 807 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~-~~vkl~Dfg~ 807 (885)
.++||||+++ ++.+.+.. ....+++..++.++.|++.|++||| +.||+||||||+||+++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchh
Confidence 6799999975 66665542 3456999999999999999999999 9999999999999999954 6789999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
++.+..... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+.
T Consensus 204 a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~ 260 (420)
T 1j1b_A 204 AKQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260 (420)
T ss_dssp CEECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hhhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 987654222 2345789999999998765 7899999999999999999999999754
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-31 Score=289.31 Aligned_cols=199 Identities=29% Similarity=0.337 Sum_probs=155.5
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeC----
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVG---- 729 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---- 729 (885)
+-+..+|++.+.||+|+||.||+|.+. +++.||+|++.... .....++.+|+++++.++||||+++++++...
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 104 (367)
T 2fst_X 25 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE 104 (367)
T ss_dssp EEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred cCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc
Confidence 445678999999999999999999864 58899999986543 22346788999999999999999999998653
Q ss_pred --CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 730 --EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 730 --~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
...++|||++ +++|.+++.. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.
T Consensus 105 ~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 105 EFNDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp GCCCCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC---
T ss_pred cCCeEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 5679999999 7899998875 45899999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 233 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9775432 234568999999999887 67899999999999999999999999754
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=283.27 Aligned_cols=200 Identities=23% Similarity=0.350 Sum_probs=170.8
Q ss_pred eEEeec-ceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFE-NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~-~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 735 (885)
.+|.+. +.||+|+||.||+|.+. +++.||+|++.... ......+.+|+++++.+. ||+|+++++++..++..++|
T Consensus 28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv 107 (327)
T 3lm5_A 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI 107 (327)
T ss_dssp HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence 457776 89999999999999876 58999999987543 234578889999999995 69999999999999999999
Q ss_pred EecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEEEeeccCcccc
Q 047790 736 YEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAKVSDFGLARLI 811 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vkl~Dfg~a~~~ 811 (885)
|||+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++. .+.+||+|||.+...
T Consensus 108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~ 184 (327)
T 3lm5_A 108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184 (327)
T ss_dssp EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC
T ss_pred EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCcccccc
Confidence 9999999999988642 355899999999999999999999 899999999999999987 789999999999876
Q ss_pred cCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 185 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 236 (327)
T 3lm5_A 185 GHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE 236 (327)
T ss_dssp -----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 5422 223457899999999999999999999999999999999999999643
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=279.14 Aligned_cols=199 Identities=26% Similarity=0.435 Sum_probs=168.1
Q ss_pred eEEeecc-eecccCCceEEEEEeC---CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 661 AIIVFEN-VIGGGGFRTAFKGTMP---DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~-~lG~G~~g~vy~a~~~---~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+|++.+ .||+|+||.||+|.+. .++.||+|++...... ..+.+.+|++++++++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4688888 9999999999999542 3678999999764322 246789999999999999999999999 5677899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+......
T Consensus 95 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp EEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 99999999999999864 34899999999999999999999 899999999999999999999999999999876543
Q ss_pred CCCc--ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 815 ESHV--STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 815 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.... .....++..|+|||++.+..++.++||||+|+++|+|++ |+.||..
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 223 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 3221 122345688999999998889999999999999999999 9999975
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=277.75 Aligned_cols=200 Identities=22% Similarity=0.269 Sum_probs=157.4
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc-c-HHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ-C-DREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~-~-~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
...+|++.+.||+|+||.||+|++. +++.||+|++...... . .+.+.++...++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 3467999999999999999999874 6889999999754322 1 23344555557888999999999999999999999
Q ss_pred EecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 736 YEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
|||+++ ++.+++.. ....+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|||.+...
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999964 88777653 4556999999999999999999999 77 9999999999999999999999999999876
Q ss_pred cCCCCCcccCCCCCCccCCcccc----cCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYG----QAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.... ......+++.|+|||++ .+..++.++||||+|+++|+|++|+.||..
T Consensus 161 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (290)
T 3fme_A 161 VDDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred cccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence 5422 22334689999999996 556788999999999999999999999964
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=278.18 Aligned_cols=202 Identities=22% Similarity=0.327 Sum_probs=168.8
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc----cccHHHHHHHHHHhcccCCCCccceeeeeE--eCCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT----GQCDREFAAEMETLDMVKHQNLVQLLGYCS--VGEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~--~~~~ 731 (885)
+.++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3467999999999999999999875 58899999997543 233567899999999999999999999984 4567
Q ss_pred eEEEEecccCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 732 KLLVYEYMVNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.++||||++++ +.+++.. ....+++..+..++.|++.|++||| +.||+||||||+||+++.++.++++|||.+..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999776 7776664 3456899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCC-CCcccCCCCCCccCCcccccCCCC--CCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 811 ISDCE-SHVSTDTADTIGYVPSEYGQAGRA--NERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 811 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~--~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..... ........++..|+|||+..+... +.++||||+|+++|+|++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence 65322 222334568999999999887543 7799999999999999999999975
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-31 Score=286.73 Aligned_cols=198 Identities=28% Similarity=0.484 Sum_probs=161.3
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHH--HHHHHhcccCCCCccceeeeeEe-----CCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFA--AEMETLDMVKHQNLVQLLGYCSV-----GEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~--~E~~~l~~l~~~~i~~~~~~~~~-----~~~ 731 (885)
...+|++.+.||+|+||.||+|+. +++.||+|++.... ...+. .|+..+..++||||+++++.+.. ...
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 456799999999999999999976 67899999986543 23333 44444556899999999985532 235
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCC---------CceecCCCCCcEEEcCCCcEEE
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP---------YIIHMDIKTSNILLNDYFEAKV 802 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~---------~i~H~dlkp~Nil~~~~~~vkl 802 (885)
.++||||+++++|.+++.... .++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEE
Confidence 789999999999999997644 588899999999999999999 88 9999999999999999999999
Q ss_pred eeccCcccccCCC-------CCcccCCCCCCccCCcccccC-------CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 803 SDFGLARLISDCE-------SHVSTDTADTIGYVPSEYGQA-------GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 803 ~Dfg~a~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+|||.+..+.... ........+|..|+|||++.+ ..++.++|||||||++|||++|..||...
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 238 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence 9999998765321 112224468999999999887 35567899999999999999998877543
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=291.56 Aligned_cols=199 Identities=23% Similarity=0.333 Sum_probs=155.5
Q ss_pred EEee-cceecccCCceEEEEEeC---CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe--CCeeEEE
Q 047790 662 IIVF-ENVIGGGGFRTAFKGTMP---DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV--GEEKLLV 735 (885)
Q Consensus 662 ~~~~-~~~lG~G~~g~vy~a~~~---~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 735 (885)
.|++ +++||+|+||.||+|++. +++.||+|++.... ....+.+|++++++++||||+++++++.. +...++|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 4676 568999999999999865 47889999987543 24578899999999999999999999954 6788999
Q ss_pred EecccCCCHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE----cCCCcEEEe
Q 047790 736 YEYMVNGSLDDWLRNR--------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL----NDYFEAKVS 803 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~--------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~----~~~~~vkl~ 803 (885)
|||++ +++.+++... ...+++..++.++.|++.|++||| +.||+||||||+||++ +..+.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99995 5888877531 124899999999999999999999 8999999999999999 677899999
Q ss_pred eccCcccccCCCC--CcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 804 DFGLARLISDCES--HVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 804 Dfg~a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
|||.|+.+..... .......+|+.|+|||++.+. .++.++||||+||++|+|++|+.||....
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 9999987654221 222345689999999998874 58999999999999999999999997544
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-31 Score=282.79 Aligned_cols=203 Identities=25% Similarity=0.375 Sum_probs=157.5
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++.... .....++.+|++++++++||||+++++++..++..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 3467999999999999999999865 58899999986543 233467889999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhh-------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 737 EYMVNGSLDDWLRN-------RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 737 e~~~~~sL~~~l~~-------~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
||+++++|.+++.. ....+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||.+.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999874 2345899999999999999999999 8999999999999999999999999999987
Q ss_pred cccCCCC----CcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 810 LISDCES----HVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 810 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
....... .......+++.|+|||++.+ ..++.++||||+|+++|+|++|+.||..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 229 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 6643211 11233468999999999876 5689999999999999999999999975
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=306.07 Aligned_cols=196 Identities=24% Similarity=0.418 Sum_probs=166.2
Q ss_pred cceecccCCceEEEEEeC---CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 666 ENVIGGGGFRTAFKGTMP---DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~---~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
...||+|+||.||+|.+. ++..||+|+++... ....+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 341 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~ 419 (613)
T 2ozo_A 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGG 419 (613)
T ss_dssp EEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCC
Confidence 338999999999999764 45679999997643 3356789999999999999999999999875 568999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc--
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS-- 819 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~-- 819 (885)
|+|.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.+........
T Consensus 420 g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 496 (613)
T 2ozo_A 420 GPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496 (613)
T ss_dssp CBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred CcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence 9999999876667999999999999999999999 89999999999999999999999999999987654322221
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
....++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 543 (613)
T 2ozo_A 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543 (613)
T ss_dssp -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 12234678999999999999999999999999999998 99999754
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=276.01 Aligned_cols=197 Identities=28% Similarity=0.439 Sum_probs=164.4
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeC-CeeEEEEe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVG-EEKLLVYE 737 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-~~~~lv~e 737 (885)
....|++.+.||+|+||.||+|++. ++.||+|++.... ..+.+.+|++++++++||||+++++++... +..++|||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 4567999999999999999999874 7889999987543 456789999999999999999999986544 57899999
Q ss_pred cccCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 738 YMVNGSLDDWLRNRAA-SLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~-~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
|+++++|.+++..... .+++..+..++.|++.|++||| +.|++||||||+||+++.++.++|+|||.+......
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 9999999999975432 2788999999999999999999 899999999999999999999999999998765432
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.....++..|+|||++.+..++.++||||+|+++|+|++ |+.||...
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 218 (278)
T 1byg_A 171 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 218 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred --ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence 122356788999999999999999999999999999998 99998753
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=280.94 Aligned_cols=200 Identities=24% Similarity=0.381 Sum_probs=166.2
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEe------CCe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSV------GEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~------~~~ 731 (885)
.++|++.+.||+|+||.||+|++. +++.||+|++.... .....+.+|+++++++ +||||+++++++.. ...
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 456999999999999999999874 68899999986543 3357888999999999 79999999999876 467
Q ss_pred eEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.++||||+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 89999999999999999853 345899999999999999999999 89999999999999999999999999999877
Q ss_pred ccCCCCCcccCCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..... .......++..|+|||++. +..++.++||||+||++|+|++|+.||..
T Consensus 179 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 236 (326)
T 2x7f_A 179 LDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236 (326)
T ss_dssp -------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 64321 1223446899999999987 56788999999999999999999999964
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-31 Score=284.37 Aligned_cols=203 Identities=27% Similarity=0.414 Sum_probs=173.2
Q ss_pred eeEEeecceecccCCceEEEEEe------CCCCeEEEEEecccccc-cHHHHHHHHHHhccc-CCCCccceeeeeEeCC-
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATGQ-CDREFAAEMETLDMV-KHQNLVQLLGYCSVGE- 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~- 730 (885)
..+|++.+.||+|+||.||+|++ .+++.||+|++...... ..+.+.+|+++++++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 45799999999999999999974 34678999999764432 345788999999999 6899999999987654
Q ss_pred eeEEEEecccCCCHHHHHhhcCCC---------------CCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAAS---------------LDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~---------------~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~ 795 (885)
..++||||+++++|.+++...... +++..+..++.|++.|++||| +.||+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEEC
Confidence 589999999999999999864432 789999999999999999999 89999999999999999
Q ss_pred CCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 796 DYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 796 ~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.++.+||+|||.+......... ......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||...
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 9999999999999876543222 2233456789999999999999999999999999999998 99999754
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=280.09 Aligned_cols=200 Identities=23% Similarity=0.315 Sum_probs=167.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--------ccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--------QCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
..+|++.+.||+|+||.||+|.+. +++.||+|++..... .....+.+|++++++++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 357999999999999999999875 478899999865321 12235789999999999999999999987654
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc---EEEeeccC
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE---AKVSDFGL 807 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~---vkl~Dfg~ 807 (885)
.++||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++. +||+|||.
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 89999999999999988754 45899999999999999999999 899999999999999986654 99999999
Q ss_pred cccccCCCCCcccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
+...... .......+++.|+|||++. ...++.++||||+||++|+|++|+.||....
T Consensus 164 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 223 (322)
T 2ycf_A 164 SKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223 (322)
T ss_dssp CEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT
T ss_pred ceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 9876432 1122345899999999863 5678899999999999999999999997543
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=284.83 Aligned_cols=199 Identities=25% Similarity=0.332 Sum_probs=168.5
Q ss_pred ceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc--cHHHHHHHHHHhcccCCCCccceeeeeEeCCee
Q 047790 656 SVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ--CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 656 ~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
.+-+..+|++.+.||+|+||.||+|.+. +++.||+|++...... ...++.+|+++++.++||||+++++++...+..
T Consensus 37 ~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 116 (371)
T 4exu_A 37 AWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL 116 (371)
T ss_dssp EEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSS
T ss_pred eecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCc
Confidence 3556678999999999999999999865 5889999999764322 246788999999999999999999999876554
Q ss_pred ------EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeecc
Q 047790 733 ------LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFG 806 (885)
Q Consensus 733 ------~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg 806 (885)
++||||+. ++|.+++. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||
T Consensus 117 ~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 117 RNFYDFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp TTCCCCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ccceeEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999996 58888774 33899999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+...... .....+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 190 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 245 (371)
T 4exu_A 190 LARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245 (371)
T ss_dssp CC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 99865432 233567999999999887 67899999999999999999999999754
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=279.51 Aligned_cols=203 Identities=22% Similarity=0.401 Sum_probs=162.0
Q ss_pred eeEEeecceecccCCceEEEEEeCC----CCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCC---
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGE--- 730 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--- 730 (885)
..+|.+.+.||+|+||.||+|.... ++.||+|++..... ...+.+.+|++++++++||||+++++++....
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 3569999999999999999997542 44799999875432 23457889999999999999999999987654
Q ss_pred --eeEEEEecccCCCHHHHHhh-----cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEe
Q 047790 731 --EKLLVYEYMVNGSLDDWLRN-----RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVS 803 (885)
Q Consensus 731 --~~~lv~e~~~~~sL~~~l~~-----~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~ 803 (885)
..++||||+++++|.+++.. ....+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEEe
Confidence 34999999999999999852 3355899999999999999999999 9999999999999999999999999
Q ss_pred eccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 804 DFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 804 Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
|||.+..+..... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||...
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 253 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV 253 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 9999987654322 12233456788999999999999999999999999999999 88898653
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=280.58 Aligned_cols=204 Identities=24% Similarity=0.323 Sum_probs=166.2
Q ss_pred eeeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeE--------
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCS-------- 727 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-------- 727 (885)
..+..+|++.+.||+|+||.||+|.+.. ++.||+|++........+++.+|++++++++||||+++++++.
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 7 FDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp EEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 3445689999999999999999998765 8899999987665555678899999999999999999999873
Q ss_pred ------eCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-CCCcE
Q 047790 728 ------VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-DYFEA 800 (885)
Q Consensus 728 ------~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-~~~~v 800 (885)
+....++||||++ ++|.+++.. ..+++..+..++.|++.|++||| +.||+||||||+||+++ +++.+
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEE
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeE
Confidence 3467899999997 599999874 34899999999999999999999 89999999999999997 56789
Q ss_pred EEeeccCcccccCCCC--CcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 801 KVSDFGLARLISDCES--HVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
||+|||.+........ .......++..|+|||++.+ ..++.++||||+|+++|||++|+.||....
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 229 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC
Confidence 9999999987643211 12233456889999998765 678999999999999999999999997543
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=279.03 Aligned_cols=202 Identities=26% Similarity=0.381 Sum_probs=164.2
Q ss_pred eeeEEeecceecccCCceEEEEEeC--CCC--eEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP--DQK--TVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~--~~~--~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 731 (885)
...+|++.+.||+|+||.||+|++. +++ .||+|+++... ....+.+.+|++++++++||||+++++++..+.
T Consensus 16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence 3467999999999999999999853 233 58999887542 233467889999999999999999999998654
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 88999999999999999876566899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 812 SDCESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 812 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
...... ......++..|+|||+..+..++.++||||+|+++|+|++ |+.||..
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 227 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 543222 2223456778999999998889999999999999999999 9999964
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=284.40 Aligned_cols=202 Identities=27% Similarity=0.435 Sum_probs=173.5
Q ss_pred eEEeecceecccCCceEEEEEeCC------CCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~------~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
..|++.+.||+|+||.||+|.+.. .+.||+|.+..... ...+.+.+|+++++++ +||||+++++++..++..
T Consensus 46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 125 (333)
T 2i1m_A 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV 125 (333)
T ss_dssp TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence 469999999999999999998643 24799999876432 3346788999999999 899999999999999999
Q ss_pred EEEEecccCCCHHHHHhhc-------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc
Q 047790 733 LLVYEYMVNGSLDDWLRNR-------------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE 799 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~-------------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~ 799 (885)
++||||+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.
T Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~ 202 (333)
T 2i1m_A 126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHV 202 (333)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGGGE
T ss_pred EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCCCe
Confidence 9999999999999998753 234799999999999999999999 899999999999999999999
Q ss_pred EEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 800 AKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 800 vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
+||+|||.+......... ......++..|+|||++.+..++.++||||+|+++|+|++ |..||...
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 270 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence 999999999876443222 2233446788999999999999999999999999999999 99998754
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-30 Score=276.53 Aligned_cols=201 Identities=24% Similarity=0.363 Sum_probs=167.4
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--cccHHHHHHHHHHhcccC--CCCccceeeeeEeCCeeEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVK--HQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~--~~~i~~~~~~~~~~~~~~l 734 (885)
...+|++.+.||+|+||.||+|.+.+++.||+|++.... ......+.+|++++++++ ||||+++++++..++..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 346799999999999999999999889999999986543 223467889999999997 5999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||| +.+++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||++++ +.+||+|||.+..+...
T Consensus 106 v~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred EEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence 999 55889999998643 5899999999999999999999 899999999999999975 78999999999876543
Q ss_pred CCC-cccCCCCCCccCCcccccC-----------CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 815 ESH-VSTDTADTIGYVPSEYGQA-----------GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 815 ~~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... ......+++.|+|||++.+ ..++.++||||+|+++|+|++|+.||...
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhH
Confidence 221 2234568999999999876 46788999999999999999999999753
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-30 Score=280.60 Aligned_cols=199 Identities=23% Similarity=0.316 Sum_probs=172.4
Q ss_pred eeeeEEeecceecccCCceEEEEEe--CCCCeEEEEEecccccccHHHHHHHHHHhcccCCC------CccceeeeeEeC
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTM--PDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQ------NLVQLLGYCSVG 729 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~--~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~------~i~~~~~~~~~~ 729 (885)
++..+|++.+.||+|+||.||+|.+ .+++.||+|++.... ...+.+.+|+++++.++|+ +++++++++...
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 4456899999999999999999986 358889999986543 2346788899999988765 499999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC------------
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND------------ 796 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~------------ 796 (885)
+..++||||+ ++++.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----
T ss_pred CcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccc
Confidence 9999999999 889999987643 35889999999999999999999 899999999999999987
Q ss_pred -------CCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 797 -------YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 797 -------~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
++.+||+|||.+..... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDE----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTS----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccCCCceEeeCcccccCcc----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 56799999999976443 223456899999999999999999999999999999999999999754
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=282.30 Aligned_cols=205 Identities=28% Similarity=0.406 Sum_probs=170.4
Q ss_pred eeeeEEeecceecccCCceEEEEEe------CCCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
+...+|++.+.||+|+||.||+|++ .+++.||+|++.... .....++.+|++++++++||||+++++++..+.
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 3456799999999999999999984 247789999997543 234567889999999999999999999999988
Q ss_pred eeEEEEecccCCCHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEE
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRA------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAK 801 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vk 801 (885)
..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++. ...++
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEE
Confidence 9999999999999999998643 34889999999999999999999 899999999999999984 44699
Q ss_pred EeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 802 VSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 802 l~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
|+|||.+........ .......++..|+|||++.+..++.++||||+|+++|+|++ |+.||...
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 249 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 249 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc
Confidence 999999876543221 12233457889999999999999999999999999999998 99998643
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=272.36 Aligned_cols=193 Identities=25% Similarity=0.368 Sum_probs=161.9
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe-----------
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV----------- 728 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~----------- 728 (885)
.+|++.+.||+|+||.||+|++. +++.||+|++.... .....+.+|++++++++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 46999999999999999999875 68999999986532 334678899999999999999999998754
Q ss_pred --CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeecc
Q 047790 729 --GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFG 806 (885)
Q Consensus 729 --~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg 806 (885)
....++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.++|+|||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence 35679999999999999999876666888999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCC-------------CCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHh
Q 047790 807 LARLISDCE-------------SHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVT 857 (885)
Q Consensus 807 ~a~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~ellt 857 (885)
.+....... ........++..|+|||++.+. .++.++||||+||++|+|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 988764321 1112334588999999998865 68999999999999999998
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-33 Score=327.49 Aligned_cols=432 Identities=14% Similarity=0.107 Sum_probs=269.2
Q ss_pred CCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcc---cCcCCcCcc------------CcCCCC
Q 047790 51 TRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLL---FGQLSPQVS------------NLKRLK 115 (885)
Q Consensus 51 ~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l---~~~~~~~~~------------~l~~L~ 115 (885)
.-|++|.++.+...+.. .+.. ......+..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 39 ~vck~W~~~~~~~~~~l--~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 39 LVCRRWFKIDSETREHV--TMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp TSCHHHHHHHHHHCCEE--EESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHhHHHHHhhhccccEE--EEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 34668999876544322 2222 22233344567889999999988643 244555544 789999
Q ss_pred EEeccCCcCCCCCCcccccc--ccccEeeeeccC-CCC-CCCccccCCccCceEEccCCcCCcc----CCcccCCCCCCc
Q 047790 116 MLSVGENQLSGSIPSQLGLL--TRLETISLRSNS-FTG-EMPSELGDIKQLKSLDFSGNGLNGT----IPSRLGDLTQLQ 187 (885)
Q Consensus 116 ~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~N~-l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~ 187 (885)
+|+|++|.+++..+..++.. ++|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+..+++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 99999999987777777664 459999999987 221 1223334789999999999998765 333456789999
Q ss_pred cccccccccCCCCCc----ccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCC
Q 047790 188 DLDLSDNLLSGSLPV----SLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSM 263 (885)
Q Consensus 188 ~L~Ls~N~l~~~~p~----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~ 263 (885)
+|++++|.+++ +.. ..+.++++|++|++++|.+.+ +|..+.++++|++|.++.... ....+..+..+..+++
T Consensus 196 ~L~L~~n~~~~-~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~--~~~~~~~~~~l~~~~~ 271 (592)
T 3ogk_B 196 VLNFYMTEFAK-ISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNE--DIGMPEKYMNLVFPRK 271 (592)
T ss_dssp EEECTTCCCSS-CCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCC--CTTCTTSSSCCCCCTT
T ss_pred EEEeeccCCCc-cCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccccc--ccchHHHHHHhhcccc
Confidence 99999999872 221 235678999999999999985 678888899999999864211 1112344566778889
Q ss_pred CcEEEecCCcccccccccccCCCCCcEEEccCCCCcCccc-ccccccCCcceeeccccccCC-CCCcccCCC-CceeEEe
Q 047790 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE-DVFDRCTNLSELVLVNNRISG-SIPEYISEL-PLKVFDL 340 (885)
Q Consensus 264 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~-~L~~L~L 340 (885)
|+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|++|+++ +.+.. .++...... .|++|++
T Consensus 272 L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L 349 (592)
T 3ogk_B 272 LCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRI 349 (592)
T ss_dssp CCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEE
T ss_pred ccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEe
Confidence 999999886443 677778888889999999888765443 346778888888888 43332 222222222 5777777
Q ss_pred e-----------cCccccccCcc-ccCccccceeecccccccCCCcccccc-cccccEEEcc----CCccccc-----Cc
Q 047790 341 Q-----------YNNFTGVIPVS-LWNSENLMEFNAASNLLEGSLSWEISN-AVALEKLDLS----SNMLTRQ-----IP 398 (885)
Q Consensus 341 s-----------~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~L~Ls----~N~l~~~-----~p 398 (885)
+ .|.+++..... +..+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++
T Consensus 350 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~ 429 (592)
T 3ogk_B 350 ERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVR 429 (592)
T ss_dssp ECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHH
T ss_pred ecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHH
Confidence 7 34555432222 234556666666666655544444443 5556666664 4555542 22
Q ss_pred ccccccccccceecccc--cccCcCCCccC-CCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEe
Q 047790 399 KKIGNLTNIQILKLNSN--FFDGIIPMEFG-DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLN 475 (885)
Q Consensus 399 ~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~ 475 (885)
..+.++++|+.|++++| .+++..+..+. .+++|++|++++|++++. .++..+..+++|+.|+
T Consensus 430 ~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~---------------~~~~~~~~~~~L~~L~ 494 (592)
T 3ogk_B 430 SLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE---------------GLMEFSRGCPNLQKLE 494 (592)
T ss_dssp HHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHH---------------HHHHHHTCCTTCCEEE
T ss_pred HHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHH---------------HHHHHHhcCcccCeee
Confidence 33445556666666532 24433333332 245566666655555311 2333445556666666
Q ss_pred ccCccccCC-CCCCcccccccceeeeccccce
Q 047790 476 LFGNLLTGS-IPPEFGDSLKVQGLYLGHNQLT 506 (885)
Q Consensus 476 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~ 506 (885)
+++|.+++. ++..+..+++|+.|++++|+++
T Consensus 495 l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 495 MRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp EESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred ccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 666665433 2222344556666666666655
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-30 Score=302.47 Aligned_cols=202 Identities=25% Similarity=0.384 Sum_probs=170.7
Q ss_pred eeEEeecceecccCCceEEEEEeCC----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
..+|++.+.||+|+||.||+|.+.. +..||+|++..... ...+.+.+|+.++++++||||+++++++. ++..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 4569999999999999999998643 45689998865432 23467889999999999999999999985 466899
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++|+|.+++..+...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999999999876667999999999999999999999 899999999999999999999999999999876543
Q ss_pred CCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.........+++.|+|||++.+..++.++||||+||++|||++ |..||...
T Consensus 545 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 596 (656)
T 2j0j_A 545 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596 (656)
T ss_dssp ---------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence 3333333456789999999999999999999999999999997 99998753
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-30 Score=277.79 Aligned_cols=200 Identities=26% Similarity=0.335 Sum_probs=169.9
Q ss_pred eeEEeecceecccCCceEEEEEe--CCCCeEEEEEeccccc--ccHHHHHHHHHHhccc---CCCCccceeeeeE-----
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM--PDQKTVAVKKLSQATG--QCDREFAAEMETLDMV---KHQNLVQLLGYCS----- 727 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~--~~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l---~~~~i~~~~~~~~----- 727 (885)
..+|++.+.||+|+||.||+|++ .+++.||+|++..... .....+.+|+++++.+ +||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 35799999999999999999987 3578899999865432 1223566778777766 8999999999986
Q ss_pred eCCeeEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeecc
Q 047790 728 VGEEKLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFG 806 (885)
Q Consensus 728 ~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg 806 (885)
.....++||||++ ++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Dfg 165 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFG 165 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecCc
Confidence 4567899999997 69999987643 34899999999999999999999 8999999999999999999999999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+...... .......++..|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 166 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (326)
T 1blx_A 166 LARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS 222 (326)
T ss_dssp SCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 99776532 2233456899999999999999999999999999999999999999754
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-30 Score=283.15 Aligned_cols=286 Identities=20% Similarity=0.231 Sum_probs=194.5
Q ss_pred CCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeE
Q 047790 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVF 338 (885)
Q Consensus 260 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L 338 (885)
.++.....++++|.++ .+|..+. ++|++|++++|.+++.++..|..+++|++|++++|++++..|..+..+ .|++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 4555666888888888 5676554 488888888888888877788888888888888888887766666665 57777
Q ss_pred EeecCccccccCccccCccccceeecccccccCCCc-ccccccccccEEEccCC-cccccCcccccccccccceeccccc
Q 047790 339 DLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLS-WEISNAVALEKLDLSSN-MLTRQIPKKIGNLTNIQILKLNSNF 416 (885)
Q Consensus 339 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~ 416 (885)
++++|++++..+..+..+++|++|++++|++.+..+ ..|..+++|++|++++| .++...+..|..+++|+.|++++|.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 777777776555556666666666666666665444 35666666666666666 3555555566666666666666666
Q ss_pred ccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchh-cccCCCCCEEeccCccccCCCCCCccccccc
Q 047790 417 FDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGS-LSRLTNLTTLNLFGNLLTGSIPPEFGDSLKV 495 (885)
Q Consensus 417 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 495 (885)
+++..|..+..+++|++|++++|+++ .+|.. +..+++|+.|++++|++++..+..+.
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~-----------------~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~----- 243 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHI-----------------LLLEIFVDVTSSVECLELRDTDLDTFHFSELS----- 243 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCST-----------------THHHHHHHHTTTEEEEEEESCBCTTCCCC--------
T ss_pred cCccCHHHHhccccCCeecCCCCccc-----------------cchhhhhhhcccccEEECCCCccccccccccc-----
Confidence 66666666666666666666666553 23332 23455666666666665543322211
Q ss_pred ceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccccccc
Q 047790 496 QGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYL 575 (885)
Q Consensus 496 ~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L 575 (885)
.......++.++|++|.++ +|.+. .+|+.++++++|++|
T Consensus 244 --------------------------------~~~~~~~l~~l~L~~~~l~--------~~~l~-~l~~~l~~l~~L~~L 282 (353)
T 2z80_A 244 --------------------------------TGETNSLIKKFTFRNVKIT--------DESLF-QVMKLLNQISGLLEL 282 (353)
T ss_dssp -----------------------------------CCCCCCEEEEESCBCC--------HHHHH-HHHHHHHTCTTCCEE
T ss_pred --------------------------------cccccchhhcccccccccc--------Ccchh-hhHHHHhcccCCCEE
Confidence 1123455677777766665 55555 678888999999999
Q ss_pred ccccccCCCCCCccc-cCccccceeecccCcCCCCCCC
Q 047790 576 DFSMNMLDGHIPEKL-CSLPYLLYLNLADNRLEGEVPR 612 (885)
Q Consensus 576 ~Ls~N~l~~~ip~~l-~~l~~L~~L~l~~N~l~~~~p~ 612 (885)
||++|+++ .+|..+ ..+++|++|++++|++.+.+|.
T Consensus 283 ~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 283 EFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 99999998 677774 7899999999999999887663
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=271.13 Aligned_cols=198 Identities=27% Similarity=0.368 Sum_probs=172.1
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
..+|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 467999999999999999999876 58899999986543 234578899999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC---CcEEEeeccCcccccC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY---FEAKVSDFGLARLISD 813 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~---~~vkl~Dfg~a~~~~~ 813 (885)
||+++++|.+++.... .+++..+..++.|++.|++||| +.|++||||||+||+++.. +.+||+|||.+.....
T Consensus 101 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 9999999999887544 4899999999999999999999 8999999999999999754 4699999999877653
Q ss_pred CCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 814 CESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 814 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.. ......++..|+|||++.+. ++.++||||+|+++|+|++|+.||..
T Consensus 177 ~~--~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~ 224 (287)
T 2wei_A 177 NT--KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYG 224 (287)
T ss_dssp CS--SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CC--ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCC
Confidence 22 12233578899999998764 88999999999999999999999865
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-30 Score=279.85 Aligned_cols=199 Identities=20% Similarity=0.322 Sum_probs=166.8
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
...|++.+.||+|+||.||+|++.+ .+|+|++.... ....+.+.+|++++++++||||+++++++......++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4679999999999999999998754 58999987543 2233567789999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC---
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC--- 814 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~--- 814 (885)
|+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++ ++.++|+|||.+......
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred cccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999999876667999999999999999999999 89999999999999998 579999999998765321
Q ss_pred -CCCcccCCCCCCccCCcccccC---------CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 -ESHVSTDTADTIGYVPSEYGQA---------GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 -~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.........++..|+|||++.+ ..++.++||||||+++|||++|+.||..
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 245 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT 245 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSS
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 1122233458899999998875 3578899999999999999999999974
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=276.34 Aligned_cols=201 Identities=27% Similarity=0.412 Sum_probs=169.9
Q ss_pred eeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcc--cCCCCccceeeeeEeCC----ee
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDM--VKHQNLVQLLGYCSVGE----EK 732 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~~~~~~~~~----~~ 732 (885)
+..+|++.+.||+|+||.||+|++ +++.||+|++.... ...+.+|+++++. ++||||+++++++.... ..
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~ 115 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 115 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred ccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence 446799999999999999999987 58899999986542 4567788888877 78999999999998765 78
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcc-----CCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG-----FKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~-----~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
++||||+++++|.+++... .+++..+..++.|++.|++|||.. .+.+|+||||||+||+++.++.+||+|||.
T Consensus 116 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 193 (342)
T 1b6c_B 116 WLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 193 (342)
T ss_dssp EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCC
Confidence 9999999999999999754 489999999999999999999932 146899999999999999999999999999
Q ss_pred cccccCCCCC---cccCCCCCCccCCcccccCCC------CCCcchhHHHHHHHHHHHhC----------CCCCCCC
Q 047790 808 ARLISDCESH---VSTDTADTIGYVPSEYGQAGR------ANERGDIYSFGVILLELVTG----------KQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~------~~~~~DvwslGvvl~elltg----------~~P~~~~ 865 (885)
+......... ......+++.|+|||++.+.. ++.++|||||||++|||++| ..||...
T Consensus 194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~ 270 (342)
T 1b6c_B 194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 270 (342)
T ss_dssp CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence 9876543322 224457899999999988763 33689999999999999999 7788654
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-30 Score=280.55 Aligned_cols=201 Identities=24% Similarity=0.341 Sum_probs=169.4
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeC-----Ce
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVG-----EE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~ 731 (885)
+..+|++.+.||+|+||.||+|++. +++.||+|++..... ....++.+|++++++++||||+++++++..+ ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 3467999999999999999999875 588999999865332 2345678999999999999999999987654 67
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.++||||+. ++|.+++... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 899999996 5999988753 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCCC---------cccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCESH---------VSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~~~---------~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...... ......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 532111 1123467999999998765 67899999999999999999999999754
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.6e-30 Score=283.41 Aligned_cols=200 Identities=25% Similarity=0.282 Sum_probs=170.3
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC-CC-----CccceeeeeEeCCe
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQ-----NLVQLLGYCSVGEE 731 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~-----~i~~~~~~~~~~~~ 731 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++.... .....+..|+++++.++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 3567999999999999999999865 57889999997533 22456778888888886 44 49999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc--CCCcEEEeeccCc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN--DYFEAKVSDFGLA 808 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~--~~~~vkl~Dfg~a 808 (885)
.++||||+. ++|.+++.... ..+++..+..++.|++.|++|||.. +.||+||||||+||+++ .++.+||+|||.+
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999995 59999988643 4589999999999999999999931 47899999999999995 4778999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...... .....+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 209 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 876432 23457899999999999999999999999999999999999999754
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=279.01 Aligned_cols=199 Identities=20% Similarity=0.273 Sum_probs=170.0
Q ss_pred eeeeEEeecceecccCCceEEEEEeCC-C-CeEEEEEecccccccHHHHHHHHHHhcccCCCC------ccceeeeeEeC
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPD-Q-KTVAVKKLSQATGQCDREFAAEMETLDMVKHQN------LVQLLGYCSVG 729 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~-~-~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~------i~~~~~~~~~~ 729 (885)
.+..+|++.+.||+|+||.||+|.+.. + +.||+|++.... .....+.+|+++++.++|++ ++.+++++...
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 16 WLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred eecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 345689999999999999999998753 4 689999986532 33567888999999987655 88999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEE--------------
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILL-------------- 794 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~-------------- 794 (885)
+..++||||+ ++++.+++... ...+++..+..++.|++.|++||| +.||+||||||+||++
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred CeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccc
Confidence 9999999999 66777766643 346899999999999999999999 9999999999999999
Q ss_pred -----cCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 795 -----NDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 795 -----~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+..+.+||+|||.+..... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHE----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTS----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccCCCcEEEeecCccccccc----cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 5678899999999976443 223457899999999999999999999999999999999999999754
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.1e-30 Score=300.29 Aligned_cols=195 Identities=26% Similarity=0.428 Sum_probs=164.3
Q ss_pred cceecccCCceEEEEEeC---CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 666 ENVIGGGGFRTAFKGTMP---DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~---~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.++||+|+||.||+|.+. .++.||+|+++.... ...+++.+|++++++++||||+++++++.. +..++||||++
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 358999999999999653 367899999976432 235789999999999999999999999864 55789999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC--c
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH--V 818 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~--~ 818 (885)
+++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.+...... .
T Consensus 453 ~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 453 LGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp TEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 99999999754 45899999999999999999999 899999999999999999999999999999876543222 1
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 576 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 222345788999999999999999999999999999998 99999753
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.8e-30 Score=279.99 Aligned_cols=198 Identities=25% Similarity=0.326 Sum_probs=166.9
Q ss_pred eeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCe--
Q 047790 657 VLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE-- 731 (885)
Q Consensus 657 ~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~-- 731 (885)
+-+..+|.+.+.||+|+||.||+|.+. +|+.||+|++..... ....++.+|+++++.++||||+++++++.....
T Consensus 20 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 99 (353)
T 3coi_A 20 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR 99 (353)
T ss_dssp EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred cccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccc
Confidence 445678999999999999999999875 588999999875432 224578899999999999999999999876543
Q ss_pred ----eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 732 ----KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 732 ----~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
.++||||++ ++|.+++. ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.
T Consensus 100 ~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 100 NFYDFYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp GCCCCEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred cceeEEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999996 58877664 24899999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+...... .....+++.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 227 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 8765432 233467999999999887 67899999999999999999999999753
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=273.93 Aligned_cols=200 Identities=24% Similarity=0.322 Sum_probs=151.0
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHH-HhcccCCCCccceeeeeEeCCeeEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEME-TLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~-~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++..... ....++..|+. +++.++||||+++++++..++..++|
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 3467999999999999999999875 588999999976432 22345555655 67788999999999999999999999
Q ss_pred EecccCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 736 YEYMVNGSLDDWLRN----RAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~----~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
|||+++ ++.+++.. ....+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|||.+..
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 999975 88887763 2456899999999999999999999 77 999999999999999999999999999977
Q ss_pred ccCCCCCcccCCCCCCccCCcccc----cCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYG----QAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
..... ......++..|+|||++ .+..++.++||||+|+++|+|++|+.||..
T Consensus 176 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (327)
T 3aln_A 176 LVDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred ccccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 65422 22334689999999998 456789999999999999999999999975
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=282.13 Aligned_cols=204 Identities=22% Similarity=0.296 Sum_probs=170.3
Q ss_pred eceeeeeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcccC-----------CCCccce
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-----------HQNLVQL 722 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-----------~~~i~~~ 722 (885)
|..+...+|++.+.||+|+||.||+|++ .+++.||+|++.... .....+.+|++++++++ ||||+++
T Consensus 13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~ 91 (373)
T 1q8y_A 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKL 91 (373)
T ss_dssp TCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCC
T ss_pred CCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHH
Confidence 3444557899999999999999999986 458899999987533 23466888999998886 7899999
Q ss_pred eeeeEeCC----eeEEEEecccCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEc-
Q 047790 723 LGYCSVGE----EKLLVYEYMVNGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLN- 795 (885)
Q Consensus 723 ~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~- 795 (885)
++++...+ ..++||||+ +++|.+++... ...+++..+..++.|++.|++||| ++ ||+||||||+||+++
T Consensus 92 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~ 167 (373)
T 1q8y_A 92 LDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEI 167 (373)
T ss_dssp CEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEE
T ss_pred HHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEec
Confidence 99987644 789999999 88999998763 345899999999999999999999 87 999999999999994
Q ss_pred -----CCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 796 -----DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 796 -----~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
..+.+||+|||.+...... .....+|+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 168 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 240 (373)
T 1q8y_A 168 VDSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEG 240 (373)
T ss_dssp EETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred cCCCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcc
Confidence 4447999999999876432 2334689999999999999999999999999999999999999986543
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.8e-30 Score=278.38 Aligned_cols=200 Identities=22% Similarity=0.248 Sum_probs=147.2
Q ss_pred eeeeeEEeec-ceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe----CC
Q 047790 657 VLVIAIIVFE-NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV----GE 730 (885)
Q Consensus 657 ~~~~~~~~~~-~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~----~~ 730 (885)
..+..+|++. +.||+|+||.||+|.+. +++.||+|++.... ....+....++.+.||||+++++++.. +.
T Consensus 24 ~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 4455678885 56999999999999876 58999999986532 222223334566789999999999876 44
Q ss_pred eeEEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEEEeecc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAKVSDFG 806 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vkl~Dfg 806 (885)
..++||||+++++|.+++..+. ..+++..+..++.|++.|++||| +.||+||||||+||+++. .+.+||+|||
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred eEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 5799999999999999998643 35899999999999999999999 899999999999999975 4459999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.+...... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||....
T Consensus 177 ~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 233 (336)
T 3fhr_A 177 FAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT 233 (336)
T ss_dssp TCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred cceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 99865432 2233467999999999988889999999999999999999999996543
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-30 Score=275.75 Aligned_cols=218 Identities=23% Similarity=0.362 Sum_probs=179.9
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc------cHHHHHHHHHHhcccC--CCCccceeeeeEeC
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ------CDREFAAEMETLDMVK--HQNLVQLLGYCSVG 729 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~------~~~~~~~E~~~l~~l~--~~~i~~~~~~~~~~ 729 (885)
...+|++.+.||+|+||.||+|.+. +++.||+|++...... ....+.+|++++++++ ||||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 3457999999999999999999864 5889999998754321 2245678999999996 59999999999999
Q ss_pred CeeEEEEecccC-CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-CCCcEEEeeccC
Q 047790 730 EEKLLVYEYMVN-GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGL 807 (885)
Q Consensus 730 ~~~~lv~e~~~~-~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-~~~~vkl~Dfg~ 807 (885)
+..++|||++.+ ++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++ +++.+||+|||.
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred CcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 999999999976 89999998643 4899999999999999999999 89999999999999999 788999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC---------CCCCCCCCHHHH
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPE---------FEDKDGGNLVDW 877 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~---------~~~~~~~~l~~~ 877 (885)
+...... ......++..|+|||++.+..+ +.++||||||+++|||++|+.||... ........+.+.
T Consensus 197 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~l 273 (320)
T 3a99_A 197 GALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 273 (320)
T ss_dssp CEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHHH
T ss_pred ccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcccccccccCCHHHHHH
Confidence 9876542 2234568999999999887766 67899999999999999999998632 122233445666
Q ss_pred HHHHHh
Q 047790 878 VLLMMK 883 (885)
Q Consensus 878 ~~~~~~ 883 (885)
+..++.
T Consensus 274 i~~~l~ 279 (320)
T 3a99_A 274 IRWCLA 279 (320)
T ss_dssp HHHHTC
T ss_pred HHHHcc
Confidence 666554
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-30 Score=276.17 Aligned_cols=219 Identities=25% Similarity=0.330 Sum_probs=172.8
Q ss_pred eeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc------cHHHHHHHHHHhccc----CCCCccceeeee
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ------CDREFAAEMETLDMV----KHQNLVQLLGYC 726 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~------~~~~~~~E~~~l~~l----~~~~i~~~~~~~ 726 (885)
....+|++.+.||+|+||.||+|++. +++.||+|++...... ....+.+|+++++++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 34567999999999999999999864 5889999999754321 123456789999888 899999999999
Q ss_pred EeCCeeEEEEec-ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc-CCCcEEEee
Q 047790 727 SVGEEKLLVYEY-MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-DYFEAKVSD 804 (885)
Q Consensus 727 ~~~~~~~lv~e~-~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~-~~~~vkl~D 804 (885)
..++..++|||| +.+++|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++ .++.+||+|
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEECC
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEEE
Confidence 988999999999 78899999998654 4899999999999999999999 89999999999999999 888999999
Q ss_pred ccCcccccCCCCCcccCCCCCCccCCcccccCCCCC-CcchhHHHHHHHHHHHhCCCCCCCC---------CCCCCCCCH
Q 047790 805 FGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN-ERGDIYSFGVILLELVTGKQPTGPE---------FEDKDGGNL 874 (885)
Q Consensus 805 fg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslGvvl~elltg~~P~~~~---------~~~~~~~~l 874 (885)
||.+....... .....++..|+|||++.+..+. .++||||+|+++|+|++|+.||... ........+
T Consensus 184 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 260 (312)
T 2iwi_A 184 FGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDC 260 (312)
T ss_dssp CSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCCCCTTSCHHH
T ss_pred cchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhhccCCcccCCHHH
Confidence 99998765422 2345689999999998877664 5899999999999999999999642 122233445
Q ss_pred HHHHHHHHh
Q 047790 875 VDWVLLMMK 883 (885)
Q Consensus 875 ~~~~~~~~~ 883 (885)
.+.+..++.
T Consensus 261 ~~li~~~l~ 269 (312)
T 2iwi_A 261 CALIRRCLA 269 (312)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHcc
Confidence 666666654
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-29 Score=273.94 Aligned_cols=253 Identities=23% Similarity=0.218 Sum_probs=171.4
Q ss_pred CCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCC--CC
Q 047790 52 RHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGS--IP 129 (885)
Q Consensus 52 ~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~p 129 (885)
..|.|.+|.|+..+++ .+|..+. ++|++|+|++|.++...+..|+++++|++|+|++|+++.. .|
T Consensus 5 C~C~~~~l~c~~~~l~-----------~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 71 (306)
T 2z66_A 5 CSCSGTEIRCNSKGLT-----------SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCS 71 (306)
T ss_dssp CEEETTEEECCSSCCS-----------SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEE
T ss_pred CeeCCCEEEcCCCCcc-----------cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcc
Confidence 3488998888764332 2344332 5788888888888754444577888888888888877622 35
Q ss_pred ccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCC-cccCCCCCCccccccccccCCCCCccccccc
Q 047790 130 SQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIP-SRLGDLTQLQDLDLSDNLLSGSLPVSLLKNL 208 (885)
Q Consensus 130 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l 208 (885)
..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++ ++...+..+
T Consensus 72 ~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l 149 (306)
T 2z66_A 72 QSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV-AFNGIFNGL 149 (306)
T ss_dssp HHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEE-CSTTTTTTC
T ss_pred cccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCc-cchhhcccC
Confidence 56666777777777777777 456667777777777777777765443 456677777777777777663 333346666
Q ss_pred ccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCC
Q 047790 209 QSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSL 288 (885)
Q Consensus 209 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 288 (885)
++|++|++++|++++ ..+|..+..+++|++|++++|++++..|..+..+++|
T Consensus 150 ~~L~~L~l~~n~l~~----------------------------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 201 (306)
T 2z66_A 150 SSLEVLKMAGNSFQE----------------------------NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 201 (306)
T ss_dssp TTCCEEECTTCEEGG----------------------------GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cCCCEEECCCCcccc----------------------------ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCC
Confidence 666666666666653 1234445566677777777787777767777777778
Q ss_pred cEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC--CceeEEeecCcccc
Q 047790 289 VEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL--PLKVFDLQYNNFTG 347 (885)
Q Consensus 289 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~L~~L~Ls~N~l~~ 347 (885)
++|+|++|++++..+..+..+++|++|++++|++++..|..+... .|+.|++++|.+++
T Consensus 202 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 202 QVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 888888887777777677777777777777777777666665554 46666666666654
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=279.00 Aligned_cols=203 Identities=26% Similarity=0.269 Sum_probs=156.7
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC-------
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE------- 730 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~------- 730 (885)
...+|++.+.||+|+||.||+|++. +++.||+|++..... ...+..+|++.++.++||||+++++++....
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 99 (360)
T 3e3p_A 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDI 99 (360)
T ss_dssp HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCE
T ss_pred hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccce
Confidence 3457999999999999999999875 588999998865432 2345667888888999999999999986533
Q ss_pred eeEEEEecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-CCcEEEeecc
Q 047790 731 EKLLVYEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-YFEAKVSDFG 806 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-~~~vkl~Dfg 806 (885)
..++||||+++ ++.+.+.. ....+++..+..++.|++.|++|+|. ++.||+||||||+||+++. ++.+||+|||
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg 177 (360)
T 3e3p_A 100 YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLKLCDFG 177 (360)
T ss_dssp EEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred eEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence 37899999976 55554432 44558999999999999999999993 3689999999999999996 8899999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQAGR-ANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.+..+.... ......+|+.|+|||++.+.. ++.++||||+||++|+|++|+.||....
T Consensus 178 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 236 (360)
T 3e3p_A 178 SAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN 236 (360)
T ss_dssp TCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 998765432 223456899999999987654 8999999999999999999999997643
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-29 Score=271.75 Aligned_cols=200 Identities=22% Similarity=0.301 Sum_probs=153.9
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc-c-HHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ-C-DREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~-~-~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
.+.+|++.+.||+|+||.||+|.+. +++.||+|++...... . .+.+.++..+++.++||||+++++++..++..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 3567999999999999999999875 5899999999754322 1 23344555667888999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
|||+ ++.+..+.......+++..+..++.|++.|++||| ++ ||+||||||+||+++.++.+||+|||.+..+...
T Consensus 103 ~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp ECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred Eecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 9999 66777766655566999999999999999999999 75 9999999999999999999999999998766542
Q ss_pred CCCcccCCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 815 ESHVSTDTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 815 ~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
. ......+++.|+|||++. +..++.++||||+|+++|+|++|+.||..
T Consensus 179 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (318)
T 2dyl_A 179 K--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred c--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCC
Confidence 2 223446899999999984 45688999999999999999999999975
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=284.40 Aligned_cols=197 Identities=21% Similarity=0.302 Sum_probs=160.2
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|.+.++||+|+||.||.....+++.||+|++..... ..+.+|+++++.+ +||||+++++++.+....|+||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 46999999999999997666566889999999865432 2356799999998 7999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-----CCcEEEeeccCcccccCC
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-----YFEAKVSDFGLARLISDC 814 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-----~~~vkl~Dfg~a~~~~~~ 814 (885)
. ++|.+++........+..+..++.|++.|++||| +.||+||||||+||+++. ...+||+|||++......
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 5 5999999876555666667899999999999999 899999999999999953 235889999999876543
Q ss_pred CC--CcccCCCCCCccCCccccc---CCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 815 ES--HVSTDTADTIGYVPSEYGQ---AGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 815 ~~--~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.. .......+|+.|+|||++. ...++.++||||+||++|||++ |..||..
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~ 232 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence 21 2223456899999999988 4567889999999999999999 9999864
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-30 Score=295.22 Aligned_cols=200 Identities=25% Similarity=0.371 Sum_probs=171.2
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEe------CCe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSV------GEE 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~ 731 (885)
+++|++.++||+|+||.||+|.+. +++.||+|++.... .....++.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 478999999999999999999874 58899999987543 2335678899999999999999999998754 567
Q ss_pred eEEEEecccCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCc---EEEeecc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRA--ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFE---AKVSDFG 806 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~---vkl~Dfg 806 (885)
.++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++. ++|+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 799999999999999998643 25888899999999999999999 899999999999999986654 8999999
Q ss_pred CcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 807 LARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 807 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.+....... ......++..|+|||++.+..++.++||||+||++|+|++|+.||.+
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 998765432 23445789999999999999999999999999999999999999964
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-29 Score=283.13 Aligned_cols=198 Identities=24% Similarity=0.315 Sum_probs=158.4
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..|.+++.||+|+||.||.+...+|+.||+|++.... .+.+.+|+++++++ +||||+++++++.+++..++||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 4577789999999999987777789999999986532 45678899999876 7999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCC------CHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCC-------------CcE
Q 047790 740 VNGSLDDWLRNRAASL------DWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDY-------------FEA 800 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~------~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~-------------~~v 800 (885)
. |+|.+++....... .+..+..++.|++.|++||| +.||+||||||+||+++.. +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 59999998543211 22235679999999999999 8999999999999999754 479
Q ss_pred EEeeccCcccccCCCCC---cccCCCCCCccCCcccccC-------CCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 801 KVSDFGLARLISDCESH---VSTDTADTIGYVPSEYGQA-------GRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
||+|||.+..+...... ......+|+.|+|||++.+ ..++.++||||+||++|||++ |+.||...
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 99999999887543221 1224568999999999876 568999999999999999999 99999753
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=271.17 Aligned_cols=181 Identities=21% Similarity=0.222 Sum_probs=97.5
Q ss_pred CCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCccc-ccccccCCcceeeccccccCCCCCcccCCC-CceeE
Q 047790 261 CSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE-DVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVF 338 (885)
Q Consensus 261 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L 338 (885)
+++|++|++++|.++ .+|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|++.+..+..+..+ .|++|
T Consensus 77 ~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 344444444444444 233334444444444444444444433 344444555555555554444444444333 34444
Q ss_pred EeecCcccc-ccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccc
Q 047790 339 DLQYNNFTG-VIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFF 417 (885)
Q Consensus 339 ~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 417 (885)
++++|.+++ ..|..+..+++|++|++++|.+++..|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 444444443 3455555555555555555555555555566666666666666666655555666666666666666666
Q ss_pred cCcCCCccCCCC-cccEEEcCCcccC
Q 047790 418 DGIIPMEFGDCI-SLNTLDLGSNNLN 442 (885)
Q Consensus 418 ~~~~p~~~~~l~-~L~~L~Ls~N~l~ 442 (885)
++..|..+..++ +|++|+|++|.++
T Consensus 236 ~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 236 MTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp CBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred cccCHHHHHhhhccCCEEEccCCCee
Confidence 666666666663 6666666666664
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.1e-29 Score=263.04 Aligned_cols=179 Identities=15% Similarity=0.081 Sum_probs=155.4
Q ss_pred eceeeeeEEeecceecccCCceEEEEEeCC-CCeEEEEEeccccccc---HHHHHHHHHHhcccCCCCccceeeeeEeCC
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQC---DREFAAEMETLDMVKHQNLVQLLGYCSVGE 730 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 730 (885)
|..++.++|++.+.||+|+||.||+|++.. ++.||+|++....... .+++.+|++++++++||||+++++++.+++
T Consensus 25 g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~ 104 (286)
T 3uqc_A 25 GARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA 104 (286)
T ss_dssp TCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred CCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC
Confidence 444666789999999999999999998765 8899999997654322 367889999999999999999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..|+||||++|++|.++++.. .....+..++.|++.|++||| +.||+||||||+||+++.++.+||++++.
T Consensus 105 ~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~--- 175 (286)
T 3uqc_A 105 GGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPAT--- 175 (286)
T ss_dssp EEEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCC---
T ss_pred cEEEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccc---
Confidence 999999999999999999642 466678899999999999999 89999999999999999999999985432
Q ss_pred ccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
++ .++.++||||+||++|||++|+.||.....
T Consensus 176 ------------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~ 207 (286)
T 3uqc_A 176 ------------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGV 207 (286)
T ss_dssp ------------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSB
T ss_pred ------------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 22 367889999999999999999999986543
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=279.79 Aligned_cols=233 Identities=21% Similarity=0.228 Sum_probs=160.4
Q ss_pred ccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCC
Q 047790 80 VSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDI 159 (885)
Q Consensus 80 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 159 (885)
+|..+. +++++|+|++|.+++..|..|+++++|++|+|++|+|++..|..|..+++|++|+|++|++++..+..|..+
T Consensus 69 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 146 (452)
T 3zyi_A 69 VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYL 146 (452)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSC
T ss_pred cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhccc
Confidence 454433 567778888887777777777777888888888887777667777777777778887777776666667777
Q ss_pred ccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCccccee
Q 047790 160 KQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLY 239 (885)
Q Consensus 160 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 239 (885)
++|++|+|++|+++...+..|.++++|++|++++|...+.++...|.++++|++|++++|++++. |
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~------------- 212 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P------------- 212 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-------------
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-------------
Confidence 77777777777777666667777777777777774444467766677777777777777776531 1
Q ss_pred cccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccc
Q 047790 240 LGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319 (885)
Q Consensus 240 l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 319 (885)
.+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++
T Consensus 213 -----------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 275 (452)
T 3zyi_A 213 -----------------NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAH 275 (452)
T ss_dssp -----------------CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred -----------------cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCC
Confidence 133456677777777777776677777777777777777777777676677777777776666
Q ss_pred cccCCCCCcccCCC-CceeEEeecCcc
Q 047790 320 NRISGSIPEYISEL-PLKVFDLQYNNF 345 (885)
Q Consensus 320 N~l~~~~p~~~~~~-~L~~L~Ls~N~l 345 (885)
|++++..+..+..+ .|+.|+|++|.+
T Consensus 276 N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 276 NNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp SCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred CcCCccChHHhccccCCCEEEccCCCc
Confidence 66665544444433 344444444443
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=300.21 Aligned_cols=196 Identities=21% Similarity=0.287 Sum_probs=167.2
Q ss_pred eeeeEEeecceecccCCceEEEEEeC--CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCe---
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMP--DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEE--- 731 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~--~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~--- 731 (885)
.+.++|++.++||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++++||||+++++++...+.
T Consensus 77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 44578999999999999999999875 58899999986543 2334578899999999999999999999987654
Q ss_pred --eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 732 --KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 732 --~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
.|+||||++|++|.+++.. .+++..+..++.|++.+++|+| +.||+||||||+||+++.+ .+||+|||.+.
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred ceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccch
Confidence 6999999999999987753 5899999999999999999999 8999999999999999875 89999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
..... ....+|+.|+|||++.+.. +.++|||||||++|+|++|..||....
T Consensus 230 ~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~ 280 (681)
T 2pzi_A 230 RINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRY 280 (681)
T ss_dssp ETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEE
T ss_pred hcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccc
Confidence 76532 3456899999999987654 889999999999999999999987643
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=266.90 Aligned_cols=225 Identities=20% Similarity=0.264 Sum_probs=182.3
Q ss_pred CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecc
Q 047790 334 PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLN 413 (885)
Q Consensus 334 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 413 (885)
.++.|+|++|+++ .+|..+..+++|++|++++|.+. .+|..+..+++|++|+|++|+++ .+|..+..+++|++|+|+
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 3555566666655 44555666777777777777777 66667777888888888888887 667788888888888888
Q ss_pred cccccCcCCCccCC---------CCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCC
Q 047790 414 SNFFDGIIPMEFGD---------CISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS 484 (885)
Q Consensus 414 ~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 484 (885)
+|++.+.+|..+.. +++|++|+|++|+++ .+|..+..+++|++|+|++|++++
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-----------------~lp~~l~~l~~L~~L~L~~N~l~~- 220 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-----------------SLPASIANLQNLKSLKIRNSPLSA- 220 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-----------------CCCGGGGGCTTCCEEEEESSCCCC-
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-----------------cchHhhcCCCCCCEEEccCCCCCc-
Confidence 88877778777654 888999999888875 678888999999999999999984
Q ss_pred CCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccch
Q 047790 485 IPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPP 564 (885)
Q Consensus 485 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~ 564 (885)
+|+.+..+++|+.|++++|++.+.+ |..|+.+++|+.|+|+ +|.+.+.+|.
T Consensus 221 l~~~l~~l~~L~~L~Ls~n~~~~~~----------------p~~~~~l~~L~~L~L~-------------~n~~~~~~p~ 271 (328)
T 4fcg_A 221 LGPAIHHLPKLEELDLRGCTALRNY----------------PPIFGGRAPLKRLILK-------------DCSNLLTLPL 271 (328)
T ss_dssp CCGGGGGCTTCCEEECTTCTTCCBC----------------CCCTTCCCCCCEEECT-------------TCTTCCBCCT
T ss_pred CchhhccCCCCCEEECcCCcchhhh----------------HHHhcCCCCCCEEECC-------------CCCchhhcch
Confidence 7778899999999999999888755 7788889999999998 4555668899
Q ss_pred hccCcccccccccccccCCCCCCccccCccccceeecccCcCCC
Q 047790 565 ELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEG 608 (885)
Q Consensus 565 ~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~ 608 (885)
+++++++|++|+|++|++.+.+|..++++++|+.+++..|.+..
T Consensus 272 ~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 272 DIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp TGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred hhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999887653
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-30 Score=277.90 Aligned_cols=252 Identities=21% Similarity=0.245 Sum_probs=186.1
Q ss_pred ccccCCcceeeccccccCCCCCcccCCCCceeEEeecCcc-ccccCcccc-------CccccceeecccccccCCCcccc
Q 047790 306 FDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNF-TGVIPVSLW-------NSENLMEFNAASNLLEGSLSWEI 377 (885)
Q Consensus 306 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~l~~N~l~~~~~~~~ 377 (885)
++..++|++|++++|.+ .+|..+... ++.|++++|++ ...+|..+. ++++|++|++++|.+++..|..+
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~-L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI-IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH-HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH-HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 44455566666666666 444433322 56666666666 334444444 57778888888888887777765
Q ss_pred --cccccccEEEccCCcccccCccccccc-----ccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEE
Q 047790 378 --SNAVALEKLDLSSNMLTRQIPKKIGNL-----TNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYL 450 (885)
Q Consensus 378 --~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l 450 (885)
..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|..+++|++|+|++|++.+..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~----- 189 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER----- 189 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH-----
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch-----
Confidence 7888888888888888876 7777777 88999999999998888888889999999999988875321
Q ss_pred eecCCcccCCCchhc--ccCCCCCEEeccCccccC--CCC-CCcccccccceeeeccccceeccccccccccCCccCCCC
Q 047790 451 LLNNNMLSGKIPGSL--SRLTNLTTLNLFGNLLTG--SIP-PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSV 525 (885)
Q Consensus 451 ~l~~n~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~ 525 (885)
.+|..+ ..+++|++|+|++|++++ .++ ..+..+++|+.|++++|++++.+|
T Consensus 190 ---------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------------- 245 (312)
T 1wwl_A 190 ---------GLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG--------------- 245 (312)
T ss_dssp ---------HHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC---------------
T ss_pred ---------HHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc---------------
Confidence 123344 778889999999998873 122 233566889999999998886542
Q ss_pred CccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCc
Q 047790 526 PTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNR 605 (885)
Q Consensus 526 p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~ 605 (885)
...+..+++|+.|+|++|+++ .+|..+. ++|++|||++|+|++. |. +..+++|++|++++|+
T Consensus 246 ~~~~~~l~~L~~L~Ls~N~l~--------------~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~ 307 (312)
T 1wwl_A 246 APSCDWPSQLNSLNLSFTGLK--------------QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNP 307 (312)
T ss_dssp CSCCCCCTTCCEEECTTSCCS--------------SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCT
T ss_pred hhhhhhcCCCCEEECCCCccC--------------hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCC
Confidence 145566889999999966665 6677776 8999999999999864 76 8899999999999999
Q ss_pred CCC
Q 047790 606 LEG 608 (885)
Q Consensus 606 l~~ 608 (885)
+++
T Consensus 308 l~~ 310 (312)
T 1wwl_A 308 FLD 310 (312)
T ss_dssp TTC
T ss_pred CCC
Confidence 986
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=277.40 Aligned_cols=255 Identities=25% Similarity=0.252 Sum_probs=132.6
Q ss_pred cceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCC
Q 047790 312 LSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSN 391 (885)
Q Consensus 312 L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 391 (885)
...++.+++.++. +|..+. ..++.|+|++|++++..+..|.++++|++|++++|.+.+..+..|.++++|++|+|++|
T Consensus 45 ~~~v~c~~~~l~~-iP~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 45 FSKVICVRKNLRE-VPDGIS-TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp SCEEECCSCCCSS-CCSCCC-TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCEEEeCCCCcCc-CCCCCC-CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 4566777777663 343322 24666666666666665555555555555555555555555555555555555555555
Q ss_pred cccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCC
Q 047790 392 MLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNL 471 (885)
Q Consensus 392 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L 471 (885)
+++...+..|..+++|++|+|++|.++++.+..|..+++|++|++++|+.- ....+..|.++++|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l---------------~~i~~~~~~~l~~L 187 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRL---------------SYISEGAFEGLSNL 187 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTC---------------CEECTTTTTTCSSC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCc---------------ceeCcchhhccccc
Confidence 555444445555555555555555555444445555555555555543211 11122234444555
Q ss_pred CEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceee
Q 047790 472 TTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGL 551 (885)
Q Consensus 472 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l 551 (885)
+.|+|++|+++ .+| .+..+.+|+.|+|++|++++
T Consensus 188 ~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~-------------------------------------------- 221 (440)
T 3zyj_A 188 RYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSA-------------------------------------------- 221 (440)
T ss_dssp CEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCE--------------------------------------------
T ss_pred CeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCc--------------------------------------------
Confidence 55555555544 233 24444444444444444443
Q ss_pred eecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC-ccccccccccccCCccc
Q 047790 552 YVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GICQNLSIISLTGNKDL 630 (885)
Q Consensus 552 ~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~ 630 (885)
..|..|.++++|++|+|++|++++..|..+..+++|++|+|++|+|++.++.. ..+.+++.+++.+|||.
T Consensus 222 ---------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 222 ---------IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ---------ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ---------cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 33444555555555555555555555555555555555555555555444332 33455556666666666
Q ss_pred cccccCCccccccc
Q 047790 631 CEKIMGSDCQILTF 644 (885)
Q Consensus 631 c~~~~~~~c~~~~~ 644 (885)
| ||...|+
T Consensus 293 C------dC~l~~l 300 (440)
T 3zyj_A 293 C------NCDILWL 300 (440)
T ss_dssp C------SSTTHHH
T ss_pred C------CCCchHH
Confidence 7 6766654
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=284.61 Aligned_cols=289 Identities=23% Similarity=0.270 Sum_probs=138.9
Q ss_pred CCCCCCCCCCcccCCcccc--------CCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCC
Q 047790 44 LSGWNKTTRHCHWFGVKCR--------HSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLK 115 (885)
Q Consensus 44 ~~~w~~~~~~c~w~gv~c~--------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 115 (885)
.++|..+.+||.|.|..|. ...++.+++++++++ .+|. .+. ++|+
T Consensus 12 w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~------------------------~l~--~~L~ 64 (622)
T 3g06_A 12 WSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPD------------------------CLP--AHIT 64 (622)
T ss_dssp HHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCS------------------------CCC--TTCS
T ss_pred HHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccCh------------------------hhC--CCCc
Confidence 3457777889999876432 223444444444444 3444 333 4455
Q ss_pred EEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccc
Q 047790 116 MLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNL 195 (885)
Q Consensus 116 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 195 (885)
+|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|+
T Consensus 65 ~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~ 132 (622)
T 3g06_A 65 TLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQ 132 (622)
T ss_dssp EEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSC
T ss_pred EEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCC
Confidence 5555555544 2333 2445555555555554 2333 34455555555555542 222 33445555555555
Q ss_pred cCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccc
Q 047790 196 LSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLS 275 (885)
Q Consensus 196 l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 275 (885)
++ .+|.. +++|++|++++|++++ +|.. +++|+.|+++.|.. ..+| ..+++|+.|++++|+++
T Consensus 133 l~-~lp~~----l~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l------~~l~---~~~~~L~~L~Ls~N~l~ 194 (622)
T 3g06_A 133 LT-SLPVL----PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQL------TSLP---MLPSGLQELSVSDNQLA 194 (622)
T ss_dssp CS-CCCCC----CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC------SCCC---CCCTTCCEEECCSSCCS
T ss_pred CC-cCCCC----CCCCCEEECcCCcCCC-cCCc---cCCCCEEECCCCCC------CCCc---ccCCCCcEEECCCCCCC
Confidence 54 34432 2455555555555542 1111 11111111111110 0011 11234555555555554
Q ss_pred ccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccC
Q 047790 276 GPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWN 355 (885)
Q Consensus 276 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~ 355 (885)
+ +|.. +++|+.|++++|.++..+. .+++ |+.|++++|++++. | ..
T Consensus 195 ~-l~~~---~~~L~~L~L~~N~l~~l~~----~~~~-----------------------L~~L~Ls~N~L~~l-p---~~ 239 (622)
T 3g06_A 195 S-LPTL---PSELYKLWAYNNRLTSLPA----LPSG-----------------------LKELIVSGNRLTSL-P---VL 239 (622)
T ss_dssp C-CCCC---CTTCCEEECCSSCCSSCCC----CCTT-----------------------CCEEECCSSCCSCC-C---CC
T ss_pred C-CCCc---cchhhEEECcCCcccccCC----CCCC-----------------------CCEEEccCCccCcC-C---CC
Confidence 3 2221 2344455555554443321 1234 44444444444432 2 22
Q ss_pred ccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCC
Q 047790 356 SENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCI 429 (885)
Q Consensus 356 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 429 (885)
+++|+.|++++|.|+.. |. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..++
T Consensus 240 l~~L~~L~Ls~N~L~~l-p~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 240 PSELKELMVSGNRLTSL-PM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCcCcEEECCCCCCCcC-Cc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 34555555555555532 22 3456777777777776 4566677777777777777777776666555444
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-28 Score=277.97 Aligned_cols=255 Identities=24% Similarity=0.243 Sum_probs=134.3
Q ss_pred cceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCC
Q 047790 312 LSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSN 391 (885)
Q Consensus 312 L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 391 (885)
...++.+++.++. +|..+. ..++.|+|++|++++..|..|.++++|++|++++|.+.+..+..|.++++|++|+|++|
T Consensus 56 ~~~v~c~~~~l~~-iP~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 56 FSKVVCTRRGLSE-VPQGIP-SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp SCEEECCSSCCSS-CCSCCC-TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CcEEEECCCCcCc-cCCCCC-CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 4566666666663 333222 14566666666666555555555555555555555555544445555555555555555
Q ss_pred cccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCC
Q 047790 392 MLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNL 471 (885)
Q Consensus 392 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L 471 (885)
++++..+..|..+++|++|+|++|+++++.+..|.++++|++|++++|
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~-------------------------------- 181 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL-------------------------------- 181 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC--------------------------------
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCC--------------------------------
Confidence 555444444444555555555555554444444444455555544442
Q ss_pred CEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceee
Q 047790 472 TTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGL 551 (885)
Q Consensus 472 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l 551 (885)
|.+....+..|.++.+|+.|+|++|++++ +| .+..+++|+.|+|++|++
T Consensus 182 -------~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-----------------~~-~~~~l~~L~~L~Ls~N~l------ 230 (452)
T 3zyi_A 182 -------KKLEYISEGAFEGLFNLKYLNLGMCNIKD-----------------MP-NLTPLVGLEELEMSGNHF------ 230 (452)
T ss_dssp -------TTCCEECTTTTTTCTTCCEEECTTSCCSS-----------------CC-CCTTCTTCCEEECTTSCC------
T ss_pred -------CCccccChhhccCCCCCCEEECCCCcccc-----------------cc-cccccccccEEECcCCcC------
Confidence 22222222234455555555555555442 11 244555555555553333
Q ss_pred eecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCC-ccccccccccccCCccc
Q 047790 552 YVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GICQNLSIISLTGNKDL 630 (885)
Q Consensus 552 ~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~ 630 (885)
++..|..|.++++|++|+|++|++++..|..+..+++|++|+|++|+|++.++.. ..+.+++.+++++|||.
T Consensus 231 -------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 231 -------PEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp -------SEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred -------cccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 2334555555666666666666666555555666666666666666666544432 34555666667777777
Q ss_pred cccccCCccccccc
Q 047790 631 CEKIMGSDCQILTF 644 (885)
Q Consensus 631 c~~~~~~~c~~~~~ 644 (885)
| ||...|+
T Consensus 304 C------dC~~~~l 311 (452)
T 3zyi_A 304 C------DCDILWL 311 (452)
T ss_dssp C------STTTHHH
T ss_pred C------CCCchHH
Confidence 7 7777664
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-31 Score=300.41 Aligned_cols=305 Identities=20% Similarity=0.181 Sum_probs=217.1
Q ss_pred CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecc
Q 047790 334 PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLN 413 (885)
Q Consensus 334 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 413 (885)
.|+.|+|++|.+++..|..|..+++|+.|++++|.+.+..| |..+++|++|+|++|.|++..+ .++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 58888888888888877888888888888888888877665 7788888888888888875433 2778888888
Q ss_pred cccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcc-cc
Q 047790 414 SNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFG-DS 492 (885)
Q Consensus 414 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l 492 (885)
+|.|++..+.. +++|+.|+|++|.++ +..|..+..+++|+.|+|++|.+++.+|..+. .+
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~----------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l 168 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKIT----------------MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS 168 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCC----------------SGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGT
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCC----------------CCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhC
Confidence 88888765543 467778888777764 45677888899999999999999988888876 78
Q ss_pred cccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccc
Q 047790 493 LKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQL 572 (885)
Q Consensus 493 ~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L 572 (885)
++|+.|+|++|++++.. .+..+++|+.|+|++|+++ .+|+.++.+++|
T Consensus 169 ~~L~~L~Ls~N~l~~~~------------------~~~~l~~L~~L~Ls~N~l~--------------~~~~~~~~l~~L 216 (487)
T 3oja_A 169 DTLEHLNLQYNFIYDVK------------------GQVVFAKLKTLDLSSNKLA--------------FMGPEFQSAAGV 216 (487)
T ss_dssp TTCCEEECTTSCCCEEE------------------CCCCCTTCCEEECCSSCCC--------------EECGGGGGGTTC
T ss_pred CcccEEecCCCcccccc------------------ccccCCCCCEEECCCCCCC--------------CCCHhHcCCCCc
Confidence 89999999999998642 2335888999999966665 456678899999
Q ss_pred cccccccccCCCCCCccccCccccceeecccCcCC-CCCCC-Ccccccccccccc-------CCccccccccCCcccccc
Q 047790 573 EYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLE-GEVPR-SGICQNLSIISLT-------GNKDLCEKIMGSDCQILT 643 (885)
Q Consensus 573 ~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~-~~~p~-~~~~~~~~~~~~~-------~N~~~c~~~~~~~c~~~~ 643 (885)
++|+|++|+|++ +|..+..+++|+.|++++|++. +.+|. ...+..+..+++. +|+..| .|....
T Consensus 217 ~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~c------~~~~~~ 289 (487)
T 3oja_A 217 TWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEEC------TVPTLG 289 (487)
T ss_dssp SEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHHHHHHTSSSSCCC------SSTTCE
T ss_pred cEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccccccccCCCcccc------cCCccc
Confidence 999999999984 8888999999999999999988 33332 3445555666665 777777 332211
Q ss_pred ccceeEEEeEeeceeeeeEEeecceecccCCceEEEEEeCCCCeEEEEEeccc--ccccHHHHHHHHHHhcccCCCCccc
Q 047790 644 FGKLALVGIVVGSVLVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQA--TGQCDREFAAEMETLDMVKHQNLVQ 721 (885)
Q Consensus 644 ~~~~~~~g~~~g~~~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~ 721 (885)
.. + .++.+..+.+|..+ .+++|+.... .....+.|..|++++.+++|+|+++
T Consensus 290 ~~---------~------------~~~~~~~~~~~~~~-----l~~~~~~~~~~~~~~g~~eF~~Eve~L~~i~HrNLV~ 343 (487)
T 3oja_A 290 HY---------G------------AYCCEDLPAPFADR-----LIALKRKEHALLSGQGSETERLECERENQARQREIDA 343 (487)
T ss_dssp EE---------T------------TEEECCCSCHHHHH-----HHHHHHHHHCSCC-----CHHHHHHHHHHHHHHHHHH
T ss_pred cc---------c------------ccccccccchhhhH-----HHHHHHHhhhhcccccHHHHHHHHHHHhcccccchhh
Confidence 00 0 01122222222111 1111111111 1223567999999999999999999
Q ss_pred eeeeeEeC
Q 047790 722 LLGYCSVG 729 (885)
Q Consensus 722 ~~~~~~~~ 729 (885)
+.+||...
T Consensus 344 L~gyC~s~ 351 (487)
T 3oja_A 344 LKEQYRTV 351 (487)
T ss_dssp HHHHTCCC
T ss_pred HHHHhcCh
Confidence 99998643
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=260.49 Aligned_cols=261 Identities=21% Similarity=0.212 Sum_probs=195.3
Q ss_pred cccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCcccccccccc
Q 047790 60 KCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLE 139 (885)
Q Consensus 60 ~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 139 (885)
.|.....+.++.++.+++ .+|..+ .++|++|+|++|.+++..+..|+.+++|++|+|++|++++..|..|+.+++|+
T Consensus 7 ~C~~~~~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 83 (285)
T 1ozn_A 7 VCYNEPKVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83 (285)
T ss_dssp EEECSSSCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred eECCCCCeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCC
Confidence 344433355566666665 355433 46899999999999887778899999999999999999987788899999999
Q ss_pred EeeeeccC-CCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeec
Q 047790 140 TISLRSNS-FTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSN 218 (885)
Q Consensus 140 ~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~ 218 (885)
+|+|++|. ++...|..|..+++|++|++++|++++..|..|.++++|++|++++|+++ .+|...+..+++|++|++++
T Consensus 84 ~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~ 162 (285)
T 1ozn_A 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHG 162 (285)
T ss_dssp EEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred EEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc-ccCHhHhccCCCccEEECCC
Confidence 99999997 77666888899999999999999998887888889999999999999998 67766688888999999999
Q ss_pred ccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCC
Q 047790 219 NLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNML 298 (885)
Q Consensus 219 N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 298 (885)
|++++..+.. +..+++|++|++++|++++..|..+..+++|++|++++|.+
T Consensus 163 n~l~~~~~~~-----------------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 213 (285)
T 1ozn_A 163 NRISSVPERA-----------------------------FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNL 213 (285)
T ss_dssp SCCCEECTTT-----------------------------TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcccccCHHH-----------------------------hcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcC
Confidence 8887433322 44556777777788888777777788888888888888888
Q ss_pred cCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccc
Q 047790 299 SGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSL 353 (885)
Q Consensus 299 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~ 353 (885)
++.++..+..+++|++|++++|.+....+.......++.+..+.+.+....|..+
T Consensus 214 ~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 214 SALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp SCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGG
T ss_pred CcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCchHh
Confidence 8777777777888888888888776433221000013333445555555555443
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-31 Score=310.74 Aligned_cols=417 Identities=12% Similarity=0.066 Sum_probs=311.5
Q ss_pred CcEEEEEEecccc---cccccccc------------cCCCCCCEEecCCCcccCcCCcCccCc--CCCCEEeccCCc-CC
Q 047790 64 SRVVSLVIQTQSL---KGPVSPFL------------FNLSSLRILDLSKNLLFGQLSPQVSNL--KRLKMLSVGENQ-LS 125 (885)
Q Consensus 64 ~~v~~l~l~~~~l---~g~~~~~l------------~~l~~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~L~~n~-l~ 125 (885)
.++..++++++.. .|.+|... ..+++|++|+|++|.+++..+..++.. ++|++|+|++|. ++
T Consensus 73 ~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~ 152 (592)
T 3ogk_B 73 PNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFT 152 (592)
T ss_dssp TTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEE
T ss_pred CCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcC
Confidence 3688889877422 12333222 278999999999999988777777774 459999999987 22
Q ss_pred C-CCCccccccccccEeeeeccCCCCC----CCccccCCccCceEEccCCcCCc----cCCcccCCCCCCcccccccccc
Q 047790 126 G-SIPSQLGLLTRLETISLRSNSFTGE----MPSELGDIKQLKSLDFSGNGLNG----TIPSRLGDLTQLQDLDLSDNLL 196 (885)
Q Consensus 126 ~-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l 196 (885)
. .++.....+++|++|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+.++++|++|++++|.+
T Consensus 153 ~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~ 232 (592)
T 3ogk_B 153 TDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEI 232 (592)
T ss_dssp HHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBG
T ss_pred HHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccH
Confidence 1 1223334789999999999998866 33345678999999999999973 3445567889999999999999
Q ss_pred CCCCCcccccccccccEEEeecccCc---ccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCc
Q 047790 197 SGSLPVSLLKNLQSLSYLDVSNNLLS---GNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNK 273 (885)
Q Consensus 197 ~~~~p~~~~~~l~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 273 (885)
. .+|. .+..+++|++|++++.... +..+..+..+++|+.+.+.... .+.+|..+..+++|++|++++|.
T Consensus 233 ~-~l~~-~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~------~~~l~~~~~~~~~L~~L~Ls~~~ 304 (592)
T 3ogk_B 233 L-ELVG-FFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG------PNEMPILFPFAAQIRKLDLLYAL 304 (592)
T ss_dssp G-GGHH-HHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC------TTTGGGGGGGGGGCCEEEETTCC
T ss_pred H-HHHH-HHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc------hhHHHHHHhhcCCCcEEecCCCc
Confidence 8 5774 4889999999999864433 3455677888999999885432 45677888899999999999999
Q ss_pred cccccc-ccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccc-----------cccCCCCCcc-cCCC-CceeEE
Q 047790 274 LSGPIP-RELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN-----------NRISGSIPEY-ISEL-PLKVFD 339 (885)
Q Consensus 274 l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-----------N~l~~~~p~~-~~~~-~L~~L~ 339 (885)
+++... ..+..+++|++|+++++...+.++..+..+++|++|++++ |.+++..... .... .|+.|+
T Consensus 305 l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~ 384 (592)
T 3ogk_B 305 LETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMA 384 (592)
T ss_dssp CCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEE
T ss_pred CCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEE
Confidence 876544 4467899999999994433334455567889999999993 5665432222 2223 799999
Q ss_pred eecCccccccCccccC-ccccceeecc----cccccCC-----CcccccccccccEEEccCC--cccccCcccccc-ccc
Q 047790 340 LQYNNFTGVIPVSLWN-SENLMEFNAA----SNLLEGS-----LSWEISNAVALEKLDLSSN--MLTRQIPKKIGN-LTN 406 (885)
Q Consensus 340 Ls~N~l~~~~p~~~~~-l~~L~~L~l~----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~ 406 (885)
++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|++|++++| .+++..+..+.. +++
T Consensus 385 l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~ 464 (592)
T 3ogk_B 385 VYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPN 464 (592)
T ss_dssp EEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTT
T ss_pred eecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCcc
Confidence 9999999888777765 8899999996 6778764 3444777999999999854 477666666654 889
Q ss_pred ccceecccccccC-cCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCC
Q 047790 407 IQILKLNSNFFDG-IIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSI 485 (885)
Q Consensus 407 L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 485 (885)
|+.|++++|.+++ .++..+..+++|++|++++|.+++ ..++..+..+++|+.|+|++|++++.-
T Consensus 465 L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~---------------~~~~~~~~~l~~L~~L~ls~n~it~~~ 529 (592)
T 3ogk_B 465 VRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE---------------RAIAAAVTKLPSLRYLWVQGYRASMTG 529 (592)
T ss_dssp CCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH---------------HHHHHHHHHCSSCCEEEEESCBCCTTC
T ss_pred ceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH---------------HHHHHHHHhcCccCeeECcCCcCCHHH
Confidence 9999999999986 345667889999999999998752 134555678999999999999998653
Q ss_pred CCCc-ccccccceeeeccc
Q 047790 486 PPEF-GDSLKVQGLYLGHN 503 (885)
Q Consensus 486 p~~~-~~l~~L~~L~Ls~N 503 (885)
...+ ..++.+....+..+
T Consensus 530 ~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 530 QDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp TTGGGGCCTTEEEEEECCC
T ss_pred HHHHHHhCCCcEEEEecCc
Confidence 3333 24555555555543
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=8.3e-30 Score=278.51 Aligned_cols=194 Identities=16% Similarity=0.137 Sum_probs=159.8
Q ss_pred eeeeEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--------cccHHHHHHHHHHhcccC---------CCCcc
Q 047790 658 LVIAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--------GQCDREFAAEMETLDMVK---------HQNLV 720 (885)
Q Consensus 658 ~~~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--------~~~~~~~~~E~~~l~~l~---------~~~i~ 720 (885)
+...+|++.++||+|+||.||+|++ +++.||+|++.... ....+.+.+|+++++.++ ||||+
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred cccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 3456799999999999999999988 67999999997543 223377889999998886 55555
Q ss_pred ceee-----------------eeEe-------------CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHH
Q 047790 721 QLLG-----------------YCSV-------------GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARG 770 (885)
Q Consensus 721 ~~~~-----------------~~~~-------------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~ 770 (885)
++.+ ++.+ +...|+||||+++|++.+.+.+ ..+++..++.++.|++.|
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHH
Confidence 5554 4433 6789999999999976666643 448999999999999999
Q ss_pred HHHHhccCCCCceecCCCCCcEEEcCCC--------------------cEEEeeccCcccccCCCCCcccCCCCCCccCC
Q 047790 771 ISFLHHGFKPYIIHMDIKTSNILLNDYF--------------------EAKVSDFGLARLISDCESHVSTDTADTIGYVP 830 (885)
Q Consensus 771 l~~LH~~~~~~i~H~dlkp~Nil~~~~~--------------------~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~a 830 (885)
++|||+ +.||+||||||+||+++.++ .+||+|||+|+..... ...+|+.|+|
T Consensus 174 L~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMD 245 (336)
T ss_dssp HHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTC
T ss_pred HHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccC
Confidence 999993 37899999999999999876 8999999999876532 3468999999
Q ss_pred cccccCCCCCCcchhHHHHHH-HHHHHhCCCCCC
Q 047790 831 SEYGQAGRANERGDIYSFGVI-LLELVTGKQPTG 863 (885)
Q Consensus 831 PE~~~~~~~~~~~DvwslGvv-l~elltg~~P~~ 863 (885)
||++.+.. +.++||||++++ .+++++|..||.
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 99998777 889999998777 778999999985
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.7e-28 Score=272.19 Aligned_cols=240 Identities=20% Similarity=0.251 Sum_probs=188.1
Q ss_pred cccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCC
Q 047790 73 TQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEM 152 (885)
Q Consensus 73 ~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 152 (885)
+.+++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..
T Consensus 52 ~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 128 (440)
T 3zyj_A 52 RKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIP 128 (440)
T ss_dssp SCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCC
T ss_pred CCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeC
Confidence 33443 4665554 68899999999998888889999999999999999999777788999999999999999999776
Q ss_pred CccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCC
Q 047790 153 PSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNL 232 (885)
Q Consensus 153 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 232 (885)
+..|..+++|++|+|++|+++...+..|.++++|++|+|++|+..+.++...|.++++|++|++++|+++. +|
T Consensus 129 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~------ 201 (440)
T 3zyj_A 129 NGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP------ 201 (440)
T ss_dssp TTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC------
T ss_pred HhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc------
Confidence 77889999999999999999977777889999999999998655557888778888999999999988862 22
Q ss_pred CcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCc
Q 047790 233 KKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNL 312 (885)
Q Consensus 233 ~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 312 (885)
.+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|
T Consensus 202 ------------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 257 (440)
T 3zyj_A 202 ------------------------NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 257 (440)
T ss_dssp ------------------------CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTC
T ss_pred ------------------------ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCC
Confidence 13455678888888888887777788888888888888888887777777777777
Q ss_pred ceeeccccccCCCCCcccCCC-CceeEEeecCccc
Q 047790 313 SELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFT 346 (885)
Q Consensus 313 ~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~ 346 (885)
++|+|++|++++..+..+..+ .|+.|+|++|.+.
T Consensus 258 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 258 VEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 777777777776555554444 4555555555443
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.4e-30 Score=275.08 Aligned_cols=109 Identities=17% Similarity=0.157 Sum_probs=56.2
Q ss_pred cCCCCCcEEEecCCcccc--ccc-ccccCCCCCcEEEccCCCCcCccc-ccccccCCcceeeccccccCCCCCcccCCCC
Q 047790 259 GNCSMLKYISLSNNKLSG--PIP-RELCNSGSLVEINLDGNMLSGTIE-DVFDRCTNLSELVLVNNRISGSIPEYISELP 334 (885)
Q Consensus 259 ~~l~~L~~L~Ls~N~l~~--~~p-~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 334 (885)
..+++|++|++++|++++ .++ ..+..+++|++|+|++|++++.+| ..+..+++|++|+|++|+|+ .+|..
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~----- 271 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG----- 271 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS-----
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh-----
Confidence 445566666666666652 111 223344555555555555555442 33444555555555555555 33332
Q ss_pred ceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccc
Q 047790 335 LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTR 395 (885)
Q Consensus 335 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 395 (885)
+. ++|++|++++|+|++. |. +..+++|++|+|++|++++
T Consensus 272 ------------------~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 272 ------------------LP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp ------------------CC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred ------------------cc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 22 4444555555555444 33 5566666667777776654
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-28 Score=273.18 Aligned_cols=197 Identities=14% Similarity=0.144 Sum_probs=154.8
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc---ccHHHHHHHHHHhcccCC-CCccceee-----------
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG---QCDREFAAEMETLDMVKH-QNLVQLLG----------- 724 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~---~~~~~~~~E~~~l~~l~~-~~i~~~~~----------- 724 (885)
..|..+++||+|+||.||+|++. +++.||+|++..... ...+.+.+|+.+++.++| ++......
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 45888999999999999999854 589999999873322 235779999999999987 32221111
Q ss_pred ----------eeEe-----CCeeEEEEecccCCCHHHHHhh------cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCce
Q 047790 725 ----------YCSV-----GEEKLLVYEYMVNGSLDDWLRN------RAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783 (885)
Q Consensus 725 ----------~~~~-----~~~~~lv~e~~~~~sL~~~l~~------~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~ 783 (885)
++.. ....+++|+++ +++|.++++. ....+++..+..++.|++.|++||| +.||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 1111 12356777766 6799998852 2334777889999999999999999 89999
Q ss_pred ecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccc----------cCCCCCCcchhHHHHHHHH
Q 047790 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG----------QAGRANERGDIYSFGVILL 853 (885)
Q Consensus 784 H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~DvwslGvvl~ 853 (885)
||||||+||+++.++.+||+|||+++..... .....+ +.|+|||++ .+..++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998875432 233456 999999998 5566888999999999999
Q ss_pred HHHhCCCCCCCCC
Q 047790 854 ELVTGKQPTGPEF 866 (885)
Q Consensus 854 elltg~~P~~~~~ 866 (885)
||++|+.||....
T Consensus 309 elltg~~Pf~~~~ 321 (413)
T 3dzo_A 309 WIWCADLPNTDDA 321 (413)
T ss_dssp HHHHSSCCCCTTG
T ss_pred HHHHCCCCCCCcc
Confidence 9999999998653
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-29 Score=273.22 Aligned_cols=268 Identities=20% Similarity=0.179 Sum_probs=170.0
Q ss_pred CCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeec
Q 047790 263 MLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQY 342 (885)
Q Consensus 263 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~ 342 (885)
.++..+++.+.+....+..+..+++|++|+|++|++++.++..|..+++|++|+|++|++++..+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--------------- 75 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--------------- 75 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE---------------
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh---------------
Confidence 45666777777765555555556677777777777777766677777777777777776654332
Q ss_pred CccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCC
Q 047790 343 NNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIP 422 (885)
Q Consensus 343 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 422 (885)
+..+++|++|++++|.+++.. ..++|++|++++|++++..+.. +++|+.|++++|++++..|
T Consensus 76 ----------~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~ 137 (317)
T 3o53_A 76 ----------LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRD 137 (317)
T ss_dssp ----------ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGG
T ss_pred ----------hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccc
Confidence 334444444555544444322 2256666666666666554433 4566777777777776666
Q ss_pred CccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhc-ccCCCCCEEeccCccccCCCCCCcccccccceeeec
Q 047790 423 MEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSL-SRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLG 501 (885)
Q Consensus 423 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 501 (885)
..+..+++|++|++++|++++ ..|..+ ..+++|++|+|++|++++. |. ...+++|+.|+++
T Consensus 138 ~~~~~l~~L~~L~Ls~N~l~~----------------~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls 199 (317)
T 3o53_A 138 LDEGCRSRVQYLDLKLNEIDT----------------VNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLS 199 (317)
T ss_dssp BCTGGGSSEEEEECTTSCCCE----------------EEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECC
T ss_pred hhhhccCCCCEEECCCCCCCc----------------ccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECC
Confidence 666667777777777666642 223333 3567777777777777643 32 2236677777777
Q ss_pred cccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccccccccccccc
Q 047790 502 HNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNM 581 (885)
Q Consensus 502 ~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~ 581 (885)
+|++++. |..|..+++|+.|+|++|+++ .+|..+..+++|++|++++|+
T Consensus 200 ~N~l~~l-----------------~~~~~~l~~L~~L~L~~N~l~--------------~l~~~~~~l~~L~~L~l~~N~ 248 (317)
T 3o53_A 200 SNKLAFM-----------------GPEFQSAAGVTWISLRNNKLV--------------LIEKALRFSQNLEHFDLRGNG 248 (317)
T ss_dssp SSCCCEE-----------------CGGGGGGTTCSEEECTTSCCC--------------EECTTCCCCTTCCEEECTTCC
T ss_pred CCcCCcc-----------------hhhhcccCcccEEECcCCccc--------------chhhHhhcCCCCCEEEccCCC
Confidence 7777632 444677777777777765554 456677777777777777777
Q ss_pred CC-CCCCccccCccccceeecc-cCcCCCCCCC
Q 047790 582 LD-GHIPEKLCSLPYLLYLNLA-DNRLEGEVPR 612 (885)
Q Consensus 582 l~-~~ip~~l~~l~~L~~L~l~-~N~l~~~~p~ 612 (885)
++ +.+|..+..++.|+.|+++ .+.++|..|.
T Consensus 249 ~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 249 FHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp CBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred ccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 77 6677777777777777777 4456665543
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.7e-28 Score=257.38 Aligned_cols=231 Identities=24% Similarity=0.221 Sum_probs=113.2
Q ss_pred ccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceeccccc-ccCcCCCccCCCCcccEEEc
Q 047790 358 NLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNF-FDGIIPMEFGDCISLNTLDL 436 (885)
Q Consensus 358 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L 436 (885)
++++|++++|.+.+..+..|..+++|++|+|++|++++..|..|..+++|++|++++|. ++...|..|..+++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 33444444444443333444444455555555555554445555555555555555554 44444455555555555555
Q ss_pred CCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccc
Q 047790 437 GSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL 516 (885)
Q Consensus 437 s~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 516 (885)
++|+++ +..|..+..+++|++|++++|++++..+..|..+++|+.|++++|++++..
T Consensus 113 ~~n~l~----------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------- 169 (285)
T 1ozn_A 113 DRCGLQ----------------ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP------- 169 (285)
T ss_dssp TTSCCC----------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC-------
T ss_pred CCCcCC----------------EECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC-------
Confidence 555442 223444555555555555555555444444555555555555555554322
Q ss_pred cCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCcccc
Q 047790 517 SGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYL 596 (885)
Q Consensus 517 s~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L 596 (885)
+..|..+++|+.|+|++|++ ++..|..++++++|++|++++|++++..|..+..+++|
T Consensus 170 ---------~~~~~~l~~L~~L~l~~n~l-------------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 227 (285)
T 1ozn_A 170 ---------ERAFRGLHSLDRLLLHQNRV-------------AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227 (285)
T ss_dssp ---------TTTTTTCTTCCEEECCSSCC-------------CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTC
T ss_pred ---------HHHhcCccccCEEECCCCcc-------------cccCHhHccCcccccEeeCCCCcCCcCCHHHcccCccc
Confidence 23455555555555553332 23335555555555555555555554333445555555
Q ss_pred ceeecccCcCCCCCCCCccccccccccccCCcccccc
Q 047790 597 LYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEK 633 (885)
Q Consensus 597 ~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~ 633 (885)
++|++++|++.+..+.....+.++......|...|..
T Consensus 228 ~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~ 264 (285)
T 1ozn_A 228 QYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSL 264 (285)
T ss_dssp CEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEE
T ss_pred CEEeccCCCccCCCCcHHHHHHHHhcccccCccccCC
Confidence 5566665555554443333333333444444555543
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=4e-29 Score=270.40 Aligned_cols=254 Identities=23% Similarity=0.245 Sum_probs=193.6
Q ss_pred cccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCce
Q 047790 257 EIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLK 336 (885)
Q Consensus 257 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~ 336 (885)
.+..+++|++|++++|++++..|..+..+++|++|+|++|.+++.++ +..+++|++|++++|++++..+. ..|+
T Consensus 29 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~----~~L~ 102 (317)
T 3o53_A 29 LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIE 102 (317)
T ss_dssp HHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEEC----TTCC
T ss_pred HhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCC----CCcC
Confidence 34567899999999999999888999999999999999999998776 88999999999999998753321 2466
Q ss_pred eEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceeccccc
Q 047790 337 VFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNF 416 (885)
Q Consensus 337 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 416 (885)
+|++++|++++..+. . +++|++|++++|++++..+..+..+++|++|+|++|.
T Consensus 103 ~L~l~~n~l~~~~~~------------------------~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 155 (317)
T 3o53_A 103 TLHAANNNISRVSCS------------------------R---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE 155 (317)
T ss_dssp EEECCSSCCSEEEEC------------------------C---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSC
T ss_pred EEECCCCccCCcCcc------------------------c---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCC
Confidence 666666665544322 2 3457777777777777777777777788888888888
Q ss_pred ccCcCCCccC-CCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCccccccc
Q 047790 417 FDGIIPMEFG-DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKV 495 (885)
Q Consensus 417 l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 495 (885)
+++..+..+. .+++|++|+|++|++++. |. ...+++|++|+|++|++++ +|+.+..+++|
T Consensus 156 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-----------------~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L 216 (317)
T 3o53_A 156 IDTVNFAELAASSDTLEHLNLQYNFIYDV-----------------KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGV 216 (317)
T ss_dssp CCEEEGGGGGGGTTTCCEEECTTSCCCEE-----------------EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTC
T ss_pred CCcccHHHHhhccCcCCEEECCCCcCccc-----------------cc-ccccccCCEEECCCCcCCc-chhhhcccCcc
Confidence 8776666653 677888888888877522 21 2247788888888888884 55568888888
Q ss_pred ceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccccccc
Q 047790 496 QGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYL 575 (885)
Q Consensus 496 ~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L 575 (885)
+.|++++|++++ +|..+..+++|+.|+|++|++. .+.+|..++.+++|+.|
T Consensus 217 ~~L~L~~N~l~~-----------------l~~~~~~l~~L~~L~l~~N~~~------------~~~~~~~~~~~~~L~~l 267 (317)
T 3o53_A 217 TWISLRNNKLVL-----------------IEKALRFSQNLEHFDLRGNGFH------------CGTLRDFFSKNQRVQTV 267 (317)
T ss_dssp SEEECTTSCCCE-----------------ECTTCCCCTTCCEEECTTCCCB------------HHHHHHHHHTCHHHHHH
T ss_pred cEEECcCCcccc-----------------hhhHhhcCCCCCEEEccCCCcc------------CcCHHHHHhccccceEE
Confidence 899998888872 3667888899999999966553 14678889999999999
Q ss_pred ccc-cccCCCCCCcccc
Q 047790 576 DFS-MNMLDGHIPEKLC 591 (885)
Q Consensus 576 ~Ls-~N~l~~~ip~~l~ 591 (885)
+++ .+.++|..|....
T Consensus 268 ~l~~~~~l~~~~~~~~~ 284 (317)
T 3o53_A 268 AKQTVKKLTGQNEEECT 284 (317)
T ss_dssp HHHHHHHHHSSSSCCCS
T ss_pred ECCCchhccCCchhccC
Confidence 999 5577776665443
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=255.86 Aligned_cols=175 Identities=23% Similarity=0.306 Sum_probs=149.9
Q ss_pred eeEEeec-ceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHh-cccCCCCccceeeeeEe----CCee
Q 047790 660 IAIIVFE-NVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETL-DMVKHQNLVQLLGYCSV----GEEK 732 (885)
Q Consensus 660 ~~~~~~~-~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l-~~l~~~~i~~~~~~~~~----~~~~ 732 (885)
..+|.+. +.||+|+||.||+|.+. +++.||+|++.. .....+|++++ +..+||||+++++++.. +...
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3446665 88999999999999874 588999999854 34667888887 56689999999999876 6678
Q ss_pred EEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEEEeeccCc
Q 047790 733 LLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAKVSDFGLA 808 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vkl~Dfg~a 808 (885)
++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.||+||||||+||+++. ++.++|+|||.+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999998643 35899999999999999999999 899999999999999997 788999999998
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... +..++.++||||+||++|||++|+.||...
T Consensus 168 ~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~ 201 (299)
T 3m2w_A 168 KETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSN 201 (299)
T ss_dssp EECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-
T ss_pred cccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 6532 234677899999999999999999999643
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-27 Score=273.22 Aligned_cols=263 Identities=22% Similarity=0.243 Sum_probs=201.0
Q ss_pred CCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEee
Q 047790 262 SMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQ 341 (885)
Q Consensus 262 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls 341 (885)
.+++.|++++|.++ .+|..+. ++|++|+|++|.|+.+++ .+++|++|+|++|+|++ +|. ...+|++|+++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls 109 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTS-LPV--LPPGLLELSIF 109 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCSC-CCC--CCTTCCEEEEC
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCCc-CCC--CCCCCCEEECc
Confidence 35888888888888 6677664 788899999998886554 46888899999998885 444 22368889999
Q ss_pred cCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcC
Q 047790 342 YNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGII 421 (885)
Q Consensus 342 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 421 (885)
+|++++..+ .+++|+.|++++|++++.. .. +++|++|+|++|++++ +|. .+++|+.|++++|.|++ +
T Consensus 110 ~N~l~~l~~----~l~~L~~L~L~~N~l~~lp-~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 110 SNPLTHLPA----LPSGLCKLWIFGNQLTSLP-VL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp SCCCCCCCC----CCTTCCEEECCSSCCSCCC-CC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCCCCC----CCCCcCEEECCCCCCCcCC-CC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-C
Confidence 998887544 5678888899998888643 32 3789999999999885 343 34678889999999986 4
Q ss_pred CCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeec
Q 047790 422 PMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLG 501 (885)
Q Consensus 422 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 501 (885)
| ..+++|+.|++++|+|+ .+|.. +++|+.|++++|.++ .+|.. +++|+.|+++
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~-----------------~l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls 229 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLA-----------------SLPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVS 229 (622)
T ss_dssp C---CCCTTCCEEECCSSCCS-----------------CCCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECC
T ss_pred c---ccCCCCcEEECCCCCCC-----------------CCCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEcc
Confidence 5 45678889999988886 23332 367888999999888 46653 3678889999
Q ss_pred cccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCccccccccccccc
Q 047790 502 HNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNM 581 (885)
Q Consensus 502 ~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~ 581 (885)
+|++++ + | ..+++|+.|+|++|+|+ .+|. .+++|++|+|++|+
T Consensus 230 ~N~L~~-l----------------p---~~l~~L~~L~Ls~N~L~--------------~lp~---~~~~L~~L~Ls~N~ 272 (622)
T 3g06_A 230 GNRLTS-L----------------P---VLPSELKELMVSGNRLT--------------SLPM---LPSGLLSLSVYRNQ 272 (622)
T ss_dssp SSCCSC-C----------------C---CCCTTCCEEECCSSCCS--------------CCCC---CCTTCCEEECCSSC
T ss_pred CCccCc-C----------------C---CCCCcCcEEECCCCCCC--------------cCCc---ccccCcEEeCCCCC
Confidence 998873 2 4 34578889999977765 4555 46788899999999
Q ss_pred CCCCCCccccCccccceeecccCcCCCCCCC
Q 047790 582 LDGHIPEKLCSLPYLLYLNLADNRLEGEVPR 612 (885)
Q Consensus 582 l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~ 612 (885)
|+ .+|..+..+++|+.|+|++|++++.+|.
T Consensus 273 L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 273 LT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 98 7888888999999999999998876654
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-26 Score=241.82 Aligned_cols=168 Identities=26% Similarity=0.309 Sum_probs=94.1
Q ss_pred CCCcccCCccccCC-cEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCC
Q 047790 51 TRHCHWFGVKCRHS-RVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIP 129 (885)
Q Consensus 51 ~~~c~w~gv~c~~~-~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 129 (885)
.++|.|.|+.|... .++.+++++++++ .+|..+. ++|++|+|++|.+++..+..|+++++|++|+|++|+++...+
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 47899999999753 3455566665555 2444332 455566666665555444455555555555555555554433
Q ss_pred ccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccc
Q 047790 130 SQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQ 209 (885)
Q Consensus 130 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~ 209 (885)
..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|...|..++
T Consensus 79 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~ 157 (270)
T 2o6q_A 79 GIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLT 157 (270)
T ss_dssp TTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCT
T ss_pred hhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC-ccCHhHccCCc
Confidence 44455555555555555555444445555555555555555555544445555555555555555554 44444445555
Q ss_pred cccEEEeecccCc
Q 047790 210 SLSYLDVSNNLLS 222 (885)
Q Consensus 210 ~L~~L~Ls~N~l~ 222 (885)
+|++|++++|+++
T Consensus 158 ~L~~L~L~~n~l~ 170 (270)
T 2o6q_A 158 SLKELRLYNNQLK 170 (270)
T ss_dssp TCCEEECCSSCCS
T ss_pred ccceeEecCCcCc
Confidence 5555555555444
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-30 Score=303.69 Aligned_cols=459 Identities=14% Similarity=0.132 Sum_probs=236.2
Q ss_pred CCcccCCccccCCcEEEEEEeccccccccc-ccccCCCCCCEEecCCCcccC---cCCcC------------ccCcCCCC
Q 047790 52 RHCHWFGVKCRHSRVVSLVIQTQSLKGPVS-PFLFNLSSLRILDLSKNLLFG---QLSPQ------------VSNLKRLK 115 (885)
Q Consensus 52 ~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~-~~l~~l~~L~~L~Ls~n~l~~---~~~~~------------~~~l~~L~ 115 (885)
-|++|.++... ....+++.... +..+ ..+..+++|++|+|+++.... ..|.. ...+++|+
T Consensus 33 vck~W~~~~~~--~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~ 108 (594)
T 2p1m_B 33 VCKSWYEIERW--CRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLE 108 (594)
T ss_dssp SCHHHHHHHHH--HCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHHHHHHhhhh--hceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCC
Confidence 46678888322 23344554432 2223 246678899999999975322 12222 24577888
Q ss_pred EEeccCCcCCCCCCcccc-ccccccEeeeecc-CCCCC-CCccccCCccCceEEccCCcCCccCCccc----CCCCCCcc
Q 047790 116 MLSVGENQLSGSIPSQLG-LLTRLETISLRSN-SFTGE-MPSELGDIKQLKSLDFSGNGLNGTIPSRL----GDLTQLQD 188 (885)
Q Consensus 116 ~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~~L~~ 188 (885)
+|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+ ..+++|++
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~ 188 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcE
Confidence 899988888876666665 6788888888888 55432 34444578888888888888775544333 35668888
Q ss_pred ccccccccCCCCCccc----ccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCC
Q 047790 189 LDLSDNLLSGSLPVSL----LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSML 264 (885)
Q Consensus 189 L~Ls~N~l~~~~p~~~----~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L 264 (885)
|++++|. +.++... ...+++|++|++++|.-.+.+|..+.++++|+.|.++.+..
T Consensus 189 L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~------------------- 247 (594)
T 2p1m_B 189 LNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTA------------------- 247 (594)
T ss_dssp EECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCC-------------------
T ss_pred EEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccC-------------------
Confidence 8888886 1333222 23457888888887732222555555566666665532210
Q ss_pred cEEEecCCcccccccccccCCCCCcEE-EccCCCCcCcccccccccCCcceeeccccccCCCCCc-ccCCC-CceeEEee
Q 047790 265 KYISLSNNKLSGPIPRELCNSGSLVEI-NLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPE-YISEL-PLKVFDLQ 341 (885)
Q Consensus 265 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L-~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~-~L~~L~Ls 341 (885)
+++.+.+.+ ++..+.++++|+.| .+.+... ...+..+..+++|++|++++|.+++.... .+... .|+.|+++
T Consensus 248 ---~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~ 322 (594)
T 2p1m_B 248 ---EVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVL 322 (594)
T ss_dssp ---CCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred ---ccchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCc
Confidence 011222222 22234444444444 2221111 12223333445555555555554321111 01111 34444444
Q ss_pred cCccccccCccccCccccceeecccccccCCCcccccccccccEEEc---------cCCcccccCccccc-cccccccee
Q 047790 342 YNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDL---------SSNMLTRQIPKKIG-NLTNIQILK 411 (885)
Q Consensus 342 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L---------s~N~l~~~~p~~~~-~l~~L~~L~ 411 (885)
+| ++... ++.....+++|++|++ +.+.+++.....+. .+++|+.|+
T Consensus 323 ~~-~~~~~-----------------------l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~ 378 (594)
T 2p1m_B 323 DY-IEDAG-----------------------LEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVL 378 (594)
T ss_dssp GG-GHHHH-----------------------HHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEE
T ss_pred Cc-cCHHH-----------------------HHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHH
Confidence 43 22111 1111122344555544 22344333222222 255666666
Q ss_pred cccccccCcCCCccC-CCCcccEEEcC--C----cccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCC
Q 047790 412 LNSNFFDGIIPMEFG-DCISLNTLDLG--S----NNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS 484 (885)
Q Consensus 412 Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 484 (885)
++.|.+++..+..+. .+++|+.|+++ + |.+++. .+...++..+..+++|+.|+|++ .+++.
T Consensus 379 ~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~-----------~~~~~~~~l~~~~~~L~~L~L~~-~l~~~ 446 (594)
T 2p1m_B 379 YFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLE-----------PLDIGFGAIVEHCKDLRRLSLSG-LLTDK 446 (594)
T ss_dssp EEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCC-----------CTHHHHHHHHHHCTTCCEEECCS-SCCHH
T ss_pred HhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCC-----------chhhHHHHHHhhCCCccEEeecC-cccHH
Confidence 666666544433333 35666666666 2 233210 00011223355667777777765 55444
Q ss_pred CCCCccc-ccccceeeeccccceeccccccccccCCccCCCCCccc-cccccCcEEEccCCCCCCceeeeeccccccccc
Q 047790 485 IPPEFGD-SLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSF-GNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEI 562 (885)
Q Consensus 485 ~p~~~~~-l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~i 562 (885)
.+..+.. +++|+.|+|++|.+++.. +..+ ..+++|+.|+|++|+++ +..
T Consensus 447 ~~~~l~~~~~~L~~L~L~~~~i~~~~----------------~~~l~~~~~~L~~L~L~~n~~~-------------~~~ 497 (594)
T 2p1m_B 447 VFEYIGTYAKKMEMLSVAFAGDSDLG----------------MHHVLSGCDSLRKLEIRDCPFG-------------DKA 497 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCCSSHHH----------------HHHHHHHCTTCCEEEEESCSCC-------------HHH
T ss_pred HHHHHHHhchhccEeeccCCCCcHHH----------------HHHHHhcCCCcCEEECcCCCCc-------------HHH
Confidence 3334443 566777777777765432 2222 45677777777755542 222
Q ss_pred ch-hccCcccccccccccccCCCCCCccc-cCccccceeecccCc
Q 047790 563 PP-ELGNLVQLEYLDFSMNMLDGHIPEKL-CSLPYLLYLNLADNR 605 (885)
Q Consensus 563 p~-~~~~l~~L~~L~Ls~N~l~~~ip~~l-~~l~~L~~L~l~~N~ 605 (885)
+. .+..+++|++|++++|+++..-...+ ..+|.|+...+..+.
T Consensus 498 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 498 LLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp HHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred HHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 22 33456777777777777643222222 345666555555443
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.1e-27 Score=268.69 Aligned_cols=218 Identities=22% Similarity=0.192 Sum_probs=161.6
Q ss_pred CCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEE
Q 047790 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFD 339 (885)
Q Consensus 260 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ 339 (885)
.+++|++|+|++|.+++..|..|..+++|++|+|++|.+++.++ |..+++|++|+|++|.|++..+. ..|++|+
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L~ 105 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETLH 105 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEEE
Confidence 44589999999999998888899999999999999999998776 88899999999999998864432 4688888
Q ss_pred eecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCccccc-ccccccceeccccccc
Q 047790 340 LQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIG-NLTNIQILKLNSNFFD 418 (885)
Q Consensus 340 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~ 418 (885)
+++|.+++..+.. +++|+.|++++|.+++..|..|..+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.|+
T Consensus 106 L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 8888888766543 35677777777777777777777777777777777777776666665 5677777777777777
Q ss_pred CcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCccccccccee
Q 047790 419 GIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGL 498 (885)
Q Consensus 419 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 498 (885)
+..+ +..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|.+++ +|..+..+++|+.|
T Consensus 183 ~~~~--~~~l~~L~~L~Ls~N~l~-----------------~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L 242 (487)
T 3oja_A 183 DVKG--QVVFAKLKTLDLSSNKLA-----------------FMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHF 242 (487)
T ss_dssp EEEC--CCCCTTCCEEECCSSCCC-----------------EECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEE
T ss_pred cccc--cccCCCCCEEECCCCCCC-----------------CCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEE
Confidence 5522 234667777777777664 234446667777777777777774 56666667777777
Q ss_pred eeccccce
Q 047790 499 YLGHNQLT 506 (885)
Q Consensus 499 ~Ls~N~l~ 506 (885)
++++|.++
T Consensus 243 ~l~~N~l~ 250 (487)
T 3oja_A 243 DLRGNGFH 250 (487)
T ss_dssp ECTTCCBC
T ss_pred EcCCCCCc
Confidence 77777666
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=236.86 Aligned_cols=217 Identities=25% Similarity=0.277 Sum_probs=171.1
Q ss_pred ccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCC
Q 047790 80 VSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDI 159 (885)
Q Consensus 80 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 159 (885)
+|..+. ++|++|+|++|.+++..+..|+++++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++
T Consensus 22 ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (276)
T 2z62_A 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL 99 (276)
T ss_dssp CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC
T ss_pred cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCC
Confidence 455443 578999999999988777789999999999999999997777789999999999999999998878889999
Q ss_pred ccCceEEccCCcCCccCCcccCCCCCCccccccccccCC-CCCcccccccccccEEEeecccCcccCCccccCCCcccce
Q 047790 160 KQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSG-SLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDL 238 (885)
Q Consensus 160 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 238 (885)
++|++|++++|++++..+..+.++++|++|++++|++++ .+|.. +..+++|++|++++|++++..+..+..+++|+.
T Consensus 100 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~- 177 (276)
T 2z62_A 100 SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY-FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL- 177 (276)
T ss_dssp TTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG-GGGCTTCCEEECCSSCCCEECGGGGHHHHTCTT-
T ss_pred ccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchh-hccCCCCCEEECCCCCCCcCCHHHhhhhhhccc-
Confidence 999999999999997777788999999999999999974 24554 888899999999999888655555544443332
Q ss_pred ecccccccccccccccCccccCCCCCc-EEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeec
Q 047790 239 YLGIGPYQLSLFVGRITPEIGNCSMLK-YISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVL 317 (885)
Q Consensus 239 ~l~~n~~~~~~~~~~~~~~l~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 317 (885)
|. .|++++|++++..+..+. ..+|++|+|++|++++.++..|..+++|+.|++
T Consensus 178 -------------------------l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 231 (276)
T 2z62_A 178 -------------------------LNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWL 231 (276)
T ss_dssp -------------------------CCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEEC
T ss_pred -------------------------cceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEc
Confidence 22 677888888755444443 347888888888888777777777788888888
Q ss_pred cccccCCCC
Q 047790 318 VNNRISGSI 326 (885)
Q Consensus 318 s~N~l~~~~ 326 (885)
++|.+.+..
T Consensus 232 ~~N~~~c~c 240 (276)
T 2z62_A 232 HTNPWDCSC 240 (276)
T ss_dssp CSSCBCCCT
T ss_pred cCCcccccC
Confidence 887776543
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-25 Score=234.82 Aligned_cols=211 Identities=23% Similarity=0.222 Sum_probs=133.7
Q ss_pred ccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcC
Q 047790 358 NLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLG 437 (885)
Q Consensus 358 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 437 (885)
++++|++++|.+.+..+..|.++++|++|++++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444444444444444455555666666666666665555566666666666666666666655666666666666666
Q ss_pred CcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCC-CCCCcccccccceeeeccccceeccccccccc
Q 047790 438 SNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS-IPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL 516 (885)
Q Consensus 438 ~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 516 (885)
+|+++ +..+..+..+++|++|++++|++++. +|..+..+++|+.|++++|++++..
T Consensus 109 ~n~l~----------------~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~------- 165 (276)
T 2z62_A 109 ETNLA----------------SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY------- 165 (276)
T ss_dssp TSCCC----------------CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC-------
T ss_pred CCCcc----------------ccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCC-------
Confidence 66654 12233456666667777777766643 4666777777777777777776533
Q ss_pred cCCccCCCCCccccccccCc----EEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccC
Q 047790 517 SGNKLYGSVPTSFGNLNGLT----HLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCS 592 (885)
Q Consensus 517 s~n~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~ 592 (885)
+..|..+++|+ .|++++|+++ .+|.......+|++|+|++|++++..+..+..
T Consensus 166 ---------~~~~~~l~~L~~l~l~L~ls~n~l~--------------~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 222 (276)
T 2z62_A 166 ---------CTDLRVLHQMPLLNLSLDLSLNPMN--------------FIQPGAFKEIRLKELALDTNQLKSVPDGIFDR 222 (276)
T ss_dssp ---------GGGGHHHHTCTTCCEEEECCSSCCC--------------EECTTSSCSCCEEEEECCSSCCSCCCTTTTTT
T ss_pred ---------HHHhhhhhhccccceeeecCCCccc--------------ccCccccCCCcccEEECCCCceeecCHhHhcc
Confidence 34555555555 6777755554 33444444557888888888888655555678
Q ss_pred ccccceeecccCcCCCCCCCCc
Q 047790 593 LPYLLYLNLADNRLEGEVPRSG 614 (885)
Q Consensus 593 l~~L~~L~l~~N~l~~~~p~~~ 614 (885)
+++|++|++++|++++..|...
T Consensus 223 l~~L~~L~l~~N~~~c~c~~l~ 244 (276)
T 2z62_A 223 LTSLQKIWLHTNPWDCSCPRID 244 (276)
T ss_dssp CCSCCEEECCSSCBCCCTTTTH
T ss_pred cccccEEEccCCcccccCCchH
Confidence 8888888888888888766543
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6e-25 Score=233.79 Aligned_cols=212 Identities=26% Similarity=0.243 Sum_probs=130.3
Q ss_pred ccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCc
Q 047790 377 ISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNM 456 (885)
Q Consensus 377 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~ 456 (885)
+.++++++++++++|.++. +|..+. ++++.|+|++|.+++..|..|..+++|++|+|++|+|++
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------- 69 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK------------- 69 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-------------
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-------------
Confidence 3445556666666666653 333332 456666666666666656666666666666666666642
Q ss_pred ccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCc
Q 047790 457 LSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLT 536 (885)
Q Consensus 457 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~ 536 (885)
++.. ..+++|++|++++|+++ .+|..+..+++|+.|++++|++++.. |..|..+++|+
T Consensus 70 ----~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~----------------~~~~~~l~~L~ 127 (290)
T 1p9a_G 70 ----LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLP----------------LGALRGLGELQ 127 (290)
T ss_dssp ----EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCC----------------SSTTTTCTTCC
T ss_pred ----ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccC----------------HHHHcCCCCCC
Confidence 1211 45566666666666666 56666666666777777766666322 45566677777
Q ss_pred EEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccc
Q 047790 537 HLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGIC 616 (885)
Q Consensus 537 ~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~ 616 (885)
.|+|++|+++ +..|..+..+++|++|+|++|+|++..+..+..+++|++|++++|+|+..++.....
T Consensus 128 ~L~L~~N~l~-------------~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~ 194 (290)
T 1p9a_G 128 ELYLKGNELK-------------TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGS 194 (290)
T ss_dssp EEECTTSCCC-------------CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred EEECCCCCCC-------------ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhccc
Confidence 7777755444 222344566777777777777777433334566777777777777777555544555
Q ss_pred cccccccccCCccccccccCCcccccccc
Q 047790 617 QNLSIISLTGNKDLCEKIMGSDCQILTFG 645 (885)
Q Consensus 617 ~~~~~~~~~~N~~~c~~~~~~~c~~~~~~ 645 (885)
..++.+++.+|||.| +|.+.++.
T Consensus 195 ~~L~~l~L~~Np~~C------~c~~~~l~ 217 (290)
T 1p9a_G 195 HLLPFAFLHGNPWLC------NCEILYFR 217 (290)
T ss_dssp CCCSEEECCSCCBCC------SGGGHHHH
T ss_pred ccCCeEEeCCCCccC------cCccHHHH
Confidence 567777788888888 77765543
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-26 Score=267.00 Aligned_cols=185 Identities=17% Similarity=0.060 Sum_probs=129.2
Q ss_pred eecccCCceEEEEEe-CCCCeEEEEEeccccc----------ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEE
Q 047790 668 VIGGGGFRTAFKGTM-PDQKTVAVKKLSQATG----------QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~----------~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+.|+.|.+..++. -.|+.+++|++.+... ...+++.+|+++|+++ .|+||++++++++++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 456677776666543 3488899999865321 1235689999999999 599999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||++|++|.+++...+ .++.. +|+.||+.||+|+| ++||+||||||+|||++.++.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 99999999999998644 46653 57899999999999 9999999999999999999999999999998765422
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P 861 (885)
.......||+.|+|||++.+. +..++|+|++|++++++.++..|
T Consensus 394 -~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 394 -SWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred -ccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 223345699999999998764 56779999999998877665444
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.1e-28 Score=286.20 Aligned_cols=62 Identities=8% Similarity=-0.041 Sum_probs=33.8
Q ss_pred cccCcEEEccCCCCCCceeeeecccccccccchhc-cCcccccccccccccCCCCCCc-cccCccccceeecccCcC
Q 047790 532 LNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPEL-GNLVQLEYLDFSMNMLDGHIPE-KLCSLPYLLYLNLADNRL 606 (885)
Q Consensus 532 l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~-~~l~~L~~L~Ls~N~l~~~ip~-~l~~l~~L~~L~l~~N~l 606 (885)
+++|+.|+|++|.+ ++..+..+ ..+++|++|+|++|++++..+. .+..+++|++|++++|++
T Consensus 455 ~~~L~~L~L~~~~i-------------~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 455 AKKMEMLSVAFAGD-------------SDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp CTTCCEEEEESCCS-------------SHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred chhccEeeccCCCC-------------cHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 55566666664433 22333333 4466677777777766433332 233466666777766665
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=228.10 Aligned_cols=226 Identities=23% Similarity=0.299 Sum_probs=130.0
Q ss_pred CCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEcc
Q 047790 89 SLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168 (885)
Q Consensus 89 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 168 (885)
++..++++.+.+... .....+++|+.|++++|.++. + ..++.+++|++|+|++|.+++. ..++.+++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 344455555554432 234556666666666666652 2 2356666666666666666642 356666666666666
Q ss_pred CCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccc
Q 047790 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLS 248 (885)
Q Consensus 169 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~ 248 (885)
+|++++..+..|.++++|++|+|++|+++ .+|...+..+++|++|++++|++++..+..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------------------- 152 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGV-------------------- 152 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTT--------------------
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCC-ccCHHHhccCCCCCEEECCCCccCccCHHH--------------------
Confidence 66666555555666666666666666666 455454666666666666666665333222
Q ss_pred ccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCc
Q 047790 249 LFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPE 328 (885)
Q Consensus 249 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 328 (885)
+..+++|++|++++|++++..+..+..+++|++|++++|++++.++..+..+++|++|++++|.+.+..|
T Consensus 153 ---------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~- 222 (272)
T 3rfs_A 153 ---------FDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP- 222 (272)
T ss_dssp ---------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-
T ss_pred ---------hccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-
Confidence 2334455555555565555555555556666666666666666555556666666666666665554333
Q ss_pred ccCCCCceeEEeecCccccccCccccCc
Q 047790 329 YISELPLKVFDLQYNNFTGVIPVSLWNS 356 (885)
Q Consensus 329 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l 356 (885)
.++.++++.|+++|.+|..++.+
T Consensus 223 -----~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 223 -----GIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp -----TTHHHHHHHHHTGGGBBCTTSCB
T ss_pred -----HHHHHHHHHHhCCCcccCccccc
Confidence 34555555555555555555443
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-23 Score=218.20 Aligned_cols=203 Identities=25% Similarity=0.287 Sum_probs=143.2
Q ss_pred CCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEcc
Q 047790 89 SLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168 (885)
Q Consensus 89 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 168 (885)
..+.++++++.++ .+|..+. ++|++|+|++|++++..+..|+.+++|++|+|++|.++...+..|..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4567888888876 3565554 567888888888876666677778888888888888875555566777788888888
Q ss_pred CCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccc
Q 047790 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLS 248 (885)
Q Consensus 169 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~ 248 (885)
+|++++..+..|.++++|++|+|++|+++ .++...|..+++|++|++++|++++..+..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-------------------- 152 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGV-------------------- 152 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTT--------------------
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcCCccCHhH--------------------
Confidence 88877666666777777777777777777 555555777777777777777766322222
Q ss_pred ccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCC
Q 047790 249 LFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISG 324 (885)
Q Consensus 249 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 324 (885)
+..+++|++|++++|++++..+..|..+++|++|+|++|++++.++..|..+++|+.|+|++|.+..
T Consensus 153 ---------~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 153 ---------FDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp ---------TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ---------ccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 3445667777777777776666667777777777777777777666667777777777777776653
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.6e-26 Score=251.22 Aligned_cols=259 Identities=18% Similarity=0.183 Sum_probs=171.7
Q ss_pred EEecCCcccccccccccCCCCCcEEEccCCCCcCccc----ccccccC-CcceeeccccccCCCCCcccCC------CCc
Q 047790 267 ISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE----DVFDRCT-NLSELVLVNNRISGSIPEYISE------LPL 335 (885)
Q Consensus 267 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~------~~L 335 (885)
++++.|.+++.+|..+....+|++|+|++|.+++..+ +.|..++ +|++|+|++|++++..+..+.. ..|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566666766666666666667777777777766655 5566666 6777777777776655554433 357
Q ss_pred eeEEeecCccccccCccccCc-----cccceeecccccccCCCcccccc-----cccccEEEccCCcccccCcc----cc
Q 047790 336 KVFDLQYNNFTGVIPVSLWNS-----ENLMEFNAASNLLEGSLSWEISN-----AVALEKLDLSSNMLTRQIPK----KI 401 (885)
Q Consensus 336 ~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~~~p~----~~ 401 (885)
++|+|++|++++..+..+... ++|++|++++|.+++..+..+.. .++|++|+|++|++++..+. .+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 777777777776665544333 67777888877777666555443 25788888888888754433 34
Q ss_pred cccc-cccceecccccccCcCCCccC----CC-CcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccC-CCCCEE
Q 047790 402 GNLT-NIQILKLNSNFFDGIIPMEFG----DC-ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRL-TNLTTL 474 (885)
Q Consensus 402 ~~l~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l-~~L~~L 474 (885)
..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|+|++... ..++..+..+ ++|+.|
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~------------~~l~~~l~~~~~~L~~L 230 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSY------------AELAYIFSSIPNHVVSL 230 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH------------HHHHHHHHHSCTTCCEE
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHH------------HHHHHHHhcCCCCceEE
Confidence 4444 888888888888876664443 34 588888888888752110 1256666664 589999
Q ss_pred eccCccccCCCC----CCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCC
Q 047790 475 NLFGNLLTGSIP----PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELD 546 (885)
Q Consensus 475 ~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 546 (885)
+|++|++++..+ ..+..+++|+.|++++|++++..+..+. .++..+..+++|+.|||++|++.
T Consensus 231 ~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~---------~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 231 NLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCK---------ALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp ECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHH---------HHHTTSTTCCEEEEECTTSCBCC
T ss_pred ECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHH---------HHHHHhccCCceEEEecCCCcCC
Confidence 999998886443 3356678888899998886543332222 22556778888888888877765
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.7e-24 Score=220.69 Aligned_cols=189 Identities=25% Similarity=0.266 Sum_probs=152.4
Q ss_pred CCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCc
Q 047790 51 TRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPS 130 (885)
Q Consensus 51 ~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~ 130 (885)
.+||.|.|++|... ...+++++++++ .+|..+. +++++|+|++|.+++..+..|+++++|++|+|++|++++..|.
T Consensus 2 ~~Cp~~~gC~C~~~-~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 77 (251)
T 3m19_A 2 KTCETVTGCTCNEG-KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAG 77 (251)
T ss_dssp --CHHHHSSEEEGG-GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT
T ss_pred ccCCCCCceEcCCC-CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHh
Confidence 36899999999532 345677888777 5666554 6889999999999888888899999999999999999988888
Q ss_pred cccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCccccccccc
Q 047790 131 QLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQS 210 (885)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~ 210 (885)
.|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+++ .+|...|..+++
T Consensus 78 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~ 156 (251)
T 3m19_A 78 VFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTN 156 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTT
T ss_pred HhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCC-ccCHHHcCcCcC
Confidence 8899999999999999999777788889999999999999999777777888999999999999998 677766888999
Q ss_pred ccEEEeecccCcccCCccccCCCcccceeccccc
Q 047790 211 LSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGP 244 (885)
Q Consensus 211 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 244 (885)
|++|+|++|++++..+..+..+++|+.|++++|+
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 190 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQ 190 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCC
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCc
Confidence 9999999999886555555555544444444433
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=223.43 Aligned_cols=205 Identities=25% Similarity=0.228 Sum_probs=168.1
Q ss_pred ccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCccc
Q 047790 353 LWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLN 432 (885)
Q Consensus 353 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 432 (885)
+.++++++++++++|.++... ..+. +.++.|+|++|++++..|..|..+++|+.|+|++|.|+++.+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip-~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALP-PDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCC-SCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCcCC-CCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 455667777777777776443 3332 5788999999999888888899999999999999999865443 7888999
Q ss_pred EEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccc
Q 047790 433 TLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPES 512 (885)
Q Consensus 433 ~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 512 (885)
+|++++|+++ .+|..+..+++|++|++++|++++..|..|..+++|+.|+|++|++++..
T Consensus 81 ~L~Ls~N~l~-----------------~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~--- 140 (290)
T 1p9a_G 81 TLDLSHNQLQ-----------------SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP--- 140 (290)
T ss_dssp EEECCSSCCS-----------------SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCC---
T ss_pred EEECCCCcCC-----------------cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccC---
Confidence 9999999886 67778888999999999999999777788999999999999999988433
Q ss_pred cccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccch-hccCcccccccccccccCCCCCCcccc
Q 047790 513 LGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPP-ELGNLVQLEYLDFSMNMLDGHIPEKLC 591 (885)
Q Consensus 513 ~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~-~~~~l~~L~~L~Ls~N~l~~~ip~~l~ 591 (885)
+..|..+++|+.|+|++|+++ .+|. .+..+++|++|+|++|+|+ .+|..+.
T Consensus 141 -------------~~~~~~l~~L~~L~L~~N~l~--------------~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~ 192 (290)
T 1p9a_G 141 -------------PGLLTPTPKLEKLSLANNNLT--------------ELPAGLLNGLENLDTLLLQENSLY-TIPKGFF 192 (290)
T ss_dssp -------------TTTTTTCTTCCEEECTTSCCS--------------CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTT
T ss_pred -------------hhhcccccCCCEEECCCCcCC--------------ccCHHHhcCcCCCCEEECCCCcCC-ccChhhc
Confidence 567888999999999977665 3444 4578999999999999998 7899999
Q ss_pred CccccceeecccCcCCCCC
Q 047790 592 SLPYLLYLNLADNRLEGEV 610 (885)
Q Consensus 592 ~l~~L~~L~l~~N~l~~~~ 610 (885)
.+++|+.+++++|++.+..
T Consensus 193 ~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 193 GSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp TTCCCSEEECCSCCBCCSG
T ss_pred ccccCCeEEeCCCCccCcC
Confidence 9999999999999987643
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=217.16 Aligned_cols=203 Identities=22% Similarity=0.243 Sum_probs=144.8
Q ss_pred cccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCc-CCCCCCccccccccccEeeeec-cCCCCCCCccc
Q 047790 79 PVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQ-LSGSIPSQLGLLTRLETISLRS-NSFTGEMPSEL 156 (885)
Q Consensus 79 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l 156 (885)
.+|. +. ++|++|+|++|.+++..+..|+++++|++|+|++|+ +++..+..|..+++|++|++++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 32 378888888888887777788888888888888886 7755556788888888888887 88886666778
Q ss_pred cCCccCceEEccCCcCCccCCcccCCCCCCc---ccccccc-ccCCCCCccccccccccc-EEEeecccCcccCCccccC
Q 047790 157 GDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQ---DLDLSDN-LLSGSLPVSLLKNLQSLS-YLDVSNNLLSGNIPPEIGN 231 (885)
Q Consensus 157 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~ 231 (885)
..+++|++|++++|++++ +|. |..+++|+ +|++++| +++ .+|...|.++++|+ +|++++|+++ .+|...
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~-~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~-- 175 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT-SIPVNAFQGLCNETLTLKLYNNGFT-SVQGYA-- 175 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC-EECTTTTTTTBSSEEEEECCSCCCC-EECTTT--
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchh-hcCcccccchhcceeEEEcCCCCCc-ccCHhh--
Confidence 888888888888888875 565 77777777 8888888 776 66666677777777 7777777776 333211
Q ss_pred CCcccceecccccccccccccccCccccCCCCCcEEEecCCc-ccccccccccCC-CCCcEEEccCCCCcCccccccccc
Q 047790 232 LKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNK-LSGPIPRELCNS-GSLVEINLDGNMLSGTIEDVFDRC 309 (885)
Q Consensus 232 l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~l 309 (885)
...++|+.|++++|+ +++..+..|..+ ++|++|++++|++++.++. .+
T Consensus 176 ---------------------------~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~ 225 (239)
T 2xwt_C 176 ---------------------------FNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GL 225 (239)
T ss_dssp ---------------------------TTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TC
T ss_pred ---------------------------cCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---Hh
Confidence 112457777777774 775555666666 7777777777777765554 34
Q ss_pred CCcceeecccc
Q 047790 310 TNLSELVLVNN 320 (885)
Q Consensus 310 ~~L~~L~Ls~N 320 (885)
++|+.|+++++
T Consensus 226 ~~L~~L~l~~~ 236 (239)
T 2xwt_C 226 EHLKELIARNT 236 (239)
T ss_dssp TTCSEEECTTC
T ss_pred ccCceeeccCc
Confidence 56666666654
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.9e-26 Score=247.05 Aligned_cols=268 Identities=15% Similarity=0.220 Sum_probs=159.8
Q ss_pred CCCCcccCCccccCCcEEEEEEecccccccccccccCC--CCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCC
Q 047790 50 TTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNL--SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGS 127 (885)
Q Consensus 50 ~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 127 (885)
..-|..|.++.|+...++.++++++.+. +..+..+ +.++.|++++|.+.+..+. +..+++|++|+|++|.+++.
T Consensus 33 ~~vc~~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 33 SGVCKRWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp TSSCHHHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH
Confidence 3456789999887655666777666555 2334444 6667777777766655443 44566666666666666544
Q ss_pred -CCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC-cCCcc-CCcccCCCCCCcccccccc-ccCCC-CCc
Q 047790 128 -IPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN-GLNGT-IPSRLGDLTQLQDLDLSDN-LLSGS-LPV 202 (885)
Q Consensus 128 -~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~ 202 (885)
+|..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++. ++
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~- 187 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ- 187 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH-
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH-
Confidence 5555666666666666666666555566666666666666666 45532 4444555666666666666 55422 22
Q ss_pred ccccccc-cccEEEeeccc--CcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCc-ccccc
Q 047790 203 SLLKNLQ-SLSYLDVSNNL--LSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNK-LSGPI 278 (885)
Q Consensus 203 ~~~~~l~-~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~ 278 (885)
..+..++ +|++|++++|. ++ .+.+|..+..+++|++|++++|. +++..
T Consensus 188 ~~~~~l~~~L~~L~l~~~~~~~~----------------------------~~~l~~~~~~~~~L~~L~l~~~~~l~~~~ 239 (336)
T 2ast_B 188 VAVAHVSETITQLNLSGYRKNLQ----------------------------KSDLSTLVRRCPNLVHLDLSDSVMLKNDC 239 (336)
T ss_dssp HHHHHSCTTCCEEECCSCGGGSC----------------------------HHHHHHHHHHCTTCSEEECTTCTTCCGGG
T ss_pred HHHHhcccCCCEEEeCCCcccCC----------------------------HHHHHHHHhhCCCCCEEeCCCCCcCCHHH
Confidence 2245555 66666666552 22 12344455667777777777777 66666
Q ss_pred cccccCCCCCcEEEccCCC-CcCcccccccccCCcceeeccccccCCCCCcccCCC--CceeEEeecCccccccCcccc
Q 047790 279 PRELCNSGSLVEINLDGNM-LSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL--PLKVFDLQYNNFTGVIPVSLW 354 (885)
Q Consensus 279 p~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~L~~L~Ls~N~l~~~~p~~~~ 354 (885)
+..+..+++|++|++++|. +.......+..+++|++|++++| ++. ..+..+ .+..|++++|++++..|..+.
T Consensus 240 ~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 240 FQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred HHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCccc
Confidence 7777777777778877774 33222235667777777777777 321 122222 245555666666665555443
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-24 Score=232.28 Aligned_cols=205 Identities=20% Similarity=0.199 Sum_probs=126.1
Q ss_pred cccceeecccccccCCCcccc--cccccccEEEccCCcccccCc----ccccccccccceecccccccCcCCCccCCCCc
Q 047790 357 ENLMEFNAASNLLEGSLSWEI--SNAVALEKLDLSSNMLTRQIP----KKIGNLTNIQILKLNSNFFDGIIPMEFGDCIS 430 (885)
Q Consensus 357 ~~L~~L~l~~N~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 430 (885)
++|++|++++|.+.+..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..|..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 445666666666665555555 566666666666666665433 33445667777777777777666667777777
Q ss_pred ccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCC----Ccccccccceeeeccccce
Q 047790 431 LNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPP----EFGDSLKVQGLYLGHNQLT 506 (885)
Q Consensus 431 L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~ 506 (885)
|++|+|++|++.+.... ..+..+..+++|++|+|++|+++ .+|. .+..+++|+.|+|++|+++
T Consensus 171 L~~L~Ls~N~l~~~~~~------------~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~ 237 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGL------------MAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLR 237 (310)
T ss_dssp CCEEECCSCTTCHHHHH------------HTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCC
T ss_pred CCEEECCCCCCccchhh------------hHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCC
Confidence 77777777765421000 01122356667777777777775 2232 1355567777777777776
Q ss_pred eccccccccccCCccCCCCCcccccc---ccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCC
Q 047790 507 GSIPESLGYLSGNKLYGSVPTSFGNL---NGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLD 583 (885)
Q Consensus 507 g~~p~~~~~ls~n~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~ 583 (885)
+.+ |..+..+ ++|+.|+|++|+++ .+|..+. ++|++|||++|+|+
T Consensus 238 ~~~----------------p~~~~~~~~~~~L~~L~Ls~N~l~--------------~lp~~~~--~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 238 ATV----------------NPSAPRCMWSSALNSLNLSFAGLE--------------QVPKGLP--AKLRVLDLSSNRLN 285 (310)
T ss_dssp CCC----------------CSCCSSCCCCTTCCCEECCSSCCC--------------SCCSCCC--SCCSCEECCSCCCC
T ss_pred ccc----------------hhhHHhccCcCcCCEEECCCCCCC--------------chhhhhc--CCCCEEECCCCcCC
Confidence 544 3334443 57777777755554 4555553 67788888888887
Q ss_pred CCCCccccCccccceeecccCcCCC
Q 047790 584 GHIPEKLCSLPYLLYLNLADNRLEG 608 (885)
Q Consensus 584 ~~ip~~l~~l~~L~~L~l~~N~l~~ 608 (885)
+ +|. +..+++|++|++++|+++.
T Consensus 286 ~-~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 286 R-APQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp S-CCC-TTSCCCCSCEECSSTTTSC
T ss_pred C-Cch-hhhCCCccEEECcCCCCCC
Confidence 4 343 5667778888888887763
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=221.06 Aligned_cols=205 Identities=22% Similarity=0.234 Sum_probs=118.3
Q ss_pred CCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEE
Q 047790 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFD 339 (885)
Q Consensus 260 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ 339 (885)
.+++|+.|++++|.++. + ..+..+++|++|++++|.+++. ..+..+++|++|++++|++++
T Consensus 39 ~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~--------------- 99 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS--------------- 99 (272)
T ss_dssp HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCC---------------
T ss_pred cccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCc---------------
Confidence 34455556666655552 1 2345555555555555555543 234445555555555555444
Q ss_pred eecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccC
Q 047790 340 LQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDG 419 (885)
Q Consensus 340 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 419 (885)
..+..+..+++|++|++++|.+++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|++++
T Consensus 100 --------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 100 --------LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp --------CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred --------cChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 333444444555555555555555555555566666666666666666555556666666666666666666
Q ss_pred cCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceee
Q 047790 420 IIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLY 499 (885)
Q Consensus 420 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 499 (885)
..+..|..+++|++|++++|+++ +..|..+..+++|+.|++++|.+.+. +++|+.|+
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~----------------~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~ 228 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLK----------------SVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLS 228 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCS----------------CCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHH
T ss_pred cCHHHhcCCccCCEEECCCCcCC----------------ccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHH
Confidence 66666666666666666666654 23444566666777777777766543 23466677
Q ss_pred eccccceeccccccc
Q 047790 500 LGHNQLTGSIPESLG 514 (885)
Q Consensus 500 Ls~N~l~g~~p~~~~ 514 (885)
++.|+++|.+|..++
T Consensus 229 ~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 229 EWINKHSGVVRNSAG 243 (272)
T ss_dssp HHHHHTGGGBBCTTS
T ss_pred HHHHhCCCcccCccc
Confidence 777777776655544
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-23 Score=223.91 Aligned_cols=227 Identities=21% Similarity=0.211 Sum_probs=140.6
Q ss_pred CCCCEEecCCCcccCcCCc---CccCcCCCCEEeccCCcCCCCCCccc--cccccccEeeeeccCCCCCCC----ccccC
Q 047790 88 SSLRILDLSKNLLFGQLSP---QVSNLKRLKMLSVGENQLSGSIPSQL--GLLTRLETISLRSNSFTGEMP----SELGD 158 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~---~~~~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~l~~ 158 (885)
..++.|+++++.++...-. .+..+++|++|+|++|.+++..|..+ +.+++|++|+|++|.+++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3467777777766432111 12234668888888888888888777 778888888888888876555 34456
Q ss_pred CccCceEEccCCcCCccCCcccCCCCCCccccccccccCCC--CC-cccccccccccEEEeecccCcccCCccccCCCcc
Q 047790 159 IKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGS--LP-VSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKL 235 (885)
Q Consensus 159 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 235 (885)
+++|++|+|++|++.+..|..|+.+++|++|+|++|++.+. ++ ...+..+++|++|++++|+++. ++.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~-------- 214 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTG-------- 214 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHH--------
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHH--------
Confidence 77888888888888877777888888888888888887532 22 2224677788888888887752 111
Q ss_pred cceecccccccccccccccCcc-ccCCCCCcEEEecCCcccccccccccCC---CCCcEEEccCCCCcCcccccccccCC
Q 047790 236 SDLYLGIGPYQLSLFVGRITPE-IGNCSMLKYISLSNNKLSGPIPRELCNS---GSLVEINLDGNMLSGTIEDVFDRCTN 311 (885)
Q Consensus 236 ~~L~l~~n~~~~~~~~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~ 311 (885)
++.. ++.+++|++|+|++|++++..|..+..+ ++|++|+|++|+|+.++. .+. ++
T Consensus 215 ------------------~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~-~~~--~~ 273 (310)
T 4glp_A 215 ------------------VCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPK-GLP--AK 273 (310)
T ss_dssp ------------------HHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCS-CCC--SC
T ss_pred ------------------HHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhh-hhc--CC
Confidence 0111 2344555666666666665555555444 466666666666663332 221 55
Q ss_pred cceeeccccccCCCCCcccCCC-CceeEEeecCccc
Q 047790 312 LSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFT 346 (885)
Q Consensus 312 L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~ 346 (885)
|++|+|++|+|++. |. +..+ .|+.|++++|+++
T Consensus 274 L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 274 LRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 66666666666643 22 2222 4666666666655
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=218.74 Aligned_cols=192 Identities=25% Similarity=0.347 Sum_probs=102.0
Q ss_pred ccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEE
Q 047790 356 SENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLD 435 (885)
Q Consensus 356 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 435 (885)
+++|++|++++|.+... + .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. + .+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEE
Confidence 34444444444444432 1 34455555555555555554333 55555566666666655542 2 455556666666
Q ss_pred cCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceecccccccc
Q 047790 436 LGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGY 515 (885)
Q Consensus 436 Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 515 (885)
+++|+++ .+|. +..+++|+.|++++|++++. +. +..+++|+.|++++|++++.
T Consensus 114 l~~n~l~-----------------~~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~------- 166 (308)
T 1h6u_A 114 LTSTQIT-----------------DVTP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLSIGNAQVSDL------- 166 (308)
T ss_dssp CTTSCCC-----------------CCGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECCSSCCCCC-------
T ss_pred CCCCCCC-----------------Cchh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCccEEEccCCcCCCC-------
Confidence 6655553 1222 55556666666666666532 22 55556666666666655521
Q ss_pred ccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccc
Q 047790 516 LSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPY 595 (885)
Q Consensus 516 ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~ 595 (885)
+. +..+++|+.|+|++|+++. +|. +..+++|++|+|++|++++. | .+..+++
T Consensus 167 ----------~~-l~~l~~L~~L~l~~n~l~~--------------~~~-l~~l~~L~~L~L~~N~l~~~-~-~l~~l~~ 218 (308)
T 1h6u_A 167 ----------TP-LANLSKLTTLKADDNKISD--------------ISP-LASLPNLIEVHLKNNQISDV-S-PLANTSN 218 (308)
T ss_dssp ----------GG-GTTCTTCCEEECCSSCCCC--------------CGG-GGGCTTCCEEECTTSCCCBC-G-GGTTCTT
T ss_pred ----------hh-hcCCCCCCEEECCCCccCc--------------Chh-hcCCCCCCEEEccCCccCcc-c-cccCCCC
Confidence 22 5556666666666554442 222 55566666666666666532 2 2556666
Q ss_pred cceeecccCcCCC
Q 047790 596 LLYLNLADNRLEG 608 (885)
Q Consensus 596 L~~L~l~~N~l~~ 608 (885)
|++|++++|++++
T Consensus 219 L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 219 LFIVTLTNQTITN 231 (308)
T ss_dssp CCEEEEEEEEEEC
T ss_pred CCEEEccCCeeec
Confidence 6666666666654
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-24 Score=239.83 Aligned_cols=267 Identities=19% Similarity=0.204 Sum_probs=159.8
Q ss_pred EEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCcc-ccceeecccccc
Q 047790 291 INLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSE-NLMEFNAASNLL 369 (885)
Q Consensus 291 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l 369 (885)
++++.|.+++.+|+.+...++|++|+|++|++++..+..+. ..+..++ +|++|++++|.+
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~-------------------~~l~~~~~~L~~L~Ls~N~l 63 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELI-------------------QAFANTPASVTSLNLSGNSL 63 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHH-------------------HHHHTCCTTCCEEECCSSCG
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHH-------------------HHHHhCCCceeEEECcCCCC
Confidence 45666666666666555555566666666665544331000 3344444 555555555555
Q ss_pred cCCCccccccc-----ccccEEEccCCcccccCccccccc-----ccccceecccccccCcCCCcc----CC-CCcccEE
Q 047790 370 EGSLSWEISNA-----VALEKLDLSSNMLTRQIPKKIGNL-----TNIQILKLNSNFFDGIIPMEF----GD-CISLNTL 434 (885)
Q Consensus 370 ~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~----~~-l~~L~~L 434 (885)
.+..+..+..+ ++|++|+|++|++++..+..+... ++|+.|+|++|++++..+..+ .. .++|++|
T Consensus 64 ~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L 143 (362)
T 3goz_A 64 GFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSL 143 (362)
T ss_dssp GGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEE
T ss_pred CHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEE
Confidence 55555555554 667777777777766665544443 677777777777766554433 23 2577777
Q ss_pred EcCCcccCcceeEEEEeecCCcccCCCchhcccCC-CCCEEeccCccccCCCCCCcccc-----cccceeeeccccceec
Q 047790 435 DLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLT-NLTTLNLFGNLLTGSIPPEFGDS-----LKVQGLYLGHNQLTGS 508 (885)
Q Consensus 435 ~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~g~ 508 (885)
+|++|++++... ..++..+..++ +|++|+|++|++++..+..+... .+|+.|+|++|++++.
T Consensus 144 ~Ls~N~l~~~~~------------~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~ 211 (362)
T 3goz_A 144 NLRGNDLGIKSS------------DELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLK 211 (362)
T ss_dssp ECTTSCGGGSCH------------HHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred EccCCcCCHHHH------------HHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChh
Confidence 777777652110 13344455554 78888888888876655444433 5788888888877742
Q ss_pred cccccccccCCccCCCCCcccccc-ccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCC--
Q 047790 509 IPESLGYLSGNKLYGSVPTSFGNL-NGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGH-- 585 (885)
Q Consensus 509 ~p~~~~~ls~n~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~-- 585 (885)
-.. .++..+..+ ++|+.|||++|+++.... ..++..+..+++|++|+|++|++++.
T Consensus 212 ~~~------------~l~~~l~~~~~~L~~L~Ls~N~l~~~~~---------~~l~~~~~~l~~L~~L~L~~n~l~~i~~ 270 (362)
T 3goz_A 212 SYA------------ELAYIFSSIPNHVVSLNLCLNCLHGPSL---------ENLKLLKDSLKHLQTVYLDYDIVKNMSK 270 (362)
T ss_dssp CHH------------HHHHHHHHSCTTCCEEECCSSCCCCCCH---------HHHHHTTTTTTTCSEEEEEHHHHTTCCH
T ss_pred HHH------------HHHHHHhcCCCCceEEECcCCCCCcHHH---------HHHHHHHhcCCCccEEEeccCCccccCH
Confidence 111 124455553 478888888776653210 02234456677888888888885532
Q ss_pred -----CCccccCccccceeecccCcCCCC
Q 047790 586 -----IPEKLCSLPYLLYLNLADNRLEGE 609 (885)
Q Consensus 586 -----ip~~l~~l~~L~~L~l~~N~l~~~ 609 (885)
++..+..+++|++||+++|++...
T Consensus 271 ~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 271 EQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 233566778888888888887654
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.88 E-value=9.5e-24 Score=230.51 Aligned_cols=199 Identities=17% Similarity=0.199 Sum_probs=112.6
Q ss_pred CcEEEccCCCCcCccccccccc--CCcceeeccccccCCCCCcccCCCCceeEEeecCccccc-cCccccCccccceeec
Q 047790 288 LVEINLDGNMLSGTIEDVFDRC--TNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGV-IPVSLWNSENLMEFNA 364 (885)
Q Consensus 288 L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l 364 (885)
++.+++++|.+. +..+..+ ++++.|++++|.+.+..+..+....|++|++++|.+++. +|..+..+++|++|++
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L 125 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 125 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeC
Confidence 344455544443 2334444 566666666666665555544333566666666666544 5555556666666666
Q ss_pred ccccccCCCcccccccccccEEEccCC-ccccc-Ccccccccccccceecccc-cccCc-CCCccCCCC-cccEEEcCCc
Q 047790 365 ASNLLEGSLSWEISNAVALEKLDLSSN-MLTRQ-IPKKIGNLTNIQILKLNSN-FFDGI-IPMEFGDCI-SLNTLDLGSN 439 (885)
Q Consensus 365 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~L~~L~Ls~N 439 (885)
++|.+.+..+..++.+++|++|+|++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|++|++++|
T Consensus 126 ~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 126 EGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred cCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 666665555555666666666666666 45542 4445556666666666666 66543 345555566 6666666666
Q ss_pred c--cCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCcc-ccCCCCCCcccccccceeeecccc
Q 047790 440 N--LNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNL-LTGSIPPEFGDSLKVQGLYLGHNQ 504 (885)
Q Consensus 440 ~--l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~ 504 (885)
. ++ .+.+|..+..+++|+.|++++|. +++..+..+..+++|+.|++++|.
T Consensus 206 ~~~~~---------------~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 206 RKNLQ---------------KSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp GGGSC---------------HHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred cccCC---------------HHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 3 22 12345555566666666666666 554555555555666666666553
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-22 Score=203.47 Aligned_cols=158 Identities=27% Similarity=0.321 Sum_probs=125.5
Q ss_pred CCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCc
Q 047790 51 TRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPS 130 (885)
Q Consensus 51 ~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~ 130 (885)
...|+|.+|.|+...++ .+|..+ .++|++|+|++|.+++..+..|+.+++|++|+|++|++++..+.
T Consensus 4 ~C~C~~~~v~c~~~~l~-----------~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGRT-----------SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp TCEEETTEEECCSSCCS-----------SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred CCEECCCEEEecCCCcc-----------CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 34589999999764332 234333 45789999999998877777788899999999999998876666
Q ss_pred cccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCccccccccc
Q 047790 131 QLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQS 210 (885)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~ 210 (885)
.|..+++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|.++++|++|++++|+++ .+|...+..+++
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~ 149 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTS 149 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTT
T ss_pred hcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc-eeCHHHhccCCC
Confidence 7788889999999999888766667888888888888888888776777888888888888888887 566666788888
Q ss_pred ccEEEeecccCc
Q 047790 211 LSYLDVSNNLLS 222 (885)
Q Consensus 211 L~~L~Ls~N~l~ 222 (885)
|++|++++|.+.
T Consensus 150 L~~L~l~~N~~~ 161 (208)
T 2o6s_A 150 LQYIWLHDNPWD 161 (208)
T ss_dssp CCEEECCSCCBC
T ss_pred ccEEEecCCCee
Confidence 888888888765
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-22 Score=208.14 Aligned_cols=182 Identities=26% Similarity=0.297 Sum_probs=121.6
Q ss_pred cccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCC
Q 047790 382 ALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKI 461 (885)
Q Consensus 382 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~ 461 (885)
..++++++++.++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|+++ +..
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~----------------~~~ 75 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ----------------TLS 75 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC----------------CCC
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC----------------ccC
Confidence 4556666666665 3444443 46677777777777666666777777777777766664 344
Q ss_pred chhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEcc
Q 047790 462 PGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLS 541 (885)
Q Consensus 462 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls 541 (885)
|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|++++.. +..|..+++|+.|+|+
T Consensus 76 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----------------~~~~~~l~~L~~L~Ls 139 (251)
T 3m19_A 76 AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLP----------------SGVFDRLTKLKELRLN 139 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC----------------TTTTTTCTTCCEEECC
T ss_pred HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcC----------------hhHhccCCcccEEECc
Confidence 555667777777777777777665666677777777777777776322 4456677777777777
Q ss_pred CCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCC
Q 047790 542 CNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVP 611 (885)
Q Consensus 542 ~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p 611 (885)
+|+++ +..|..++.+++|++|+|++|++++..|..+..+++|++|++++|++++...
T Consensus 140 ~N~l~-------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 140 TNQLQ-------------SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp SSCCC-------------CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CCcCC-------------ccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 55544 2233457777778888888888876666677777788888888888776533
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.88 E-value=9.6e-23 Score=234.78 Aligned_cols=215 Identities=24% Similarity=0.352 Sum_probs=154.7
Q ss_pred CCCCCCCCCCc-----ccCCc-cccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEE
Q 047790 44 LSGWNKTTRHC-----HWFGV-KCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKML 117 (885)
Q Consensus 44 ~~~w~~~~~~c-----~w~gv-~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 117 (885)
+.+|..+.++| .|.|+ .|...+++.|+++++++++ +|+.++ ++|++|+|++|.++ .+| +.+++|++|
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L 105 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYL 105 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEE
T ss_pred HHHHhccCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEE
Confidence 34565566677 79999 7887788888888888886 777663 78888888888887 566 457888888
Q ss_pred eccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccC
Q 047790 118 SVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLS 197 (885)
Q Consensus 118 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 197 (885)
+|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+++
T Consensus 106 ~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~ 173 (571)
T 3cvr_A 106 DACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLT 173 (571)
T ss_dssp ECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS
T ss_pred EccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCC
Confidence 888888886 666 654 88888888888885 565 57788888888888885 555 5678888888888887
Q ss_pred CCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccc
Q 047790 198 GSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGP 277 (885)
Q Consensus 198 ~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 277 (885)
.+|. +. ++|++|+|++|+|+ .+|. +.. +| ....+.|+.|+|++|+|+ .
T Consensus 174 -~lp~--l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L----------------------~~~~~~L~~L~Ls~N~l~-~ 221 (571)
T 3cvr_A 174 -FLPE--LP--ESLEALDVSTNLLE-SLPA-VPV--RN----------------------HHSEETEIFFRCRENRIT-H 221 (571)
T ss_dssp -CCCC--CC--TTCCEEECCSSCCS-SCCC-CC--------------------------------CCEEEECCSSCCC-C
T ss_pred -Ccch--hh--CCCCEEECcCCCCC-chhh-HHH--hh----------------------hcccccceEEecCCCcce-e
Confidence 4776 43 78888888888887 4444 321 11 011234577888888887 4
Q ss_pred ccccccCCCCCcEEEccCCCCcCccccccccc
Q 047790 278 IPRELCNSGSLVEINLDGNMLSGTIEDVFDRC 309 (885)
Q Consensus 278 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 309 (885)
+|..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 222 lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 222 IPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 67767667777777777777777766666554
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-24 Score=241.75 Aligned_cols=244 Identities=20% Similarity=0.242 Sum_probs=147.6
Q ss_pred cccccccCCCCCCEEecCCCcccCcC----CcCccCcCCCCEEeccCC---cCCCCCCccc-------cccccccEeeee
Q 047790 79 PVSPFLFNLSSLRILDLSKNLLFGQL----SPQVSNLKRLKMLSVGEN---QLSGSIPSQL-------GLLTRLETISLR 144 (885)
Q Consensus 79 ~~~~~l~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~L~~n---~l~~~~p~~~-------~~l~~L~~L~Ls 144 (885)
.++..+..+++|++|+|++|.+++.. +..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 35566778888999999999887663 345778899999999885 4445556555 678889999999
Q ss_pred ccCCCC----CCCccccCCccCceEEccCCcCCccCCcccC----CC---------CCCccccccccccC-CCCCc--cc
Q 047790 145 SNSFTG----EMPSELGDIKQLKSLDFSGNGLNGTIPSRLG----DL---------TQLQDLDLSDNLLS-GSLPV--SL 204 (885)
Q Consensus 145 ~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~l~-~~~p~--~~ 204 (885)
+|.+++ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.+|. ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 998886 3677788888899999999888644433333 33 78888888888886 33442 23
Q ss_pred ccccccccEEEeecccCcc-----cCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccc--
Q 047790 205 LKNLQSLSYLDVSNNLLSG-----NIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGP-- 277 (885)
Q Consensus 205 ~~~l~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~-- 277 (885)
+..+++|++|++++|+++. ..|..+..+++|+.|+++.|...... .+.+|..+..+++|++|+|++|++++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g-~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 261 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG-SSALAIALKSWPNLRELGLNDCLLSARGA 261 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHH-HHHHHHHGGGCTTCCEEECTTCCCCHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHH-HHHHHHHHccCCCcCEEECCCCCCchhhH
Confidence 6677888888888888762 22224444445555544433321100 123344444444455555555554433
Q ss_pred --cccccc--CCCCCcEEEccCCCCcC----cccccc-cccCCcceeeccccccC
Q 047790 278 --IPRELC--NSGSLVEINLDGNMLSG----TIEDVF-DRCTNLSELVLVNNRIS 323 (885)
Q Consensus 278 --~p~~l~--~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~Ls~N~l~ 323 (885)
+|..+. .+++|++|+|++|.+++ .++..+ ..+++|++|++++|+++
T Consensus 262 ~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 262 AAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp HHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred HHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 233331 24444444444444444 122222 33444444444444444
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-22 Score=206.11 Aligned_cols=196 Identities=15% Similarity=0.166 Sum_probs=115.0
Q ss_pred CCcEEEecCCcccccccccccCCCCCcEEEccCCC-CcCcccccccccCCcceeeccc-cccCCCCCcccCCCCceeEEe
Q 047790 263 MLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNM-LSGTIEDVFDRCTNLSELVLVN-NRISGSIPEYISELPLKVFDL 340 (885)
Q Consensus 263 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~~~L~~L~L 340 (885)
+|++|++++|++++..+..|..+++|++|++++|. ++.+.+..|..+++|++|++++ |++++.
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i--------------- 96 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYI--------------- 96 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEE---------------
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEc---------------
Confidence 56666666666665544555566666666666664 5555555555555555555555 555544
Q ss_pred ecCccccccCccccCccccceeecccccccCCCccccccccccc---EEEccCC-cccccCccccccccccc-ceecccc
Q 047790 341 QYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE---KLDLSSN-MLTRQIPKKIGNLTNIQ-ILKLNSN 415 (885)
Q Consensus 341 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N 415 (885)
.+..|.++++|++|++++|.+++ +|. |..+++|+ +|++++| ++++..+..|..+++|+ .|++++|
T Consensus 97 --------~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n 166 (239)
T 2xwt_C 97 --------DPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNN 166 (239)
T ss_dssp --------CTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSC
T ss_pred --------CHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCC
Confidence 34444445555555555555544 232 55555555 7777777 66666666677777777 7777777
Q ss_pred cccCcCCCccCCCCcccEEEcCCcc-cCcceeEEEEeecCCcccCCCchhcccC-CCCCEEeccCccccCCCCCCccccc
Q 047790 416 FFDGIIPMEFGDCISLNTLDLGSNN-LNGCVVVVYLLLNNNMLSGKIPGSLSRL-TNLTTLNLFGNLLTGSIPPEFGDSL 493 (885)
Q Consensus 416 ~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~l~l~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~ 493 (885)
+++.+.+..|.. ++|+.|++++|+ ++ +..+..|..+ ++|+.|++++|++++ +|.. .+.
T Consensus 167 ~l~~i~~~~~~~-~~L~~L~L~~n~~l~----------------~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~ 226 (239)
T 2xwt_C 167 GFTSVQGYAFNG-TKLDAVYLNKNKYLT----------------VIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLE 226 (239)
T ss_dssp CCCEECTTTTTT-CEEEEEECTTCTTCC----------------EECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCT
T ss_pred CCcccCHhhcCC-CCCCEEEcCCCCCcc----------------cCCHHHhhccccCCcEEECCCCcccc-CChh--Hhc
Confidence 776433334444 667777777663 54 1234456666 777777777777773 4433 455
Q ss_pred ccceeeeccc
Q 047790 494 KVQGLYLGHN 503 (885)
Q Consensus 494 ~L~~L~Ls~N 503 (885)
+|+.|+++++
T Consensus 227 ~L~~L~l~~~ 236 (239)
T 2xwt_C 227 HLKELIARNT 236 (239)
T ss_dssp TCSEEECTTC
T ss_pred cCceeeccCc
Confidence 6667776655
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-24 Score=239.81 Aligned_cols=257 Identities=19% Similarity=0.218 Sum_probs=164.5
Q ss_pred ccccccccCCcceeeccccccCCCCCcc----cCCC-CceeEEeecC---ccccccCccccCccccceeecccccccCCC
Q 047790 302 IEDVFDRCTNLSELVLVNNRISGSIPEY----ISEL-PLKVFDLQYN---NFTGVIPVSLWNSENLMEFNAASNLLEGSL 373 (885)
Q Consensus 302 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~~-~L~~L~Ls~N---~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 373 (885)
++..+..+++|++|+|++|++++..+.. +... .|++|+|++| ++++.+|..+.. +
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~-----------------l 86 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRL-----------------L 86 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHH-----------------H
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHH-----------------H
Confidence 3445666777888888887776543322 3233 4555555553 233333332210 0
Q ss_pred cccccccccccEEEccCCcccc----cCcccccccccccceecccccccCcCCCccCC----C---------CcccEEEc
Q 047790 374 SWEISNAVALEKLDLSSNMLTR----QIPKKIGNLTNIQILKLNSNFFDGIIPMEFGD----C---------ISLNTLDL 436 (885)
Q Consensus 374 ~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----l---------~~L~~L~L 436 (885)
...+..+++|++|+|++|++++ .+|..+..+++|++|+|++|.+++..+..+.. + ++|++|+|
T Consensus 87 ~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L 166 (386)
T 2ca6_A 87 LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIIC 166 (386)
T ss_dssp HHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEC
T ss_pred HHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEEC
Confidence 0112455666666666666665 35556666666666666666665433332222 2 78888888
Q ss_pred CCcccCcceeEEEEeecCCcccCCCc---hhcccCCCCCEEeccCcccc--C---CCCCCcccccccceeeeccccceec
Q 047790 437 GSNNLNGCVVVVYLLLNNNMLSGKIP---GSLSRLTNLTTLNLFGNLLT--G---SIPPEFGDSLKVQGLYLGHNQLTGS 508 (885)
Q Consensus 437 s~N~l~~~~~~~~l~l~~n~l~~~~p---~~l~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~g~ 508 (885)
++|+++ .+.+| ..+..+++|+.|+|++|+++ | ..|..+..+++|+.|+|++|+++..
T Consensus 167 ~~n~l~---------------~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~ 231 (386)
T 2ca6_A 167 GRNRLE---------------NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHL 231 (386)
T ss_dssp CSSCCT---------------GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHH
T ss_pred CCCCCC---------------cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcH
Confidence 888775 12333 46777888888888888887 2 3455788888889999998888611
Q ss_pred cccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhc--cCcccccccccccccCCC--
Q 047790 509 IPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPEL--GNLVQLEYLDFSMNMLDG-- 584 (885)
Q Consensus 509 ~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~--~~l~~L~~L~Ls~N~l~~-- 584 (885)
-. +.+|..+..+++|+.|+|++|+++.... ..+|..+ +.+++|++|+|++|++++
T Consensus 232 g~------------~~l~~~l~~~~~L~~L~L~~n~i~~~~~---------~~l~~~l~~~~~~~L~~L~L~~n~i~~~g 290 (386)
T 2ca6_A 232 GS------------SALAIALKSWPNLRELGLNDCLLSARGA---------AAVVDAFSKLENIGLQTLRLQYNEIELDA 290 (386)
T ss_dssp HH------------HHHHHHGGGCTTCCEEECTTCCCCHHHH---------HHHHHHHHTCSSCCCCEEECCSSCCBHHH
T ss_pred HH------------HHHHHHHccCCCcCEEECCCCCCchhhH---------HHHHHHHhhccCCCeEEEECcCCcCCHHH
Confidence 00 0226677888899999999766642100 0256777 448899999999999986
Q ss_pred --CCCccc-cCccccceeecccCcCCCCCC
Q 047790 585 --HIPEKL-CSLPYLLYLNLADNRLEGEVP 611 (885)
Q Consensus 585 --~ip~~l-~~l~~L~~L~l~~N~l~~~~p 611 (885)
.+|..+ .++++|++|++++|++++..+
T Consensus 291 ~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 291 VRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 488877 568999999999999987654
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=210.57 Aligned_cols=194 Identities=26% Similarity=0.391 Sum_probs=123.1
Q ss_pred cCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCce
Q 047790 85 FNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKS 164 (885)
Q Consensus 85 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 164 (885)
..+++|++|++++|.++. ++ .+..+++|++|+|++|++++.. . +..+++|++|+|++|.+++. +.+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~-~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLA-P-LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG-G-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCCh-h-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 345667777777777653 33 5667777777777777776433 3 66777777777777777642 35666777777
Q ss_pred EEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccc
Q 047790 165 LDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGP 244 (885)
Q Consensus 165 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 244 (885)
|++++|++++. +. +..+++|++|++++|+++ .++. +..+++|++|++++|++++.
T Consensus 112 L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~-~~~~--l~~l~~L~~L~l~~n~l~~~-------------------- 166 (308)
T 1h6u_A 112 LDLTSTQITDV-TP-LAGLSNLQVLYLDLNQIT-NISP--LAGLTNLQYLSIGNAQVSDL-------------------- 166 (308)
T ss_dssp EECTTSCCCCC-GG-GTTCTTCCEEECCSSCCC-CCGG--GGGCTTCCEEECCSSCCCCC--------------------
T ss_pred EECCCCCCCCc-hh-hcCCCCCCEEECCCCccC-cCcc--ccCCCCccEEEccCCcCCCC--------------------
Confidence 77777777643 22 666677777777777766 3433 56666666666666666521
Q ss_pred ccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCC
Q 047790 245 YQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISG 324 (885)
Q Consensus 245 ~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 324 (885)
++ +..+++|++|++++|++++..+ +..+++|++|+|++|++++..+ +..+++|+.|++++|++++
T Consensus 167 ----------~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 167 ----------TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp ----------GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred ----------hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 11 3445666677777777765433 5666677777777777766553 5666667777777666653
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.6e-23 Score=237.72 Aligned_cols=185 Identities=19% Similarity=0.183 Sum_probs=145.5
Q ss_pred eecceecccCCceEEEEEeCCCCeEEEEEecccccc--------cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 664 VFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ--------CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 664 ~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~--------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
...++||+|+||.||+|.. .++.+++|+....... ..+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467999999999999954 5677888876432211 134578999999999999999776666677788999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++++|.+++.. +..++.|++++++||| +++|+||||||+||+++. .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999875 5589999999999999 899999999999999998 99999999998875432
Q ss_pred CCc------ccCCCCCCccCCcccccC--CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 816 SHV------STDTADTIGYVPSEYGQA--GRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 816 ~~~------~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
... .....+|+.|+|||++.. ..|+..+|+|+..+-..+-..++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 111 124568999999999987 667888999999999999888887764
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=213.04 Aligned_cols=242 Identities=18% Similarity=0.158 Sum_probs=137.8
Q ss_pred cEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccE-EEee
Q 047790 139 ETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSY-LDVS 217 (885)
Q Consensus 139 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~-L~Ls 217 (885)
++++.++++++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|..+|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56777777777 6666552 467777888887775555567777777777777777765677666777766654 4455
Q ss_pred cccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccC-C
Q 047790 218 NNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDG-N 296 (885)
Q Consensus 218 ~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~-N 296 (885)
.|+++...|. .|..+++|++|++++|++++..+..+....++..+++.+ +
T Consensus 89 ~N~l~~l~~~-----------------------------~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~ 139 (350)
T 4ay9_X 89 ANNLLYINPE-----------------------------AFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNI 139 (350)
T ss_dssp ETTCCEECTT-----------------------------SBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCT
T ss_pred CCcccccCch-----------------------------hhhhccccccccccccccccCCchhhcccchhhhhhhcccc
Confidence 5666532222 234455566666666666655555555555555555543 3
Q ss_pred CCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeeccc-ccccCCCcc
Q 047790 297 MLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAAS-NLLEGSLSW 375 (885)
Q Consensus 297 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~ 375 (885)
.++.+.+..|..+.. .++.|+|++|+++.+.+..| ...+|+++++++ |.+..+.+.
T Consensus 140 ~i~~l~~~~f~~~~~----------------------~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~ 196 (350)
T 4ay9_X 140 NIHTIERNSFVGLSF----------------------ESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPND 196 (350)
T ss_dssp TCCEECTTSSTTSBS----------------------SCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTT
T ss_pred ccccccccchhhcch----------------------hhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHH
Confidence 444444444433321 24444455555443322222 233455555542 444444444
Q ss_pred cccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCc
Q 047790 376 EISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN 439 (885)
Q Consensus 376 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 439 (885)
.|.++++|++|+|++|+|+...+..|.++++|+.+++ +.++ .+| .+.++++|+.++++++
T Consensus 197 ~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 197 VFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp TTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred HhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCC
Confidence 5666667777777777776555555555555555444 2333 344 3566666777666544
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.8e-21 Score=210.68 Aligned_cols=214 Identities=15% Similarity=0.174 Sum_probs=158.0
Q ss_pred CccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCC-cccCCCCC
Q 047790 107 QVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIP-SRLGDLTQ 185 (885)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~ 185 (885)
.+..++. +.++.++++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| .+|.++++
T Consensus 5 ~~C~C~~-~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~ 80 (350)
T 4ay9_X 5 RICHCSN-RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80 (350)
T ss_dssp SSSEEET-TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTT
T ss_pred CccEeeC-CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchh
Confidence 3444543 67899999999 788876 4789999999999996666789999999999999999976655 57899998
Q ss_pred Ccc-ccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCC
Q 047790 186 LQD-LDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSML 264 (885)
Q Consensus 186 L~~-L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L 264 (885)
|++ +.++.|+++ .++...|..+++|++|++++|++++..+..+. ...++
T Consensus 81 l~~~l~~~~N~l~-~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~-----------------------------~~~~l 130 (350)
T 4ay9_X 81 LHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKI-----------------------------HSLQK 130 (350)
T ss_dssp CCEEEEEEETTCC-EECTTSBCCCTTCCEEEEEEECCSSCCCCTTC-----------------------------CBSSC
T ss_pred hhhhhcccCCccc-ccCchhhhhccccccccccccccccCCchhhc-----------------------------ccchh
Confidence 875 667789998 78778899999999999999999854333322 23346
Q ss_pred cEEEecC-CcccccccccccCCC-CCcEEEccCCCCcCcccccccccCCcceeeccc-cccCCCCCcccCCC-CceeEEe
Q 047790 265 KYISLSN-NKLSGPIPRELCNSG-SLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN-NRISGSIPEYISEL-PLKVFDL 340 (885)
Q Consensus 265 ~~L~Ls~-N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~~-~L~~L~L 340 (885)
..|++.+ ++++...+..|..+. .++.|+|++|+|+.+++.+|.. .+|++|++++ |.++...+..|..+ .|++||+
T Consensus 131 ~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~-~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdL 209 (350)
T 4ay9_X 131 VLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNG-TQLDELNLSDNNNLEELPNDVFHGASGPVILDI 209 (350)
T ss_dssp EEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTT-EEEEEEECTTCTTCCCCCTTTTTTEECCSEEEC
T ss_pred hhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccc-cchhHHhhccCCcccCCCHHHhccCcccchhhc
Confidence 6677754 567655556666664 6889999999999887777754 5688888864 55554444455555 5666666
Q ss_pred ecCccccccCccccC
Q 047790 341 QYNNFTGVIPVSLWN 355 (885)
Q Consensus 341 s~N~l~~~~p~~~~~ 355 (885)
++|+++...+..+.+
T Consensus 210 s~N~l~~lp~~~~~~ 224 (350)
T 4ay9_X 210 SRTRIHSLPSYGLEN 224 (350)
T ss_dssp TTSCCCCCCSSSCTT
T ss_pred CCCCcCccChhhhcc
Confidence 666666554444433
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.4e-21 Score=195.26 Aligned_cols=167 Identities=26% Similarity=0.282 Sum_probs=142.6
Q ss_pred CCCCCCCCCCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCC
Q 047790 43 VLSGWNKTTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGEN 122 (885)
Q Consensus 43 ~~~~w~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 122 (885)
...-|..+.+.|+|.+|.|+..+++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 8 ~~~~~~~~~~~Cs~~~v~c~~~~l~-----------~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N 74 (229)
T 3e6j_A 8 HHSAACPSQCSCSGTTVDCRSKRHA-----------SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSN 74 (229)
T ss_dssp ---CCCCTTCEEETTEEECTTSCCS-----------SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred hhhccCCCCCEEeCCEeEccCCCcC-----------ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCC
Confidence 3445667889999999999765432 4555443 88999999999999988999999999999999999
Q ss_pred cCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCc
Q 047790 123 QLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPV 202 (885)
Q Consensus 123 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 202 (885)
+|+...+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+++ .+|.
T Consensus 75 ~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~~~~ 152 (229)
T 3e6j_A 75 QLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPH 152 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC-CCCT
T ss_pred CCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC-ccCH
Confidence 998666677899999999999999999777778899999999999999999 78888999999999999999998 6777
Q ss_pred ccccccccccEEEeecccCccc
Q 047790 203 SLLKNLQSLSYLDVSNNLLSGN 224 (885)
Q Consensus 203 ~~~~~l~~L~~L~Ls~N~l~~~ 224 (885)
..+..+++|++|++++|.+...
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTT
T ss_pred HHHhCCCCCCEEEeeCCCccCC
Confidence 7789999999999999998743
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.84 E-value=3e-21 Score=222.28 Aligned_cols=190 Identities=23% Similarity=0.322 Sum_probs=100.2
Q ss_pred CcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccC
Q 047790 311 NLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSS 390 (885)
Q Consensus 311 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 390 (885)
+|+.|+|++|.+++ +|..+. ..|++|+|++|+++. +| ..+++|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~-~~L~~L~Ls~N~l~~-ip---------------------------~~l~~L~~L~Ls~ 109 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP-PQITVLEITQNALIS-LP---------------------------ELPASLEYLDACD 109 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC-TTCSEEECCSSCCSC-CC---------------------------CCCTTCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhHc-CCCCEEECcCCCCcc-cc---------------------------cccCCCCEEEccC
Confidence 67777777777765 333221 245555555555552 22 1234455555555
Q ss_pred CcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCC
Q 047790 391 NMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTN 470 (885)
Q Consensus 391 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~ 470 (885)
|+|++ +|. +.. +|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|. .+++
T Consensus 110 N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~-----------------~lp~---~l~~ 161 (571)
T 3cvr_A 110 NRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLT-----------------MLPE---LPTS 161 (571)
T ss_dssp SCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS-----------------CCCC---CCTT
T ss_pred CCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccC-----------------cCCC---cCCC
Confidence 55554 333 333 55555555555554 333 3455566666555554 2333 3455
Q ss_pred CCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccc-----cccCcEEEccCCCC
Q 047790 471 LTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGN-----LNGLTHLDLSCNEL 545 (885)
Q Consensus 471 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~-----l~~L~~L~Ls~N~l 545 (885)
|+.|+|++|+|++ +|. |. .+|+.|+|++|+|+ .+ |. |.. .+.|+.|+|++|+|
T Consensus 162 L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l----------------p~-~~~~L~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 162 LEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL----------------PA-VPVRNHHSEETEIFFRCRENRI 219 (571)
T ss_dssp CCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC----------------CC-CC--------CCEEEECCSSCC
T ss_pred cCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch----------------hh-HHHhhhcccccceEEecCCCcc
Confidence 6666666666654 444 44 55666666666655 22 22 221 12226666665544
Q ss_pred CCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCcc
Q 047790 546 DGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLP 594 (885)
Q Consensus 546 ~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~ 594 (885)
+ .||..+..+++|++|+|++|+|++.+|..+..++
T Consensus 220 ~--------------~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 220 T--------------HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp C--------------CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred e--------------ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 4 4566666666666666666666666666655543
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=190.17 Aligned_cols=163 Identities=26% Similarity=0.252 Sum_probs=120.5
Q ss_pred ccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCC
Q 047790 381 VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGK 460 (885)
Q Consensus 381 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~ 460 (885)
++|++|++++|++++..+..|..+++|++|++++|+++++.+..|..+++|++|++++|+++ +.
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~----------------~~ 91 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ----------------SL 91 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC----------------CC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC----------------cc
Confidence 36777777777777666666777788888888888887766666777888888888877774 23
Q ss_pred CchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEc
Q 047790 461 IPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDL 540 (885)
Q Consensus 461 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~L 540 (885)
.+..+..+++|++|++++|++++..+..|..+++|+.|++++|++++.. +..|..+++|+.|+|
T Consensus 92 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~----------------~~~~~~l~~L~~L~l 155 (208)
T 2o6s_A 92 PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVP----------------DGVFDRLTSLQYIWL 155 (208)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC----------------TTTTTTCTTCCEEEC
T ss_pred CHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeC----------------HHHhccCCCccEEEe
Confidence 3445677888888888888888666666778888888888888877432 445777888888888
Q ss_pred cCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccc
Q 047790 541 SCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPY 595 (885)
Q Consensus 541 s~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~ 595 (885)
++|++. +.+++|++|+++.|+++|.+|.+++.++.
T Consensus 156 ~~N~~~--------------------~~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 156 HDNPWD--------------------CTCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CSCCBC--------------------CCTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred cCCCee--------------------cCCCCHHHHHHHHHhCCceeeccCccccC
Confidence 866543 23567888888888888888888877664
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=192.94 Aligned_cols=190 Identities=24% Similarity=0.331 Sum_probs=138.2
Q ss_pred cceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCC
Q 047790 359 LMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGS 438 (885)
Q Consensus 359 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 438 (885)
+..+.+..+.+.... .+..+++|+.|++++|.++.. + .+..+++|+.|+|++|++++..+ +..+++|++|++++
T Consensus 26 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 344445555544332 245677788888888888754 3 47778888888888888886554 78888888888888
Q ss_pred cccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccC
Q 047790 439 NNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSG 518 (885)
Q Consensus 439 N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~ 518 (885)
|+++ .+| .+..+++|+.|++++|++++. +.+..+++|+.|++++|++++
T Consensus 100 n~l~-----------------~~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~----------- 148 (291)
T 1h6t_A 100 NKVK-----------------DLS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD----------- 148 (291)
T ss_dssp SCCC-----------------CGG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCC-----------
T ss_pred CcCC-----------------CCh-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCc-----------
Confidence 8875 223 377788888888888888753 457788888888888888773
Q ss_pred CccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccce
Q 047790 519 NKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLY 598 (885)
Q Consensus 519 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~ 598 (885)
+ ..++.+++|+.|+|++|+++ .+++ +..+++|++|++++|++++ +| .+..+++|+.
T Consensus 149 ------~-~~l~~l~~L~~L~L~~N~l~--------------~~~~-l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~ 204 (291)
T 1h6t_A 149 ------I-TVLSRLTKLDTLSLEDNQIS--------------DIVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDV 204 (291)
T ss_dssp ------C-GGGGGCTTCSEEECCSSCCC--------------CCGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSE
T ss_pred ------c-hhhccCCCCCEEEccCCccc--------------cchh-hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 1 45778888888888866665 2333 7788888888888888874 55 4788888888
Q ss_pred eecccCcCCCC
Q 047790 599 LNLADNRLEGE 609 (885)
Q Consensus 599 L~l~~N~l~~~ 609 (885)
|++++|+++..
T Consensus 205 L~l~~n~i~~~ 215 (291)
T 1h6t_A 205 LELFSQECLNK 215 (291)
T ss_dssp EEEEEEEEECC
T ss_pred EECcCCcccCC
Confidence 88888888763
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-20 Score=196.69 Aligned_cols=144 Identities=14% Similarity=0.070 Sum_probs=115.6
Q ss_pred EEeecceecccCCceEEEEEeCCCCeEEEEEecccccc------------------cHHHHHHHHHHhcccCCCCcccee
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ------------------CDREFAAEMETLDMVKHQNLVQLL 723 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~------------------~~~~~~~E~~~l~~l~~~~i~~~~ 723 (885)
.|.+.+.||+|+||.||+|.+.+++.||+|+++..... ....+.+|++++++++ | +++.
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~ 167 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP 167 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence 35677999999999999999977999999998643211 2356889999999998 4 6666
Q ss_pred eeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEe
Q 047790 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVS 803 (885)
Q Consensus 724 ~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~ 803 (885)
+++.. +..|+||||++|++|.+ +.. .....++.|++.|++||| +.||+||||||+||+++ ++.+||+
T Consensus 168 ~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 168 KVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp CEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TTEEEEC
T ss_pred eEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCcEEEE
Confidence 65543 55699999999999988 421 124579999999999999 99999999999999999 9999999
Q ss_pred eccCcccccCCCCCcccCCCCCCccCCccccc
Q 047790 804 DFGLARLISDCESHVSTDTADTIGYVPSEYGQ 835 (885)
Q Consensus 804 Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~ 835 (885)
|||.|... ..+.|||++.
T Consensus 235 DFG~a~~~--------------~~~~a~e~l~ 252 (282)
T 1zar_A 235 DFPQSVEV--------------GEEGWREILE 252 (282)
T ss_dssp CCTTCEET--------------TSTTHHHHHH
T ss_pred ECCCCeEC--------------CCCCHHHHHH
Confidence 99998643 2356788754
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=184.66 Aligned_cols=156 Identities=22% Similarity=0.277 Sum_probs=131.7
Q ss_pred CcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccc
Q 047790 53 HCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQL 132 (885)
Q Consensus 53 ~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~ 132 (885)
.|.|..|.|... +++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|+|++..|..|
T Consensus 10 ~C~~~~v~c~~~----------~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~ 76 (220)
T 2v9t_B 10 TCSNNIVDCRGK----------GLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAF 76 (220)
T ss_dssp EEETTEEECTTS----------CCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTT
T ss_pred EECCCEEEcCCC----------CcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHh
Confidence 366766666543 333 3555443 689999999999988777789999999999999999998888999
Q ss_pred cccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCccccccccccc
Q 047790 133 GLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLS 212 (885)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~ 212 (885)
..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+++ .++...|..+++|+
T Consensus 77 ~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~ 155 (220)
T 2v9t_B 77 QGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGTFSPLRAIQ 155 (220)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCC
T ss_pred hCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC-EECHHHHhCCCCCC
Confidence 99999999999999999666667889999999999999999888889999999999999999998 67767788899999
Q ss_pred EEEeecccCc
Q 047790 213 YLDVSNNLLS 222 (885)
Q Consensus 213 ~L~Ls~N~l~ 222 (885)
+|++++|++.
T Consensus 156 ~L~L~~N~~~ 165 (220)
T 2v9t_B 156 TMHLAQNPFI 165 (220)
T ss_dssp EEECCSSCEE
T ss_pred EEEeCCCCcC
Confidence 9999999886
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=212.12 Aligned_cols=193 Identities=22% Similarity=0.304 Sum_probs=129.6
Q ss_pred CCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEc
Q 047790 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDF 167 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 167 (885)
..+..++|+.+.+.+..+ +..|++|+.|+|++|.+.. +| .+..+++|++|+|++|.+++..| +..+++|+.|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 334556666666654332 5667777777777777763 34 47777788888888887775444 777778888888
Q ss_pred cCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccc
Q 047790 168 SGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQL 247 (885)
Q Consensus 168 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 247 (885)
++|+|++ +| .+..+++|++|+|++|+++ .++. +..+++|+.|+|++|++++. .
T Consensus 95 s~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~-~l~~--l~~l~~L~~L~Ls~N~l~~l--~-------------------- 147 (605)
T 1m9s_A 95 DENKIKD-LS-SLKDLKKLKSLSLEHNGIS-DING--LVHLPQLESLYLGNNKITDI--T-------------------- 147 (605)
T ss_dssp CSSCCCC-CT-TSTTCTTCCEEECTTSCCC-CCGG--GGGCTTCSEEECCSSCCCCC--G--------------------
T ss_pred cCCCCCC-Ch-hhccCCCCCEEEecCCCCC-CCcc--ccCCCccCEEECCCCccCCc--h--------------------
Confidence 8887774 33 5777778888888888877 4432 67777888888888777632 1
Q ss_pred cccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCC
Q 047790 248 SLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSI 326 (885)
Q Consensus 248 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 326 (885)
.+..+++|+.|+|++|++++..| +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++.+..
T Consensus 148 ---------~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 148 ---------VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp ---------GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred ---------hhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 23445566677777777765555 66677777777777777664 23666777777777777766543
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.1e-20 Score=201.41 Aligned_cols=152 Identities=26% Similarity=0.282 Sum_probs=86.5
Q ss_pred cEEEccCCcccccCcccccccccccceecccccccCcCCCccC-CCCcccEEEcCCcccCcceeEEEEeecCCcccCCCc
Q 047790 384 EKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG-DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP 462 (885)
Q Consensus 384 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p 462 (885)
+.+++++|+++. +|..+. +.++.|+|++|+|+++.+..|. .+++|++|+|++|+|+ +..|
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~----------------~i~~ 81 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN----------------FISS 81 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC----------------EECT
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCC----------------ccCh
Confidence 456666666653 444332 2456666666666665555565 6666666666666654 2233
Q ss_pred hhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccC
Q 047790 463 GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSC 542 (885)
Q Consensus 463 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 542 (885)
..|.++++|+.|+|++|+|++..+..|..+.+|+.|+|++|++++.. |..|..+++|+.|+|++
T Consensus 82 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~----------------~~~~~~l~~L~~L~L~~ 145 (361)
T 2xot_A 82 EAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVD----------------RNAFEDMAQLQKLYLSQ 145 (361)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC----------------TTTTTTCTTCCEEECCS
T ss_pred hhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEEC----------------HHHhCCcccCCEEECCC
Confidence 45666666666666666666555555666666666666666665432 45556666666666665
Q ss_pred CCCCCceeeeecccccccccchhc----cCcccccccccccccCCC
Q 047790 543 NELDGIVGLYVQSNKFYGEIPPEL----GNLVQLEYLDFSMNMLDG 584 (885)
Q Consensus 543 N~l~~~~~l~~~~n~l~g~ip~~~----~~l~~L~~L~Ls~N~l~~ 584 (885)
|+|+ .+|..+ ..+++|++|||++|+|++
T Consensus 146 N~l~--------------~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 146 NQIS--------------RFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCC--------------SCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCC--------------eeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 5544 223222 345566666666666653
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-20 Score=226.20 Aligned_cols=203 Identities=20% Similarity=0.241 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHhCCC--CCCCCCCC-CCCCCcccCCccccCCcEEEEEEecccccccccccccCCCCCCE-----Ee
Q 047790 23 EPKQERRSLVHFKNSLQN--PQVLSGWN-KTTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRI-----LD 94 (885)
Q Consensus 23 ~~~~~~~aLl~~k~~~~~--~~~~~~w~-~~~~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~-----L~ 94 (885)
....+|++|+++..+... ...-..|. ..+..+.|.++.+...+++.+++..+++.. ++..+.....|+. ++
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~ 207 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDD 207 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCc-chhhHhhcCccCcccccCcc
Confidence 456788999999988743 23344563 345678899999999999999999888876 3433333222222 22
Q ss_pred cCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCc
Q 047790 95 LSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNG 174 (885)
Q Consensus 95 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 174 (885)
++.|.+. ..+..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|+.+++|++|+|++|+|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 3333333 45778899999999999999998 78888889999999999999999 88999999999999999999999
Q ss_pred cCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCC
Q 047790 175 TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNL 232 (885)
Q Consensus 175 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 232 (885)
.+|..|+++++|++|+|++|.|+ .+|.. |..+++|++|+|++|++++.+|..+..+
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWE-FGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSS-TTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChh-hhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 77999999999999999999997 88887 8899999999999999998888776543
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=184.38 Aligned_cols=157 Identities=20% Similarity=0.208 Sum_probs=101.7
Q ss_pred ceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCC
Q 047790 409 ILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE 488 (885)
Q Consensus 409 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 488 (885)
.+++++|.++. +|..+. ..+++|+|++|+|++.. .+..|..+++|+.|+|++|++++..+..
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~---------------~~~~~~~l~~L~~L~L~~N~i~~i~~~~ 76 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLE---------------ATGIFKKLPQLRKINFSNNKITDIEEGA 76 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEEC---------------CCCCGGGCTTCCEEECCSSCCCEECTTT
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccC---------------chhhhccCCCCCEEECCCCcCCEECHHH
Confidence 45555555553 343332 23456666666554210 1234566667777777777777666666
Q ss_pred cccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccC
Q 047790 489 FGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGN 568 (885)
Q Consensus 489 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~ 568 (885)
|..+++|+.|+|++|++++.. |..|..+++|+.|+|++|++ ++..|..+..
T Consensus 77 ~~~l~~L~~L~Ls~N~l~~~~----------------~~~~~~l~~L~~L~Ls~N~l-------------~~~~~~~~~~ 127 (220)
T 2v70_A 77 FEGASGVNEILLTSNRLENVQ----------------HKMFKGLESLKTLMLRSNRI-------------TCVGNDSFIG 127 (220)
T ss_dssp TTTCTTCCEEECCSSCCCCCC----------------GGGGTTCSSCCEEECTTSCC-------------CCBCTTSSTT
T ss_pred hCCCCCCCEEECCCCccCccC----------------HhHhcCCcCCCEEECCCCcC-------------CeECHhHcCC
Confidence 777777777777777776433 45577777777777774444 3345667777
Q ss_pred cccccccccccccCCCCCCccccCccccceeecccCcCCCCCCC
Q 047790 569 LVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPR 612 (885)
Q Consensus 569 l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~ 612 (885)
+++|++|+|++|++++..|..+..+++|++|++++|++.+..+.
T Consensus 128 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 128 LSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred CccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 88888888888888877777888888888888888887765543
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.9e-19 Score=179.92 Aligned_cols=148 Identities=25% Similarity=0.367 Sum_probs=106.5
Q ss_pred CCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEE
Q 047790 460 KIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLD 539 (885)
Q Consensus 460 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~ 539 (885)
.+|..+. ++|+.|+|++|++++..+..|..+++|+.|+|++|++++.. |.+|..+++|+.|+
T Consensus 25 ~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~----------------~~~~~~l~~L~~L~ 86 (220)
T 2v9t_B 25 EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELA----------------PDAFQGLRSLNSLV 86 (220)
T ss_dssp SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEEC----------------TTTTTTCSSCCEEE
T ss_pred cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcC----------------HHHhhCCcCCCEEE
Confidence 4455443 56777777777777666667777777777777777777543 66777777788888
Q ss_pred ccCCCCCCceeeeecccccccccch-hccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCC-Ccccc
Q 047790 540 LSCNELDGIVGLYVQSNKFYGEIPP-ELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPR-SGICQ 617 (885)
Q Consensus 540 Ls~N~l~~~~~l~~~~n~l~g~ip~-~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~-~~~~~ 617 (885)
|++|+++ .+|. .|..+++|++|+|++|++++..|..+..+++|++|+|++|++++.++. ...+.
T Consensus 87 Ls~N~l~--------------~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 152 (220)
T 2v9t_B 87 LYGNKIT--------------ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 152 (220)
T ss_dssp CCSSCCC--------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred CCCCcCC--------------ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCC
Confidence 8766555 3333 356778888888888888877777777888888888888888776654 34566
Q ss_pred ccccccccCCccccccccCCcccccccc
Q 047790 618 NLSIISLTGNKDLCEKIMGSDCQILTFG 645 (885)
Q Consensus 618 ~~~~~~~~~N~~~c~~~~~~~c~~~~~~ 645 (885)
+++.+++.+|||.| +|...|+.
T Consensus 153 ~L~~L~L~~N~~~c------~c~l~~l~ 174 (220)
T 2v9t_B 153 AIQTMHLAQNPFIC------DCHLKWLA 174 (220)
T ss_dssp TCCEEECCSSCEEC------SGGGHHHH
T ss_pred CCCEEEeCCCCcCC------CCccHHHH
Confidence 77788888888888 78887754
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.5e-19 Score=197.02 Aligned_cols=175 Identities=28% Similarity=0.287 Sum_probs=147.6
Q ss_pred EEEecccccccccccccCCCCCCEEecCCCcccCcCCcCcc-CcCCCCEEeccCCcCCCCCCccccccccccEeeeeccC
Q 047790 69 LVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVS-NLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNS 147 (885)
Q Consensus 69 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 147 (885)
+++++++++ .+|..+. +.+++|+|++|.+++..+..+. .+++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 23 l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 99 (361)
T 2xot_A 23 LSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99 (361)
T ss_dssp EECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCc
Confidence 455556665 3666553 4589999999999988888888 99999999999999998888889999999999999999
Q ss_pred CCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccc---cccccccEEEeecccCccc
Q 047790 148 FTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL---KNLQSLSYLDVSNNLLSGN 224 (885)
Q Consensus 148 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~l~~L~~L~Ls~N~l~~~ 224 (885)
|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+++ .+|...| ..+++|++|+|++|+|++.
T Consensus 100 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 100 LHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred CCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 99877888999999999999999999888999999999999999999998 7888877 5799999999999999965
Q ss_pred CCccccCCCcc--cceecccccccc
Q 047790 225 IPPEIGNLKKL--SDLYLGIGPYQL 247 (885)
Q Consensus 225 ~p~~~~~l~~L--~~L~l~~n~~~~ 247 (885)
.+..+..++.+ +.|+++.|++.+
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CHHHhhhccHhhcceEEecCCCccC
Confidence 55666666653 566666665544
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.7e-21 Score=222.06 Aligned_cols=110 Identities=31% Similarity=0.341 Sum_probs=85.4
Q ss_pred CCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCce
Q 047790 470 NLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIV 549 (885)
Q Consensus 470 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 549 (885)
.|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-----------------~lp~~~~~l~~L~~L~Ls~N~l~--- 499 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-----------------ALPPALAALRCLEVLQASDNALE--- 499 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-----------------CCCGGGGGCTTCCEEECCSSCCC---
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-----------------ccchhhhcCCCCCEEECCCCCCC---
Confidence 47788888888875 565 888888888888888877 33677888888888888865554
Q ss_pred eeeecccccccccchhccCcccccccccccccCCCCC-CccccCccccceeecccCcCCCCCCCC
Q 047790 550 GLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHI-PEKLCSLPYLLYLNLADNRLEGEVPRS 613 (885)
Q Consensus 550 ~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~i-p~~l~~l~~L~~L~l~~N~l~~~~p~~ 613 (885)
.+| .++++++|++|+|++|+|++.+ |..++.+++|++|+|++|++++.+|..
T Consensus 500 -----------~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 500 -----------NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp -----------CCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred -----------CCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 356 7788888888888888888766 888888888888888888888876654
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.8e-19 Score=178.43 Aligned_cols=152 Identities=18% Similarity=0.201 Sum_probs=122.3
Q ss_pred EEEEecccccccccccccCCCCCCEEecCCCcccCcCC-cCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeecc
Q 047790 68 SLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLS-PQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSN 146 (885)
Q Consensus 68 ~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 146 (885)
.++++++.++ .+|..+. +.+++|+|++|.+++..+ ..|+.+++|++|+|++|+|++..|..|+.+++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 3444555555 3666553 346889999999887755 45788999999999999998777778889999999999999
Q ss_pred CCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcc
Q 047790 147 SFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSG 223 (885)
Q Consensus 147 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 223 (885)
++++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+++ .++...|..+++|++|++++|.+++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT-TVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCC-CBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCC-EECHHHhcCCCCCCEEEecCcCCcC
Confidence 998777778888999999999999998888888888999999999999988 4544458888888899998888874
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6.2e-19 Score=205.47 Aligned_cols=141 Identities=25% Similarity=0.286 Sum_probs=63.8
Q ss_pred EEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccc
Q 047790 338 FDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFF 417 (885)
Q Consensus 338 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 417 (885)
+.++.+.+....+ +..+++|+.|++++|.+.... .+..+++|+.|+|++|++++..| +..+++|+.|+|++|.|
T Consensus 26 l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l 99 (605)
T 1m9s_A 26 DNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKI 99 (605)
T ss_dssp HHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred HhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCC
Confidence 3344444443322 234445555555555544321 24445555555555555544333 44455555555555555
Q ss_pred cCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccce
Q 047790 418 DGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQG 497 (885)
Q Consensus 418 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 497 (885)
++. | .+..+++|+.|+|++|+++ .+ ..+..+++|+.|+|++|++++. +.+..+++|+.
T Consensus 100 ~~l-~-~l~~l~~L~~L~Ls~N~l~-----------------~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~ 157 (605)
T 1m9s_A 100 KDL-S-SLKDLKKLKSLSLEHNGIS-----------------DI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDT 157 (605)
T ss_dssp CCC-T-TSTTCTTCCEEECTTSCCC-----------------CC-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSE
T ss_pred CCC-h-hhccCCCCCEEEecCCCCC-----------------CC-ccccCCCccCEEECCCCccCCc--hhhcccCCCCE
Confidence 431 2 3444455555555544443 11 2244444555555555544432 33444444444
Q ss_pred eeeccccce
Q 047790 498 LYLGHNQLT 506 (885)
Q Consensus 498 L~Ls~N~l~ 506 (885)
|+|++|+++
T Consensus 158 L~Ls~N~l~ 166 (605)
T 1m9s_A 158 LSLEDNQIS 166 (605)
T ss_dssp EECCSSCCC
T ss_pred EECcCCcCC
Confidence 444444444
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.5e-21 Score=224.32 Aligned_cols=106 Identities=23% Similarity=0.243 Sum_probs=69.3
Q ss_pred ccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCc
Q 047790 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP 462 (885)
Q Consensus 383 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p 462 (885)
|+.|+|++|+|++ +|. ++.+++|+.|+|++|+|+ .+|..|..+++|+.|+|++|+|+ .+|
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-----------------~lp 502 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-----------------NVD 502 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-----------------CCG
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCC-----------------CCc
Confidence 6666666666664 344 666666666777766666 45666666666777766666664 245
Q ss_pred hhcccCCCCCEEeccCccccCCC-CCCcccccccceeeeccccceecc
Q 047790 463 GSLSRLTNLTTLNLFGNLLTGSI-PPEFGDSLKVQGLYLGHNQLTGSI 509 (885)
Q Consensus 463 ~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g~~ 509 (885)
.++.+++|+.|+|++|+|++.. |..++.+++|+.|+|++|++++.+
T Consensus 503 -~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 503 -GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp -GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred -ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 5666667777777777776555 666666777777777777666543
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.77 E-value=9.2e-19 Score=183.13 Aligned_cols=170 Identities=23% Similarity=0.295 Sum_probs=96.8
Q ss_pred cccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccC
Q 047790 380 AVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSG 459 (885)
Q Consensus 380 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~ 459 (885)
+.+++.+++++|.+++.. .+..+++|+.|++++|.++. +| .+..+++|++|+|++|+++
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~----------------- 76 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQIS----------------- 76 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCC-----------------
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccC-----------------
Confidence 344555555555555322 34555556666666665553 23 4555566666666665554
Q ss_pred CCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEE
Q 047790 460 KIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLD 539 (885)
Q Consensus 460 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~ 539 (885)
.+|. +..+++|+.|+|++|++++ +|.... .+|+.|++++|++++ ...+..+++|+.|+
T Consensus 77 ~~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~------------------~~~l~~l~~L~~L~ 134 (263)
T 1xeu_A 77 DLSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD------------------TDSLIHLKNLEILS 134 (263)
T ss_dssp CCGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB------------------SGGGTTCTTCCEEE
T ss_pred CChh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEccCCccCC------------------ChhhcCcccccEEE
Confidence 2222 5556666666666666653 333222 566666666666653 12356666667777
Q ss_pred ccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCC
Q 047790 540 LSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGE 609 (885)
Q Consensus 540 Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~ 609 (885)
|++|+++ .+| .++.+++|++|+|++|++++. ..+..+++|++|++++|++++.
T Consensus 135 Ls~N~i~--------------~~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLK--------------SIV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCC--------------BCG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCC--------------CCh-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 6655554 223 456666777777777777643 5566677777777777776654
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-18 Score=184.06 Aligned_cols=84 Identities=24% Similarity=0.328 Sum_probs=42.5
Q ss_pred ccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCccc
Q 047790 353 LWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLN 432 (885)
Q Consensus 353 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 432 (885)
+..+++|++|++++|.+.+. ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..| +..+++|+
T Consensus 108 l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~ 181 (291)
T 1h6t_A 108 LKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQ 181 (291)
T ss_dssp GTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCC
T ss_pred hccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccC
Confidence 44444444455544444432 2344555555555555555543 345555555555555555554333 55555555
Q ss_pred EEEcCCcccC
Q 047790 433 TLDLGSNNLN 442 (885)
Q Consensus 433 ~L~Ls~N~l~ 442 (885)
.|++++|+++
T Consensus 182 ~L~L~~N~i~ 191 (291)
T 1h6t_A 182 NLYLSKNHIS 191 (291)
T ss_dssp EEECCSSCCC
T ss_pred EEECCCCcCC
Confidence 5555555553
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.8e-18 Score=173.20 Aligned_cols=150 Identities=22% Similarity=0.289 Sum_probs=126.1
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
+.++.+++.++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 45788888885 5666554 89999999999999988999999999999999999998666677899999999999999
Q ss_pred cCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccc
Q 047790 171 GLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPY 245 (885)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~ 245 (885)
+|++..+..|..+++|++|+|++|+++ .+|.. +..+++|++|+|++|++++..+..+..+++|+.|++++|++
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 171 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRG-IERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPW 171 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTT-GGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCB
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcc-cccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCc
Confidence 999877788899999999999999998 88877 68899999999999999865555566665555555554443
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-18 Score=173.78 Aligned_cols=155 Identities=19% Similarity=0.257 Sum_probs=121.4
Q ss_pred ccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCcc
Q 047790 401 IGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNL 480 (885)
Q Consensus 401 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 480 (885)
...+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~------------------~~~~l~~l~~L~~L~l~~n~ 99 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT------------------NYNPISGLSNLERLRIMGKD 99 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS------------------CCGGGTTCTTCCEEEEECTT
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC------------------cchhhhcCCCCCEEEeECCc
Confidence 356777888888888887 345 5777888888888888663 23467788889999999999
Q ss_pred ccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCC-CCCceeeeecccccc
Q 047790 481 LTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNE-LDGIVGLYVQSNKFY 559 (885)
Q Consensus 481 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~l~~~~n~l~ 559 (885)
+++..|..+..+++|+.|++++|++++.. |..++.+++|+.|+|++|+ ++
T Consensus 100 l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~----------------~~~l~~l~~L~~L~L~~n~~i~------------- 150 (197)
T 4ezg_A 100 VTSDKIPNLSGLTSLTLLDISHSAHDDSI----------------LTKINTLPKVNSIDLSYNGAIT------------- 150 (197)
T ss_dssp CBGGGSCCCTTCTTCCEEECCSSBCBGGG----------------HHHHTTCSSCCEEECCSCTBCC-------------
T ss_pred cCcccChhhcCCCCCCEEEecCCccCcHh----------------HHHHhhCCCCCEEEccCCCCcc-------------
Confidence 88777888888999999999999888644 6678888999999999776 44
Q ss_pred cccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCC
Q 047790 560 GEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEG 608 (885)
Q Consensus 560 g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~ 608 (885)
.+| .+..+++|++|++++|++++ +| .+..+++|++|++++|++.+
T Consensus 151 -~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 151 -DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp -CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred -ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 455 68889999999999999984 55 78889999999999999754
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.8e-19 Score=211.09 Aligned_cols=118 Identities=27% Similarity=0.324 Sum_probs=74.4
Q ss_pred CcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEee
Q 047790 373 LSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLL 452 (885)
Q Consensus 373 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l 452 (885)
.+..|..+..|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|..+++|++|+|++|+|+
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~---------- 283 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT---------- 283 (727)
T ss_dssp ------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS----------
T ss_pred ChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC----------
Confidence 3445556666666666666665 45555556667777777777766 56666666777777777666664
Q ss_pred cCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccc
Q 047790 453 NNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIP 510 (885)
Q Consensus 453 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 510 (885)
.+|..|..+++|++|+|++|.|+ .+|..|+.+.+|+.|+|++|+|+|.+|
T Consensus 284 -------~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p 333 (727)
T 4b8c_D 284 -------SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFL 333 (727)
T ss_dssp -------SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHH
T ss_pred -------ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCCh
Confidence 55666666777777777777665 566667777777777777777666554
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-18 Score=181.26 Aligned_cols=124 Identities=23% Similarity=0.338 Sum_probs=72.0
Q ss_pred CCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEE
Q 047790 87 LSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLD 166 (885)
Q Consensus 87 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 166 (885)
+.+++.+++++|.+++.. .+..+++|++|++++|+++ .+| .++.+++|++|+|++|++++..| +..+++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 445556666666665432 4566666666666666666 344 46666666666666666664333 66666666666
Q ss_pred ccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCc
Q 047790 167 FSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 167 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
|++|++++ +|. +.. ++|++|+|++|+++ .++. +..+++|++|++++|+++
T Consensus 92 L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~-~~~~--l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 92 VNRNRLKN-LNG-IPS-ACLSRLFLDNNELR-DTDS--LIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp CCSSCCSC-CTT-CCC-SSCCEEECCSSCCS-BSGG--GTTCTTCCEEECTTSCCC
T ss_pred CCCCccCC-cCc-ccc-CcccEEEccCCccC-CChh--hcCcccccEEECCCCcCC
Confidence 66666663 232 222 56666666666665 3331 555555555555555554
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.6e-18 Score=169.70 Aligned_cols=131 Identities=20% Similarity=0.301 Sum_probs=77.1
Q ss_pred cCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCce
Q 047790 85 FNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKS 164 (885)
Q Consensus 85 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 164 (885)
..+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|.+++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34555666666666665 333 4666666666666666554 2235556666666666666666555566666666666
Q ss_pred EEccCCcCCccCCcccCCCCCCccccccccc-cCCCCCcccccccccccEEEeecccCc
Q 047790 165 LDFSGNGLNGTIPSRLGDLTQLQDLDLSDNL-LSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 165 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
|++++|++++..|..+..+++|++|++++|. ++ .+| .+..+++|++|++++|+++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~--~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM--PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG--GGGGCSSCCEEECTTBCCC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH--hhcCCCCCCEEECCCCCCc
Confidence 6666666665555556666666666666665 43 444 2555566666666666554
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.72 E-value=5.3e-18 Score=168.32 Aligned_cols=179 Identities=22% Similarity=0.245 Sum_probs=101.4
Q ss_pred cceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCch-hcccCCCCCEEeccCccccCCCC
Q 047790 408 QILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPG-SLSRLTNLTTLNLFGNLLTGSIP 486 (885)
Q Consensus 408 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p 486 (885)
+.+++++|.++ .+|..+.. +|++|++++|+|++ ..+. .+..+++|++|+|++|++++..|
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~----------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 71 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGR----------------ISSDGLFGRLPHLVKLELKRNQLTGIEP 71 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCS----------------BCCSCSGGGCTTCCEEECCSSCCCCBCT
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCc----------------cCCccccccCCCCCEEECCCCCCCCcCH
Confidence 56777777774 77765543 77777777666641 2222 36677777777777777776667
Q ss_pred CCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhc
Q 047790 487 PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPEL 566 (885)
Q Consensus 487 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~ 566 (885)
..|.++++|+.|+|++|++++.. |..|..+++|+.|+|++|+ +++.+|..+
T Consensus 72 ~~~~~l~~L~~L~Ls~N~l~~~~----------------~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~ 122 (192)
T 1w8a_A 72 NAFEGASHIQELQLGENKIKEIS----------------NKMFLGLHQLKTLNLYDNQ-------------ISCVMPGSF 122 (192)
T ss_dssp TTTTTCTTCCEEECCSCCCCEEC----------------SSSSTTCTTCCEEECCSSC-------------CCEECTTSS
T ss_pred hHcCCcccCCEEECCCCcCCccC----------------HHHhcCCCCCCEEECCCCc-------------CCeeCHHHh
Confidence 77777777777777777776543 4556666777777776333 334456666
Q ss_pred cCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccccccccccccCCccccccccCC
Q 047790 567 GNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMGS 637 (885)
Q Consensus 567 ~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~~~ 637 (885)
+.+++|++|+|++|++++..+... -...++...+..+...+..|. .++.....++..+...|..+...
T Consensus 123 ~~l~~L~~L~L~~N~l~c~c~l~~-~~~~l~~~~~~~~~~~C~~P~--~l~~~~l~~l~~~~~~C~~~~~~ 190 (192)
T 1w8a_A 123 EHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGAPS--KVRDVQIKDLPHSEFKCSSENSE 190 (192)
T ss_dssp TTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCSST--TTTTSBGGGSCTTTCCCCCC---
T ss_pred hcCCCCCEEEeCCCCccCcCcchH-HHHHHHHcCCCCCCCCCCCCh--HHcCCChhhCcHhhcCcCCCCCC
Confidence 667777777777777765543211 111223333334433332232 22333444555555566544433
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-18 Score=188.30 Aligned_cols=291 Identities=11% Similarity=0.094 Sum_probs=147.6
Q ss_pred ccccccccC--CCCCCEEecCCCcccCcCCcCccC-cCCCCEEeccCCcCC--CCCCccccccccccEeeeeccCCCCCC
Q 047790 78 GPVSPFLFN--LSSLRILDLSKNLLFGQLSPQVSN-LKRLKMLSVGENQLS--GSIPSQLGLLTRLETISLRSNSFTGEM 152 (885)
Q Consensus 78 g~~~~~l~~--l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 152 (885)
|.++..+.. +.+++.|+++++- ...-...+.. +++|+.|||++|+|. ...+. .++.++.+.+..|.| .
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I---~ 85 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFV---P 85 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEE---C
T ss_pred CcHHhhccchhhCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCccc---ccccccccccccccc---C
Confidence 344443333 5567777776541 1111112222 566777777777766 21111 222244444444422 2
Q ss_pred CccccC--------CccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccC---
Q 047790 153 PSELGD--------IKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLL--- 221 (885)
Q Consensus 153 p~~l~~--------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l--- 221 (885)
+.+|.+ +++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.++ .++..+|.++.++.++.+..+..
T Consensus 86 ~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~~~~~~~~ 163 (329)
T 3sb4_A 86 AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLGSSDAYRF 163 (329)
T ss_dssp TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTTCTHHHHT
T ss_pred HHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCcchhhhhc
Confidence 234445 67777777766 666555566777777777777777666 66666666666565555444211
Q ss_pred -cccCCccccCCCccc-ceecccccccccccccccCccc----cCCCCCcEEEecCCcccccccccc-cCCCCCcEEEcc
Q 047790 222 -SGNIPPEIGNLKKLS-DLYLGIGPYQLSLFVGRITPEI----GNCSMLKYISLSNNKLSGPIPREL-CNSGSLVEINLD 294 (885)
Q Consensus 222 -~~~~p~~~~~l~~L~-~L~l~~n~~~~~~~~~~~~~~l----~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~L~ 294 (885)
.......|.++..|+ .+.+.. .+.++..+ -...+++.+.+.++-.. .....+ ..+++|+.++|+
T Consensus 164 ~~~i~~~~f~~~~~L~~~i~~~~--------~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~ 234 (329)
T 3sb4_A 164 KNRWEHFAFIEGEPLETTIQVGA--------MGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDIS 234 (329)
T ss_dssp STTTTTSCEEESCCCEEEEEECT--------TCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECT
T ss_pred cccccccccccccccceeEEecC--------CCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECC
Confidence 111122333333333 122210 01111110 11233444444433211 111111 124455555555
Q ss_pred CCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccc-eeecccccccCCC
Q 047790 295 GNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLM-EFNAASNLLEGSL 373 (885)
Q Consensus 295 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~ 373 (885)
+|+++.+++.+|.++++|+.++|.+| ++.+.+.+|.++.+|+ .+++.+ .+..+.
T Consensus 235 ~n~i~~I~~~aF~~~~~L~~l~l~~n------------------------i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~ 289 (329)
T 3sb4_A 235 KTNATTIPDFTFAQKKYLLKIKLPHN------------------------LKTIGQRVFSNCGRLAGTLELPA-SVTAIE 289 (329)
T ss_dssp TBCCCEECTTTTTTCTTCCEEECCTT------------------------CCEECTTTTTTCTTCCEEEEECT-TCCEEC
T ss_pred CCCcceecHhhhhCCCCCCEEECCcc------------------------cceehHHHhhCChhccEEEEEcc-cceEEc
Confidence 55555555555555555555555444 3334455566666666 666665 555556
Q ss_pred cccccccccccEEEccCCcccccCccccccccccccee
Q 047790 374 SWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILK 411 (885)
Q Consensus 374 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 411 (885)
+.+|.++++|+.+++++|+++.+.+.+|.++++|+.++
T Consensus 290 ~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 290 FGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred hhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 66777777777777777777777777777777777765
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.2e-18 Score=185.72 Aligned_cols=291 Identities=12% Similarity=0.076 Sum_probs=194.8
Q ss_pred CcCCCCEEeccCCcCCCCCCccccc-cccccEeeeeccCCC--CCCCccccCCccCceEEccCCcCCccCCcccCC----
Q 047790 110 NLKRLKMLSVGENQLSGSIPSQLGL-LTRLETISLRSNSFT--GEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGD---- 182 (885)
Q Consensus 110 ~l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~---- 182 (885)
.+.+++.|.++++ +...--..+.. +++|++|||++|++. ...+. .++.++.+.+..|. +.+.+|.+
T Consensus 23 ~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~---I~~~aF~~~~~~ 95 (329)
T 3sb4_A 23 EANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANF---VPAYAFSNVVNG 95 (329)
T ss_dssp HHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTE---ECTTTTEEEETT
T ss_pred hhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccc---cCHHHhcccccc
Confidence 3778999999875 22111123333 778999999999998 22222 23335666666664 33456777
Q ss_pred ----CCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccccccccc-Ccc
Q 047790 183 ----LTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRI-TPE 257 (885)
Q Consensus 183 ----l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~-~~~ 257 (885)
+++|+.|+|.+ .++ .|+..+|.++++|+.|++++|.++...+..|.++.++..+..+.+..... ...+ ...
T Consensus 96 ~~~g~~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~--~~~i~~~~ 171 (329)
T 3sb4_A 96 VTKGKQTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRF--KNRWEHFA 171 (329)
T ss_dssp EEEECTTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHT--STTTTTSC
T ss_pred cccccCCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhc--cccccccc
Confidence 99999999999 887 89999999999999999999999877777888777666665532111000 0001 112
Q ss_pred ccCCCCCc-EEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccC-CCCc
Q 047790 258 IGNCSMLK-YISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYIS-ELPL 335 (885)
Q Consensus 258 l~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~L 335 (885)
+.++..|+ .+.+.... .++..+. ...-...++..+.+.++-.......... ...|
T Consensus 172 f~~~~~L~~~i~~~~~~---~l~~~~~--------------------~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L 228 (329)
T 3sb4_A 172 FIEGEPLETTIQVGAMG---KLEDEIM--------------------KAGLQPRDINFLTIEGKLDNADFKLIRDYMPNL 228 (329)
T ss_dssp EEESCCCEEEEEECTTC---CHHHHHH--------------------HTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTC
T ss_pred cccccccceeEEecCCC---cHHHHHh--------------------hcccCccccceEEEeeeecHHHHHHHHHhcCCC
Confidence 33444444 33333211 1111110 0000123333333333211000000000 1256
Q ss_pred eeEEeecCccccccCccccCccccceeecccccccCCCccccccccccc-EEEccCCcccccCcccccccccccceeccc
Q 047790 336 KVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALE-KLDLSSNMLTRQIPKKIGNLTNIQILKLNS 414 (885)
Q Consensus 336 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 414 (885)
+.+++++|+++...+..|.++.+|+.+++.+| +..+.+.+|.++.+|+ .+++.+ .++.+.+.+|.++++|+.++++.
T Consensus 229 ~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~ 306 (329)
T 3sb4_A 229 VSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATG 306 (329)
T ss_dssp CEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECS
T ss_pred eEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCC
Confidence 77777777777777788999999999999998 8888899999999999 999999 88888889999999999999999
Q ss_pred ccccCcCCCccCCCCcccEEEc
Q 047790 415 NFFDGIIPMEFGDCISLNTLDL 436 (885)
Q Consensus 415 N~l~~~~p~~~~~l~~L~~L~L 436 (885)
|+++.+.+..|.++++|+.++.
T Consensus 307 n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 307 DKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp SCCCEECTTTTCTTCCCCEEEC
T ss_pred CccCccchhhhcCCcchhhhcc
Confidence 9999888899999999999874
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.71 E-value=2.9e-17 Score=162.98 Aligned_cols=128 Identities=29% Similarity=0.365 Sum_probs=90.8
Q ss_pred cEEEccCCcccccCcccccccccccceecccccccCcCCC-ccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCc
Q 047790 384 EKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPM-EFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP 462 (885)
Q Consensus 384 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p 462 (885)
+.+++++|+++ .+|..+.. +|+.|+|++|+|+++.+. .|..+++|++|+|++|+|+ +..|
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~----------------~~~~ 71 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT----------------GIEP 71 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCC----------------CBCT
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCC----------------CcCH
Confidence 67777777775 45554433 777777777777766554 4777777777777777764 3456
Q ss_pred hhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccC
Q 047790 463 GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSC 542 (885)
Q Consensus 463 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 542 (885)
..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++.+ |..|..+++|+.|+|++
T Consensus 72 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----------------~~~~~~l~~L~~L~L~~ 135 (192)
T 1w8a_A 72 NAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVM----------------PGSFEHLNSLTSLNLAS 135 (192)
T ss_dssp TTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEEC----------------TTSSTTCTTCCEEECTT
T ss_pred hHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeC----------------HHHhhcCCCCCEEEeCC
Confidence 77777777777777777777777777777777777777777777654 56677777777777775
Q ss_pred CCCC
Q 047790 543 NELD 546 (885)
Q Consensus 543 N~l~ 546 (885)
|+++
T Consensus 136 N~l~ 139 (192)
T 1w8a_A 136 NPFN 139 (192)
T ss_dssp CCBC
T ss_pred CCcc
Confidence 5543
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.69 E-value=6.4e-17 Score=156.94 Aligned_cols=134 Identities=26% Similarity=0.301 Sum_probs=115.6
Q ss_pred CCCCCCEEecCCCccc-CcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCce
Q 047790 86 NLSSLRILDLSKNLLF-GQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKS 164 (885)
Q Consensus 86 ~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 164 (885)
..++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999998 78888889999999999999999865 78889999999999999999778888888999999
Q ss_pred EEccCCcCCccC-CcccCCCCCCccccccccccCCCCCc---ccccccccccEEEeecccCc
Q 047790 165 LDFSGNGLNGTI-PSRLGDLTQLQDLDLSDNLLSGSLPV---SLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 165 L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~~l~~L~~L~Ls~N~l~ 222 (885)
|+|++|++++.. +..+..+++|++|++++|.++ .+|. ..+..+++|++|++++|.+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~-~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVT-NLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG-TSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCc-chHHHHHHHHHhCccCcEecCCCCChh
Confidence 999999998542 267889999999999999998 5665 46888999999999999886
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=7.5e-17 Score=168.05 Aligned_cols=138 Identities=22% Similarity=0.224 Sum_probs=107.6
Q ss_pred EEeecceecccCCceEEEEEe-CCCCe--EEEEEecccccc------------------------cHHHHHHHHHHhccc
Q 047790 662 IIVFENVIGGGGFRTAFKGTM-PDQKT--VAVKKLSQATGQ------------------------CDREFAAEMETLDMV 714 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~-~~~~~--valK~~~~~~~~------------------------~~~~~~~E~~~l~~l 714 (885)
.|++.+.||+|+||.||+|.+ .+|+. ||+|+++..... ....+.+|+++++.+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 478899999999999999988 67888 999987543111 013678899999999
Q ss_pred CCCCc--cceeeeeEeCCeeEEEEecccC-C----CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCC
Q 047790 715 KHQNL--VQLLGYCSVGEEKLLVYEYMVN-G----SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDI 787 (885)
Q Consensus 715 ~~~~i--~~~~~~~~~~~~~~lv~e~~~~-~----sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dl 787 (885)
.|+++ +.++++ ...++||||+.+ | +|.++... .++..+..++.|++.++++||. +.||+||||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDl 197 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADL 197 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCC
Confidence 88764 333332 356899999942 3 77776542 2234577899999999999994 579999999
Q ss_pred CCCcEEEcCCCcEEEeeccCcccc
Q 047790 788 KTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 788 kp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
||+||++++ .++|+|||.|...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 8999999999764
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.4e-16 Score=154.23 Aligned_cols=135 Identities=24% Similarity=0.273 Sum_probs=80.5
Q ss_pred CCcccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCcc
Q 047790 52 RHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQ 131 (885)
Q Consensus 52 ~~c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~ 131 (885)
..|+|.++.|+..+++ .+|..+ .++|++|+|++|.+++..+..|+.+++|++|+|++|++++..+..
T Consensus 5 C~C~~~~l~~~~~~l~-----------~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 5 CSCSGTEIRCNSKGLT-----------SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp CEEETTEEECCSSCCS-----------SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred CEeCCCEEEecCCCCc-----------cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 3477888888654322 233322 256677777777766555555666666666666666666554555
Q ss_pred ccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCC
Q 047790 132 LGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGS 199 (885)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 199 (885)
|+.+++|++|+|++|++++..+..+..+++|++|++++|++++..+..|..+++|++|+|++|.+++.
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 56666666666666666655555556666666666666666644444455566666666666665543
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.5e-16 Score=154.34 Aligned_cols=126 Identities=25% Similarity=0.326 Sum_probs=85.7
Q ss_pred EEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCc
Q 047790 92 ILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNG 171 (885)
Q Consensus 92 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 171 (885)
++++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4555555554 3444432 46677777777776 566667777777777777777776666667777777777777777
Q ss_pred CCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCc
Q 047790 172 LNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 172 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
|++..|.+|.++++|++|+|++|+++ .+|...|..+++|++|++++|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCee
Confidence 77666666777777777777777776 666666777777777777777765
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.65 E-value=7.5e-17 Score=152.97 Aligned_cols=129 Identities=26% Similarity=0.341 Sum_probs=102.7
Q ss_pred CCCCCEEecCCCccc-CcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceE
Q 047790 87 LSSLRILDLSKNLLF-GQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSL 165 (885)
Q Consensus 87 l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 165 (885)
.++|++|++++|.++ +.+|..++.+++|++|++++|.+++. ..++.+++|++|+|++|.+++.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888888887 67888888888888888888888865 678888888888888888887677777778888888
Q ss_pred EccCCcCCcc-CCcccCCCCCCccccccccccCCCCCc---ccccccccccEEEeec
Q 047790 166 DFSGNGLNGT-IPSRLGDLTQLQDLDLSDNLLSGSLPV---SLLKNLQSLSYLDVSN 218 (885)
Q Consensus 166 ~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~~l~~L~~L~Ls~ 218 (885)
++++|++++. .+..+..+++|++|++++|.++ .+|. ..+..+++|++|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT-NLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG-GSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCccc-chHHHHHHHHHHCCCcccccCCC
Confidence 8888888853 3467788888888888888887 4554 4577788888887753
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.6e-16 Score=155.03 Aligned_cols=135 Identities=28% Similarity=0.317 Sum_probs=88.3
Q ss_pred CEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceee
Q 047790 472 TTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGL 551 (885)
Q Consensus 472 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l 551 (885)
+.+++++|.++ .+|..+. .+|+.|++++|+++ .+|..|..+++|+.|+|++|+++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-----------------~ip~~~~~l~~L~~L~Ls~N~i~----- 67 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-----------------LVPKELSNYKHLTLIDLSNNRIS----- 67 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-----------------SCCGGGGGCTTCCEEECCSSCCC-----
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-----------------hhHHHhhcccCCCEEECCCCcCC-----
Confidence 45666666666 4555443 35666777776665 33566667777777777754443
Q ss_pred eecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCC-CccccccccccccCCccc
Q 047790 552 YVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPR-SGICQNLSIISLTGNKDL 630 (885)
Q Consensus 552 ~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~N~~~ 630 (885)
+..|..|.++++|++|+|++|+|++..|..+..+++|++|+|++|+|++.++. ...+.+++.+++.+|||.
T Consensus 68 --------~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 68 --------TLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp --------CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred --------EeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 23345566777777777777777766666677777777777777777765543 345566777778888888
Q ss_pred cccccCCcccccccc
Q 047790 631 CEKIMGSDCQILTFG 645 (885)
Q Consensus 631 c~~~~~~~c~~~~~~ 645 (885)
| +|...|+.
T Consensus 140 C------~c~l~~l~ 148 (193)
T 2wfh_A 140 C------DCNMQWLS 148 (193)
T ss_dssp C------SGGGHHHH
T ss_pred c------CCcCHHHH
Confidence 8 78777654
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.5e-16 Score=152.75 Aligned_cols=137 Identities=25% Similarity=0.263 Sum_probs=123.8
Q ss_pred CcEEEEEEeccccc-ccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEee
Q 047790 64 SRVVSLVIQTQSLK-GPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETIS 142 (885)
Q Consensus 64 ~~v~~l~l~~~~l~-g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 142 (885)
.+++.|+++++.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 46899999999998 88999999999999999999999876 8899999999999999999988898888899999999
Q ss_pred eeccCCCCCC-CccccCCccCceEEccCCcCCccCC---cccCCCCCCccccccccccCCCCCcc
Q 047790 143 LRSNSFTGEM-PSELGDIKQLKSLDFSGNGLNGTIP---SRLGDLTQLQDLDLSDNLLSGSLPVS 203 (885)
Q Consensus 143 Ls~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p~~ 203 (885)
|++|.+++.. +..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+. ++|..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 9999999642 2789999999999999999996555 48999999999999999998 77754
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-15 Score=148.70 Aligned_cols=132 Identities=21% Similarity=0.234 Sum_probs=115.4
Q ss_pred CCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccC
Q 047790 90 LRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSG 169 (885)
Q Consensus 90 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 169 (885)
.+.+++++|.++. +|..+. ++|++|++++|++++..+..|+.+++|++|++++|++++..+..|+.+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3678899998864 554443 7899999999999977777889999999999999999977777889999999999999
Q ss_pred CcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccC
Q 047790 170 NGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNI 225 (885)
Q Consensus 170 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~ 225 (885)
|++++..+..|..+++|++|++++|+++ .+|...+..+++|++|++++|++++..
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccC
Confidence 9999877778899999999999999998 788887899999999999999998644
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.60 E-value=5.4e-16 Score=147.02 Aligned_cols=127 Identities=24% Similarity=0.276 Sum_probs=106.2
Q ss_pred cCCCCEEeccCCcCC-CCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccc
Q 047790 111 LKRLKMLSVGENQLS-GSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDL 189 (885)
Q Consensus 111 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 189 (885)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 78898889999999999999999865 788899999999999999997788888889999999
Q ss_pred cccccccCCCCC-cccccccccccEEEeecccCcccCC---ccccCCCcccceec
Q 047790 190 DLSDNLLSGSLP-VSLLKNLQSLSYLDVSNNLLSGNIP---PEIGNLKKLSDLYL 240 (885)
Q Consensus 190 ~Ls~N~l~~~~p-~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l 240 (885)
++++|+++ .+| ...+..+++|++|++++|++++..+ ..+..+++|+.|++
T Consensus 94 ~ls~N~i~-~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 94 NLSGNKIK-DLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp ECTTSCCC-SHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred ECCCCcCC-ChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 99999998 444 2448889999999999999986544 35666666666554
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.58 E-value=2.6e-14 Score=158.23 Aligned_cols=87 Identities=11% Similarity=0.113 Sum_probs=39.8
Q ss_pred CccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCC
Q 047790 350 PVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCI 429 (885)
Q Consensus 350 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 429 (885)
+..|.++++|+.+.+. +.+..+...+|.++++|+.++|.+| ++.+.+.+|.++ +|+.+++++|.+....+..|.+++
T Consensus 293 ~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~ 369 (401)
T 4fdw_A 293 PYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFP 369 (401)
T ss_dssp TTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSC
T ss_pred HHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCC
Confidence 3444444455555544 2244444444555555555555333 433444445544 455555555544444444444442
Q ss_pred -cccEEEcCCc
Q 047790 430 -SLNTLDLGSN 439 (885)
Q Consensus 430 -~L~~L~Ls~N 439 (885)
+++.|++-.+
T Consensus 370 ~~l~~l~vp~~ 380 (401)
T 4fdw_A 370 DDITVIRVPAE 380 (401)
T ss_dssp TTCCEEEECGG
T ss_pred CCccEEEeCHH
Confidence 3444444443
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.4e-17 Score=163.55 Aligned_cols=156 Identities=25% Similarity=0.281 Sum_probs=104.6
Q ss_pred ccccccccceecccccccCcCCC------ccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEE
Q 047790 401 IGNLTNIQILKLNSNFFDGIIPM------EFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTL 474 (885)
Q Consensus 401 ~~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L 474 (885)
+.....++.++++.|.+++..|. .+..+++|++|++++|+++ .+| .+..+++|+.|
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~-----------------~l~-~~~~l~~L~~L 75 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-----------------KIS-SLSGMENLRIL 75 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEES-----------------CCC-CHHHHTTCCEE
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCc-----------------ccc-ccccCCCCCEE
Confidence 44456677777777777776665 6677777777777777664 345 66677777777
Q ss_pred eccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeec
Q 047790 475 NLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQ 554 (885)
Q Consensus 475 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~ 554 (885)
++++|+++ .+|..+..+++|+.|++++|++++ + | .+..+++|+.|+|++|+++.+.
T Consensus 76 ~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l----------------~-~~~~l~~L~~L~l~~N~i~~~~----- 131 (198)
T 1ds9_A 76 SLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L----------------S-GIEKLVNLRVLYMSNNKITNWG----- 131 (198)
T ss_dssp EEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-H----------------H-HHHHHHHSSEEEESEEECCCHH-----
T ss_pred ECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-C----------------C-ccccCCCCCEEECCCCcCCchh-----
Confidence 77777777 566666666777777777777763 1 3 4667777777777766554221
Q ss_pred ccccccccchhccCcccccccccccccCCCCCCcc----------ccCccccceeecccCcCC
Q 047790 555 SNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEK----------LCSLPYLLYLNLADNRLE 607 (885)
Q Consensus 555 ~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~----------l~~l~~L~~L~l~~N~l~ 607 (885)
.+..+..+++|++|++++|++++.+|.. +..+++|++|| +|+++
T Consensus 132 -------~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 132 -------EIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp -------HHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred -------HHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 0135677777777777777777665543 66677777776 56654
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.56 E-value=2.1e-15 Score=147.33 Aligned_cols=134 Identities=18% Similarity=0.181 Sum_probs=96.1
Q ss_pred cccCCCCCCEEecCCCcccCcCCcCccCcC-CCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCcc
Q 047790 83 FLFNLSSLRILDLSKNLLFGQLSPQVSNLK-RLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQ 161 (885)
Q Consensus 83 ~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 161 (885)
.+.+.++|++|+|++|.++. +| .+..+. +|++|+|++|+|++. ..|+.+++|++|+|++|.+++..|..++.+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 45667788888888888774 33 355554 788888888888754 56777888888888888887544445577788
Q ss_pred CceEEccCCcCCccCCc--ccCCCCCCccccccccccCCCCCcc---cccccccccEEEeecccCc
Q 047790 162 LKSLDFSGNGLNGTIPS--RLGDLTQLQDLDLSDNLLSGSLPVS---LLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 162 L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~---~~~~l~~L~~L~Ls~N~l~ 222 (885)
|++|+|++|+|+ .+|. .+..+++|++|++++|.++ .+|.. .+..+++|++||+++|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 888888888876 4454 6777777888888888776 56654 4667777777777777664
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.56 E-value=5.3e-15 Score=159.47 Aligned_cols=138 Identities=12% Similarity=0.025 Sum_probs=101.2
Q ss_pred EEeecceecccCCceEEEEEeCCCCeEEEEEecccccc--------------cHH--------HHHHHHHHhcccCCCCc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ--------------CDR--------EFAAEMETLDMVKHQNL 719 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~--------------~~~--------~~~~E~~~l~~l~~~~i 719 (885)
.|.+.++||+|++|.||+|...+|+.||+|+++..... ... ....|.+.+.++.+..+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 38999999999999999999999999999987532100 001 12356777777755544
Q ss_pred cceeeeeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-
Q 047790 720 VQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF- 798 (885)
Q Consensus 720 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~- 798 (885)
....-+.. ...++||||++|+++.++.. . .....++.|++.++.++| +.|||||||||.||++++++
T Consensus 176 ~vp~p~~~--~~~~LVME~i~G~~L~~l~~-----~--~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 176 PVPEPIAQ--SRHTIVMSLVDALPMRQVSS-----V--PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp SCCCEEEE--ETTEEEEECCSCEEGGGCCC-----C--SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEEC
T ss_pred CCCeeeec--cCceEEEEecCCccHhhhcc-----c--HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCC
Confidence 32222222 22479999999888755332 1 134568899999999999 89999999999999998766
Q ss_pred ---------cEEEeeccCcccc
Q 047790 799 ---------EAKVSDFGLARLI 811 (885)
Q Consensus 799 ---------~vkl~Dfg~a~~~ 811 (885)
.+.|+||+-+...
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEET
T ss_pred cccccccccceEEEEeCCcccC
Confidence 3899999987554
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.55 E-value=8.6e-14 Score=154.04 Aligned_cols=265 Identities=12% Similarity=0.128 Sum_probs=121.4
Q ss_pred CCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEc
Q 047790 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDF 167 (885)
Q Consensus 88 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 167 (885)
..++.+.+..+ ++.....+|.++ +|+.+.+..+ ++..-..+|.+ .+|+.+++.. .++...+.+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 34444444332 222333344443 4555554443 33233334443 2344444443 333333344444444555555
Q ss_pred cCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccc
Q 047790 168 SGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQL 247 (885)
Q Consensus 168 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 247 (885)
++|+++.....+|. .++|+.+.|..+ ++ .++..+|.++++|+.+++.+| ++......
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~a------------------- 244 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEA------------------- 244 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTT-------------------
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCccccc-------------------
Confidence 44444433333333 244444444422 33 444444444444444444432 22111111
Q ss_pred cccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCc-----CcccccccccCCcceeecccccc
Q 047790 248 SLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLS-----GTIEDVFDRCTNLSELVLVNNRI 322 (885)
Q Consensus 248 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l 322 (885)
|.+ .+|+.+.+. +.++...+..|.++.+|+.+++.+|.+. .+.+.+|.++++|+.+.+.+ .+
T Consensus 245 ----------F~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i 311 (401)
T 4fdw_A 245 ----------FRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SI 311 (401)
T ss_dssp ----------TTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TC
T ss_pred ----------ccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ce
Confidence 222 345555552 3344344455555555555555555443 34455555565555555552 23
Q ss_pred CCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCccccc
Q 047790 323 SGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIG 402 (885)
Q Consensus 323 ~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 402 (885)
+. ....+|.++.+|+.+.+..| +..+...+|.++ +|+.+++++|.+....+..|.
T Consensus 312 ~~-----------------------I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~ 366 (401)
T 4fdw_A 312 RI-----------------------LGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWY 366 (401)
T ss_dssp CE-----------------------ECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCC
T ss_pred EE-----------------------EhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCccccccccc
Confidence 32 33344444455555555332 344444555555 566666666665555555555
Q ss_pred ccc-cccceeccccccc
Q 047790 403 NLT-NIQILKLNSNFFD 418 (885)
Q Consensus 403 ~l~-~L~~L~Ls~N~l~ 418 (885)
+++ +++.|++..+.+.
T Consensus 367 ~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 367 GFPDDITVIRVPAESVE 383 (401)
T ss_dssp CSCTTCCEEEECGGGHH
T ss_pred CCCCCccEEEeCHHHHH
Confidence 553 5566666555543
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.5e-15 Score=144.37 Aligned_cols=134 Identities=19% Similarity=0.237 Sum_probs=99.0
Q ss_pred ccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccC-CCCCEEeccCccccCCCCCCcccccccceeeecc
Q 047790 424 EFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRL-TNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGH 502 (885)
Q Consensus 424 ~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 502 (885)
.+.++.+|+.|++++|+++ .+|. +..+ ++|+.|++++|.+++. +.+..+++|+.|++++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-----------------~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~ 73 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-----------------VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNN 73 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-----------------SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCS
T ss_pred hcCCcCCceEEEeeCCCCc-----------------hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCC
Confidence 4556677777777777775 3333 3333 3788888888888754 5678888888888888
Q ss_pred ccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccch--hccCcccccccccccc
Q 047790 503 NQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPP--ELGNLVQLEYLDFSMN 580 (885)
Q Consensus 503 N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~--~~~~l~~L~~L~Ls~N 580 (885)
|++++.. |..|..+++|+.|+|++|+++ .+|. .++.+++|++|++++|
T Consensus 74 N~l~~~~----------------~~~~~~l~~L~~L~L~~N~i~--------------~~~~~~~l~~l~~L~~L~l~~N 123 (176)
T 1a9n_A 74 NRICRIG----------------EGLDQALPDLTELILTNNSLV--------------ELGDLDPLASLKSLTYLCILRN 123 (176)
T ss_dssp SCCCEEC----------------SCHHHHCTTCCEEECCSCCCC--------------CGGGGGGGGGCTTCCEEECCSS
T ss_pred CcccccC----------------cchhhcCCCCCEEECCCCcCC--------------cchhhHhhhcCCCCCEEEecCC
Confidence 8887432 344578888888888877665 4555 7788888999999999
Q ss_pred cCCCCCCcc----ccCccccceeecccCcCCC
Q 047790 581 MLDGHIPEK----LCSLPYLLYLNLADNRLEG 608 (885)
Q Consensus 581 ~l~~~ip~~----l~~l~~L~~L~l~~N~l~~ 608 (885)
+++ .+|.. +..+++|++||+++|.+..
T Consensus 124 ~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 124 PVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp GGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 887 56764 7888889999998887653
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3.5e-17 Score=163.43 Aligned_cols=137 Identities=23% Similarity=0.262 Sum_probs=96.8
Q ss_pred ccCCCCCCEEecCCCcccCcCCc------CccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCcccc
Q 047790 84 LFNLSSLRILDLSKNLLFGQLSP------QVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELG 157 (885)
Q Consensus 84 l~~l~~L~~L~Ls~n~l~~~~~~------~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 157 (885)
+.....++.++++.+.+++.+|+ .++.+++|++|+|++|++++ +| .+..+++|++|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34455666667777777766665 67777777777777777775 56 7777777777777777777 5666666
Q ss_pred CCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCc-ccccccccccEEEeecccCcccCC
Q 047790 158 DIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPV-SLLKNLQSLSYLDVSNNLLSGNIP 226 (885)
Q Consensus 158 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~l~~L~~L~Ls~N~l~~~~p 226 (885)
.+++|++|+|++|++++ +| .+..+++|++|++++|+++ .+|. ..+..+++|++|++++|++++..|
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC-CHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC-chhHHHHHhcCCCCCEEEecCCccccccc
Confidence 77777777777777774 34 4677777777777777776 4443 346777778888888877765444
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.7e-13 Score=152.46 Aligned_cols=218 Identities=20% Similarity=0.190 Sum_probs=122.5
Q ss_pred cccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCce
Q 047790 257 EIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLK 336 (885)
Q Consensus 257 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~ 336 (885)
.|.++++|+.+.+.++..+ .....|.++.+|+.+++..| ++.+...+|..+..|+.+.+.++... .....+....|+
T Consensus 157 aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~-i~~~~~~~~~l~ 233 (394)
T 4fs7_A 157 AFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY-LGDFALSKTGVK 233 (394)
T ss_dssp TTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-ECTTTTTTCCCC
T ss_pred hhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE-eehhhcccCCCc
Confidence 4667778888888765433 55567778888888888766 66667777888888888877766432 222233333566
Q ss_pred eEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceeccccc
Q 047790 337 VFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNF 416 (885)
Q Consensus 337 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 416 (885)
.+.+.. .++......|..+..++.+.+..+... .....|.....++.+....+.+ ....|..+.+|+.+.+..+
T Consensus 234 ~i~ip~-~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~- 307 (394)
T 4fs7_A 234 NIIIPD-SFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS- 307 (394)
T ss_dssp EEEECT-TCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-
T ss_pred eEEECC-CceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-
Confidence 666643 233344455566666666666554322 3344455555666655555433 2234555556666655443
Q ss_pred ccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccc
Q 047790 417 FDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQ 496 (885)
Q Consensus 417 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 496 (885)
++.+....|.++.+|+.+++.++ ++ ..-..+|.++++|+.+++..| ++..-..+|.++.+|+
T Consensus 308 i~~I~~~aF~~c~~L~~i~lp~~-v~----------------~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~ 369 (394)
T 4fs7_A 308 VKFIGEEAFESCTSLVSIDLPYL-VE----------------EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLK 369 (394)
T ss_dssp CCEECTTTTTTCTTCCEECCCTT-CC----------------EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCC
T ss_pred cceechhhhcCCCCCCEEEeCCc-cc----------------EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCC
Confidence 44444455566666666655432 22 112344555555666655544 4433344555555555
Q ss_pred eeeec
Q 047790 497 GLYLG 501 (885)
Q Consensus 497 ~L~Ls 501 (885)
.+++.
T Consensus 370 ~i~lp 374 (394)
T 4fs7_A 370 KVELP 374 (394)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 55554
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.4e-13 Score=151.18 Aligned_cols=307 Identities=13% Similarity=0.105 Sum_probs=138.5
Q ss_pred ccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCc
Q 047790 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLK 163 (885)
Q Consensus 84 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 163 (885)
+.++++|+.+.|..+ ++.....+|.++++|+.++|.++ ++..-...|.++++|+.+.+..+ ++.....+|.....++
T Consensus 67 F~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~ 143 (394)
T 4fs7_A 67 FQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKE 143 (394)
T ss_dssp TTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSE
T ss_pred hhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccc
Confidence 445566666666532 44444455666666666666543 33233345555666665555433 2223334444443322
Q ss_pred eEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccc
Q 047790 164 SLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIG 243 (885)
Q Consensus 164 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 243 (885)
...... +......+|.++++|+.+.+.++. . .++...|.++.+|+.+++..| ++......+.++..|+.+.+
T Consensus 144 ~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~--- 215 (394)
T 4fs7_A 144 ITIPEG--VTVIGDEAFATCESLEYVSLPDSM-E-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEF--- 215 (394)
T ss_dssp EECCTT--CCEECTTTTTTCTTCCEEECCTTC-C-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCC---
T ss_pred cccCcc--ccccchhhhcccCCCcEEecCCcc-c-eeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeec---
Confidence 222221 121233455566666666665442 2 455555566666666655544 33233344444444444443
Q ss_pred cccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccC
Q 047790 244 PYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323 (885)
Q Consensus 244 ~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 323 (885)
..+... +........+|+.+.+..+ ++.+...+|..+..|+.+.+..+...
T Consensus 216 --------------------------~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~ 266 (394)
T 4fs7_A 216 --------------------------PNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR 266 (394)
T ss_dssp --------------------------CTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE
T ss_pred --------------------------CCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce
Confidence 333221 1122222334444444322 23333444555555555555444221
Q ss_pred CCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCccccc
Q 047790 324 GSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIG 402 (885)
Q Consensus 324 ~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 402 (885)
.....+... .++.+....+. .....|..+.+|+.+.+..+ +..+...+|.++.+|+.++|.++ ++.+...+|.
T Consensus 267 -i~~~~F~~~~~l~~~~~~~~~---i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 340 (394)
T 4fs7_A 267 -IGGSLFYNCSGLKKVIYGSVI---VPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFR 340 (394)
T ss_dssp -ECSCTTTTCTTCCEEEECSSE---ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTT
T ss_pred -eeccccccccccceeccCcee---eccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhcc
Confidence 222222222 23333332221 11233444455555554433 33333444555555555555432 4444445555
Q ss_pred ccccccceecccccccCcCCCccCCCCcccEEEcC
Q 047790 403 NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLG 437 (885)
Q Consensus 403 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 437 (885)
++++|+.+++..| ++.+-..+|.++.+|+.+++.
T Consensus 341 ~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 341 GCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp TCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred CCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 5555555555444 444444455555555555554
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-13 Score=132.88 Aligned_cols=104 Identities=21% Similarity=0.273 Sum_probs=60.3
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
+.+|+++|.++. +|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 345555555543 444332 55666666666666555556666666666666666666554555556666666666666
Q ss_pred cCCccCCcccCCCCCCccccccccccC
Q 047790 171 GLNGTIPSRLGDLTQLQDLDLSDNLLS 197 (885)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 197 (885)
+|++..+..|.++++|++|+|++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 666544445556666666666666555
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.47 E-value=1.4e-13 Score=133.31 Aligned_cols=107 Identities=29% Similarity=0.368 Sum_probs=96.1
Q ss_pred CCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCcccccc
Q 047790 113 RLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLS 192 (885)
Q Consensus 113 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 192 (885)
..+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578999999999 5787664 889999999999998889999999999999999999998777788999999999999
Q ss_pred ccccCCCCCcccccccccccEEEeecccCcc
Q 047790 193 DNLLSGSLPVSLLKNLQSLSYLDVSNNLLSG 223 (885)
Q Consensus 193 ~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~ 223 (885)
+|+|+ .+|...|..+++|++|+|++|+++.
T Consensus 87 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 87 DNQLK-SIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CCccC-EeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 99998 6777779999999999999999874
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.2e-13 Score=132.34 Aligned_cols=104 Identities=19% Similarity=0.273 Sum_probs=62.7
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45777777763 4555443 56666666666666655666666666666666666666544444556666666666666
Q ss_pred cCCccCCcccCCCCCCccccccccccC
Q 047790 171 GLNGTIPSRLGDLTQLQDLDLSDNLLS 197 (885)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 197 (885)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666444444555666666666666555
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.8e-13 Score=130.64 Aligned_cols=104 Identities=30% Similarity=0.428 Sum_probs=59.6
Q ss_pred CEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCcccccccc
Q 047790 115 KMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194 (885)
Q Consensus 115 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 194 (885)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45566666654 4555443 55666666666666555555666666666666666665444444555666666666666
Q ss_pred ccCCCCCcccccccccccEEEeecccCc
Q 047790 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 195 ~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
+|+ .+|...|..+++|++|+|++|++.
T Consensus 92 ~l~-~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLK-SIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccc-eeCHHHhccccCCCEEEeCCCCcc
Confidence 665 455544555666666666666555
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.31 E-value=2.2e-12 Score=140.84 Aligned_cols=108 Identities=20% Similarity=0.254 Sum_probs=50.5
Q ss_pred cccCCccccCCcEEEEEEecccccccccccccCCCCCCEEecCC-CcccCcCCcCccCcCCCCEEeccCCcCCCCCCccc
Q 047790 54 CHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSK-NLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQL 132 (885)
Q Consensus 54 c~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~ 132 (885)
|.|.+|.|... ++++ .+|. +..+++|++|+|++ |.+++..+..|++|++|++|+|++|+|++..|..|
T Consensus 8 C~~~~v~~~~~---------n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 76 (347)
T 2ifg_A 8 HGSSGLRCTRD---------GALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAF 76 (347)
T ss_dssp SSSSCEECCSS---------CCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGG
T ss_pred ccCCEEEcCCC---------CCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHh
Confidence 67766666431 0233 2444 55555555555553 55544444444455555555555555444444444
Q ss_pred cccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCC
Q 047790 133 GLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLN 173 (885)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 173 (885)
+.|++|++|+|++|+|++..+..|..++ |+.|+|++|.+.
T Consensus 77 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 77 HFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp GSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred cCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 4444444444444444433333333332 444444444443
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=99.31 E-value=2e-10 Score=127.51 Aligned_cols=87 Identities=11% Similarity=0.204 Sum_probs=41.1
Q ss_pred ccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCC
Q 047790 348 VIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGD 427 (885)
Q Consensus 348 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 427 (885)
....+|.++.+|+.+.+..+.. .+...+|.++..|+.+.+. +.++.+...+|.++.+|+.+++..+ ++.+-..+|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 3344455555555555543322 2333445555555555553 3333344445555555555555433 33334445555
Q ss_pred CCcccEEEcC
Q 047790 428 CISLNTLDLG 437 (885)
Q Consensus 428 l~~L~~L~Ls 437 (885)
+.+|+.+.+.
T Consensus 333 C~~L~~i~ip 342 (394)
T 4gt6_A 333 CEQLERIAIP 342 (394)
T ss_dssp CTTCCEEEEC
T ss_pred CCCCCEEEEC
Confidence 5555555553
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=99.29 E-value=9.9e-11 Score=129.95 Aligned_cols=111 Identities=13% Similarity=0.232 Sum_probs=65.4
Q ss_pred cCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCC
Q 047790 349 IPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDC 428 (885)
Q Consensus 349 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 428 (885)
....|.++.+|+.+.+. +.+..+...+|.++.+|+.++|..+ ++.+...+|.++++|+.+.+..+ ++.+-..+|.++
T Consensus 280 ~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C 356 (394)
T 4gt6_A 280 GTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNC 356 (394)
T ss_dssp CTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTC
T ss_pred cCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCC
Confidence 34455566666666664 3444455566777777777777654 55566677788888888887644 665556778888
Q ss_pred CcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccc
Q 047790 429 ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLL 481 (885)
Q Consensus 429 ~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 481 (885)
.+|+.+++.+|... -..+....+|+.+.+..|.+
T Consensus 357 ~~L~~i~~~~~~~~-------------------~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 357 TALNNIEYSGSRSQ-------------------WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTCCEEEESSCHHH-------------------HHTCBCCCCC----------
T ss_pred CCCCEEEECCceee-------------------hhhhhccCCCCEEEeCCCCE
Confidence 88888877766532 13445556677666665544
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.28 E-value=5e-12 Score=137.99 Aligned_cols=105 Identities=23% Similarity=0.208 Sum_probs=94.7
Q ss_pred EEecCCC-cccCcCCcCccCcCCCCEEeccC-CcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccC
Q 047790 92 ILDLSKN-LLFGQLSPQVSNLKRLKMLSVGE-NQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSG 169 (885)
Q Consensus 92 ~L~Ls~n-~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 169 (885)
.++++++ .+++ +|. +..+++|++|+|++ |+|++..|..|+.|++|++|+|++|+|++..|..|+++++|++|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4688888 8874 777 99999999999996 999988888999999999999999999999999999999999999999
Q ss_pred CcCCccCCcccCCCCCCccccccccccCCC
Q 047790 170 NGLNGTIPSRLGDLTQLQDLDLSDNLLSGS 199 (885)
Q Consensus 170 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 199 (885)
|+|++..+..|..++ |+.|+|++|.+...
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 999976666677666 99999999999843
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.25 E-value=7.1e-14 Score=153.17 Aligned_cols=40 Identities=23% Similarity=0.143 Sum_probs=17.2
Q ss_pred CCCCcEEEecCCcccccc----cccccCCCCCcEEEccCCCCcC
Q 047790 261 CSMLKYISLSNNKLSGPI----PRELCNSGSLVEINLDGNMLSG 300 (885)
Q Consensus 261 l~~L~~L~Ls~N~l~~~~----p~~l~~l~~L~~L~L~~N~l~~ 300 (885)
+++|++|+|++|.|++.. +..+...++|++|+|++|.|+.
T Consensus 210 ~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 210 NRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 344555555555554321 1222233444444444444443
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=8.2e-14 Score=152.71 Aligned_cols=165 Identities=19% Similarity=0.164 Sum_probs=90.8
Q ss_pred cccccEeeeeccCCCCCCCccccC-----CccCceEEccCCcCCccCCccc-CCCCCCccccccccccCCCCCcccc---
Q 047790 135 LTRLETISLRSNSFTGEMPSELGD-----IKQLKSLDFSGNGLNGTIPSRL-GDLTQLQDLDLSDNLLSGSLPVSLL--- 205 (885)
Q Consensus 135 l~~L~~L~Ls~N~l~~~~p~~l~~-----l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~--- 205 (885)
+++|++|+|++|.++......+.. .++|++|+|++|.++......+ ..+++|++|+|++|.++ ......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~-~~~~~~L~~~ 149 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG-PEACKDLRDL 149 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC-HHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC-HHHHHHHHHH
Confidence 355667777777666433333322 2466666666666653322222 23445666666666664 2221112
Q ss_pred --cccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccc----c
Q 047790 206 --KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPI----P 279 (885)
Q Consensus 206 --~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~----p 279 (885)
...++|++|+|++|.++... ...++..+..+++|++|+|++|.|++.. +
T Consensus 150 L~~~~~~L~~L~Ls~n~l~~~~-------------------------~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~ 204 (372)
T 3un9_A 150 LLHDQCQITTLRLSNNPLTAAG-------------------------VAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLA 204 (372)
T ss_dssp HHSTTCCCCEEECCSSCCHHHH-------------------------HHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHH
T ss_pred HHhcCCccceeeCCCCCCChHH-------------------------HHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHH
Confidence 12345666666666554210 1123334456677778888888776532 4
Q ss_pred ccccCCCCCcEEEccCCCCcCcc----cccccccCCcceeeccccccCCC
Q 047790 280 RELCNSGSLVEINLDGNMLSGTI----EDVFDRCTNLSELVLVNNRISGS 325 (885)
Q Consensus 280 ~~l~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~ 325 (885)
..+...++|++|+|++|.|+... +..+...++|++|+|++|.|++.
T Consensus 205 ~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 205 AQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 45566677777777777776533 23344557777777777777643
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=6.5e-11 Score=123.57 Aligned_cols=142 Identities=13% Similarity=0.004 Sum_probs=111.8
Q ss_pred EEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEEeccc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.|++....+.|+.+.||++... ++.+++|...........++.+|+++++.+. +..+.++++++...+..|+||||++
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~ 93 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred cceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence 4778888888999999999864 6789999987543233456889999999885 6778899999988889999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC------------------------------------------
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF------------------------------------------ 778 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~------------------------------------------ 778 (885)
|.++.+.... ......++.+++++++.||...
T Consensus 94 G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 94 GVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp SEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred CeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 9999876321 1123467889999999999510
Q ss_pred --------------CCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 779 --------------KPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 779 --------------~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
...++|||++|.||+++++..+.++||+.+..
T Consensus 168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 14589999999999998765667999997754
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=99.05 E-value=9.7e-09 Score=113.25 Aligned_cols=314 Identities=10% Similarity=0.066 Sum_probs=159.8
Q ss_pred ccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCc
Q 047790 84 LFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLK 163 (885)
Q Consensus 84 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 163 (885)
...-++|+.+.+.. .++.....+|.++++|+.++|..+ ++..-..+|.+. +|+.+.+..+ ++.....+|.. .+|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcc
Confidence 34445566666653 355455566777777777777643 553444556655 5666666543 44233344444 3677
Q ss_pred eEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccc
Q 047790 164 SLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIG 243 (885)
Q Consensus 164 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 243 (885)
.+.+..+- ......+|.+. +|+.+.+..+ ++ .+....|....+++...+..+.........+ ....
T Consensus 117 ~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~~-v~-~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-~~~~--------- 182 (379)
T 4h09_A 117 DFEFPGAT-TEIGNYIFYNS-SVKRIVIPKS-VT-TIKDGIGYKAENLEKIEVSSNNKNYVAENYV-LYNK--------- 182 (379)
T ss_dssp EEECCTTC-CEECTTTTTTC-CCCEEEECTT-CC-EECSCTTTTCTTCCEEEECTTCSSEEEETTE-EEET---------
T ss_pred cccCCCcc-ccccccccccc-eeeeeeccce-ee-ccccchhcccccccccccccccceeecccce-eccc---------
Confidence 77776543 22334445443 4555544433 33 4445556666666666665544321100000 0000
Q ss_pred cccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccC
Q 047790 244 PYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323 (885)
Q Consensus 244 ~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 323 (885)
.......+.....+..+.+....-. .....+....+|+.+.+..+ ++.+...+|..+..|+.+.+..+ ++
T Consensus 183 -------~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~ 252 (379)
T 4h09_A 183 -------NKTILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT 252 (379)
T ss_dssp -------TSSEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC
T ss_pred -------ccceeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc
Confidence 0011112233344444444333222 33445555566666666543 44455556666666666666554 33
Q ss_pred CCCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCccccc
Q 047790 324 GSIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIG 402 (885)
Q Consensus 324 ~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 402 (885)
.+....+... .++.+.+.. .++......|.++.+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+-..+|.
T Consensus 253 ~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~ 330 (379)
T 4h09_A 253 SIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFK 330 (379)
T ss_dssp EECTTTTTTCTTCCEEEECC-CCSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred EeCccccceeehhccccccc-cceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhh
Confidence 3333344433 455555533 244444455666666666666666565555566666666666666543 4445555666
Q ss_pred ccccccceecccccccCcCCCccCCCC
Q 047790 403 NLTNIQILKLNSNFFDGIIPMEFGDCI 429 (885)
Q Consensus 403 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 429 (885)
++++|+.+.+..+ ++.+-..+|.++.
T Consensus 331 ~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 331 NCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred CCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 6666666666543 4444445555543
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.00 E-value=9.1e-10 Score=114.64 Aligned_cols=135 Identities=15% Similarity=0.069 Sum_probs=99.1
Q ss_pred eecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCC--ccceeeeeEeCCeeEEEEecccC
Q 047790 664 VFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQN--LVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 664 ~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~--i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
.+....+.|..+.||++...+|+.+++|..... ....+..|+++++.+.+.. +.+++++...++..++||||++|
T Consensus 23 ~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G 99 (264)
T 1nd4_A 23 DWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG 99 (264)
T ss_dssp EEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred ceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCC
Confidence 333333456679999998877888999997543 2345778999998886543 56688888877788999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC-------------------------------------------
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF------------------------------------------- 778 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~------------------------------------------- 778 (885)
.++. ... .+ ...++.++++.++.+|...
T Consensus 100 ~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 100 QDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp EETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred cccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 8873 211 12 2356777888888888421
Q ss_pred ------------CCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 779 ------------KPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 779 ------------~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..+++|||++|.||++++++.+.++||+.+..
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998776677999998754
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.5e-08 Score=109.93 Aligned_cols=84 Identities=8% Similarity=0.122 Sum_probs=57.6
Q ss_pred ccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccc
Q 047790 130 SQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQ 209 (885)
Q Consensus 130 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~ 209 (885)
+++....+|+.+.+.. .++.+...+|.++.+|+.++|..+ ++.+...+|.+. +|+.+.+..+ ++ .++..+|...
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~~~- 113 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQGT- 113 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC-EECTTTTTTC-
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee-EeccceeccC-
Confidence 4566677888888864 366555667888888888888654 665666677776 6777766544 44 6666667654
Q ss_pred cccEEEeecc
Q 047790 210 SLSYLDVSNN 219 (885)
Q Consensus 210 ~L~~L~Ls~N 219 (885)
+|+.+.+.++
T Consensus 114 ~L~~i~lp~~ 123 (379)
T 4h09_A 114 DLDDFEFPGA 123 (379)
T ss_dssp CCSEEECCTT
T ss_pred CcccccCCCc
Confidence 6888877654
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.94 E-value=6.2e-12 Score=129.18 Aligned_cols=173 Identities=18% Similarity=0.190 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHHHhCCC-CCCCCCCC--C------------CCCCcccCCccccCC--cEEEEEEec---ccccccccc
Q 047790 23 EPKQERRSLVHFKNSLQN-PQVLSGWN--K------------TTRHCHWFGVKCRHS--RVVSLVIQT---QSLKGPVSP 82 (885)
Q Consensus 23 ~~~~~~~aLl~~k~~~~~-~~~~~~w~--~------------~~~~c~w~gv~c~~~--~v~~l~l~~---~~l~g~~~~ 82 (885)
+..-|++.|+.+-+.... +=....|. . ....|.|.|+.|+.. +|+.+...+ ..+.|.+.+
T Consensus 32 g~ky~k~~ll~~i~~~~~~~f~p~~~~~~~~~~~ffV~~~~~A~~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~ 111 (267)
T 3rw6_A 32 GRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKP 111 (267)
T ss_dssp GGGSCHHHHHHHHHHTCSSCCCCEEEEEETTEEEEEESCHHHHHHHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCH
T ss_pred ccccCHHHHHHHHHHhCCCCcEeEEEEEeCCEEEEEeCChHHHHHHHhcCcEEECCCCCEEEEEEecCCCcccccccCCH
Confidence 455577888888776542 11122231 0 112488999999865 776665554 344555543
Q ss_pred -cccCCCCCCEEecCCCcccCcCCc-CccCcCCCCE--EeccCCcCCCCCCcc----ccccccccEeeeeccCCCC--CC
Q 047790 83 -FLFNLSSLRILDLSKNLLFGQLSP-QVSNLKRLKM--LSVGENQLSGSIPSQ----LGLLTRLETISLRSNSFTG--EM 152 (885)
Q Consensus 83 -~l~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~--L~L~~n~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~--~~ 152 (885)
.+..++. .|...+|.-++.++- .+...+.|+. ++++.|+.. .++.. ..++++|++|+|++|+|++ .+
T Consensus 112 ~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l 188 (267)
T 3rw6_A 112 EQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDM 188 (267)
T ss_dssp HHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGG
T ss_pred HHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccc
Confidence 1222221 122222222221111 1333333333 444444322 11211 1234555555555555554 23
Q ss_pred CccccCCccCceEEccCCcCCccCCcccCCCC--CCccccccccccCCCC
Q 047790 153 PSELGDIKQLKSLDFSGNGLNGTIPSRLGDLT--QLQDLDLSDNLLSGSL 200 (885)
Q Consensus 153 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~ 200 (885)
|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+
T Consensus 189 ~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 189 SSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTF 236 (267)
T ss_dssp TTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGC
T ss_pred hhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcccc
Confidence 34444555555555555555533 1122222 4555555555554333
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.83 E-value=8.2e-10 Score=119.76 Aligned_cols=205 Identities=14% Similarity=0.168 Sum_probs=116.6
Q ss_pred CCCCEEeccCCcCCC-CC-------CccccccccccEeeeeccCCC---------CCCCccccCCccCceEEccCCcCCc
Q 047790 112 KRLKMLSVGENQLSG-SI-------PSQLGLLTRLETISLRSNSFT---------GEMPSELGDIKQLKSLDFSGNGLNG 174 (885)
Q Consensus 112 ~~L~~L~L~~n~l~~-~~-------p~~~~~l~~L~~L~Ls~N~l~---------~~~p~~l~~l~~L~~L~Ls~N~l~~ 174 (885)
++++.|.+......+ .. ..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 457788888666552 21 334556789999988765432 123344556778888888776311
Q ss_pred cCCcccCCCCCCccccccccccCCCCCccccc--ccccccEEEeecc--cCcccCCccccCCCcccceeccccccccccc
Q 047790 175 TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLK--NLQSLSYLDVSNN--LLSGNIPPEIGNLKKLSDLYLGIGPYQLSLF 250 (885)
Q Consensus 175 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~l~~L~~L~Ls~N--~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 250 (885)
.++. +. +++|++|+|..|.+..... ..+. .+++|++|+|+.+ ...+.. .+.
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l-~~l~~~~lp~L~~L~L~~~~~~~~~~~--~~~-------------------- 240 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVV-EDILGSDLPNLEKLVLYVGVEDYGFDG--DMN-------------------- 240 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHH-HHHHHSBCTTCCEEEEECBCGGGTCCS--CGG--------------------
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHH-HHHHHccCCCCcEEEEeccccccccch--hHH--------------------
Confidence 2232 33 6777777777776642111 1122 5677777776531 111100 000
Q ss_pred ccccCccc--cCCCCCcEEEecCCccccccccccc---CCCCCcEEEccCCCCcCcc----cccccccCCcceeeccccc
Q 047790 251 VGRITPEI--GNCSMLKYISLSNNKLSGPIPRELC---NSGSLVEINLDGNMLSGTI----EDVFDRCTNLSELVLVNNR 321 (885)
Q Consensus 251 ~~~~~~~l--~~l~~L~~L~Ls~N~l~~~~p~~l~---~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~ 321 (885)
.+.+.+ ..+++|++|+|++|.+.+..+..+. .+++|++|+|+.|.+++.. +..+..+++|+.|+|++|.
T Consensus 241 --~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 241 --VFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp --GTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBB
T ss_pred --HHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCc
Confidence 011111 2467899999999888765444333 4678888888888887642 3333567888888888887
Q ss_pred cCCCCCcccCCCCceeEEeecCc
Q 047790 322 ISGSIPEYISELPLKVFDLQYNN 344 (885)
Q Consensus 322 l~~~~p~~~~~~~L~~L~Ls~N~ 344 (885)
|+...-..+...-...++++.++
T Consensus 319 i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 319 LSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp CCHHHHHHHHHHCCSEEECCSBC
T ss_pred CCHHHHHHHHHHcCCEEEecCCc
Confidence 76432222222112345666555
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.80 E-value=1e-09 Score=119.00 Aligned_cols=60 Identities=15% Similarity=0.153 Sum_probs=39.5
Q ss_pred CCCCcEEEecCCcccccc----cccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccc
Q 047790 261 CSMLKYISLSNNKLSGPI----PRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNR 321 (885)
Q Consensus 261 l~~L~~L~Ls~N~l~~~~----p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 321 (885)
+++|++|+|+.|.+++.. +..+..+++|+.|+|++|.|+......+...- ...+++++++
T Consensus 278 ~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 278 LPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp GGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC-CSEEECCSBC
T ss_pred CCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc-CCEEEecCCc
Confidence 567888888888877643 33334567888888888887765544444311 3567887776
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.79 E-value=1e-08 Score=112.10 Aligned_cols=141 Identities=18% Similarity=0.235 Sum_probs=104.3
Q ss_pred cceecccCCceEEEEEeCCCCeEEEEEec--ccc-cccHHHHHHHHHHhcccCC--CCccceeeeeEeC---CeeEEEEe
Q 047790 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLS--QAT-GQCDREFAAEMETLDMVKH--QNLVQLLGYCSVG---EEKLLVYE 737 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~~~~valK~~~--~~~-~~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~---~~~~lv~e 737 (885)
.+.++.|.++.||++...+ +.+++|+.. ... ......+.+|.++++.+.. ..+++++.++.+. +..|+|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4567889999999998754 678888875 322 1234578889999999874 5578888887765 45799999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC---------------------------------------
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF--------------------------------------- 778 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~--------------------------------------- 778 (885)
|++|..+.+. ....++......++.+++.+++.+|...
T Consensus 122 ~v~G~~l~~~---~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (359)
T 3dxp_A 122 FVSGRVLWDQ---SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD 198 (359)
T ss_dssp CCCCBCCCCT---TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred ecCCeecCCC---ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence 9998776431 1123677888899999999999999521
Q ss_pred ----------------CCCceecCCCCCcEEEcCCCc--EEEeeccCccc
Q 047790 779 ----------------KPYIIHMDIKTSNILLNDYFE--AKVSDFGLARL 810 (885)
Q Consensus 779 ----------------~~~i~H~dlkp~Nil~~~~~~--vkl~Dfg~a~~ 810 (885)
...++|||+++.||+++.++. +.++||+.+..
T Consensus 199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999987653 68999998864
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.5e-08 Score=107.91 Aligned_cols=185 Identities=18% Similarity=0.153 Sum_probs=119.3
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccC-CCC--ccceeeeeEeCC---eeEEEEeccc
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQN--LVQLLGYCSVGE---EKLLVYEYMV 740 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~--i~~~~~~~~~~~---~~~lv~e~~~ 740 (885)
+.++.|....||++. +.+++|+.... .....+.+|.++++.+. +.. +.+++....... ..|+||++++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 458889999999864 56888886433 23467889999998874 322 444544443332 3478999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC------------------------------------------
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF------------------------------------------ 778 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~------------------------------------------ 778 (885)
|.++.+... ..++..+...++.+++..++.+|...
T Consensus 100 G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 176 (304)
T 3sg8_A 100 GVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDF 176 (304)
T ss_dssp CEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred CeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHH
Confidence 988765332 12667777888888888888888411
Q ss_pred -------------CCCceecCCCCCcEEEcC--CCcEEEeeccCcccccCCCCCcccCCCCCCccCCccccc----CC-C
Q 047790 779 -------------KPYIIHMDIKTSNILLND--YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQ----AG-R 838 (885)
Q Consensus 779 -------------~~~i~H~dlkp~Nil~~~--~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~-~ 838 (885)
...++|+|++|.||++++ ...+.++||+.+..-.+......... .... ..|+... .. .
T Consensus 177 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~-~~~~-~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 177 YRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLME-DDEE-YGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCC-TTTS-CCHHHHHHHHHHHTC
T ss_pred HHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHh-hccc-cCHHHHHHHHHHcCC
Confidence 135799999999999997 55678999998865322100000000 0000 1222111 00 0
Q ss_pred C---------CCcchhHHHHHHHHHHHhCCCCC
Q 047790 839 A---------NERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 839 ~---------~~~~DvwslGvvl~elltg~~P~ 862 (885)
. ....+.|++++++|.+.+|..+|
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0 11258999999999999999875
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.44 E-value=6e-09 Score=101.91 Aligned_cols=94 Identities=15% Similarity=0.166 Sum_probs=47.9
Q ss_pred ccccccCCCCCCEEecCCC-cccCc----CCcCccCcCCCCEEeccCCcCCCC----CCccccccccccEeeeeccCCCC
Q 047790 80 VSPFLFNLSSLRILDLSKN-LLFGQ----LSPQVSNLKRLKMLSVGENQLSGS----IPSQLGLLTRLETISLRSNSFTG 150 (885)
Q Consensus 80 ~~~~l~~l~~L~~L~Ls~n-~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 150 (885)
+...+...+.|++|+|++| .+... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445666777777777777 66432 233344456666666666666532 12223333455555555555542
Q ss_pred C----CCccccCCccCceEEc--cCCcCC
Q 047790 151 E----MPSELGDIKQLKSLDF--SGNGLN 173 (885)
Q Consensus 151 ~----~p~~l~~l~~L~~L~L--s~N~l~ 173 (885)
. +...+...+.|++|+| ++|.|.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2 2233334444555555 444444
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.37 E-value=2.3e-08 Score=102.67 Aligned_cols=105 Identities=27% Similarity=0.303 Sum_probs=75.2
Q ss_pred ccCCCCCCE--EecCCCcc---cCcCCcCccCcCCCCEEeccCCcCCC--CCCccccccccccEeeeeccCCCCCCCccc
Q 047790 84 LFNLSSLRI--LDLSKNLL---FGQLSPQVSNLKRLKMLSVGENQLSG--SIPSQLGLLTRLETISLRSNSFTGEMPSEL 156 (885)
Q Consensus 84 l~~l~~L~~--L~Ls~n~l---~~~~~~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 156 (885)
+...+.|+. ++++.|.. .+.++....++++|+.|+|++|+|++ .+|..+..+++|++|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 334444555 67777743 22222223568899999999999997 4567788999999999999999965 345
Q ss_pred cCCc--cCceEEccCCcCCccCCc-------ccCCCCCCcccc
Q 047790 157 GDIK--QLKSLDFSGNGLNGTIPS-------RLGDLTQLQDLD 190 (885)
Q Consensus 157 ~~l~--~L~~L~Ls~N~l~~~~p~-------~~~~l~~L~~L~ 190 (885)
..++ +|++|+|++|.+.+.+|. .+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 5555 999999999999876663 245666666665
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=7.9e-06 Score=85.08 Aligned_cols=134 Identities=13% Similarity=0.076 Sum_probs=97.1
Q ss_pred ecccCCc-eEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEEecccCCCHH
Q 047790 669 IGGGGFR-TAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVYEYMVNGSLD 745 (885)
Q Consensus 669 lG~G~~g-~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~ 745 (885)
+..|..+ .||+.... ++..+++|+-... ....+.+|.+.++.+. +-.|.+++.++.+.+..++|||+++|.++.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 3445554 68988765 4667888886433 3567888999998876 334778889988889999999999998887
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC-----------------------------------------------
Q 047790 746 DWLRNRAASLDWGKRCKIAYGAARGISFLHHGF----------------------------------------------- 778 (885)
Q Consensus 746 ~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~----------------------------------------------- 778 (885)
+..... ......++.++...++.||...
T Consensus 109 ~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 183 (272)
T 4gkh_A 109 QVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEM 183 (272)
T ss_dssp HHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHH
T ss_pred ccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHH
Confidence 765431 1223456667777777777311
Q ss_pred --------CCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 779 --------KPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 779 --------~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
...++|+|+.+.||++++.+.+-|+||+.+..
T Consensus 184 ~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 184 HKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11268999999999999887778999998764
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=8.4e-06 Score=86.51 Aligned_cols=135 Identities=19% Similarity=0.149 Sum_probs=91.8
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCC---CccceeeeeE-eCCeeEEEEecccCC
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQ---NLVQLLGYCS-VGEEKLLVYEYMVNG 742 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~---~i~~~~~~~~-~~~~~~lv~e~~~~~ 742 (885)
+.++.|....||+. ++.+++|+-.. ......+.+|.++++.+.+. .|.+++.+.. ..+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 34677888889987 56788888432 22346788999999998753 3566666664 345678999999998
Q ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcc---------------------------------------------
Q 047790 743 SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG--------------------------------------------- 777 (885)
Q Consensus 743 sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~--------------------------------------------- 777 (885)
.+.+..- ..++......++.++...++.||..
T Consensus 99 ~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 175 (306)
T 3tdw_A 99 ILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR 175 (306)
T ss_dssp ECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred ECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 8766321 1134444445555555555555522
Q ss_pred ------------CCCCceecCCCCCcEEEcC---CCc-EEEeeccCccc
Q 047790 778 ------------FKPYIIHMDIKTSNILLND---YFE-AKVSDFGLARL 810 (885)
Q Consensus 778 ------------~~~~i~H~dlkp~Nil~~~---~~~-vkl~Dfg~a~~ 810 (885)
....++|+|++|.||+++. ++. +.++||+.+..
T Consensus 176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1345799999999999987 355 48999998765
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.16 E-value=2.9e-07 Score=89.81 Aligned_cols=119 Identities=13% Similarity=0.207 Sum_probs=59.9
Q ss_pred cccCCCCCCcccccccc-ccCCC----CCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccccccc
Q 047790 178 SRLGDLTQLQDLDLSDN-LLSGS----LPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVG 252 (885)
Q Consensus 178 ~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~ 252 (885)
..+...++|++|+|++| .+... +. ..+...++|++|+|++|++......
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~-~~L~~~~~L~~L~Ls~n~i~~~g~~------------------------- 83 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACA-EALKTNTYVKKFSIVGTRSNDPVAF------------------------- 83 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHH-HHHTTCCSCCEEECTTSCCCHHHHH-------------------------
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHH-HHHHhCCCcCEEECcCCCCChHHHH-------------------------
Confidence 34555666777777776 65411 11 1234445666666666666421110
Q ss_pred ccCccccCCCCCcEEEecCCccccc----ccccccCCCCCcEEEc--cCCCCcCcc----cccccccCCcceeecccccc
Q 047790 253 RITPEIGNCSMLKYISLSNNKLSGP----IPRELCNSGSLVEINL--DGNMLSGTI----EDVFDRCTNLSELVLVNNRI 322 (885)
Q Consensus 253 ~~~~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l 322 (885)
.+...+...++|++|+|++|.|++. +...+...++|++|+| ++|.|+... .+.+...++|++|+|++|.+
T Consensus 84 ~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 84 ALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 1222233445566666666666643 2344445556666666 556665432 22333345555555555544
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=4.7e-06 Score=90.70 Aligned_cols=79 Identities=11% Similarity=0.074 Sum_probs=54.7
Q ss_pred ccee-cccCCceEEEEEeC-------CCCeEEEEEecccc---cccHHHHHHHHHHhcccCC---CCccceeeeeEeC--
Q 047790 666 ENVI-GGGGFRTAFKGTMP-------DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKH---QNLVQLLGYCSVG-- 729 (885)
Q Consensus 666 ~~~l-G~G~~g~vy~a~~~-------~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~---~~i~~~~~~~~~~-- 729 (885)
.+.| +.|....+|+.... +++.+++|...... ......+.+|+++++.+.. -.+.+++.+..+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 78888999998754 26678888765432 1112467788888888753 3577788776554
Q ss_pred -CeeEEEEecccCCCH
Q 047790 730 -EEKLLVYEYMVNGSL 744 (885)
Q Consensus 730 -~~~~lv~e~~~~~sL 744 (885)
+..++||||++|..+
T Consensus 105 ~g~~~~v~e~l~G~~l 120 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVP 120 (357)
T ss_dssp TSSCEEEEECCCCBCC
T ss_pred cCCceEEEEecCCCCh
Confidence 356899999988654
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.79 E-value=4.2e-06 Score=79.41 Aligned_cols=34 Identities=6% Similarity=0.167 Sum_probs=17.5
Q ss_pred CCCEEecCCCcccCcCCcCccCcCCCCEEeccCC
Q 047790 89 SLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGEN 122 (885)
Q Consensus 89 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 122 (885)
.|++|||+++.++..--..+..+++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3555555555554444444445555555555554
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00014 Score=78.43 Aligned_cols=138 Identities=18% Similarity=0.240 Sum_probs=79.4
Q ss_pred eecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCC--CCccceee------eeEeCCeeEEEEecc
Q 047790 668 VIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH--QNLVQLLG------YCSVGEEKLLVYEYM 739 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~--~~i~~~~~------~~~~~~~~~lv~e~~ 739 (885)
.++.|..+.||++...++ .+++|+.... ..++..|.++++.+.. -.|.+++. +....+..+++|+|+
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 456667889999987554 5889988652 2444556666665541 12344443 223467789999999
Q ss_pred cCCCHH-----------H---HHhh--cCC--C---------CCHHH-------------------------------HH
Q 047790 740 VNGSLD-----------D---WLRN--RAA--S---------LDWGK-------------------------------RC 761 (885)
Q Consensus 740 ~~~sL~-----------~---~l~~--~~~--~---------~~~~~-------------------------------~~ 761 (885)
+|..+. . .++. ... . ..+.. ..
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 886431 1 1111 100 0 11111 01
Q ss_pred HHHHHHHHHHHHHhc----------cCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 762 KIAYGAARGISFLHH----------GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 762 ~i~~~l~~~l~~LH~----------~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.+..++..++++++. ....+++|||+++.||+++.++.+.++||+.+..
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 111223344555542 1257899999999999998778899999998754
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.77 E-value=3.6e-06 Score=79.88 Aligned_cols=83 Identities=16% Similarity=0.157 Sum_probs=45.2
Q ss_pred CCCCEEeccCCcCCCCCCccccccccccEeeeeccC-CCCCCCccccCC----ccCceEEccCCc-CCccCCcccCCCCC
Q 047790 112 KRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNS-FTGEMPSELGDI----KQLKSLDFSGNG-LNGTIPSRLGDLTQ 185 (885)
Q Consensus 112 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 185 (885)
-+|++|||+++.|+..--..+..+++|++|+|++|. ++..--..++.+ ++|++|+|++|. |++..-..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356777777776665444455666666666666663 543333334443 246666666653 55332233444555
Q ss_pred Ccccccccc
Q 047790 186 LQDLDLSDN 194 (885)
Q Consensus 186 L~~L~Ls~N 194 (885)
|++|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555554
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=9.4e-05 Score=81.64 Aligned_cols=75 Identities=13% Similarity=0.032 Sum_probs=49.6
Q ss_pred cceecccCCceEEEEEeC-CCCeEEEEEeccccc-------ccHHHHHHHHHHhcccCC--C-CccceeeeeEeCCeeEE
Q 047790 666 ENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-------QCDREFAAEMETLDMVKH--Q-NLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-------~~~~~~~~E~~~l~~l~~--~-~i~~~~~~~~~~~~~~l 734 (885)
.+.+|.|..+.||++... +++.+++|....... ....++..|.++++.+.. | .+.+++.+ +....++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357899999999999754 467899997643211 123466789999887753 3 34455544 3455689
Q ss_pred EEecccCC
Q 047790 735 VYEYMVNG 742 (885)
Q Consensus 735 v~e~~~~~ 742 (885)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00033 Score=73.87 Aligned_cols=75 Identities=17% Similarity=0.194 Sum_probs=59.5
Q ss_pred cceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccC---CCCccceeeeeEeCCeeEEEEecccCC
Q 047790 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK---HQNLVQLLGYCSVGEEKLLVYEYMVNG 742 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~e~~~~~ 742 (885)
.+.++.|....+|+... +++.+++|+.... ....+..|.+.++.+. ...|++++.+....+..++||||++|.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 35688899999999986 5678888886543 2567889999998885 356888888887778899999999987
Q ss_pred CH
Q 047790 743 SL 744 (885)
Q Consensus 743 sL 744 (885)
.+
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 53
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00064 Score=71.15 Aligned_cols=75 Identities=20% Similarity=0.255 Sum_probs=56.2
Q ss_pred ecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCC---CccceeeeeEeCCeeEEEEecccC
Q 047790 665 FENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQ---NLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 665 ~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~---~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
-.+.+|.|..+.||+.+..||+.|++|+...........+..|.+.|+.+... .+++++.+ +..++||||+++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecc
Confidence 35778999999999999999999999987655444456788999999988532 34455543 234789999976
Q ss_pred CC
Q 047790 742 GS 743 (885)
Q Consensus 742 ~s 743 (885)
+.
T Consensus 95 ~~ 96 (288)
T 3f7w_A 95 RP 96 (288)
T ss_dssp CC
T ss_pred cC
Confidence 53
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0007 Score=75.16 Aligned_cols=80 Identities=10% Similarity=-0.016 Sum_probs=45.8
Q ss_pred CCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCC---CCCcchhHHHHHHHHHH
Q 047790 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGR---ANERGDIYSFGVILLEL 855 (885)
Q Consensus 779 ~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGvvl~el 855 (885)
...++|||++|.||++++++ ++++||+.+..-.+.-.-......-...|++|+...... .....++.+....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 67899999999999998776 999999988653211000000000012345555433111 11234455667777776
Q ss_pred HhCC
Q 047790 856 VTGK 859 (885)
Q Consensus 856 ltg~ 859 (885)
+++.
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00016 Score=65.49 Aligned_cols=64 Identities=22% Similarity=0.277 Sum_probs=35.7
Q ss_pred ccccccccCC-CCCCccccCccccceeecccCcCCCCCCCC-ccccccccccccCCccccccccCCcccccccc
Q 047790 574 YLDFSMNMLD-GHIPEKLCSLPYLLYLNLADNRLEGEVPRS-GICQNLSIISLTGNKDLCEKIMGSDCQILTFG 645 (885)
Q Consensus 574 ~L~Ls~N~l~-~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~c~~~~~~~c~~~~~~ 645 (885)
.++.+++.|+ ..+|..+. ++|++|+|++|+|+..++.. ..+.+++.+++.+|||.| ||.+.|+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C------dC~l~~l~ 77 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC------DCRLVPLR 77 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC------SGGGHHHH
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec------cCccHHHH
Confidence 4445555553 23443321 23555555555555433322 233455667888899999 89987764
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0015 Score=68.75 Aligned_cols=71 Identities=13% Similarity=0.095 Sum_probs=44.1
Q ss_pred cceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCc-cceeeeeEeCCeeEEEEecc-cCCC
Q 047790 666 ENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNL-VQLLGYCSVGEEKLLVYEYM-VNGS 743 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~-~~~s 743 (885)
.+.++.|....+|++ +.+++|+....... ..+..+|.++++.+....+ .+++.+ +.+..++++||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 466778888999998 56888887643211 1223568888877753333 455544 334457899999 6644
Q ss_pred H
Q 047790 744 L 744 (885)
Q Consensus 744 L 744 (885)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0017 Score=69.44 Aligned_cols=139 Identities=14% Similarity=0.090 Sum_probs=73.1
Q ss_pred eecccCCce-EEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCC--CCccceeeeeEeCCeeEEEEecccCCCH
Q 047790 668 VIGGGGFRT-AFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH--QNLVQLLGYCSVGEEKLLVYEYMVNGSL 744 (885)
Q Consensus 668 ~lG~G~~g~-vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~e~~~~~sL 744 (885)
.++.|+... +|+....+++.+++|...... ...+..|+++++.+.. -.+.+++.+... ..+++||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~--~g~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHA--RGLLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETT--TTEEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCC--CCEEEEeeCCCcch
Confidence 344454443 667765446778887654322 1234556777776642 235566665332 23789999977666
Q ss_pred HHHHhhc-------------------C------CCCCHHHHHH--------------------HHHHHHHHHHHHh---c
Q 047790 745 DDWLRNR-------------------A------ASLDWGKRCK--------------------IAYGAARGISFLH---H 776 (885)
Q Consensus 745 ~~~l~~~-------------------~------~~~~~~~~~~--------------------i~~~l~~~l~~LH---~ 776 (885)
.+++... . ..++...... ....+...++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 5443210 0 0112111100 0011111222221 1
Q ss_pred cCCCCceecCCCCCcEEEcCC----CcEEEeeccCcccc
Q 047790 777 GFKPYIIHMDIKTSNILLNDY----FEAKVSDFGLARLI 811 (885)
Q Consensus 777 ~~~~~i~H~dlkp~Nil~~~~----~~vkl~Dfg~a~~~ 811 (885)
.....++|||+.+.||+++.+ +.+.++||+.+..-
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 125679999999999999874 67999999987653
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0081 Score=63.92 Aligned_cols=139 Identities=12% Similarity=0.106 Sum_probs=81.5
Q ss_pred eecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCC--Cccceeee-----eEeCCeeEEEEeccc
Q 047790 668 VIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQ--NLVQLLGY-----CSVGEEKLLVYEYMV 740 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~--~i~~~~~~-----~~~~~~~~lv~e~~~ 740 (885)
.++ |....||++...+|+.+++|...... .....+..|.++++.+... .+++++.. ...++..+++|+|++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 77789999887778789999986332 2346677788888777522 24444432 233556789999998
Q ss_pred CCCHH-----H------H---Hhh--cC------CCCCHHHH----------------------HHHHHHHHHHHHHHhc
Q 047790 741 NGSLD-----D------W---LRN--RA------ASLDWGKR----------------------CKIAYGAARGISFLHH 776 (885)
Q Consensus 741 ~~sL~-----~------~---l~~--~~------~~~~~~~~----------------------~~i~~~l~~~l~~LH~ 776 (885)
|..+. . . ++. .. ...+.... ...+.+++..++....
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 74321 1 1 110 00 01121111 1111122222222210
Q ss_pred -cCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 777 -GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 777 -~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
.....++|||+++.||+++ + .+.++||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1256789999999999999 4 899999988754
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00016 Score=69.84 Aligned_cols=93 Identities=12% Similarity=0.157 Sum_probs=47.9
Q ss_pred ccccccccEEEccCCcccccCcccc----cccccccceecccccccCc----CCCccCCCCcccEEEcCCcc---cCcce
Q 047790 377 ISNAVALEKLDLSSNMLTRQIPKKI----GNLTNIQILKLNSNFFDGI----IPMEFGDCISLNTLDLGSNN---LNGCV 445 (885)
Q Consensus 377 ~~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~---l~~~~ 445 (885)
+..-+.|+.|+|++|+|...-...+ ..-+.|+.|+|++|.|... +-+.+..-+.|++|+|++|. +...
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~- 144 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ- 144 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH-
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHH-
Confidence 3444566666666666654333332 2335666666666666532 22344455567777776442 2100
Q ss_pred eEEEEeecCCcccCCCchhcccCCCCCEEeccCccc
Q 047790 446 VVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLL 481 (885)
Q Consensus 446 ~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 481 (885)
....+...+..-+.|+.|+++.|.+
T Consensus 145 -----------g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 145 -----------VEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp -----------HHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred -----------HHHHHHHHHHhCCCcCeEeccCCCc
Confidence 0002334455556666676665544
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0023 Score=69.34 Aligned_cols=139 Identities=17% Similarity=0.158 Sum_probs=80.9
Q ss_pred ceecccCCceEEEEEeC--------CCCeEEEEEecccccccHHHHHHHHHHhcccCC-CCccceeeeeEeCCeeEEEEe
Q 047790 667 NVIGGGGFRTAFKGTMP--------DQKTVAVKKLSQATGQCDREFAAEMETLDMVKH-QNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~--------~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e 737 (885)
+.+..|-...+|++... +++.+++|+.-. .........+|.++++.+.. .-..++++++.. .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 35666777888998764 257788888633 22235667789999988863 334566655542 28999
Q ss_pred cccCCCHH--------------HHHh---hc----CCCCC--HHHHHHHHHHHHH-------------------HHHH--
Q 047790 738 YMVNGSLD--------------DWLR---NR----AASLD--WGKRCKIAYGAAR-------------------GISF-- 773 (885)
Q Consensus 738 ~~~~~sL~--------------~~l~---~~----~~~~~--~~~~~~i~~~l~~-------------------~l~~-- 773 (885)
|++|..+. +.+. .. ..... +.++.++..++.. .+..
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 99875432 1111 11 11122 3445555444322 1222
Q ss_pred --Hh-ccCCCCceecCCCCCcEEEcCC----CcEEEeeccCccc
Q 047790 774 --LH-HGFKPYIIHMDIKTSNILLNDY----FEAKVSDFGLARL 810 (885)
Q Consensus 774 --LH-~~~~~~i~H~dlkp~Nil~~~~----~~vkl~Dfg~a~~ 810 (885)
+. ......++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 22 1123568999999999999876 6899999998864
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0049 Score=68.28 Aligned_cols=70 Identities=17% Similarity=0.231 Sum_probs=47.3
Q ss_pred ceecccCCceEEEEEeCC--------CCeEEEEEecccccccHHHHHHHHHHhcccCCCC-ccceeeeeEeCCeeEEEEe
Q 047790 667 NVIGGGGFRTAFKGTMPD--------QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQN-LVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~--------~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e 737 (885)
+.|+.|....+|++...+ ++.+++|+.... .....+..|.++++.+...+ .+++++.+. + .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence 456778888999998653 578888887432 12245668999988886333 356666543 2 38999
Q ss_pred cccCC
Q 047790 738 YMVNG 742 (885)
Q Consensus 738 ~~~~~ 742 (885)
|++|.
T Consensus 153 ~l~G~ 157 (429)
T 1nw1_A 153 YIPSR 157 (429)
T ss_dssp CCCEE
T ss_pred EeCCc
Confidence 99864
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0094 Score=63.78 Aligned_cols=68 Identities=7% Similarity=0.134 Sum_probs=43.6
Q ss_pred cccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccC---CCCccceeee------eEeCCeeEEEEeccc
Q 047790 670 GGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK---HQNLVQLLGY------CSVGEEKLLVYEYMV 740 (885)
Q Consensus 670 G~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~---~~~i~~~~~~------~~~~~~~~lv~e~~~ 740 (885)
|.|....||+....+| .+++|+...... ..|.++++.+. -|.|++++.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 3444688999987777 899998765431 34555555553 2324454432 234567899999998
Q ss_pred CCCH
Q 047790 741 NGSL 744 (885)
Q Consensus 741 ~~sL 744 (885)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8654
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.00044 Score=66.80 Aligned_cols=17 Identities=18% Similarity=0.319 Sum_probs=8.8
Q ss_pred CCCCCcEEEecCCcccc
Q 047790 260 NCSMLKYISLSNNKLSG 276 (885)
Q Consensus 260 ~l~~L~~L~Ls~N~l~~ 276 (885)
..+.|++|+|+.|.|.+
T Consensus 96 ~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 96 TSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HCSSCCEEECCSSBCCH
T ss_pred cCCccCeEecCCCcCCH
Confidence 33455555555555543
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0059 Score=64.83 Aligned_cols=141 Identities=11% Similarity=0.093 Sum_probs=78.6
Q ss_pred ceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCC--ccceeee------eEeCCeeEEEEec
Q 047790 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQN--LVQLLGY------CSVGEEKLLVYEY 738 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~--i~~~~~~------~~~~~~~~lv~e~ 738 (885)
+.++.|....+|+....++ .+++|...... ...++..|.++++.+.... +.+++.. ....+..+++|+|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 4567788889999987655 68889876531 2235566777777664221 3344321 2234667899999
Q ss_pred ccCCCHH-----H------H---Hhhc--C--CC----CC---HHHHHH------------HHHHHHHHHHHHhcc----
Q 047790 739 MVNGSLD-----D------W---LRNR--A--AS----LD---WGKRCK------------IAYGAARGISFLHHG---- 777 (885)
Q Consensus 739 ~~~~sL~-----~------~---l~~~--~--~~----~~---~~~~~~------------i~~~l~~~l~~LH~~---- 777 (885)
++|..+. . . ++.. . .. .. +..... +...+...++.++..
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 9885421 1 0 1110 0 00 01 111000 001133344444321
Q ss_pred CCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 778 ~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
...+++|+|+++.||+++++..+.++||+.+..
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 245799999999999999876568999998754
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0025 Score=57.41 Aligned_cols=56 Identities=27% Similarity=0.426 Sum_probs=33.2
Q ss_pred eEEccCCcCC-ccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCc
Q 047790 164 SLDFSGNGLN-GTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 164 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
.++.+++.++ ..+|..+. ++|++|+|++|+|+ .+|...|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 4555555554 23443222 34666666666666 666666666667777777766654
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.014 Score=64.80 Aligned_cols=72 Identities=14% Similarity=0.116 Sum_probs=45.6
Q ss_pred ceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCc-cceeeeeEeCCeeEEEEecccCCC
Q 047790 667 NVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNL-VQLLGYCSVGEEKLLVYEYMVNGS 743 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~~~s 743 (885)
+.|+.|-...+|++...+ ++.+++|+....... ..+..+|.++++.+...++ .++++++. + .+||||++|.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 456778888999998765 577888887443211 1123678888888875443 56666652 2 35999998743
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0074 Score=65.47 Aligned_cols=72 Identities=14% Similarity=0.124 Sum_probs=42.9
Q ss_pred ceecccCCceEEEEEeCC---------CCeEEEEEecccccccHHHHHHHHHHhcccCCCC-ccceeeeeEeCCeeEEEE
Q 047790 667 NVIGGGGFRTAFKGTMPD---------QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQN-LVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~---------~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~ 736 (885)
+.++.|....+|++...+ ++.+++|+....... ..+...|.++++.+.... +.++++.. . .++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 356677778899987654 267888886543211 123467888888776333 44666543 2 36899
Q ss_pred ecccCCC
Q 047790 737 EYMVNGS 743 (885)
Q Consensus 737 e~~~~~s 743 (885)
||++|..
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998753
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=95.33 E-value=0.076 Score=51.49 Aligned_cols=121 Identities=15% Similarity=0.099 Sum_probs=78.5
Q ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcccCC
Q 047790 743 SLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT 822 (885)
Q Consensus 743 sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~ 822 (885)
+|.++++..+.+++++++++++.|.+.++...-. ++.-..+=+.|..|++..+|.|...+ ..+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 8999999999999999999999999999887721 11112333456889999998887664 1110
Q ss_pred CCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCHHHHHHHHH
Q 047790 823 ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMM 882 (885)
Q Consensus 823 ~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~~~~~~l~~~~~~~~ 882 (885)
.....+.|||... ...+.+.-|||+|+++|..+-...|-+. +.+-...+-+.+..|-
T Consensus 98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e--E~eLS~~LE~LL~~Mt 154 (229)
T 2yle_A 98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE--ERELSPPLEQLIDHMA 154 (229)
T ss_dssp ---------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE--EECCCHHHHHHHHHHT
T ss_pred ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc--chhhCHHHHHHHHHHH
Confidence 1223456888753 4456788999999999999987777431 2223345555555553
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=94.96 E-value=0.047 Score=59.83 Aligned_cols=71 Identities=7% Similarity=0.051 Sum_probs=45.4
Q ss_pred eecccCCceEEEEEeCC--------CCeEEEEEecccccccHHHHHHHHHHhcccCC-CCccceeeeeEeCCeeEEEEec
Q 047790 668 VIGGGGFRTAFKGTMPD--------QKTVAVKKLSQATGQCDREFAAEMETLDMVKH-QNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~~~--------~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+..|....+|+....+ ++.+++++..... ....+..+|.++++.+.. .-..++++.+ . .++||||
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 45567778888887653 5778888864332 222234678888888753 3345555433 2 3789999
Q ss_pred ccCCC
Q 047790 739 MVNGS 743 (885)
Q Consensus 739 ~~~~s 743 (885)
++|..
T Consensus 152 I~G~~ 156 (424)
T 3mes_A 152 IDGEP 156 (424)
T ss_dssp CCSEE
T ss_pred eCCcc
Confidence 98864
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=89.51 E-value=1 Score=48.88 Aligned_cols=30 Identities=27% Similarity=0.369 Sum_probs=25.2
Q ss_pred CceecCCCCCcEEE------cCCCcEEEeeccCccc
Q 047790 781 YIIHMDIKTSNILL------NDYFEAKVSDFGLARL 810 (885)
Q Consensus 781 ~i~H~dlkp~Nil~------~~~~~vkl~Dfg~a~~ 810 (885)
.++|+|+.+.||++ ++...++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 3456799999999864
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 885 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 5e-53 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 4e-51 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 8e-50 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-49 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 7e-49 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 5e-48 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-46 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 5e-46 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-44 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-44 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-44 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 6e-44 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 7e-44 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 9e-44 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-43 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 3e-43 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-43 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 4e-43 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 1e-42 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 6e-42 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-41 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 2e-41 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 3e-41 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 6e-41 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 7e-41 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-40 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 9e-40 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-39 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-39 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 6e-39 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 8e-39 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 5e-38 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 9e-38 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 6e-36 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 6e-36 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-35 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-34 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-34 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 4e-34 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-34 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-33 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 2e-33 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-33 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-33 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 5e-33 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 7e-33 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 4e-32 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 5e-32 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-31 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-30 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-30 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 6e-30 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 8e-30 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 1e-29 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 3e-29 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 4e-26 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 7e-26 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 9e-26 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 1e-25 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 3e-25 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-17 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 9e-17 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-16 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-15 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 4e-14 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-10 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-25 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 4e-24 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-22 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-20 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-18 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-18 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-18 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-14 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-06 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 9e-21 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 3e-19 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 3e-16 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 3e-14 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 4e-14 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 7e-13 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-12 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 8e-12 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 3e-18 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-17 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-17 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 4e-17 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 6e-05 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-16 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 2e-11 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 3e-11 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 4e-07 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 4e-04 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 4e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-10 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 4e-10 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 9e-10 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 9e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 9e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 3e-08 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 4e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-09 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 5e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 9e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 6e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 9e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-04 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 4e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 9e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-04 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 8e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.002 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.003 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.004 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 1e-07 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 4e-06 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 6e-06 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 3e-07 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 9e-07 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 5e-06 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 7e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 8e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 2e-06 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 1e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 3e-04 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 3e-05 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.004 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 5e-05 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 1e-04 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 6e-04 | |
| d1m9la_ | 198 | c.10.3.1 (A:) Outer arm dynein light chain 1 {Gree | 0.001 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.002 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.004 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 184 bits (467), Expect = 5e-53
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 15/227 (6%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
I IG G F T +KG V + ++ T Q + F E+ L +H N++
Sbjct: 10 ITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
+GY + + +V ++ SL L + K IA A+G+ +LH I
Sbjct: 70 MGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSI 125
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-SHVSTDTADTIGYVPSEY---GQAGR 838
IH D+K++NI L++ K+ DFGLA + S SH + +I ++ E
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 839 ANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMKKE 885
+ + D+Y+FG++L EL+TG+ P N D ++ M+ +
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPY-------SNINNRDQIIFMVGRG 225
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 178 bits (453), Expect = 4e-51
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ +G G F + G VAVK L Q + F AE + ++HQ LV+L
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL 73
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLR-NRAASLDWGKRCKIAYGAARGISFLHHGFKPY 781
+ E ++ EYM NGSL D+L+ L K +A A G++F+
Sbjct: 74 YAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 129
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
IH D++ +NIL++D K++DFGLARLI D E I + E G
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 842 RGDIYSFGVILLELVTGKQPTGPEFEDKD 870
+ D++SFG++L E+VT + P + +
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (442), Expect = 8e-50
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ F +G G F G Q VA+K + + + + EF E + + + H+ LVQL
Sbjct: 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
G C+ ++ EYM NG L ++LR + ++ + +L
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQF 121
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER 842
+H D+ N L+ND KVSDFGL+R + D E S + + + P E + + +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 843 GDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMKKE 885
DI++FGV++ E+ + + F + + + L + +
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH 224
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 176 bits (446), Expect = 1e-49
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 8/199 (4%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQL 722
+ +G G FK + P +A K + R E++ L +V
Sbjct: 10 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGF 69
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
G E + E+M GSLD L+ + K++ +G+++L K I
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLRE--KHKI 126
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER 842
+H D+K SNIL+N E K+ DFG++ + D ++ T Y+ E Q + +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPERLQGTHYSVQ 183
Query: 843 GDIYSFGVILLELVTGKQP 861
DI+S G+ L+E+ G+ P
Sbjct: 184 SDIWSMGLSLVEMAVGRYP 202
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 171 bits (435), Expect = 7e-49
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 7/217 (3%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ F IG G F G ++ VA+K + + + +F E E + + H LVQL
Sbjct: 7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQL 65
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
G C LV+E+M +G L D+LR + + G + + + +
Sbjct: 66 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG---MAYLEEACV 122
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER 842
IH D+ N L+ + KVSDFG+ R + D + ST T + + E R + +
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 843 GDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
D++SFGV++ E+ + + +E++ +V+ +
Sbjct: 183 SDVWSFGVLMWEVFSEGKIP---YENRSNSEVVEDIS 216
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 170 bits (431), Expect = 5e-48
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 6/209 (2%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ E +G G F + GT VA+K L T F E + + ++H+ LVQL
Sbjct: 19 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL 77
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDD-WLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY 781
S E +V EYM GSL D L + +A A G++++
Sbjct: 78 YAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MN 133
Query: 782 IIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
+H D++ +NIL+ + KV+DFGLARLI D E I + E GR
Sbjct: 134 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 193
Query: 842 RGDIYSFGVILLELVTGKQPTGPEFEDKD 870
+ D++SFG++L EL T + P +++
Sbjct: 194 KSDVWSFGILLTELTTKGRVPYPGMVNRE 222
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (417), Expect = 4e-46
Identities = 51/225 (22%), Positives = 108/225 (48%), Gaps = 15/225 (6%)
Query: 662 IIVFENVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCDRE-FAAEMETLDMVKHQ 717
+++ + +G G F + +G +K VA+K L Q T + D E E + + + +
Sbjct: 10 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 69
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
+V+L+G C E +LV E G L +L + + ++ + + G+ +L
Sbjct: 70 YIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE- 127
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD--TIGYVPSEYGQ 835
+H D+ N+LL + AK+SDFGL++ + +S+ + +A + + E
Sbjct: 128 --KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 185
Query: 836 AGRANERGDIYSFGVILLELVT-GKQPTGPEFEDKDGGNLVDWVL 879
+ + R D++S+GV + E ++ G++P ++ G ++ ++
Sbjct: 186 FRKFSSRSDVWSYGVTMWEALSYGQKP----YKKMKGPEVMAFIE 226
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 165 bits (418), Expect = 5e-46
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 15/227 (6%)
Query: 662 IIVFENVIGGGGFRTAFKGTMPDQKT----VAVKKLSQATGQCD-REFAAEMETLDMVKH 716
I+ F VIG G F + GT+ D AVK L++ T + +F E + H
Sbjct: 28 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 717 QNLVQLLGYCSVGEEK-LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
N++ LLG C E L+V YM +G L +++RN + A+G +
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG---MK 144
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE---SHVSTDTADTIGYVPSE 832
+H D+ N +L++ F KV+DFGLAR + D E H T + ++ E
Sbjct: 145 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 204
Query: 833 YGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
Q + + D++SFGV+L EL+T P + D + ++ ++L
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAPP---YPDVNTFDITVYLL 248
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 161 bits (407), Expect = 1e-44
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 15/226 (6%)
Query: 663 IVFENVIGGGGFRTAFKGTMP----DQKTVAVKKL-SQATGQCDREFAAEMETLDMVKHQ 717
+ E VIG G F G + + VA+K L S T + R+F +E + H
Sbjct: 28 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 87
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
N++ L G + +++ E+M NGSLD +LR + + G A G+ +L
Sbjct: 88 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD- 146
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD----TIGYVPSEY 833
+H D+ NIL+N KVSDFGL+R + D S + +A I + E
Sbjct: 147 --MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 204
Query: 834 GQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
Q + D++S+G+++ E+++ + + D ++++ +
Sbjct: 205 IQYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMTNQDVINAIE 247
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 159 bits (404), Expect = 2e-44
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 9/218 (4%)
Query: 663 IVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQ 721
I ++ +GGG + ++G TVAVK L + T + EF E + +KH NLVQ
Sbjct: 19 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQ 77
Query: 722 LLGYCSVGEEKLLVYEYMVNGSLDDWL-RNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
LLG C+ ++ E+M G+L D+L + +A + + +L K
Sbjct: 78 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KK 134
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
IH D+ N L+ + KV+DFGL+RL++ I + E + +
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 194
Query: 841 ERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWV 878
+ D+++FGV+L E+ T + D + + +
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSP---YPGIDLSQVYELL 229
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (401), Expect = 4e-44
Identities = 51/225 (22%), Positives = 82/225 (36%), Gaps = 15/225 (6%)
Query: 665 FENVIGGGGFRTAFKGTM-PDQKTVAVKKL--SQATGQCDREFAAEMETLDMVKHQNLVQ 721
IG G + K D K + K+L T + +E+ L +KH N+V+
Sbjct: 8 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 67
Query: 722 LLGYCSVGEEKLL--VYEYMVNGSLDDWLRNRAAS---LDWGKRCKIAYGAARGISFLH- 775
L V EY G L + LD ++ + H
Sbjct: 68 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 127
Query: 776 -HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834
++H D+K +N+ L+ K+ DFGLAR+++ ++ + T Y+ E
Sbjct: 128 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKAFVGTPYYMSPEQM 186
Query: 835 QAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
NE+ DI+S G +L EL P F L +
Sbjct: 187 NRMSYNEKSDIWSLGCLLYELCALMPP----FTAFSQKELAGKIR 227
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (399), Expect = 6e-44
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ IG G F G K VAVK + + F AE + ++H NLVQL
Sbjct: 9 LKLLQTIGKGEFGDVMLGDYRGNK-VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQL 65
Query: 723 LGYCSVGEEKL-LVYEYMVNGSLDDWLRNRAAS-LDWGKRCKIAYGAARGISFLHHGFKP 780
LG + L +V EYM GSL D+LR+R S L K + + +L
Sbjct: 66 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GN 122
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
+H D+ N+L+++ AKVSDFGL + S + + + E + + +
Sbjct: 123 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL----PVKWTAPEALREKKFS 178
Query: 841 ERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
+ D++SFG++L E+ + + P KD
Sbjct: 179 TKSDVWSFGILLWEIYSFGRVPYPRIPLKD 208
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 159 bits (402), Expect = 7e-44
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCD---REFAAEMETLDMVKHQNLVQL 722
IG G F + + + + VA+KK+S + Q + ++ E+ L ++H N +Q
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
G LV EY + + D ++ L + + +GA +G+++LH +
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLH---SHNM 136
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY---GQAGRA 839
IH D+K NILL++ K+ DFG A +++ S V T ++ E G+
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG-----TPYWMAPEVILAMDEGQY 191
Query: 840 NERGDIYSFGVILLELVTGKQP 861
+ + D++S G+ +EL K P
Sbjct: 192 DGKVDVWSLGITCIELAERKPP 213
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (400), Expect = 9e-44
Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 10/203 (4%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLL 723
+G G F +K A K + + + ++ E++ L H N+V+LL
Sbjct: 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
++ E+ G++D + L + + +++LH II
Sbjct: 76 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKII 132
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY-----GQAGR 838
H D+K NIL + K++DFG++ + + T ++ E +
Sbjct: 133 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS-FIGTPYWMAPEVVMCETSKDRP 191
Query: 839 ANERGDIYSFGVILLELVTGKQP 861
+ + D++S G+ L+E+ + P
Sbjct: 192 YDYKADVWSLGITLIEMAEIEPP 214
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (400), Expect = 1e-43
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 25/243 (10%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
IV + IG G F ++G ++ VAVK S + AE+ M++H+N++
Sbjct: 5 IVLQESIGKGRFGEVWRGKWRGEE-VAVKIFSSREER-SWFREAEIYQTVMLRHENILGF 62
Query: 723 LGYCS----VGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF 778
+ + + LV +Y +GSL D+L ++ K+A A G++ LH
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEI 120
Query: 779 -----KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT---ADTIGYVP 830
KP I H D+K+ NIL+ ++D GLA + T Y+
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 831 SEY------GQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD---GGNLVDWVLLM 881
E + + +R DIY+ G++ E+ G + + D +
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240
Query: 882 MKK 884
M+K
Sbjct: 241 MRK 243
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (395), Expect = 3e-43
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 11/222 (4%)
Query: 663 IVFENVIGGGGFRTAFKGTMPD-----QKTVAVKKLSQATGQCDR-EFAAEMETLDMVKH 716
+ + VIG G F +KG + + VA+K L + R +F E + H
Sbjct: 9 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 68
Query: 717 QNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH 776
N+++L G S + +++ EYM NG+LD +LR + + + G A G+ +
Sbjct: 69 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM---KY 125
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD--TIGYVPSEYG 834
+H D+ NIL+N KVSDFGL+R++ D T + I + E
Sbjct: 126 LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 185
Query: 835 QAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVD 876
+ D++SFG+++ E++T + E + + ++
Sbjct: 186 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN 227
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (394), Expect = 3e-43
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 14/205 (6%)
Query: 665 FENVIGGGGFRTAFKGTMPD-QKTVAVKKLS--QATGQCDREFAAEMETLDMVKHQNLVQ 721
F+ IG G F+T +KG + VA +L + T + F E E L ++H N+V+
Sbjct: 13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 72
Query: 722 LLGYCSVGEEK----LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
+ +LV E M +G+L +L+ + +G+ FLH
Sbjct: 73 FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR 131
Query: 778 FKPYIIHMDIKTSNILLND-YFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQA 836
P IIH D+K NI + K+ D GLA L + + T ++ E +
Sbjct: 132 -TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK---RASFAKAVIGTPEFMAPEMYE- 186
Query: 837 GRANERGDIYSFGVILLELVTGKQP 861
+ +E D+Y+FG+ +LE+ T + P
Sbjct: 187 EKYDESVDVYAFGMCMLEMATSEYP 211
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (396), Expect = 4e-43
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 7/196 (3%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGY 725
IG G T + + + VA+++++ E+ + K+ N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 726 CSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHM 785
VG+E +V EY+ GSL D + +D G+ + + + FLH +IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHR 140
Query: 786 DIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDI 845
DIK+ NILL K++DFG I E + T ++ E + DI
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 846 YSFGVILLELVTGKQP 861
+S G++ +E++ G+ P
Sbjct: 200 WSLGIMAIEMIEGEPP 215
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (389), Expect = 1e-42
Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 9/213 (4%)
Query: 663 IVFENVIGGGGFRTAFKGTMPDQK----TVAVKKLSQATGQCDRE-FAAEMETLDMVKHQ 717
I IG G F +G + VA+K T RE F E T+ H
Sbjct: 9 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
++V+L+G + ++ E G L +L+ R SLD AY + +++L
Sbjct: 69 HIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 125
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG 837
+H DI N+L++ K+ DFGL+R + D + ++ I ++ E
Sbjct: 126 -SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 838 RANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
R D++ FGV + E++ ++ D
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 217
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (385), Expect = 6e-42
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 15/221 (6%)
Query: 666 ENVIGGGGFRTAFKGTMPDQKT---VAVKKLSQATGQCD--REFAAEMETLDMVKHQNLV 720
+ +G G F T KG +K VAVK L E AE + + + +V
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
+++G C E +LV E G L+ +L+ + ++ + + G+ +L
Sbjct: 72 RMIGICEA-ESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEE---S 126
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD--TIGYVPSEYGQAGR 838
+H D+ N+LL AK+SDFGL++ + E++ T + + E +
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 839 ANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
+ + D++SFGV++ E + Q + G + +
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKP---YRGMKGSEVTAMLE 224
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 152 bits (385), Expect = 1e-41
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 37/248 (14%)
Query: 663 IVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQCDR-EFAAEMETLDMVK 715
I + IG G F F+ P VAVK L + + +F E +
Sbjct: 15 IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD 74
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR-----------------------A 752
+ N+V+LLG C+VG+ L++EYM G L+++LR+
Sbjct: 75 NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 134
Query: 753 ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812
L ++ IA A G+++L +H D+ T N L+ + K++DFGL+R I
Sbjct: 135 PPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIY 191
Query: 813 DCE-SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDG 871
+ + A I ++P E R D++++GV+L E+ + +
Sbjct: 192 SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP---YYGMAH 248
Query: 872 GNLVDWVL 879
++ +V
Sbjct: 249 EEVIYYVR 256
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (383), Expect = 2e-41
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 28/237 (11%)
Query: 663 IVFENVIGGGGFRTAFKGTMPD---QKTVAVKKLSQ-ATGQCDREFAAEMETL-DMVKHQ 717
I F++VIG G F K + + A+K++ + A+ R+FA E+E L + H
Sbjct: 12 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 71
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR---------------AASLDWGKRCK 762
N++ LLG C L EY +G+L D+LR A++L +
Sbjct: 72 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131
Query: 763 IAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT 822
A ARG + + + IH D+ NIL+ + + AK++DFGL+R
Sbjct: 132 FAADVARG---MDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL 188
Query: 823 ADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
+ ++ E D++S+GV+L E+V+ + L + +
Sbjct: 189 --PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP---YCGMTCAELYEKLP 240
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (379), Expect = 3e-41
Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 15/219 (6%)
Query: 665 FENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQA---TGQCDREFAAEMETLDMVKHQNLV 720
+G G F + + +A+K L +A + + E+E ++H N++
Sbjct: 10 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 69
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
+L GY L+ EY G++ L+ + + D + A +S+ H
Sbjct: 70 RLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCH---SK 125
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
+IH DIK N+LL E K++DFG + T+ Y+P E + +
Sbjct: 126 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT---TLCGTLDYLPPEMIEGRMHD 182
Query: 841 ERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
E+ D++S GV+ E + GK P FE +
Sbjct: 183 EKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRIS 217
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 152 bits (384), Expect = 6e-41
Identities = 42/200 (21%), Positives = 79/200 (39%), Gaps = 8/200 (4%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLL 723
+G G F + T A K + E++T+ +++H LV L
Sbjct: 30 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 89
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
E +++YE+M G L + + + + + + +G+ +H + +
Sbjct: 90 DAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYV 146
Query: 784 HMDIKTSNILLNDYF--EAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
H+D+K NI+ E K+ DFGL + +S T T + E +
Sbjct: 147 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV--TTGTAEFAAPEVAEGKPVGY 204
Query: 842 RGDIYSFGVILLELVTGKQP 861
D++S GV+ L++G P
Sbjct: 205 YTDMWSVGVLSYILLSGLSP 224
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (380), Expect = 7e-41
Identities = 61/234 (26%), Positives = 97/234 (41%), Gaps = 29/234 (12%)
Query: 663 IVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVK 715
+ F +G G F + T TVAVK L + +RE +E++ L +
Sbjct: 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84
Query: 716 -HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR-----------------AASLDW 757
H N+V LLG C++G L++ EY G L ++LR + +LD
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 758 GKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817
+Y A+G++FL IH D+ NILL K+ DFGLAR I + ++
Sbjct: 145 EDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 818 -VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKD 870
V + + ++ E D++S+G+ L EL + P
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (376), Expect = 1e-40
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 8/199 (4%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQL 722
+G G + ++ VAVK + C E+ M+ H+N+V+
Sbjct: 9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 68
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
G+ G + L EY G L D + + + + G+ +LH I
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHG---IGI 124
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLI-SDCESHVSTDTADTIGYVPSEYGQAGR-AN 840
H DIK N+LL++ K+SDFGLA + + + T+ YV E +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 841 ERGDIYSFGVILLELVTGK 859
E D++S G++L ++ G+
Sbjct: 185 EPVDVWSCGIVLTAMLAGE 203
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (370), Expect = 9e-40
Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 9/202 (4%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCD---REFAAEMETLDMVKHQNLV 720
F ++G G F T + + A+K L + + E + + + H V
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
+L E+ Y NG L ++ + S D + +LH
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GK 127
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT-ADTIGYVPSEYGQAGRA 839
IIH D+K NILLN+ +++DFG A+++S ++ T YV E A
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 187
Query: 840 NERGDIYSFGVILLELVTGKQP 861
+ D+++ G I+ +LV G P
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPP 209
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (371), Expect = 2e-39
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 34/230 (14%)
Query: 663 IVFENVIGGGGFRTAFKGTMPD------QKTVAVKKLSQATGQCDRE-FAAEMETL-DMV 714
+ F V+G G F T VAVK L + +RE +E++ + +
Sbjct: 39 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG 98
Query: 715 KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR----------------------A 752
H+N+V LLG C++ L++EY G L ++LR++
Sbjct: 99 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 158
Query: 753 ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812
L + AY A+G+ FL +H D+ N+L+ K+ DFGLAR I
Sbjct: 159 NVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 215
Query: 813 DCESHVSTDTAD-TIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQP 861
++V A + ++ E G + D++S+G++L E+ +
Sbjct: 216 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 265
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (367), Expect = 5e-39
Identities = 42/219 (19%), Positives = 87/219 (39%), Gaps = 13/219 (5%)
Query: 664 VFENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
+ +G G F + +KT K + G E+ L++ +H+N++ L
Sbjct: 8 MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK-VKGTDQVLVKKEISILNIARHRNILHL 66
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
EE ++++E++ + + + A L+ + + + FLH I
Sbjct: 67 HESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNI 123
Query: 783 IHMDIKTSNILL--NDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
H DI+ NI+ K+ +FG AR + ++ T Y E Q +
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT--APEYYAPEVHQHDVVS 181
Query: 841 ERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
D++S G ++ L++G P F + +++ ++
Sbjct: 182 TATDMWSLGTLVYVLLSGINP----FLAETNQQIIENIM 216
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (362), Expect = 6e-39
Identities = 53/224 (23%), Positives = 84/224 (37%), Gaps = 16/224 (7%)
Query: 665 FENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQ---ATGQCDREFAAEMETLDMVKHQ 717
+G G F +G +VAVK L + + +F E+ + + H+
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
NL++L G K+ V E GSL D LR G + A A G+ +L
Sbjct: 72 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES- 129
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD--TIGYVPSEYGQ 835
IH D+ N+LL K+ DFGL R + + H + E +
Sbjct: 130 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 836 AGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
+ D + FGV L E+ T Q + +G ++ +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKID 228
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 145 bits (368), Expect = 8e-39
Identities = 39/200 (19%), Positives = 73/200 (36%), Gaps = 8/200 (4%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLL 723
+G G F + + K ++ E+ ++ + H L+ L
Sbjct: 33 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLH 92
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
E +L+ E++ G L D + + + A G+ +H + I+
Sbjct: 93 DAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIV 149
Query: 784 HMDIKTSNILL--NDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANE 841
H+DIK NI+ K+ DFGLA ++ + T T + E
Sbjct: 150 HLDIKPENIMCETKKASSVKIIDFGLATKLNP--DEIVKVTTATAEFAAPEIVDREPVGF 207
Query: 842 RGDIYSFGVILLELVTGKQP 861
D+++ GV+ L++G P
Sbjct: 208 YTDMWAIGVLGYVLLSGLSP 227
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (358), Expect = 5e-38
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 23/234 (9%)
Query: 663 IVFENVIGGGGFRTAFKGT------MPDQKTVAVKKLSQATGQCDR-EFAAEMETLDMVK 715
I +G G F ++G + VA+K +++A +R EF E +
Sbjct: 22 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 81
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR---------AASLDWGKRCKIAYG 766
++V+LLG S G+ L++ E M G L +LR+ A K ++A
Sbjct: 82 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 141
Query: 767 AARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD-T 825
A G+++L+ +H D+ N ++ + F K+ DFG+ R I + + +
Sbjct: 142 IADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 198
Query: 826 IGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
+ ++ E + G D++SFGV+L E+ T + ++ ++ +V+
Sbjct: 199 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP---YQGLSNEQVLRFVM 249
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (357), Expect = 9e-38
Identities = 50/221 (22%), Positives = 97/221 (43%), Gaps = 14/221 (6%)
Query: 665 FENVIGGGGFRTAFKGTMPDQKT-----VAVKKLSQAT-GQCDREFAAEMETLDMVKHQN 718
V+G G F T +KG + VA+K+L +AT + ++E E + V + +
Sbjct: 13 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 72
Query: 719 LVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF 778
+ +LLG C + L+ + M G L D++R ++ A+G+++L
Sbjct: 73 VCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED-- 129
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTAD-TIGYVPSEYGQAG 837
++H D+ N+L+ K++DFGLA+L+ E + I ++ E
Sbjct: 130 -RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 188
Query: 838 RANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWV 878
+ D++S+GV + EL+T ++ + +
Sbjct: 189 IYTHQSDVWSYGVTVWELMTFGSKP---YDGIPASEISSIL 226
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 137 bits (347), Expect = 6e-36
Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 15/205 (7%)
Query: 665 FENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQA---TGQCDREFAAEMETLDMVK---HQ 717
+IG GGF + D K A+K L + Q + E L +V
Sbjct: 8 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 67
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
+V + ++ + + M G L L A G+ +H+
Sbjct: 68 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF-SEADMRFYAAEIILGLEHMHN- 125
Query: 778 FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAG 837
++++ D+K +NILL+++ ++SD GLA S + H + T GY+ E Q G
Sbjct: 126 --RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTHGYMAPEVLQKG 180
Query: 838 RA-NERGDIYSFGVILLELVTGKQP 861
A + D +S G +L +L+ G P
Sbjct: 181 VAYDSSADWFSLGCMLFKLLRGHSP 205
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 136 bits (343), Expect = 6e-36
Identities = 48/217 (22%), Positives = 85/217 (39%), Gaps = 9/217 (4%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQL 722
F +V+G G F QK VA+K +++ + E+ L +KH N+V L
Sbjct: 13 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL 72
Query: 723 LGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYI 782
G L+ + + G L D + + ++ + + +LH +
Sbjct: 73 DDIYESGGHLYLIMQLVSGGELFDRIVEK-GFYTERDASRLIFQVLDAVKYLHDLGIVHR 131
Query: 783 IHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANER 842
L++ + +SDFGL+++ V + T GYV E ++
Sbjct: 132 DLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPEVLAQKPYSKA 189
Query: 843 GDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
D +S GVI L+ G P F D++ L + +L
Sbjct: 190 VDCWSIGVIAYILLCGYPP----FYDENDAKLFEQIL 222
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (338), Expect = 2e-35
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 32/242 (13%)
Query: 663 IVFENVIGGGGFRTAFKGTMP--------DQKTVAVKKLSQATGQCD-REFAAEMETLDM 713
+V +G G F VAVK L + D + +EME + M
Sbjct: 15 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 74
Query: 714 V-KHQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNR---------------AASLDW 757
+ KH+N++ LLG C+ ++ EY G+L ++L+ R L
Sbjct: 75 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 134
Query: 758 GKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817
AY ARG+ +L IH D+ N+L+ + K++DFGLAR I + +
Sbjct: 135 KDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 818 VSTDTAD-TIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVD 876
T + ++ E + D++SFGV+L E+ T + L
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP---YPGVPVEELFK 248
Query: 877 WV 878
+
Sbjct: 249 LL 250
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (333), Expect = 2e-34
Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 14/221 (6%)
Query: 664 VFENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE---FAAEMETLDMV-KHQN 718
+ ++G G F F + A+K L + D + E L + +H
Sbjct: 5 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 64
Query: 719 LVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF 778
L + E V EY+ G L +++ D + A G L
Sbjct: 65 LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILG---LQFLH 120
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGR 838
I++ D+K NILL+ K++DFG+ + ++ +T T Y+ E +
Sbjct: 121 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT-FCGTPDYIAPEILLGQK 179
Query: 839 ANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
N D +SFGV+L E++ G+ P F +D L +
Sbjct: 180 YNHSVDWWSFGVLLYEMLIGQSP----FHGQDEEELFHSIR 216
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (330), Expect = 2e-34
Identities = 43/198 (21%), Positives = 73/198 (36%), Gaps = 6/198 (3%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKL--SQATGQCDREFAAEMETLDMVKHQNLVQLL 723
IG G + +K + VA+KK+ T E+ L + H N+V+LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
+ LV+E++ + + + +G L ++
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG---LAFCHSHRVL 124
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERG 843
H D+K N+L+N K++DFGLAR + + P +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 844 DIYSFGVILLELVTGKQP 861
DI+S G I E+VT +
Sbjct: 185 DIWSLGCIFAEMVTRRAL 202
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (327), Expect = 4e-34
Identities = 54/247 (21%), Positives = 94/247 (38%), Gaps = 34/247 (13%)
Query: 663 IVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATGQCD-REFAAEMETLDMVK 715
+ +G G F + +TVAVK L + + R +E++ L +
Sbjct: 15 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 74
Query: 716 HQNLVQLLGYCSV--GEEKLLVYEYMVNGSLDDWLRNR---------------AASLDWG 758
H V L G +++ E+ G+L +LR++ L
Sbjct: 75 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 134
Query: 759 KRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818
++ A+G+ FL IH D+ NILL++ K+ DFGLAR I +V
Sbjct: 135 HLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 191
Query: 819 STDTA-DTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDW 877
A + ++ E + D++SFGV+L E+ + P G + +
Sbjct: 192 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVKIDEE 245
Query: 878 VLLMMKK 884
+K+
Sbjct: 246 FCRRLKE 252
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 129 bits (326), Expect = 4e-34
Identities = 54/232 (23%), Positives = 90/232 (38%), Gaps = 27/232 (11%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATG---------QCDREFAAEMETLDMV 714
+ ++G G + P K AVK + G + E++ L V
Sbjct: 7 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 66
Query: 715 K-HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISF 773
H N++QL LV++ M G L D+L + +L + KI I
Sbjct: 67 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICA 125
Query: 774 LHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY 833
LH K I+H D+K NILL+D K++DFG + + + T Y+ E
Sbjct: 126 LH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--GEKLREVCGTPSYLAPEI 180
Query: 834 GQAGRANERG------DIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
+ + D++S GVI+ L+ G P F + ++ ++
Sbjct: 181 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP----FWHRKQMLMLRMIM 228
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 129 bits (326), Expect = 1e-33
Identities = 44/201 (21%), Positives = 79/201 (39%), Gaps = 12/201 (5%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE---FAAEMETLDMVKHQNLV 720
+G G F + + A+K L + ++ E L +V H ++
Sbjct: 8 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFII 67
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
++ G ++ ++ +Y+ G L LR + AA L +
Sbjct: 68 RMWGTFQDAQQIFMIMDYIEGGELFSLLRKS----QRFPNPVAKFYAAEVCLALEYLHSK 123
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
II+ D+K NILL+ K++DFG A+ + D T Y+ E N
Sbjct: 124 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT----YTLCGTPDYIAPEVVSTKPYN 179
Query: 841 ERGDIYSFGVILLELVTGKQP 861
+ D +SFG+++ E++ G P
Sbjct: 180 KSIDWWSFGILIYEMLAGYTP 200
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 128 bits (322), Expect = 2e-33
Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 14/207 (6%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCD---REFAAEMETLDMVKHQNLV 720
++G GG + + VAVK L + F E + + H +V
Sbjct: 11 LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 70
Query: 721 QLLGYC----SVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHH 776
+ G +V EY+ +L D + + + ++ A + L+
Sbjct: 71 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQA---LNF 126
Query: 777 GFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV--STDTADTIGYVPSEYG 834
+ IIH D+K +NI+++ KV DFG+AR I+D + V + T Y+ E
Sbjct: 127 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 186
Query: 835 QAGRANERGDIYSFGVILLELVTGKQP 861
+ + R D+YS G +L E++TG+ P
Sbjct: 187 RGDSVDARSDVYSLGCVLYEVLTGEPP 213
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 128 bits (322), Expect = 2e-33
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 6/197 (3%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTVAVKKL--SQATGQCDREFAAEMETLDMVKHQNLVQLLG 724
IG G + +K +T A+KK+ + E+ L +KH N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIH 784
+ +LV+E++ + L L L+ GI++ H ++H
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLH 123
Query: 785 MDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGD 844
D+K N+L+N E K++DFGLAR + + P + + + D
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTID 183
Query: 845 IYSFGVILLELVTGKQP 861
I+S G I E+V G
Sbjct: 184 IWSVGCIFAEMVNGTPL 200
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (324), Expect = 4e-33
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 14/204 (6%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE-FAAEMETLDMVKHQNLVQLLG 724
+ IG G + ++ VA+KK+S Q + E++ L +H+N++ +
Sbjct: 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 73
Query: 725 YCSVGEEKLLVYEYMVN----GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
+ + Y+V L L+ + L C Y RG+ ++H
Sbjct: 74 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SA 128
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDT--ADTIGYVPSEYGQAGR 838
++H D+K SN+LLN + K+ DFGLAR+ H T T Y E +
Sbjct: 129 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 188
Query: 839 A-NERGDIYSFGVILLELVTGKQP 861
+ DI+S G IL E+++ +
Sbjct: 189 GYTKSIDIWSVGCILAEMLSNRPI 212
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (320), Expect = 5e-33
Identities = 48/207 (23%), Positives = 79/207 (38%), Gaps = 17/207 (8%)
Query: 667 NVIGGGGFRTAFKGT--MPDQKTVAVKKLSQATGQCDRE-----FAAEMETLDMVKHQNL 719
IG G + FK + VA+K++ TG+ A + L+ +H N+
Sbjct: 13 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72
Query: 720 VQLLGYCSVGEEKLLVYEYMV-----NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFL 774
V+L C+V +V + + + + RG+ FL
Sbjct: 73 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 132
Query: 775 HHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834
H ++H D+K NIL+ + K++DFGLAR+ S + T T+ Y E
Sbjct: 133 HSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVVTLWYRAPEVL 187
Query: 835 QAGRANERGDIYSFGVILLELVTGKQP 861
D++S G I E+ K
Sbjct: 188 LQSSYATPVDLWSVGCIFAEMFRRKPL 214
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (319), Expect = 7e-33
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 12/202 (5%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKL-----SQATGQCDREFAAEMETLDMVKHQNLV 720
+ +G G F T +K + VA+KK+ S+A +R E++ L + H N++
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
LL LV+++M N L +G+ +LH +
Sbjct: 64 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSL-VLTPSHIKAYMLMTLQGLEYLH---QH 119
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSE-YGQAGRA 839
+I+H D+K +N+LL++ K++DFGLA+ + T T Y E A
Sbjct: 120 WILHRDLKPNNLLLDENGVLKLADFGLAKSFGS-PNRAYTHQVVTRWYRAPELLFGARMY 178
Query: 840 NERGDIYSFGVILLELVTGKQP 861
D+++ G IL EL+
Sbjct: 179 GVGVDMWAVGCILAELLLRVPF 200
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (316), Expect = 4e-32
Identities = 52/207 (25%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 665 FENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLL 723
VIG G F ++ + D + VA+KK+ Q R E++ + + H N+V+L
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRLR 79
Query: 724 GYCSVGEEK------LLVYEYMVNGSLDDWLR--NRAASLDWGKRCKIAYGAARGISFLH 775
+ EK LV +Y+ +L Y R ++++H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 776 HGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834
I H DIK N+LL+ D K+ DFG A+ + E +VS P
Sbjct: 140 S---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIF 195
Query: 835 QAGRANERGDIYSFGVILLELVTGKQP 861
A D++S G +L EL+ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPI 222
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 124 bits (312), Expect = 5e-32
Identities = 41/231 (17%), Positives = 78/231 (33%), Gaps = 19/231 (8%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLL 723
IG G F + GT + + VA+K T + E + M++ + +
Sbjct: 11 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTI 68
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
+C + ++ ++ SL+D + +A I ++H I
Sbjct: 69 RWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFI 125
Query: 784 HMDIKTSNILLND---YFEAKVSDFGLARLISDCESHV------STDTADTIGYVPSEYG 834
H D+K N L+ + DFGLA+ D +H + + T Y
Sbjct: 126 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH 185
Query: 835 QAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMKKE 885
+ R D+ S G +L+ G ++ + +K+
Sbjct: 186 LGIEQSRRDDLESLGYVLMYFNLGS----LPWQGLKAATKRQKYERISEKK 232
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (310), Expect = 2e-31
Identities = 48/230 (20%), Positives = 86/230 (37%), Gaps = 22/230 (9%)
Query: 664 VFENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQL 722
V V+G G + Q+ A+K L + RE ++V++
Sbjct: 15 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREVELHWRASQ---CPHIVRI 70
Query: 723 LGYC---SVGEEKL-LVYEYMVNGSLDDWLRNRAA-SLDWGKRCKIAYGAARGISFLHHG 777
+ G + L +V E + G L +++R + + +I I +LH
Sbjct: 71 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH-- 128
Query: 778 FKPYIIHMDIKTSNILLNDYFE---AKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834
I H D+K N+L K++DFG A+ + S + T YV E
Sbjct: 129 -SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC--YTPYYVAPEVL 185
Query: 835 QAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMKK 884
+ ++ D++S GVI+ L+ G P F G + + ++
Sbjct: 186 GPEKYDKSCDMWSLGVIMYILLCGYPP----FYSNHGLAISPGMKTRIRM 231
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (300), Expect = 2e-30
Identities = 47/208 (22%), Positives = 77/208 (37%), Gaps = 17/208 (8%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDR------EFAAEMETLDMVKHQ 717
+G G F K A K + + + R + E+ L ++H
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 718 NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG 777
N++ L + +L+ E + G L D+L + SL + + G +++
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNG---VYYL 129
Query: 778 FKPYIIHMDIKTSNILLNDY----FEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEY 833
I H D+K NI+L D K+ DFGLA I + T +V E
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEI 187
Query: 834 GQAGRANERGDIYSFGVILLELVTGKQP 861
D++S GVI L++G P
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASP 215
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 119 bits (299), Expect = 2e-30
Identities = 36/209 (17%), Positives = 70/209 (33%), Gaps = 17/209 (8%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLL 723
IG G F F+GT + + + VA+K + + + E T ++ + +
Sbjct: 9 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNV 66
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
Y ++ ++ SL+D L A + +H ++
Sbjct: 67 YYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLV 123
Query: 784 HMDIKTSNILLNDYFE-----AKVSDFGLARLISDCESHVSTDTAD------TIGYVPSE 832
+ DIK N L+ V DFG+ + D + + T Y+
Sbjct: 124 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSIN 183
Query: 833 YGQAGRANERGDIYSFGVILLELVTGKQP 861
+ R D+ + G + + + G P
Sbjct: 184 THLGREQSRRDDLEALGHVFMYFLRGSLP 212
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (295), Expect = 6e-30
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 17/208 (8%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE------FAAEMETLDMVK-- 715
++G GGF + + G + D VA+K + + E E+ L V
Sbjct: 8 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 716 HQNLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
+++LL + + +L+ E +L + +
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA---VR 124
Query: 776 HGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYG 834
H ++H DIK NIL++ + E K+ DFG L+ D V TD T Y P E+
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDFDGTRVYSPPEWI 181
Query: 835 QAGRANERG-DIYSFGVILLELVTGKQP 861
+ R + R ++S G++L ++V G P
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIP 209
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (296), Expect = 8e-30
Identities = 47/210 (22%), Positives = 83/210 (39%), Gaps = 19/210 (9%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKL--SQATGQCDREFAAEMETLDMVKHQNLVQLL 723
IG G F FK + VA+KK+ E++ L ++KH+N+V L+
Sbjct: 16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 75
Query: 724 GYCSVGEEK--------LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
C LV+++ + + ++ G L+
Sbjct: 76 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-KFTLSEIKRVMQMLLNG---LY 131
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES---HVSTDTADTIGYVPSE 832
+ + I+H D+K +N+L+ K++DFGLAR S ++ + T+ T+ Y P E
Sbjct: 132 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPE 191
Query: 833 YGQAGRA-NERGDIYSFGVILLELVTGKQP 861
R D++ G I+ E+ T
Sbjct: 192 LLLGERDYGPPIDLWGAGCIMAEMWTRSPI 221
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (294), Expect = 1e-29
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 7/222 (3%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKL--SQATGQCDREFAAEMETLDMVKHQNLVQLL 723
IG G + T FK + VA+K++ E+ L +KH+N+V+L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
++ LV+E+ + D + +G+ F H ++
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL-DPEIVKSFLFQLLKGLGFCHS---RNVL 123
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERG 843
H D+K N+L+N E K+++FGLAR S + P A +
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 844 DIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVLLMMKKE 885
D++S G I EL +P P + D + +L +E
Sbjct: 184 DMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEE 225
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (293), Expect = 3e-29
Identities = 44/219 (20%), Positives = 79/219 (36%), Gaps = 13/219 (5%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE---FAAEMETLDMVKHQNLV 720
+ ++G G F + A+K L + E E L +H L
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 721 QLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
L + V EY G L L + + + A +S L +
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE----RARFYGAEIVSALEYLHSR 124
Query: 781 YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRAN 840
+++ DIK N++L+ K++DFGL + + T Y+ E +
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-MKTFCGTPEYLAPEVLEDNDYG 183
Query: 841 ERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
D + GV++ E++ G+ P F ++D L + +L
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLP----FYNQDHERLFELIL 218
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (270), Expect = 4e-26
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQ--ATGQCDREFAAEMETLDMVKHQNLVQLLG 724
+G G + VA+KKL + + + E+ L ++H+N++ LL
Sbjct: 25 PVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD 84
Query: 725 YCSVGE------EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF 778
+ E + LV +M L +++ L + + Y +G+ ++H
Sbjct: 85 VFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH--- 138
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGR 838
IIH D+K N+ +N+ E K+ DFGLAR +S ++ P R
Sbjct: 139 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQA---DSEMTGYVVTRWYRAPEVILNWMR 195
Query: 839 ANERGDIYSFGVILLELVTGKQP 861
+ DI+S G I+ E++TGK
Sbjct: 196 YTQTVDIWSVGCIMAEMITGKTL 218
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (267), Expect = 7e-26
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 15/208 (7%)
Query: 665 FENVIGGGGFRTAFKG----TMPDQKTVAVKKLSQAT----GQCDREFAAEMETLDMVKH 716
V+G G + F K A+K L +AT + E + L+ ++
Sbjct: 28 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ 87
Query: 717 Q-NLVQLLGYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLH 775
LV L + L+ +Y+ G L L R + ++ + L
Sbjct: 88 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH----EVQIYVGEIVLALE 143
Query: 776 HGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQ 835
H K II+ DIK NILL+ ++DFGL++ E+ + D TI Y+ + +
Sbjct: 144 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVR 203
Query: 836 AGRA--NERGDIYSFGVILLELVTGKQP 861
G + ++ D +S GV++ EL+TG P
Sbjct: 204 GGDSGHDKAVDWWSLGVLMYELLTGASP 231
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 107 bits (268), Expect = 9e-26
Identities = 40/215 (18%), Positives = 72/215 (33%), Gaps = 16/215 (7%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDRE---FAAEMETLDMVKHQNLVQLL 723
+G G F A+K L + ++ E L V LV+L
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 724 GYCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYII 783
+V EY+ G + LR A +LH +I
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 784 HMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERG 843
+ D+K N+L++ +V+DFG A+ + + + E + N+
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGT----PEALAPEIILSKGYNKAV 219
Query: 844 DIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWV 878
D ++ GV++ E+ G P F + + +
Sbjct: 220 DWWALGVLIYEMAAGYPP----FFADQPIQIYEKI 250
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (267), Expect = 1e-25
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 667 NVIGGGGFRTAFKGT-MPDQKTVAVKKLSQA--TGQCDREFAAEMETLDMVKHQNLVQLL 723
+ +G G + + VAVKKLS+ + + E+ L +KH+N++ LL
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 724 GYCSVGE-----EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF 778
+ + + +++ L++ ++ + L + Y RG+ ++H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH--- 138
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGR 838
IIH D+K SN+ +N+ E K+ DFGLAR + ++ A P
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 839 ANERGDIYSFGVILLELVTGKQP 861
N+ DI+S G I+ EL+TG+
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTL 218
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 105 bits (261), Expect = 3e-25
Identities = 70/311 (22%), Positives = 115/311 (36%), Gaps = 17/311 (5%)
Query: 26 QERRSLVHFKNSLQNPQVLSGWNKTTRHCH--WFGVKC----RHSRVVSLVIQTQSLKG- 78
Q++++L+ K L NP LS W TT C+ W GV C + RV +L + +L
Sbjct: 6 QDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKP 65
Query: 79 -PVSPFLFNLSSLRILDLSKNL-LFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLT 136
P+ L NL L L + L G + P ++ L +L L + +SG+IP L +
Sbjct: 66 YPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIK 125
Query: 137 RLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLL 196
L T+ N+ +G +P + + L + F GN ++G IP G ++L
Sbjct: 126 TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR-- 183
Query: 197 SGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITP 256
L + + E + +
Sbjct: 184 -----NRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG 238
Query: 257 EIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELV 316
++G L + L NN++ G +P+ L L +N+ N L G I
Sbjct: 239 KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSA 297
Query: 317 LVNNRISGSIP 327
NN+ P
Sbjct: 298 YANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 82.5 bits (202), Expect = 1e-17
Identities = 68/266 (25%), Positives = 108/266 (40%), Gaps = 19/266 (7%)
Query: 378 SNAVALEKLDLSSNMLTR--QIPKKIGNLTNIQILKLNSN-FFDGIIPMEFGDCISLNTL 434
+ + LDLS L + IP + NL + L + G IP L+ L
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 435 DLGSNNLNGCVVVVY--------LLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIP 486
+ N++G + L + N LSG +P S+S L NL + GN ++G+IP
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 487 PEFGDSLK-VQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNEL 545
+G K + + N+LTG IP + L+ + S G+ + L D + ++
Sbjct: 167 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKI 226
Query: 546 DGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNR 605
G LD N + G +P+ L L +L LN++ N
Sbjct: 227 HLAKNSLAFDLGKVGLSKNL-------NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279
Query: 606 LEGEVPRSGICQNLSIISLTGNKDLC 631
L GE+P+ G Q + + NK LC
Sbjct: 280 LCGEIPQGGNLQRFDVSAYANNKCLC 305
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 80.2 bits (196), Expect = 9e-17
Identities = 64/280 (22%), Positives = 103/280 (36%), Gaps = 24/280 (8%)
Query: 211 LSYLDVSNNLLSGN--IPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYIS 268
++ LD+S L IP + NL L+ LY+G VG I P I + L Y+
Sbjct: 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINN----LVGPIPPAIAKLTQLHYLY 107
Query: 269 LSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPE 328
+++ +SG IP L +LV ++ N LSGT+ NL + NRISG+IP+
Sbjct: 108 ITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD 167
Query: 329 YISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDL 388
+ + + + + F S + + + + +
Sbjct: 168 SYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIH 227
Query: 389 SSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVV 448
+ K+G N+ L L +N G +P L++L++ NNL
Sbjct: 228 LAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL------- 280
Query: 449 YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGN-LLTGSIPP 487
G+IP L N L GS P
Sbjct: 281 ---------CGEIP-QGGNLQRFDVSAYANNKCLCGSPLP 310
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 79.8 bits (195), Expect = 1e-16
Identities = 54/258 (20%), Positives = 91/258 (35%), Gaps = 12/258 (4%)
Query: 264 LKYISLSNNKLSG--PIPRELCNSGSLVEINLDGNM-LSGTIEDVFDRCTNLSELVL-VN 319
+ + LS L PIP L N L + + G L G I + T L L +
Sbjct: 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT 111
Query: 320 NRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISN 379
N L D YN +G +P S+ + NL+ N + G++ +
Sbjct: 112 NVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171
Query: 380 AVALEKLDLSSN-------MLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLN 432
L S T + +L+ +++ G ++ N
Sbjct: 172 FSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN 231
Query: 433 TLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDS 492
+L + + L L NN + G +P L++L L +LN+ N L G IP + G+
Sbjct: 232 SLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNL 290
Query: 493 LKVQGLYLGHNQLTGSIP 510
+ +N+ P
Sbjct: 291 QRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 76.7 bits (187), Expect = 1e-15
Identities = 61/289 (21%), Positives = 100/289 (34%), Gaps = 27/289 (9%)
Query: 308 RCTNLSELVLVNNRISG--SIPEYISELP-LKVFDLQYN-NFTGVIPVSLWNSENLMEFN 363
+ ++ L L + IP ++ LP L + N G IP ++ L
Sbjct: 48 QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLY 107
Query: 364 AASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPM 423
+ G++ +S L LD S N L+ +P I +L N+ + + N G IP
Sbjct: 108 ITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD 167
Query: 424 EFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTG 483
+G L T S N L + + L ++L G
Sbjct: 168 SYGSFSKLFTSMTISRNR---------LTGKIPPTFANLNLAFVDLSRNMLEGDASVLFG 218
Query: 484 SIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCN 543
S L L ++ S + L N++YG++P L L L++S
Sbjct: 219 SDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVS-- 276
Query: 544 ELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCS 592
N GEIP + GNL + + ++ N P C+
Sbjct: 277 -----------FNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSPLPACT 313
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 72.1 bits (175), Expect = 4e-14
Identities = 51/275 (18%), Positives = 91/275 (33%), Gaps = 8/275 (2%)
Query: 145 SNSFTGEMPSELGDIKQLKSLDFSGNGLNG--TIPSRLGDLTQLQDLDLSDNLLSGSLPV 202
+ ++ G + ++ +LD SG L IPS L +L L L + +L
Sbjct: 35 NRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGI---NNLVG 91
Query: 203 SLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCS 262
+ + L+ L ++ L + + G + P I +
Sbjct: 92 PIPPAIAKLTQLH--YLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLP 149
Query: 263 MLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRI 322
L I+ N++SG IP + L NL+ + L N +
Sbjct: 150 NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNML 209
Query: 323 SGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVA 382
G N + S+NL + +N + G+L ++
Sbjct: 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKF 269
Query: 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFF 417
L L++S N L +IP + GNL + +N
Sbjct: 270 LHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKC 303
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 60.9 bits (146), Expect = 2e-10
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 166 DFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNN-LLSGN 224
D N + GT+P L L L L++S N L G +P NLQ +NN L G+
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ--GGNLQRFDVSAYANNKCLCGS 307
Query: 225 IPP 227
P
Sbjct: 308 PLP 310
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 104 bits (261), Expect = 4e-25
Identities = 37/221 (16%), Positives = 87/221 (39%), Gaps = 18/221 (8%)
Query: 665 FENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQL 722
+G G + F+ + + + V VK L ++ E++ L+ ++ N++ L
Sbjct: 39 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITL 95
Query: 723 LGYCSVGEEKL--LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP 780
+ LV+E++ N + +L Y + + + H
Sbjct: 96 ADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH---SM 148
Query: 781 YIIHMDIKTSNILL-NDYFEAKVSDFGLARLISDCESHVSTDTADTIGY-VPSEYGQAGR 838
I+H D+K N+++ +++ + ++ D+GLA + + + + P
Sbjct: 149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY--NVRVASRYFKGPELLVDYQM 206
Query: 839 ANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNLVDWVL 879
+ D++S G +L ++ K+P ++ D + VL
Sbjct: 207 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 247
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (255), Expect = 4e-24
Identities = 54/203 (26%), Positives = 77/203 (37%), Gaps = 18/203 (8%)
Query: 668 VIGGGGFRTAFKGT-MPDQKTVAVKKLSQA--TGQCDREFAAEMETLDMVKHQNLVQLLG 724
IG G + VA+KKLS+ + E+ + V H+N++ LL
Sbjct: 24 PIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 83
Query: 725 YCSV------GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF 778
+ ++ LV E M D + + Y GI LH
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL----DHERMSYLLYQMLCGIKHLHS-- 137
Query: 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGR 838
IIH D+K SNI++ K+ DFGLAR + S + T T Y E
Sbjct: 138 -AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 839 ANERGDIYSFGVILLELVTGKQP 861
E DI+S G I+ E+V K
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKIL 217
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 97.8 bits (242), Expect = 3e-22
Identities = 76/414 (18%), Positives = 133/414 (32%), Gaps = 56/414 (13%)
Query: 135 LTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194
L L + T + D+ Q+ +L G+ +I + L L ++ S+N
Sbjct: 21 LAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNN 76
Query: 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRI 254
L+ P+ L L + + ++ L + + +L
Sbjct: 77 QLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR 136
Query: 255 TPEIGN-----CSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRC 309
N ++ SL + + LD + + V +
Sbjct: 137 LELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKL 196
Query: 310 TNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLL 369
TNL L+ NN+IS P I L L N +L + NL + + A+N +
Sbjct: 197 TNLESLIATNNQISDITPLGILT-NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQI 253
Query: 370 EGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCI 429
+S L +L L +N ++ P + LT + L+LN N + +
Sbjct: 254 SNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLE--DISPISNLK 307
Query: 430 SLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEF 489
+L L L NN++ +S LT L L N ++
Sbjct: 308 NLTYLTLYFNNISD------------------ISPVSSLTKLQRLFFANNKVSD--VSSL 347
Query: 490 GDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCN 543
+ + L GHNQ++ P NL +T L L+
Sbjct: 348 ANLTNINWLSAGHNQISDLTP------------------LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 91.2 bits (225), Expect = 4e-20
Identities = 68/433 (15%), Positives = 129/433 (29%), Gaps = 79/433 (18%)
Query: 182 DLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLG 241
L + L ++ ++ + L + +L +K +
Sbjct: 20 ALAEKMKTVLGKTNVTDTVSQTDLDQVTTL---QADRL-----------GIKSID----- 60
Query: 242 IGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGT 301
+ + L I+ SNN+L+ P L N LV+I ++ N ++
Sbjct: 61 ---------------GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI 103
Query: 302 IEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLME 361
L + + L++ ++ + + ++ +
Sbjct: 104 TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN 163
Query: 362 FNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGII 421
L + E + + + LTN++ L +N I
Sbjct: 164 QVTDLKPLANLTTLERLD----------ISSNKVSDISVLAKLTNLESLIATNNQISDIT 213
Query: 422 PMEFGDCISLNTLDLGSNNLNG------CVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLN 475
P+ +L+ L L N L + L L NN +S P LS LT LT L
Sbjct: 214 PLGI--LTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 269
Query: 476 LFGNLLTGSIP----PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGN 531
L N ++ P + + + ++ + L N + P +
Sbjct: 270 LGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSS 327
Query: 532 LNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLC 591
L L L + N++ L NL + +L N + P L
Sbjct: 328 LTKLQRLFFANNKVSD---------------VSSLANLTNINWLSAGHNQISDLTP--LA 370
Query: 592 SLPYLLYLNLADN 604
+L + L L D
Sbjct: 371 NLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 85.4 bits (210), Expect = 3e-18
Identities = 66/374 (17%), Positives = 130/374 (34%), Gaps = 34/374 (9%)
Query: 269 LSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPE 328
L ++ + + + + + D + +I+ + NL+++ NN+++ P
Sbjct: 29 LGKTNVTDTVSQTDLDQ--VTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP- 83
Query: 329 YISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDL 388
+ L K+ D+ NN L N NL +N + + + +L
Sbjct: 84 -LKNLT-KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSS 141
Query: 389 SSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVV 448
++ + ++ + IS N + S +
Sbjct: 142 NTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK-LTNLE 200
Query: 449 YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGS 508
L+ NN +S P + TNL L+L GN L + L L +NQ++
Sbjct: 201 SLIATNNQISDITPLGIL--TNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNL 256
Query: 509 IPESLG------YLSGNKLYGSVPTSFGNLNGLTHLDLSCN---------ELDGIVGLYV 553
P S L N++ P L LT+L+L+ N L + L +
Sbjct: 257 APLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTL 314
Query: 554 QSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRS 613
N P + +L +L+ L F+ N + L +L + +L+ N++ P +
Sbjct: 315 YFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTPLA 370
Query: 614 GICQNLSIISLTGN 627
++ + L
Sbjct: 371 N-LTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 85.1 bits (209), Expect = 4e-18
Identities = 83/417 (19%), Positives = 147/417 (35%), Gaps = 56/417 (13%)
Query: 64 SRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQ 123
+ + V+ ++ VS +L + L + + + V L L ++ NQ
Sbjct: 22 AEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI-KSIDG-VEYLNNLTQINFSNNQ 77
Query: 124 LSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDL 183
L+ P L LT+L I + +N P +L + + +
Sbjct: 78 LTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 135
Query: 184 TQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIG 243
+ + +S L +L + ++ +LK L++L
Sbjct: 136 RLELSSN----------------TISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLER 179
Query: 244 PYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIE 303
S V + + L+ + +NN++S P + +L E++L+GN L
Sbjct: 180 LDISSNKV-SDISVLAKLTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLKDI-- 234
Query: 304 DVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEF 362
TNL++L L NN+IS P +S L L L N + + P++ + +E
Sbjct: 235 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLEL 292
Query: 363 NAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIP 422
N ISN L L L N ++ P + +LT +Q L +N
Sbjct: 293 NENQL----EDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--V 344
Query: 423 MEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGN 479
+ ++N L G N +S P L+ LT +T L L
Sbjct: 345 SSLANLTNINWLSAGHNQ----------------ISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 85.1 bits (209), Expect = 4e-18
Identities = 74/383 (19%), Positives = 136/383 (35%), Gaps = 48/383 (12%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
L+ L K + +S ++L ++ L + SI + L L I+ +
Sbjct: 20 ALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSN 75
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205
N T P L ++ +L + + N + P L + L
Sbjct: 76 NQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN 133
Query: 206 K--------NLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPE 257
+ +S L +L + ++ +LK L++L S V
Sbjct: 134 LNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKV-SDISV 192
Query: 258 IGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVL 317
+ + L+ + +NN++S P + + L E++L+GN L TNL++L L
Sbjct: 193 LAKLTNLESLIATNNQISDITPLGILTN--LDELSLNGNQLKDI--GTLASLTNLTDLDL 248
Query: 318 VNNRISGSIPEYISELP-LKVFDLQYNNFTGVIPVS--------------------LWNS 356
NN+IS P +S L L L N + + P++ + N
Sbjct: 249 ANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL 306
Query: 357 ENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNF 416
+NL N + +S+ L++L ++N ++ + NLTNI L N
Sbjct: 307 KNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVS--DVSSLANLTNINWLSAGHNQ 362
Query: 417 FDGIIPMEFGDCISLNTLDLGSN 439
+ P + + L L
Sbjct: 363 ISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 73.9 bits (180), Expect = 2e-14
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 31/179 (17%)
Query: 61 CRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVG 120
+ + L + LK L +L++L LDL+ N + +S L +L L +G
Sbjct: 216 GILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLG 271
Query: 121 ENQLSGSIP--------------------SQLGLLTRLETISLRSNSFTGEMPSELGDIK 160
NQ+S P S + L L ++L N+ + P + +
Sbjct: 272 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLT 329
Query: 161 QLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNN 219
+L+ L F+ N + + S L +LT + L N +S P L NL ++ L +++
Sbjct: 330 KLQRLFFANNKV--SDVSSLANLTNINWLSAGHNQISDLTP---LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 48.5 bits (114), Expect = 2e-06
Identities = 51/317 (16%), Positives = 82/317 (25%), Gaps = 93/317 (29%)
Query: 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLG----- 437
+ L + + L N+ + ++N I P + L + +
Sbjct: 46 VTTLQADRLGIKS--IDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA 101
Query: 438 ---------------------------------------SNNLNGCVVVVYLLLNNNMLS 458
SN ++ + L +
Sbjct: 102 DITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSF 161
Query: 459 GKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQG-LYLGHNQLTGSIPESLG--- 514
G L L NLTTL L L +NQ++ P +
Sbjct: 162 GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNL 221
Query: 515 ---YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQ 571
L+GN+L + +L LT LDL+ N++ + L L +
Sbjct: 222 DELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNL---------------APLSGLTK 264
Query: 572 LEYLDFSMNMLDGHIPEKLCS--------------------LPYLLYLNLADNRLEGEVP 611
L L N + P + L L YL L N + P
Sbjct: 265 LTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP 324
Query: 612 RSGICQNLSIISLTGNK 628
S L + NK
Sbjct: 325 VSS-LTKLQRLFFANNK 340
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 92.8 bits (229), Expect = 9e-21
Identities = 44/250 (17%), Positives = 81/250 (32%), Gaps = 22/250 (8%)
Query: 652 IVVGSVLVIAIIVFENVIGGGGFRTAFKGT-MPDQKTVAVKKLSQATGQCDREFAAEMET 710
G A + +G G F T + M + VA+K + + E++
Sbjct: 4 AFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEA-AEDEIKL 62
Query: 711 LDMVKHQNLVQLLGYCSVGEEKLLVY---------------EYMVNGSLDDWLRNRAASL 755
L V + + + KLL + E + L + +
Sbjct: 63 LQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGI 122
Query: 756 DWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN-DYFEAKVSDFGLARLISDC 814
+I+ G+ ++H + IIH DIK N+L+ + +A L + C
Sbjct: 123 PLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC 180
Query: 815 ESHVSTDTADTI-GYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGN 873
+ Y E DI+S ++ EL+TG P+ E
Sbjct: 181 WYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD-EGHSYTK 239
Query: 874 LVDWVLLMMK 883
D + +++
Sbjct: 240 DDDHIAQIIE 249
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.8 bits (213), Expect = 3e-19
Identities = 53/283 (18%), Positives = 91/283 (32%), Gaps = 13/283 (4%)
Query: 163 KSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222
+ GL +P + Q + L N +S +P + + ++L+ L + +N
Sbjct: 14 VTTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISH-VPAASFRACRNLTILWLHSN--- 66
Query: 223 GNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPREL 282
+ L + + L + L L P
Sbjct: 67 -VLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLF 125
Query: 283 CNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQ 341
+L + L N L +D F NL+ L L NRIS L L L
Sbjct: 126 RGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLH 185
Query: 342 YNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKI 401
N V P + + LM +N L + ++ AL+ L L+ N +
Sbjct: 186 QNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPW-VCDCRAR 244
Query: 402 GNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGC 444
+Q + +S+ +P + L +N+L GC
Sbjct: 245 PLWAWLQKFRGSSSEVPCSLPQRLAG---RDLKRLAANDLQGC 284
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.9 bits (190), Expect = 3e-16
Identities = 53/283 (18%), Positives = 90/283 (31%), Gaps = 17/283 (6%)
Query: 140 TISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGS 199
T S +P + + + GN ++ + L L L N+L+
Sbjct: 15 TTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARI 71
Query: 200 LPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIG 259
+ N L P L +L L+L Q
Sbjct: 72 DAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQEL-----GPGLFR 126
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319
+ L+Y+ L +N L + G+L + L GN +S E F +L L+L
Sbjct: 127 GLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQ 186
Query: 320 NRISGSIPEYISELPLK-VFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGS--LSWE 376
NR++ P +L L NN + + +L L N
Sbjct: 187 NRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPL 246
Query: 377 ISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDG 419
+ L+K SS+ + +P+ L + +L +N G
Sbjct: 247 WAW---LQKFRGSSSEVPCSLPQ---RLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.2 bits (175), Expect = 3e-14
Identities = 49/320 (15%), Positives = 80/320 (25%), Gaps = 53/320 (16%)
Query: 189 LDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLS 248
L ++PV + Q + + N +S + L+ L+L
Sbjct: 16 TSCPQQGLQ-AVPVGIPAASQ---RIFLHGNRISHVPAASFRACRNLTILWLHSNVLARI 71
Query: 249 LFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDR 308
+ L N +L P G L ++LD L +F
Sbjct: 72 DAAAFTGLALLEQLDLSD----NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRG 127
Query: 309 CTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNL 368
L + LQ N + + + NL N
Sbjct: 128 LAAL-----------------------QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR 164
Query: 369 LEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDC 428
+ +L++L L N + P +L + L L +N +
Sbjct: 165 ISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPL 224
Query: 429 ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE 488
+L L L N L L + + S+P
Sbjct: 225 RALQYLRLNDNPWVCDCRARPL-----------------WAWLQKFRGSSSEVPCSLPQR 267
Query: 489 F-GDSLKVQGLYLGHNQLTG 507
G L L N L G
Sbjct: 268 LAGRDL----KRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.8 bits (174), Expect = 4e-14
Identities = 57/282 (20%), Positives = 87/282 (30%), Gaps = 23/282 (8%)
Query: 283 CNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQ 341
C + V + L + + L NRIS L + L
Sbjct: 8 CYNEPKVTTSCPQQGLQAVPVGIP---AASQRIFLHGNRISHVPAASFRACRNLTILWLH 64
Query: 342 YNNFTGVIPVSLWNSENLMEFNAASNLLEGSL-SWEISNAVALEKLDLSSNMLTRQIPKK 400
N + + L + + + N S+ L L L L P
Sbjct: 65 SNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGL 124
Query: 401 IGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN--------GCVVVVYLLL 452
L +Q L L N + F D +L L L N ++ G + LLL
Sbjct: 125 FRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184
Query: 453 NNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPES 512
+ N ++ P + L L TL LF N L+ +Q L L N
Sbjct: 185 HQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR 244
Query: 513 LGY-------LSGNKLYGSVPTSFGNLNGLTHLDLSCNELDG 547
+ S +++ S+P L G L+ N+L G
Sbjct: 245 PLWAWLQKFRGSSSEVPCSLP---QRLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.9 bits (164), Expect = 7e-13
Identities = 59/293 (20%), Positives = 90/293 (30%), Gaps = 39/293 (13%)
Query: 308 RCTNLSEL-VLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAAS 366
C N ++ + ++P I + L N + V S NL S
Sbjct: 7 VCYNEPKVTTSCPQQGLQAVPVGIPAA-SQRIFLHGNRISHVPAASFRACRNLTILWLHS 65
Query: 367 NLLEGSLSWEISNAVALEKLDLSSNMLTRQI-PKKIGNLTNIQILKLNSNFFDGIIPMEF 425
N+L + + LE+LDLS N R + P L + L L+ + P F
Sbjct: 66 NVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLF 125
Query: 426 GDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSI 485
+L L L N L + L NLT L L GN ++
Sbjct: 126 RGLAALQYLYLQDNALQAL----------------PDDTFRDLGNLTHLFLHGNRISSVP 169
Query: 486 PPEFGDSLKVQGLYLGHNQLTGSIPESLGYL--------SGNKLYGSVPTSFGNLNGLTH 537
F + L L N++ P + L N L + L L +
Sbjct: 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQY 229
Query: 538 LDLSCNELDG----------IVGLYVQSNKFYGEIPPELGN--LVQLEYLDFS 578
L L+ N + S++ +P L L +L D
Sbjct: 230 LRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQ 282
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.1 bits (162), Expect = 1e-12
Identities = 53/261 (20%), Positives = 91/261 (34%), Gaps = 10/261 (3%)
Query: 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNS 147
++ + + L N + + + L +L + N L+ + L LE + L N+
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 148 FTGE-MPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLK 206
P+ + +L +L GL P L LQ L L DN L LP +
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFR 150
Query: 207 NLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKY 266
+L +L++L + N +S L L L L + L
Sbjct: 151 DLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA-----HVHPHAFRDLGRLMT 205
Query: 267 ISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSI 326
+ L N LS L +L + L+ N L + ++ + S+
Sbjct: 206 LYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC-RARPLWAWLQKFRGSSSEVPCSL 264
Query: 327 PEYISELPLKVFDLQYNNFTG 347
P+ ++ LK L N+ G
Sbjct: 265 PQRLAGRDLK--RLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.8 bits (156), Expect = 8e-12
Identities = 57/264 (21%), Positives = 81/264 (30%), Gaps = 33/264 (12%)
Query: 386 LDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCV 445
L +P I Q + L+ N + F C +L L L SN L
Sbjct: 16 TSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARID 72
Query: 446 VVVYLLLNNNM---------LSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQ 496
+ L L P + L L TL+L L P F +Q
Sbjct: 73 AAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQ 132
Query: 497 GLYLGHNQLTGSIPESLGY--------LSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGI 548
LYL N L ++ L GN++ +F L+ L L L N + +
Sbjct: 133 YLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192
Query: 549 VGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEG 608
P +L +L L N L E L L L YL L DN
Sbjct: 193 -------------HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239
Query: 609 EVPRSGICQNLSIISLTGNKDLCE 632
+ + L + ++ C
Sbjct: 240 DCRARPLWAWLQKFRGSSSEVPCS 263
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 84.3 bits (207), Expect = 3e-18
Identities = 54/314 (17%), Positives = 99/314 (31%), Gaps = 49/314 (15%)
Query: 308 RCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASN 367
RC +V ++ +P+ + + DLQ N T + N +NL
Sbjct: 7 RCQCHLRVVQCSDLGLEKVPKDLPPD-TALLDLQNNKITEIKDGDFKNLKNL-------- 57
Query: 368 LLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGD 427
L L +N +++ P L ++ L L+ N +
Sbjct: 58 ----------------HTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKT 101
Query: 428 CISLNTLDLGSNNLN-------GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNL 480
L + + ++VV L N SG G+ + L+ + +
Sbjct: 102 LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN 161
Query: 481 LTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSG-NKLYGSVPTSFGNLNGLTHLD 539
+T +IP SL L+L N++T SL L+ KL S + NG
Sbjct: 162 IT-TIPQGLPPSLTE--LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 218
Query: 540 LSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDG------HIPEKLCSL 593
E +N ++P L + ++ + N + P
Sbjct: 219 PHLRE-------LHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKK 271
Query: 594 PYLLYLNLADNRLE 607
++L N ++
Sbjct: 272 ASYSGVSLFSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 82.0 bits (201), Expect = 2e-17
Identities = 45/265 (16%), Positives = 89/265 (33%), Gaps = 39/265 (14%)
Query: 88 SSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNS 147
+LDL N + NLK L L + N++S P L +LE + L N
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 148 FTGEMPSELGDIKQLKSLDFSGNGLN-----------------------GTIPSRLGDLT 184
+++L+ + + G +
Sbjct: 91 LKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 150
Query: 185 QLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGP 244
+L + ++D ++ ++P L +L L + N ++ + L L+ L
Sbjct: 151 KLSYIRIADTNIT-TIPQGLPPSLT---ELHLDGNKITKVDAASLKGLNNLAKLG----- 201
Query: 245 YQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIED 304
+ + N L+ + L+NNKL +P L + + + L N +S +
Sbjct: 202 LSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSN 260
Query: 305 VF------DRCTNLSELVLVNNRIS 323
F + + S + L +N +
Sbjct: 261 DFCPPGYNTKKASYSGVSLFSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 82.0 bits (201), Expect = 2e-17
Identities = 46/290 (15%), Positives = 86/290 (29%), Gaps = 30/290 (10%)
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323
+ L NNK++ + N +L + L N +S F L L L N++
Sbjct: 33 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 92
Query: 324 GSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVAL 383
+ L + N ++E G + L
Sbjct: 93 ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKL 152
Query: 384 EKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNG 443
+ ++ +T IP+ G ++ L L+ N + +L L L N+++
Sbjct: 153 SYIRIADTNIT-TIPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 209
Query: 444 CVVVVYL-------LLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTG------SIPPEFG 490
L NN K+PG L+ + + L N ++ P
Sbjct: 210 VDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNT 269
Query: 491 DSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDL 540
G+ L N + + P++F + + L
Sbjct: 270 KKASYSGVSLFSNPVQ--------------YWEIQPSTFRCVYVRAAVQL 305
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 80.9 bits (198), Expect = 4e-17
Identities = 49/281 (17%), Positives = 88/281 (31%), Gaps = 28/281 (9%)
Query: 114 LKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLN 173
+L + N+++ L L T+ L +N + P + +L+ L S N L
Sbjct: 33 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 92
Query: 174 GTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLK 233
L +L+ + + S+ L N + L + SG +K
Sbjct: 93 ELPEKMPKTLQELRVHENEITKVRKSVFNGL--NQMIVVELGTNPLKSSGIENGAFQGMK 150
Query: 234 KLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINL 293
KLS + + T G L + L NK++ L +L ++ L
Sbjct: 151 KLSYIRIA--------DTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGL 202
Query: 294 DGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSL 353
N +S +L EL L NN++ ++V L NN + +
Sbjct: 203 SFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDF 262
Query: 354 WNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLT 394
+ + + L SN +
Sbjct: 263 ------------------CPPGYNTKKASYSGVSLFSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 43.5 bits (101), Expect = 6e-05
Identities = 16/58 (27%), Positives = 23/58 (39%)
Query: 551 LYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEG 608
L +Q+NK + NL L L N + P L L L L+ N+L+
Sbjct: 36 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE 93
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 76.7 bits (188), Expect = 1e-16
Identities = 21/160 (13%), Positives = 44/160 (27%), Gaps = 26/160 (16%)
Query: 667 NVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT----------GQCDREFAAEMETLDMVKH 716
++G G F VK D F+ +
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 717 QNLVQLLGYCSVG----EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGIS 772
+ L +L G E ++ E + L ++ ++
Sbjct: 66 RALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRV--------RVENPDEVLDMILEEVA 117
Query: 773 FLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812
+H I+H D+ N+L+++ + DF + +
Sbjct: 118 KFYH---RGIVHGDLSQYNVLVSEE-GIWIIDFPQSVEVG 153
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.2 bits (152), Expect = 2e-11
Identities = 41/276 (14%), Positives = 87/276 (31%), Gaps = 11/276 (3%)
Query: 140 TISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGS 199
T+ L + ++ L + + + + ++ + ++Q +DLS++++ S
Sbjct: 4 TLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFS-PFRVQHMDLSNSVIEVS 61
Query: 200 LPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIG 259
+L L L + LS I + L L L + +
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319
L + S ++ ++NL G + D+ LV ++
Sbjct: 122 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 181
Query: 320 NRISGSIPEYISELPLKVFDLQY------NNFTGVIPVSLWNSENLMEFNAASNLLEGSL 373
S + + ++ LQ+ + + L L + +G+L
Sbjct: 182 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTL 241
Query: 374 SWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQI 409
AL L ++ + T IGN N +I
Sbjct: 242 QLLKE---ALPHLQINCSHFTTIARPTIGNKKNQEI 274
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.8 bits (151), Expect = 3e-11
Identities = 39/263 (14%), Positives = 92/263 (34%), Gaps = 14/263 (5%)
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSG-TIEDVFDRCTNLSELVLVNNRI 322
+ + + P+ E + + ++L +++ T+ + +C+ L L L R+
Sbjct: 25 VIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRL 83
Query: 323 SGSIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAV 381
S I +++ L +L + ++ S L E +LSW
Sbjct: 84 SDPIVNTLAKNSNLVRLNLSGCSG-------FSEFALQTLLSSCSRLDELNLSWCFDFTE 136
Query: 382 ALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL 441
++ ++ T G N+Q L++ + S+ +
Sbjct: 137 KHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF 196
Query: 442 NGCVVVVYLLLNN-NMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYL 500
+ +L L+ + + L + L TL +FG + G++ ++L L +
Sbjct: 197 FQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTL-QLLKEAL--PHLQI 253
Query: 501 GHNQLTGSIPESLGYLSGNKLYG 523
+ T ++G +++G
Sbjct: 254 NCSHFTTIARPTIGNKKNQEIWG 276
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.1 bits (118), Expect = 4e-07
Identities = 45/261 (17%), Positives = 83/261 (31%), Gaps = 18/261 (6%)
Query: 339 DLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLT-RQI 397
DL N + L S+ ++ F + ++ L E + ++ +DLS++++ +
Sbjct: 6 DLTGKNLHPDVTGRL-LSQGVIAFRCPRSFMDQPL-AEHFSPFRVQHMDLSNSVIEVSTL 63
Query: 398 PKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSN-NLNGCVVVVYLLLNNNM 456
+ + +Q L L I +L L+L + + L + +
Sbjct: 64 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123
Query: 457 LSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYL 516
+ + + T + G +Q L L
Sbjct: 124 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLS 183
Query: 517 SGNKLYGSVPTSFGNLNGLTHLDLS-CNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYL 575
L F LN L HL LS C ++ E ELG + L+ L
Sbjct: 184 DSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIP-------------ETLLELGEIPTLKTL 230
Query: 576 DFSMNMLDGHIPEKLCSLPYL 596
+ DG + +LP+L
Sbjct: 231 QVFGIVPDGTLQLLKEALPHL 251
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.2 bits (95), Expect = 4e-04
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 9/93 (9%)
Query: 433 TLDLGSNNLNGCVV-------VVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSI 485
TLDL NL+ V V+ + + + S + ++L +++ S
Sbjct: 4 TLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFS-PFRVQHMDLSNSVIEVST 62
Query: 486 PPEFGDSLK-VQGLYLGHNQLTGSIPESLGYLS 517
+Q L L +L+ I +L S
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNS 95
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.9 bits (94), Expect = 4e-04
Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 11/118 (9%)
Query: 536 THLDLSCNELDG-----IVGLYVQ----SNKFYGEIPPELGNLVQLEYLDFSMNML-DGH 585
LDL+ L ++ V F + E + +++++D S +++
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVST 62
Query: 586 IPEKLCSLPYLLYLNLADNRLEGEVPRS-GICQNLSIISLTGNKDLCEKIMGSDCQIL 642
+ L L L+L RL + + NL ++L+G E + +
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC 120
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.1 bits (144), Expect = 2e-10
Identities = 52/282 (18%), Positives = 81/282 (28%), Gaps = 40/282 (14%)
Query: 376 EISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLD 435
E+S + +++ LT +P + + IL L+ N L L+
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 436 LGSNNLNGCVVVVYL-----LLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFG 490
L L V L L ++ +P L LT L++ N LT
Sbjct: 62 LDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALR 121
Query: 491 DSLKVQGLYLGHNQLTGSIPES--------LGYLSGNKLYGSVPTSFGNLNGLTHLDLSC 542
++Q LYL N+L P L+ N L L L L L
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQE 181
Query: 543 NELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYL--N 600
N IP L + N + C + Y +
Sbjct: 182 NS--------------LYTIPKGFFGSHLLPFAFLHGNPWLCN-----CEILYFRRWLQD 222
Query: 601 LADNRLEGEVPRSGICQNLSIISLT---GNKDLCEKIMGSDC 639
A+N + ++ S+ +K K G C
Sbjct: 223 NAENVYVWKQGVDVKAMTSNVASVQCDNSDKFPVYKYPGKGC 264
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.3 bits (142), Expect = 4e-10
Identities = 39/212 (18%), Positives = 68/212 (32%), Gaps = 14/212 (6%)
Query: 135 LTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194
+ ++ + T +P +L K L S N L + L T+L L+L
Sbjct: 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRI 254
L+ L L +L L L + +
Sbjct: 66 ELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLP---------ALTVLDVSFNRLTSLP 116
Query: 255 TPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSE 314
+ L+ + L N+L P L + L +++L N L+ + + NL
Sbjct: 117 LGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDT 176
Query: 315 LVLVNNRISGSIPEYISELP-LKVFDLQYNNF 345
L+L N + +IP+ L L N +
Sbjct: 177 LLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (139), Expect = 9e-10
Identities = 37/206 (17%), Positives = 71/206 (34%), Gaps = 11/206 (5%)
Query: 308 RCTNLSELVLVN---NRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNA 364
+ ++ + VN ++ ++P + + + L N +L L + N
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLPKD-TTILHLSENLLYTFSLATLMPYTRLTQLNL 62
Query: 365 ASNLLE-----GSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDG 419
L G+L + ++ +L + + +++ ++ L G
Sbjct: 63 DRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRG 122
Query: 420 IIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGN 479
+ ++ L L + L L NN L+ G L+ L NL TL L N
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182
Query: 480 LLTGSIPPEFGDSLKVQGLYLGHNQL 505
L +IP F S + +L N
Sbjct: 183 SLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.1 bits (131), Expect = 9e-09
Identities = 44/179 (24%), Positives = 62/179 (34%), Gaps = 3/179 (1%)
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRIS 323
+ LS N L L L ++NLD T V L L L +N++
Sbjct: 33 TTILHLSENLLYTFSLATLMPYTRLTQLNLDRAE--LTKLQVDGTLPVLGTLDLSHNQLQ 90
Query: 324 GSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVAL 383
+ L V D+ +N T + +L L E N L+ ++ L
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 384 EKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN 442
EKL L++N LT + L N+ L L N IP F L L N
Sbjct: 151 EKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.1 bits (131), Expect = 9e-09
Identities = 46/214 (21%), Positives = 71/214 (33%), Gaps = 14/214 (6%)
Query: 155 ELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYL 214
E+ + ++ L +P L L LS+NLL ++ L L+ L
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYT-FSLATLMPYTRLTQL 60
Query: 215 DVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKL 274
++ G L L L L Q + L + +S N+L
Sbjct: 61 NLDRA--ELTKLQVDGTLPVLGTLDLSHNQLQ------SLPLLGQTLPALTVLDVSFNRL 112
Query: 275 SGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP 334
+ L G L E+ L GN L + L +L L NN ++ ++ L
Sbjct: 113 TSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLE 172
Query: 335 -LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASN 367
L LQ N+ IP + S L N
Sbjct: 173 NLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.6 bits (127), Expect = 3e-08
Identities = 52/226 (23%), Positives = 71/226 (31%), Gaps = 19/226 (8%)
Query: 424 EFGDCISLNTLDLGSNNL-----NGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFG 478
E S ++ NL + L L+ N+L +L T LT LNL
Sbjct: 5 EVSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDR 64
Query: 479 NLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHL 538
LT L L Q + ++L + SF L L
Sbjct: 65 AELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPA------LTVLDVSFNRLTSLPLG 118
Query: 539 DLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLY 598
L + Y++ N+ P L +LE L + N L L L L
Sbjct: 119 ALRGLGELQEL--YLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDT 176
Query: 599 LNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMGSDCQILTF 644
L L +N L L L GN LC +C+IL F
Sbjct: 177 LLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC------NCEILYF 216
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.9 bits (94), Expect = 4e-04
Identities = 37/211 (17%), Positives = 55/211 (26%), Gaps = 13/211 (6%)
Query: 86 NLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRS 145
++S ++ K L L P + K +L + EN L + L TRL ++L
Sbjct: 8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDR 64
Query: 146 NSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLL 205
T L L N L T L + +
Sbjct: 65 AELTKLQV-----DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLK 265
+PP + + L G + L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAG----LLNGLENLD 175
Query: 266 YISLSNNKLSGPIPRELCNSGSLVEINLDGN 296
+ L N L IP+ S L L GN
Sbjct: 176 TLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 57.9 bits (138), Expect = 2e-09
Identities = 57/342 (16%), Positives = 106/342 (30%), Gaps = 39/342 (11%)
Query: 184 TQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLK--KLSDLYLG 241
Q +L+L++ LS SLP L +L+SL S N L+ +P +LK + + L
Sbjct: 38 RQAHELELNNLGLS-SLP-ELPPHLESL---VASCNSLT-ELPELPQSLKSLLVDNNNLK 91
Query: 242 IGPYQLSLFVGRITPEIGNCSMLKYISLSNNKL----SGPIPRELCNSGSLVEINLDGNM 297
L + + + S K+ + + + SL I N
Sbjct: 92 ALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQ 151
Query: 298 LSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSE 357
L E + + +P + + L+ +P
Sbjct: 152 LEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYA 211
Query: 358 NLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQIL-KLNSNF 416
+ +L + + + + +L ++ + + I + + N
Sbjct: 212 DNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNA 271
Query: 417 FDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNL 476
I SL L++ +N L ++P L L
Sbjct: 272 SSNEIRSLCDLPPSLEELNVSNNKLI-----------------ELPALPP---RLERLIA 311
Query: 477 FGNLLTGSIPPEFGDSLKVQGLYLGHNQLTG--SIPESLGYL 516
N L +P +LK L++ +N L IPES+ L
Sbjct: 312 SFNHLA-EVPELPQ-NLKQ--LHVEYNPLREFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 53.3 bits (126), Expect = 5e-08
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 10/93 (10%)
Query: 143 LRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPV 202
N+ + E+ S L+ L+ S N L +P+ +L+ L S N L+
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPA---LPPRLERLIASFNHLA----- 317
Query: 203 SLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKL 235
+ + Q+L L V N L P +++ L
Sbjct: 318 EVPELPQNLKQLHVEYNPLRE-FPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.1 bits (115), Expect = 1e-06
Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 12/89 (13%)
Query: 452 LNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPE 511
N S +I +L LN+ N L +P +++ L N L +PE
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPP---RLERLIASFNHLA-EVPE 321
Query: 512 SLG-----YLSGNKLYG--SVPTSFGNLN 533
++ N L +P S +L
Sbjct: 322 LPQNLKQLHVEYNPLREFPDIPESVEDLR 350
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 46.4 bits (108), Expect = 9e-06
Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 9/131 (6%)
Query: 33 HFKNSLQNPQVLSGWNKTTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRI 92
+ T + S + + + + SL
Sbjct: 229 LNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEE 288
Query: 93 LDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEM 152
L++S N +L + RL+ L N L+ +P L L+ + + N E
Sbjct: 289 LNVSNN----KLIELPALPPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLR-EF 339
Query: 153 PSELGDIKQLK 163
P ++ L+
Sbjct: 340 PDIPESVEDLR 350
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 43.7 bits (101), Expect = 6e-05
Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 35/123 (28%)
Query: 292 NLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPV 351
N S I + D +L EL + NN++ +P L+ +N+ +P
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPR--LERLIASFNHLAE-VPE 321
Query: 352 SLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILK 411
N L++L + N L + P ++ + L+
Sbjct: 322 LPQN---------------------------LKQLHVEYNPLR-EFPDIPESVED---LR 350
Query: 412 LNS 414
+NS
Sbjct: 351 MNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 43.3 bits (100), Expect = 9e-05
Identities = 50/334 (14%), Positives = 95/334 (28%), Gaps = 32/334 (9%)
Query: 283 CNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQY 342
C E+ L+ LS ++ ++ +L LV N ++ +PE L K +
Sbjct: 35 CLDRQAHELELNNLGLS-SLPELP---PHLESLVASCNSLT-ELPELPQSL--KSLLVDN 87
Query: 343 NNFTGVIPV---------SLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNML 393
NN + + S E L E +S L + + L
Sbjct: 88 NNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAA 147
Query: 394 TRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLN 453
+++ L N+ L + + + + + + + L
Sbjct: 148 GNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLT 207
Query: 454 NNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESL 513
+ +L L + +P + + L+ P
Sbjct: 208 TIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPN-- 265
Query: 514 GYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVG-------LYVQSNKFYGEIPPEL 566
N + + L L++S N+L + L N E+P
Sbjct: 266 -LYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPRLERLIASFNHL-AEVPELP 323
Query: 567 GNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLN 600
N L+ L N L P+ S+ L +N
Sbjct: 324 QN---LKQLHVEYNPLRE-FPDIPESVED-LRMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 42.5 bits (98), Expect = 2e-04
Identities = 23/122 (18%), Positives = 35/122 (28%), Gaps = 39/122 (31%)
Query: 167 FSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIP 226
+ N + I S L++L++S+N L L L L S N L+ +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI-----ELPALPPRLERLIASFNHLA-EVP 320
Query: 227 PEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSG 286
NLK+L + N L P +
Sbjct: 321 ELPQNLKQLH--------------------------------VEYNPLRE-FPDIPESVE 347
Query: 287 SL 288
L
Sbjct: 348 DL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.7 bits (96), Expect = 3e-04
Identities = 46/347 (13%), Positives = 88/347 (25%), Gaps = 42/347 (12%)
Query: 134 LLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSD 193
L + + L + + +P L+SL S N L +P L L + +
Sbjct: 36 LDRQAHELELNNLGLS-SLPELPP---HLESLVASCNSLT-ELPELPQSLKSLLVDNNNL 90
Query: 194 NLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGR 253
LS P+ + + + S + + L L +
Sbjct: 91 KALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNN 150
Query: 254 ITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLS 313
E+ L +++ + ++ L+
Sbjct: 151 QLEELPELQNLPFLTAIYADNNSLKKLPDLPL---SLESIVAGNNILEELPELQNLPFLT 207
Query: 314 ELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIP---------VSLWNSENLMEFNA 364
+ NN + S L V D + + L
Sbjct: 208 TIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLY 267
Query: 365 ASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPME 424
N + +LE+L++S+N L +P L L + N +P
Sbjct: 268 YLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPALPPRLER---LIASFNHLAE-VPEL 322
Query: 425 FGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNL 471
+L L + N L + P + +L
Sbjct: 323 PQ---NLKQLHVEYNPLR-----------------EFPDIPESVEDL 349
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 52.0 bits (124), Expect = 1e-08
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 15/132 (11%)
Query: 189 LDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLS 248
L L+ L+ + L+ L +++LD+S+N L PP + L+ L L +
Sbjct: 3 LHLAHKDLTV---LCHLEQLLLVTHLDLSHNRLRAL-PPALAALRCLEVLQASDNALE-- 56
Query: 249 LFVGRITPEIGNCSMLKYISLSNNKL-SGPIPRELCNSGSLVEINLDGNMLS---GTIED 304
+ N L+ + L NN+L + L + LV +NL GN L G E
Sbjct: 57 -----NVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQER 111
Query: 305 VFDRCTNLSELV 316
+ + ++S ++
Sbjct: 112 LAEMLPSVSSIL 123
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.6 bits (123), Expect = 1e-08
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 8/127 (6%)
Query: 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTG 150
R+L L+ L + + L + L + N+L P+ L L LE + N+
Sbjct: 1 RVLHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALE- 56
Query: 151 EMPSELGDIKQLKSLDFSGNGLNGT-IPSRLGDLTQLQDLDLSDNLLSG--SLPVSLLKN 207
+ ++ +L+ L N L + L +L L+L N L + L +
Sbjct: 57 -NVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Query: 208 LQSLSYL 214
L S+S +
Sbjct: 116 LPSVSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.5 bits (120), Expect = 4e-08
Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 6/121 (4%)
Query: 115 KMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNG 174
++L + L+ + L L + + L N P+ L ++ L+ L S N L
Sbjct: 1 RVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALEN 57
Query: 175 TIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKK 234
+L +LQ+L L +N L S + L + L L++ N L L +
Sbjct: 58 VDGVA--NLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ-EEGIQERLAE 114
Query: 235 L 235
+
Sbjct: 115 M 115
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 49.3 bits (117), Expect = 9e-08
Identities = 24/105 (22%), Positives = 32/105 (30%), Gaps = 10/105 (9%)
Query: 386 LDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLG-------S 438
L L+ LT + + L + L L+ N + P L L
Sbjct: 3 LHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALENVD 59
Query: 439 NNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTG 483
N + LL NN + L L LNL GN L
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 45.9 bits (108), Expect = 2e-06
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 11/104 (10%)
Query: 515 YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGL--------YVQSNKFYGEIPPEL 566
+L+ L +V L +THLDLS N L + +Q++ E +
Sbjct: 4 HLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGV 61
Query: 567 GNLVQLEYLDFSMNML-DGHIPEKLCSLPYLLYLNLADNRLEGE 609
NL +L+ L N L + L S P L+ LNL N L E
Sbjct: 62 ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 40.9 bits (95), Expect = 1e-04
Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 10/110 (9%)
Query: 449 YLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGS 508
L L + L+ + L +L +T L+L N L +PP ++ L N L
Sbjct: 2 VLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALENV 58
Query: 509 IPESLG------YLSGNKL-YGSVPTSFGNLNGLTHLDLSCNELDGIVGL 551
+ L N+L + + L L+L N L G+
Sbjct: 59 DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 108
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 37.4 bits (86), Expect = 0.001
Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 6/118 (5%)
Query: 291 INLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIP 350
++L L T+ ++ ++ L L +NR+ P + L+V N V
Sbjct: 3 LHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG 60
Query: 351 VSLWNSENLMEFNAASNLLEG-SLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNI 407
V N L E +N L+ + + + L L+L N L Q L +
Sbjct: 61 V--ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC-QEEGIQERLAEM 115
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.1 bits (125), Expect = 9e-08
Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 138 LETISLRSNSFTGEMPSELGD-IKQLKSLDFSGNGLNG----TIPSRLGDLTQLQDLDLS 192
++++ ++ + +EL ++Q + + GL I S L L +L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 193 DNLLSGSLPVSLLKNLQS----LSYLDVSNN 219
N L +L+ LQ+ + L + N
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.3 bits (123), Expect = 2e-07
Identities = 16/91 (17%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 152 MPSELGDIKQLKSLDFSGNGLNGT----IPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKN 207
L+ L + ++ + + + L L++LDLS+N L + + L+++
Sbjct: 361 CQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVES 420
Query: 208 LQS----LSYLDVSNNLLSGNIPPEIGNLKK 234
++ L L + + S + + L+K
Sbjct: 421 VRQPGCLLEQLVLYDIYWSEEMEDRLQALEK 451
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.0 bits (117), Expect = 8e-07
Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 30/117 (25%)
Query: 186 LQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPY 245
+Q LD+ LS + LL LQ + + + L+ +I +
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSA------------- 50
Query: 246 QLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELC-----NSGSLVEINLDGNM 297
+ L ++L +N+L + S + +++L
Sbjct: 51 ------------LRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (111), Expect = 4e-06
Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 9/90 (10%)
Query: 136 TRLETISLRSNSFTGE----MPSELGDIKQLKSLDFSGNGLNGTIPSRLGD-----LTQL 186
+ L + L + + + L L+ LD S N L +L + L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 187 QDLDLSDNLLSGSLPVSLLKNLQSLSYLDV 216
+ L L D S + L + L V
Sbjct: 429 EQLVLYDIYWSEEMEDRLQALEKDKPSLRV 458
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.3 bits (110), Expect = 6e-06
Identities = 19/126 (15%), Positives = 40/126 (31%), Gaps = 9/126 (7%)
Query: 47 WNKTTRHCHWFGVKCRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQ--- 103
++ + ++ ++ S LR+L L+ +
Sbjct: 328 CCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCS 387
Query: 104 -LSPQVSNLKRLKMLSVGENQLSGSIPSQLG-----LLTRLETISLRSNSFTGEMPSELG 157
L+ + L+ L + N L + QL LE + L ++ EM L
Sbjct: 388 SLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQ 447
Query: 158 DIKQLK 163
+++ K
Sbjct: 448 ALEKDK 453
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (108), Expect = 1e-05
Identities = 15/104 (14%), Positives = 33/104 (31%), Gaps = 17/104 (16%)
Query: 422 PMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLL 481
L L L +++ + +L +L L+L N L
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSC------------SSLAATLLANHSLRELDLSNNCL 409
Query: 482 TGSIPPEFGDSLK-----VQGLYLGHNQLTGSIPESLGYLSGNK 520
+ + +S++ ++ L L + + + L L +K
Sbjct: 410 GDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDK 453
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 6e-05
Identities = 22/119 (18%), Positives = 36/119 (30%), Gaps = 27/119 (22%)
Query: 167 FSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSL---LKNLQSLSYLDVSNNLLSG 223
G+ + L+ L L+D +S S SL L SL LD+SNN L
Sbjct: 352 LEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 411
Query: 224 NIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPREL 282
++ + +L+ + L + S + L
Sbjct: 412 AGILQLVESVRQ------------------------PGCLLEQLVLYDIYWSEEMEDRL 446
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (101), Expect = 7e-05
Identities = 15/119 (12%), Positives = 30/119 (25%), Gaps = 30/119 (25%)
Query: 429 ISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPE 488
+ + +LD+ L+ + L L + L LT + +
Sbjct: 2 LDIQSLDIQCEELS---------------DARWAELLPLLQQCQVVRLDDCGLTEARCKD 46
Query: 489 FGDSLK----VQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCN 543
+L+ + L L N+L + + L L
Sbjct: 47 ISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT-----------PSCKIQKLSLQNC 94
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 1e-04
Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 20/104 (19%)
Query: 383 LEKLDLSSNMLT-RQIPKKIGNLTNIQILKLNSNFFDGI----IPMEFGDCISLNTLDLG 437
++ LD+ L+ + + + L Q+++L+ I +L L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 438 SNNLN--GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGN 479
SN L G V+ L + + L+L
Sbjct: 64 SNELGDVGVHCVLQGLQTPS-------------CKIQKLSLQNC 94
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 1e-04
Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 5/75 (6%)
Query: 264 LKYISLSNNKLSGPIPRELCNS-GSLVEINLDGNMLSG----TIEDVFDRCTNLSELVLV 318
++ + + +LS EL + LD L+ I L+EL L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 319 NNRISGSIPEYISEL 333
+N + + +
Sbjct: 64 SNELGDVGVHCVLQG 78
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 1e-04
Identities = 22/99 (22%), Positives = 29/99 (29%), Gaps = 18/99 (18%)
Query: 531 NLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDG----HI 586
+L+ + LD+ C EL L L Q + + L I
Sbjct: 1 SLD-IQSLDIQCEELSD------------ARWAELLPLLQQCQVVRLDDCGLTEARCKDI 47
Query: 587 PEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLT 625
L P L LNL N L + Q L S
Sbjct: 48 SSALRVNPALAELNLRSNELGDVGVHC-VLQGLQTPSCK 85
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (95), Expect = 4e-04
Identities = 16/117 (13%), Positives = 28/117 (23%), Gaps = 24/117 (20%)
Query: 492 SLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGL 551
SL +Q L + +L+ + L L + L L
Sbjct: 1 SLDIQSLDIQCEELSDARWAEL---------------LPLLQQCQVVRLDDCGL------ 39
Query: 552 YVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEG 608
+ +I L L L+ N L + + L+
Sbjct: 40 ---TEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (91), Expect = 0.001
Identities = 20/105 (19%), Positives = 30/105 (28%), Gaps = 19/105 (18%)
Query: 529 FGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPE 588
+ L L L+ ++ S+ + L L LD S N L
Sbjct: 365 GQPGSVLRVLWLADCDV---------SDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 415
Query: 589 KLCS-----LPYLLYLNLADNRLEGEVPRS-----GICQNLSIIS 623
+L L L L D E+ +L +IS
Sbjct: 416 QLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVIS 460
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (91), Expect = 0.001
Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 10/110 (9%)
Query: 333 LPLKVFDLQYNNFTGVIPVSLWNS-ENLMEFNAASNLLEGSLSWEISNAVA----LEKLD 387
L ++ D+Q + L + L + +IS+A+ L +L+
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 388 LSSNMLTRQIPKKIG-----NLTNIQILKLNSNFFDGIIPMEFGDCISLN 432
L SN L + IQ L L + G +
Sbjct: 62 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTL 111
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (89), Expect = 0.002
Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 25/103 (24%)
Query: 335 LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLT 394
L+V L + + SL + + +L +LDLS+N L
Sbjct: 371 LRVLWLADCDVSDSSCSSLAAT--------------------LLANHSLRELDLSNNCLG 410
Query: 395 RQIPKKIG-----NLTNIQILKLNSNFFDGIIPMEFGDCISLN 432
++ ++ L L ++ +
Sbjct: 411 DAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDK 453
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (88), Expect = 0.003
Identities = 15/117 (12%), Positives = 36/117 (30%), Gaps = 28/117 (23%)
Query: 303 EDVFDRCTNLSELVLVNNRISG----SIPEYISELP-LKVFDLQYNNFTGVIPVSLWNSE 357
+ + + L L L + +S S+ + L+ DL N + L
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQL---- 417
Query: 358 NLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNL----TNIQIL 410
+ LE+L L + ++ ++ L +++++
Sbjct: 418 --------VESVR-------QPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (87), Expect = 0.004
Identities = 18/129 (13%), Positives = 34/129 (26%), Gaps = 44/129 (34%)
Query: 205 LKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSML 264
+ L L +++ +S + + + L
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAAT-------------------------LLANHSL 399
Query: 265 KYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISG 324
+ + LSNN L +L S V L +LVL + S
Sbjct: 400 RELDLSNNCLGDAGILQLVES-------------------VRQPGCLLEQLVLYDIYWSE 440
Query: 325 SIPEYISEL 333
+ + + L
Sbjct: 441 EMEDRLQAL 449
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 52.2 bits (123), Expect = 1e-07
Identities = 42/350 (12%), Positives = 93/350 (26%), Gaps = 35/350 (10%)
Query: 160 KQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSL---LKNLQSLSYLDV 216
K LK + ++ + L + ++++ LS N + L + + + L +
Sbjct: 8 KSLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEF 66
Query: 217 SNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSG 276
S+ L+ L L +L LS +
Sbjct: 67 SDIFTGRVKDEIPEALRLLLQALLKC--PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLE 124
Query: 277 PIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLK 336
+ G + + + L ++ NR+ + ++
Sbjct: 125 HLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 184
Query: 337 VFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQ 396
L L+E A L+ + + +++ +
Sbjct: 185 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTF----------THLGSSA 234
Query: 397 IPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCI------SLNTLDLGSNNLNGCVVVVYL 450
+ + + N++ L LN D L TL L N +
Sbjct: 235 LAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL------- 287
Query: 451 LLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLT--GSIPPEFGDSLKVQGL 498
+ + ++ +L L L GN + + E + +G
Sbjct: 288 ----DAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGR 333
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 47.6 bits (111), Expect = 4e-06
Identities = 49/348 (14%), Positives = 92/348 (26%), Gaps = 58/348 (16%)
Query: 264 LKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSG----TIEDVFDRCTNLSELVLVN 319
LK +++ + L S+ EI L GN + + + +L +
Sbjct: 10 LKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSD 68
Query: 320 N---RISGSIPEYISELP--------LKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNL 368
R+ IPE + L L L N F L + + L
Sbjct: 69 IFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYL 128
Query: 369 LEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDC 428
L + +A +L+ N + P + L+ S
Sbjct: 129 HNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 188
Query: 429 ISLNTLDLGSNNLNGCVVVVYLLLNNNMLS--------------GKIPGSLSRLTNLTTL 474
++ + G +++ L L + +L NL L
Sbjct: 189 HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 248
Query: 475 NLFGNLLTGSIPPEFGDSL------KVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTS 528
L LL+ D+ +Q L L +N++ +L
Sbjct: 249 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK-----------TVI 297
Query: 529 FGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLD 576
+ L L+L+ N ++ E+ +
Sbjct: 298 DEKMPDLLFLELNGNRFSEE-----------DDVVDEIREVFSTRGRG 334
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 47.2 bits (110), Expect = 6e-06
Identities = 50/333 (15%), Positives = 107/333 (32%), Gaps = 38/333 (11%)
Query: 138 LETISLRSNSFTGE----MPSELGDIKQLKSLDFSGNGLNG----TIPSRLGDLTQLQDL 189
+E SL+ ++ T E + + L + +K + SGN + + + L+
Sbjct: 5 IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIA 64
Query: 190 DLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSL 249
+ SD + + + L+ L + L + + + L
Sbjct: 65 EFSDIFTG-RVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPL 123
Query: 250 FVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLS-GTIEDVFDR 308
+ I + + ++ N+ L I N L G++++
Sbjct: 124 EHLYLHNNGLGPQAGAKI--ARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 181
Query: 309 CTNLSELVLVNNRISGSIPEYISELPLKVF-------------DLQYNNFTGVIPVSLWN 355
+ L V +G PE I L L+ + + + + ++L +
Sbjct: 182 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 241
Query: 356 SENLMEFNAASNLLEGSLSWEISNAVA------LEKLDLSSNMLTRQIPKKI-----GNL 404
NL E LL + + +A + L+ L L N + + + +
Sbjct: 242 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKM 301
Query: 405 TNIQILKLNSNFF--DGIIPMEFGDCISLNTLD 435
++ L+LN N F + + E + S
Sbjct: 302 PDLLFLELNGNRFSEEDDVVDEIREVFSTRGRG 334
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 50.0 bits (118), Expect = 3e-07
Identities = 41/215 (19%), Positives = 69/215 (32%), Gaps = 17/215 (7%)
Query: 135 LTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194
L I+ ++ T + D+ + +L G G+ + L L L+L DN
Sbjct: 18 LANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDN 73
Query: 195 LLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLK--------KLSDLYLGIGPYQ 246
++ P+ L + L +S + ++ L
Sbjct: 74 QITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 133
Query: 247 LSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVF 306
L L + +IT + LS L N L + D N +S
Sbjct: 134 LYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--L 191
Query: 307 DRCTNLSELVLVNNRISGSIPEYISELP-LKVFDL 340
NL E+ L NN+IS P ++ L + L
Sbjct: 192 ASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 48.5 bits (114), Expect = 9e-07
Identities = 34/216 (15%), Positives = 70/216 (32%), Gaps = 23/216 (10%)
Query: 160 KQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNN 219
+ + + T+ DL + L ++ + ++ L +L L++ +N
Sbjct: 19 ANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT---IEGVQYLNNLIGLELKDN 73
Query: 220 LLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIP 279
+ + NL K+++L L P + + + I+
Sbjct: 74 QI--TDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNL 131
Query: 280 RELCNSGSLVEI-----------NLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPE 328
+ L + + L + + L+ L +N+IS P
Sbjct: 132 QVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP- 190
Query: 329 YISELP-LKVFDLQYNNFTGVIPVSLWNSENLMEFN 363
++ LP L L+ N + V P L N+ NL
Sbjct: 191 -LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVT 223
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 46.6 bits (109), Expect = 5e-06
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 152 MPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSL 211
+ L ++ +L +L N ++ P L L L ++ L +N +S P L N +L
Sbjct: 165 DLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP---LANTSNL 219
Query: 212 SYLDVSN 218
+ ++N
Sbjct: 220 FIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 45.0 bits (105), Expect = 1e-05
Identities = 47/232 (20%), Positives = 75/232 (32%), Gaps = 32/232 (13%)
Query: 403 NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP 462
L N + + + D + TL + I
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVT-----------------TIE 57
Query: 463 GSLSRLTNLTTLNLFGNLLTGSIPPE--FGDSLKVQGLYLGHNQLTGSIPESLGYLSGNK 520
G + L NL L L N +T P + + N + +S+ L
Sbjct: 58 G-VQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTS 116
Query: 521 LYGSVPTSFGNLNGLTHLDLSCNELDGIVGL-------YVQSNKFYGEIPPELGNLVQLE 573
+ T L+ L L L N++ I L Y+ L NL +L
Sbjct: 117 TQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLT 176
Query: 574 YLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLT 625
L N + P L SLP L+ ++L +N++ P + NL I++LT
Sbjct: 177 TLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLAN-TSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 43.5 bits (101), Expect = 4e-05
Identities = 29/257 (11%), Positives = 78/257 (30%), Gaps = 48/257 (18%)
Query: 183 LTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGI 242
L + + ++ ++ + L + +LS G + +
Sbjct: 18 LANAIKIAAGKSNVTDTVTQADLDGITTLS--------AFGT------GVTTIEG----- 58
Query: 243 GPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTI 302
+ + L + L +N+++ P + + +E++ + I
Sbjct: 59 ---------------VQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAI 103
Query: 303 EDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEF 362
+ T + + + + L L + + + + + S +
Sbjct: 104 AGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQV 163
Query: 363 NAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIP 422
S ++N L L N ++ P + +L N+ + L +N + P
Sbjct: 164 ---------SDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP 212
Query: 423 MEFGDCISLNTLDLGSN 439
+ +L + L +N
Sbjct: 213 --LANTSNLFIVTL-TN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 40.4 bits (93), Expect = 4e-04
Identities = 36/227 (15%), Positives = 64/227 (28%), Gaps = 27/227 (11%)
Query: 383 LEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN 442
K+ + +T + + +L I L I +++ +L L+L N +
Sbjct: 21 AIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTTIEGVQY--LNNLIGLELKDNQIT 76
Query: 443 GCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGH 502
+ L + P +L + I + L
Sbjct: 77 DLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYL 136
Query: 503 NQLTGSIPESLG------YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSN 556
+ + L YLS S T NL+ LT L N++ I
Sbjct: 137 DLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI-------- 188
Query: 557 KFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLAD 603
L +L L + N + P L + L + L +
Sbjct: 189 -------SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 7e-04
Identities = 31/240 (12%), Positives = 65/240 (27%), Gaps = 39/240 (16%)
Query: 339 DLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIP 398
+N T + + + + + +A + ++ + L L+L N +
Sbjct: 25 AAGKSNVTDTVTQA--DLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKDNQI--TDL 78
Query: 399 KKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLS 458
+ NLT I L+L+ N + + I L + + L +
Sbjct: 79 APLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL 138
Query: 459 GKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSG 518
+I L S + K+ L N+++ P
Sbjct: 139 NQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP-------- 190
Query: 519 NKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFS 578
+L L + L N++ + L N L + +
Sbjct: 191 ----------LASLPNLIEVHLKNNQISDV---------------SPLANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 8e-04
Identities = 30/217 (13%), Positives = 75/217 (34%), Gaps = 11/217 (5%)
Query: 287 SLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELP-LKVFDLQYNNF 345
+ ++I + ++ T+ ++ L ++ +I + L L +L+ N
Sbjct: 20 NAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKDNQI 75
Query: 346 TGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLT 405
T + P+ +E + +++ S +++ + L
Sbjct: 76 TDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLY 135
Query: 406 NIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSL 465
N + G+ +++ + D L + L ++N +S P L
Sbjct: 136 LDLNQITNISPLAGLTNLQYLSIGNAQVSD--LTPLANLSKLTTLKADDNKISDISP--L 191
Query: 466 SRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGH 502
+ L NL ++L N ++ P +L + + L +
Sbjct: 192 ASLPNLIEVHLKNNQISDVSPLANTSNLFI--VTLTN 226
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.6 bits (111), Expect = 2e-06
Identities = 24/227 (10%), Positives = 58/227 (25%), Gaps = 4/227 (1%)
Query: 189 LDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLS 248
++ ++ +P L +N L L L + +
Sbjct: 13 FLCQESKVT-EIPSDLPRNAI---ELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEV 68
Query: 249 LFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDR 308
+ + + + + ++ + L N L+ N L + +
Sbjct: 69 IEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQ 128
Query: 309 CTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNL 368
L +N + L N + + ++ + +N
Sbjct: 129 KVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNN 188
Query: 369 LEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSN 415
LE + A LD+S + + NL ++ +
Sbjct: 189 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL 235
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.2 bits (97), Expect = 1e-04
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Query: 180 LGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPP 227
+ LD+S + SLP L+NL+ L N +P
Sbjct: 197 FHGASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNL---KKLPT 240
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (95), Expect = 3e-04
Identities = 29/241 (12%), Positives = 71/241 (29%), Gaps = 20/241 (8%)
Query: 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319
+CS + +K++ IP +L + +E+ L + F +L ++ +
Sbjct: 7 HCS-NRVFLCQESKVTE-IPSDLPRN--AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQ 62
Query: 320 NRISGSIPEYISELP-------------LKVFDLQYNNFTGVIPVSLWNSENLMEFNAAS 366
N + I + L + + + L ++ +
Sbjct: 63 NDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVH 122
Query: 367 NLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426
+ ++ + I L I ++++ F+G E
Sbjct: 123 KIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELN 182
Query: 427 DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIP 486
+ N +L ++ +G V L ++ + L L L + + +P
Sbjct: 183 LSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL---KKLP 239
Query: 487 P 487
Sbjct: 240 T 240
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.9 bits (100), Expect = 3e-05
Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 17/160 (10%)
Query: 387 DLSSNMLTRQIPKKIGNLTNIQILKLN-SNFFDGIIPMEFGDCISLNTLDLGSNNLNG-- 443
+L + Q+ + + L+ + + LN + L
Sbjct: 3 ELKPEQV-EQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMAATLRIIE 61
Query: 444 --CVVVVYLLLNNNMLSGK--IPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLY 499
++ L L+NN L + + + NL LNL GN L + LK++ L+
Sbjct: 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELW 121
Query: 500 LGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLD 539
L N L+ + + Y+S L LD
Sbjct: 122 LDGNSLSDTFRDQSTYIS---------AIRERFPKLLRLD 152
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.7 bits (84), Expect = 0.004
Identities = 23/160 (14%), Positives = 42/160 (26%), Gaps = 31/160 (19%)
Query: 452 LNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPE 511
L + ++ +S+ + + L +L P+ L +
Sbjct: 4 LKPEQVE-QLKLIMSKRYDGSQQAL--DLKGLRSDPDLVAQNIDVVLNRRSSMAA----- 55
Query: 512 SLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQ 571
++ N+ L L+LS N L ++ +
Sbjct: 56 ------------TLRIIEENIPELLSLNLSNNRLYR-----------LDDMSSIVQKAPN 92
Query: 572 LEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVP 611
L+ L+ S N L L L L N L
Sbjct: 93 LKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFR 132
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 42.9 bits (99), Expect = 5e-05
Identities = 43/208 (20%), Positives = 64/208 (30%), Gaps = 22/208 (10%)
Query: 308 RCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLW-NSENLMEFNAAS 366
C V R IP I L L N + L+ +L++
Sbjct: 5 MCHCEGTTVDCTGRGLKEIPRDIP-LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKR 63
Query: 367 NLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFG 426
N L G A +++L L N + K L ++ L L N ++P F
Sbjct: 64 NQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFE 123
Query: 427 DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIP 486
SL +L+L SN N + + +L G P
Sbjct: 124 HLNSLTSLNLASNPFNCNCHLAWFAEWLRK-----------------KSLNGGAARCGAP 166
Query: 487 PEFGDSLKVQGLYLGHNQLTGSIPESLG 514
+ D VQ L H++ S S G
Sbjct: 167 SKVRD---VQIKDLPHSEFKCSSENSEG 191
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 41.9 bits (97), Expect = 1e-04
Identities = 28/200 (14%), Positives = 53/200 (26%), Gaps = 25/200 (12%)
Query: 385 KLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGC 444
K +L +T + + L +I + N++ + +++ ++ L L N L
Sbjct: 28 KDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQGIQY--LPNVTKLFLNGNKLTDI 83
Query: 445 VVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQ 504
+ L + + +L I G Q L
Sbjct: 84 KPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGN 143
Query: 505 LTGSIPESLGYLSGNKLYGSV------PTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKF 558
+ L L+ L L +L LS N + +
Sbjct: 144 NKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL---------- 193
Query: 559 YGEIPPELGNLVQLEYLDFS 578
L L L+ L+
Sbjct: 194 -----RALAGLKNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 40.0 bits (92), Expect = 6e-04
Identities = 37/231 (16%), Positives = 61/231 (26%), Gaps = 41/231 (17%)
Query: 387 DLSSNMLTRQIPKKIG------NLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNN 440
L S +T +P I L + + S++ + +++
Sbjct: 2 PLGSETIT--VPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSD 57
Query: 441 LNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGS----------IPPEFG 490
+ + L N+T L L GN LT
Sbjct: 58 IKSVQ------------------GIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDE 99
Query: 491 DSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVG 550
+ +K +L E G N L L D++ +
Sbjct: 100 NKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLD 159
Query: 551 LYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNL 601
+ +I P L L +L+ L S N + L L L L L
Sbjct: 160 TLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD--LRALAGLKNLDVLEL 207
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 198 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 38.9 bits (89), Expect = 0.001
Identities = 32/180 (17%), Positives = 58/180 (32%), Gaps = 24/180 (13%)
Query: 151 EMPSELGDIKQLKSLDFSGNGLNGTIP------SRLGDLTQLQDLDLSDNLLSGSLPVSL 204
+ + K + + + L+G IP + L L + L LS N + +S
Sbjct: 9 DAIRIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKISSLSG 68
Query: 205 LKNLQSLSYLD---------VSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRIT 255
++NL+ LS + + + LS + + L + +IT
Sbjct: 69 MENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKIT 128
Query: 256 PEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSEL 315
+ L + L+G L + N S +V R NL +L
Sbjct: 129 NWGEIDKLAALDKLEDLLLAG---------NPLYNDYKENNATSEYRIEVVKRLPNLKKL 179
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (87), Expect = 0.002
Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 8/147 (5%)
Query: 95 LSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPS 154
L+ L+ + + Q +N R + L + ++ I + L + + I N
Sbjct: 3 LTAELI--EQAAQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR--KLD 57
Query: 155 ELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYL 214
+++LK+L + N + L L +L L++N L + L +L+SL+YL
Sbjct: 58 GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYL 117
Query: 215 DVSN---NLLSGNIPPEIGNLKKLSDL 238
+ I + ++ L
Sbjct: 118 CILRNPVTNKKHYRLYVIYKVPQVRVL 144
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.8 bits (84), Expect = 0.004
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 6/138 (4%)
Query: 81 SPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLET 140
+ N R LDL + + + L + + +N++ LL RL+T
Sbjct: 11 AAQYTNAVRDRELDLRGYKI-PVIENLGATLDQFDAIDFSDNEI--RKLDGFPLLRRLKT 67
Query: 141 ISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNG-TIPSRLGDLTQLQDLDLSDNLLSG- 198
+ + +N + L L + N L L L L L + N ++
Sbjct: 68 LLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNK 127
Query: 199 -SLPVSLLKNLQSLSYLD 215
+ ++ + + LD
Sbjct: 128 KHYRLYVIYKVPQVRVLD 145
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 885 | |||
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.98 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.98 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.98 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.97 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.96 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.95 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.93 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.93 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.92 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.92 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.91 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.88 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.86 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.84 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.81 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.77 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.75 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.75 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.75 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.74 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.73 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.73 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.73 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.72 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.71 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.54 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.54 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.53 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.52 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.52 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.48 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.45 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.41 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.35 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.35 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.31 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.3 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.48 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.45 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.3 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.84 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.46 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.44 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.3 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.82 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.5 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.38 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.03 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 95.29 |
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=7.7e-43 Score=375.33 Aligned_cols=291 Identities=29% Similarity=0.513 Sum_probs=242.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcc--cCCccccCC----cEEEEEEecccccc--cccccccCCCCCCEE
Q 047790 22 DEPKQERRSLVHFKNSLQNPQVLSGWNKTTRHCH--WFGVKCRHS----RVVSLVIQTQSLKG--PVSPFLFNLSSLRIL 93 (885)
Q Consensus 22 ~~~~~~~~aLl~~k~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~----~v~~l~l~~~~l~g--~~~~~l~~l~~L~~L 93 (885)
-|.++||+||++||+++.++..+++|+.++|||. |.||+|+.. ||++|+|+++++.| ++|+.+++|++|++|
T Consensus 2 ~c~~~e~~aLl~~k~~~~~~~~l~sW~~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L 81 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred CCCHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCcccccc
Confidence 3899999999999999999888999999999994 999999863 79999999999988 588999999999999
Q ss_pred ecCC-CcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcC
Q 047790 94 DLSK-NLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGL 172 (885)
Q Consensus 94 ~Ls~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 172 (885)
||++ |+++|.+|++|++|++|++|+|++|++.+..|..+..+.+|++++++.|.+.+.+|..++++++|+.+++++|++
T Consensus 82 ~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l 161 (313)
T d1ogqa_ 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161 (313)
T ss_dssp EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCC
T ss_pred ccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeecccccc
Confidence 9997 899999999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred CccCCcccCCCCCC-ccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccc
Q 047790 173 NGTIPSRLGDLTQL-QDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFV 251 (885)
Q Consensus 173 ~~~~p~~~~~l~~L-~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~ 251 (885)
.+.+|..+..+.++ +.+++++|++++..|.. +..+.. .+++++++.+.+.+|..+..+++++.+++..+.. .
T Consensus 162 ~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~-~~~l~~-~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l-----~ 234 (313)
T d1ogqa_ 162 SGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT-FANLNL-AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL-----A 234 (313)
T ss_dssp EEECCGGGGCCCTTCCEEECCSSEEEEECCGG-GGGCCC-SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEE-----C
T ss_pred cccccccccccccccccccccccccccccccc-cccccc-cccccccccccccccccccccccccccccccccc-----c
Confidence 99999999888876 78999999998766655 666544 4788888888888887777777777777654432 2
Q ss_pred cccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccc
Q 047790 252 GRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNR 321 (885)
Q Consensus 252 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 321 (885)
+. ++.+..+++|++|+|++|+++|.+|..++.+++|++|+|++|+|+|.+|+ +..+++|+.+++++|+
T Consensus 235 ~~-~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 235 FD-LGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNK 302 (313)
T ss_dssp CB-GGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSS
T ss_pred cc-ccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCc
Confidence 22 33566677777777777777777777777777777777777777766664 4566667777777765
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-40 Score=350.04 Aligned_cols=197 Identities=25% Similarity=0.361 Sum_probs=179.5
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
+|++.++||+|+||.||+|++. +|+.||+|++........+.+.+|++++++++||||+++++++.+++..|+||||++
T Consensus 21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~ 100 (293)
T d1yhwa1 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (293)
T ss_dssp TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence 5999999999999999999864 589999999976655556789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
||+|.+++..+ .+++..++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||+|+.+.... ....
T Consensus 101 gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~-~~~~ 174 (293)
T d1yhwa1 101 GGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRS 174 (293)
T ss_dssp TCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-CCBC
T ss_pred CCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCcHHHeEECCCCcEeeccchhheeecccc-cccc
Confidence 99999988753 4899999999999999999999 8999999999999999999999999999998875432 3334
Q ss_pred CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 821 DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
...||+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 175 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~ 218 (293)
T d1yhwa1 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218 (293)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCC
Confidence 56799999999999999999999999999999999999999964
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-40 Score=343.64 Aligned_cols=199 Identities=25% Similarity=0.404 Sum_probs=178.5
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
+.+|++.+.||+|+||.||+|+++ +++.||+|++.+.. ......+.+|++++++++||||+++++++.+++..|+|
T Consensus 5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEE
Confidence 457999999999999999999875 58899999986532 33456789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++|+|.+++.... .+++..+..++.|+++|++||| ++||+||||||+||+++.++.+||+|||+|......
T Consensus 85 mEy~~~g~L~~~l~~~~-~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~- 159 (263)
T d2j4za1 85 LEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 159 (263)
T ss_dssp EECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC-
T ss_pred EeecCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeeeeccccceecCCCCEeecccceeeecCCC-
Confidence 99999999999998654 4899999999999999999999 899999999999999999999999999999775432
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 160 --~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~ 207 (263)
T d2j4za1 160 --RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 207 (263)
T ss_dssp --CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred --cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCC
Confidence 223457999999999999999999999999999999999999999653
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-40 Score=346.67 Aligned_cols=201 Identities=24% Similarity=0.358 Sum_probs=175.3
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+|++.++||+|+||.||+|++. +++.||+|++.... ....+++.+|++++++++||||+++++++.+++..|+||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 57999999999999999999875 58999999987543 23345789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC-CC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE-SH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~-~~ 817 (885)
+++|+|.+++..+ ..+++..++.++.|+++|++||| ++||+||||||+||+++.++.+||+|||+|+...... ..
T Consensus 85 ~~gg~L~~~l~~~-~~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~ 160 (271)
T d1nvra_ 85 CSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 160 (271)
T ss_dssp CTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCcHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccc
Confidence 9999999998754 45999999999999999999999 8999999999999999999999999999998765432 22
Q ss_pred cccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...
T Consensus 161 ~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~ 209 (271)
T d1nvra_ 161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 209 (271)
T ss_dssp CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred cccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCC
Confidence 3345679999999999988876 57899999999999999999999754
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-40 Score=348.63 Aligned_cols=200 Identities=20% Similarity=0.291 Sum_probs=177.9
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
.|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~ 92 (288)
T d2jfla1 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 92 (288)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC
Confidence 4899999999999999999875 588999999977655556788999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
+|+|.+++......+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||+|....... ....
T Consensus 93 ~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~-~~~~ 168 (288)
T d2jfla1 93 GGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRRD 168 (288)
T ss_dssp TEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHH-HHHT
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEeecChhheeECCCCCEEEEechhhhccCCCc-cccc
Confidence 99999998776667999999999999999999999 8999999999999999999999999999997654311 1223
Q ss_pred CCCCCCccCCccccc-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 821 DTADTIGYVPSEYGQ-----AGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...||+.|+|||++. +..++.++||||+||++|||++|+.||...
T Consensus 169 ~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~ 218 (288)
T d2jfla1 169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 218 (288)
T ss_dssp CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCC
Confidence 457999999999874 456789999999999999999999999754
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-40 Score=344.13 Aligned_cols=201 Identities=24% Similarity=0.340 Sum_probs=176.3
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.+|++.+.||+|+||.||+|++. +++.||+|++.+.. ....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 35999999999999999999875 58999999987532 234567999999999999999999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC-
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE- 815 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~- 815 (885)
||++||+|.+++.... .+++..++.++.|++.|++||| +++|+||||||+||++++++.+||+|||.|+.+....
T Consensus 88 Ey~~gg~L~~~~~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~ 163 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 163 (288)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EccCCCCHHHhhhccC-CCCHHHHHHHHHHHHHHHHhhc---cccEEcCcCCccccccCCCceEEecccccceecccCCc
Confidence 9999999999988654 4999999999999999999999 9999999999999999999999999999998775432
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~ 213 (288)
T d1uu3a_ 164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 213 (288)
T ss_dssp ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCc
Confidence 22334457999999999999999999999999999999999999999753
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-40 Score=352.11 Aligned_cols=199 Identities=25% Similarity=0.333 Sum_probs=176.6
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+|++.++||+|+||.||+|++. +|+.||+|+++... .....++.+|++++++++||||+++++++.+++..|+||||
T Consensus 6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy 85 (322)
T d1s9ja_ 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 85 (322)
T ss_dssp GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 46999999999999999999875 58899999987543 23346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCC-CceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKP-YIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~-~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
++||+|.+++.+.. .+++..++.++.|++.|+.||| ++ ||+||||||+||+++.++.+||+|||+|..+.+.
T Consensus 86 ~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH---~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--- 158 (322)
T d1s9ja_ 86 MDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 158 (322)
T ss_dssp CTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred CCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCC---
Confidence 99999999998654 4999999999999999999999 64 8999999999999999999999999999876432
Q ss_pred cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.+..
T Consensus 159 ~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~ 207 (322)
T d1s9ja_ 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 207 (322)
T ss_dssp TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCC
T ss_pred ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 2234579999999999999999999999999999999999999997643
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-39 Score=337.85 Aligned_cols=198 Identities=27% Similarity=0.470 Sum_probs=167.6
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
..|++.++||+|+||.||+|++.+++.||+|+++... ...+++.+|++++++++||||+++++++..++..++||||++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~ 83 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence 4689999999999999999999888999999997643 346789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
+|+|.+++......+++..+..++.|++.|++|+| +.+|+||||||+||+++.++.+||+|||+|+...........
T Consensus 84 ~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~ 160 (263)
T d1sm2a_ 84 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 160 (263)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhh---ccceeecccchhheeecCCCCeEecccchheeccCCCceeec
Confidence 99999999877777899999999999999999999 899999999999999999999999999999877654444444
Q ss_pred CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 047790 821 DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPT 862 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~ 862 (885)
...+|..|+|||++.+..++.++|||||||++|||+|+..|+
T Consensus 161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~ 202 (263)
T d1sm2a_ 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 202 (263)
T ss_dssp ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCC
Confidence 567899999999999999999999999999999999954444
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-39 Score=333.16 Aligned_cols=196 Identities=27% Similarity=0.417 Sum_probs=169.3
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEe----CCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSV----GEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~----~~~~~ 733 (885)
..|+++++||+|+||.||+|++. +++.||+|++.... ....+++.+|++++++++||||+++++++.. +...|
T Consensus 9 ry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ 88 (270)
T d1t4ha_ 9 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 88 (270)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred CEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEE
Confidence 45689999999999999999875 58889999986543 2334578999999999999999999999864 34679
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCC--ceecCCCCCcEEEc-CCCcEEEeeccCccc
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPY--IIHMDIKTSNILLN-DYFEAKVSDFGLARL 810 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~--i~H~dlkp~Nil~~-~~~~vkl~Dfg~a~~ 810 (885)
+||||+++|+|.+++.... .+++..+..++.|+++|++||| +++ |+||||||+||+++ +++.+||+|||+|+.
T Consensus 89 ivmE~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~yLH---~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~ 164 (270)
T d1t4ha_ 89 LVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 164 (270)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEeCCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHHHH---HCCCCEEeCCcChhhceeeCCCCCEEEeecCccee
Confidence 9999999999999998653 4899999999999999999999 888 99999999999996 578999999999976
Q ss_pred ccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
... .......||+.|+|||++.+ .++.++||||+||++|||++|+.||..
T Consensus 165 ~~~---~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~ 214 (270)
T d1t4ha_ 165 KRA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE 214 (270)
T ss_dssp CCT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccC---CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCC
Confidence 433 22334579999999999876 599999999999999999999999964
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-39 Score=344.70 Aligned_cols=201 Identities=19% Similarity=0.217 Sum_probs=179.9
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.+.||+|+||.||+|++. +++.||+|++++.. .....++.+|++++++++||||+++++++.+++..|+|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 356999999999999999999874 59999999997542 23457788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||++||+|.+++.... .+++..++.++.|++.|++||| ++||+||||||+||+++.+|.+||+|||.|+......
T Consensus 84 ~ey~~gg~L~~~~~~~~-~~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~ 159 (337)
T d1o6la_ 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred eeccCCCchhhhhhccc-CCcHHHHHHHHHHHhhhhhhhh---hcCccccccCHHHeEecCCCCEEEeecccccccccCC
Confidence 99999999999988654 4899999999999999999999 9999999999999999999999999999998765422
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 160 -~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~ 208 (337)
T d1o6la_ 160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208 (337)
T ss_dssp -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCc
Confidence 2334467999999999999999999999999999999999999999754
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.1e-39 Score=352.51 Aligned_cols=201 Identities=21% Similarity=0.353 Sum_probs=180.7
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.++||+|+||.||+|++. +|+.||+|++........+.+.+|++++++++||||+++++++.+++..|+||||
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 104 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 104 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 357999999999999999999875 5889999999876555567889999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc--CCCcEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN--DYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~--~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
++||+|.+++......+++..+..++.|++.|++||| ++||+||||||+||+++ .++.+||+|||+|+.+...
T Consensus 105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~-- 179 (350)
T d1koaa2 105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 179 (350)
T ss_dssp CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT--
T ss_pred CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheecccc--
Confidence 9999999999766666999999999999999999999 99999999999999996 4578999999999887643
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.
T Consensus 180 ~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~ 228 (350)
T d1koaa2 180 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE 228 (350)
T ss_dssp SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCC
Confidence 2233457899999999999999999999999999999999999999754
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.9e-39 Score=349.34 Aligned_cols=201 Identities=20% Similarity=0.291 Sum_probs=181.4
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
..+|++.+.||+|+||.||+|++. +|+.||+|+++.........+.+|++++++++||||+++++++.+++..|+||||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 456999999999999999999874 5999999999776555566788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc--CCCcEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN--DYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~--~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
++||+|.+.+......+++..++.++.|++.|++||| +.||+||||||+||+++ +.+.+||+|||+|..+...
T Consensus 108 ~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~-- 182 (352)
T d1koba_ 108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-- 182 (352)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--
T ss_pred CCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeecccceecCCC--
Confidence 9999999988776667999999999999999999999 99999999999999997 6789999999999887653
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......+|+.|+|||++.+..++.++||||+||++|+|++|+.||.+.
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 231 (352)
T d1koba_ 183 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE 231 (352)
T ss_dssp SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 2234457899999999999999999999999999999999999999653
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-39 Score=338.06 Aligned_cols=201 Identities=23% Similarity=0.288 Sum_probs=164.1
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEe--CCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSV--GEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 735 (885)
.+|++.+.||+|+||.||+|++. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+ ++..|+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 46999999999999999999875 588999999875432 234568899999999999999999998864 4568999
Q ss_pred EecccCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhccCCCC-----ceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 736 YEYMVNGSLDDWLRN---RAASLDWGKRCKIAYGAARGISFLHHGFKPY-----IIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~-----i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
|||+++|+|.+++.. ....+++..++.++.|++.|++||| +++ |+||||||+||+++.++.+||+|||.
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH---~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~ 160 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 160 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HHCC---------CCGGGEEECTTSCEEECCHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccc
Confidence 999999999999864 3456999999999999999999999 554 99999999999999999999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
|+.+.... .......+|+.|+|||++.+..++.++||||+||++|||+||+.||...
T Consensus 161 a~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~ 217 (269)
T d2java1 161 ARILNHDT-SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF 217 (269)
T ss_dssp HHHC------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred eeecccCC-CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCC
Confidence 98875422 2234467899999999999999999999999999999999999999753
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.7e-38 Score=338.49 Aligned_cols=197 Identities=22% Similarity=0.321 Sum_probs=177.6
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.++||+|+||.||+|+++ +|+.||+|++++.. ....+++.+|++++++++||||+++++++.+++..|+|
T Consensus 3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeE
Confidence 356999999999999999999875 58999999997532 23457789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||++||++..++.... ..++..++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||.|+.....
T Consensus 83 mE~~~gg~l~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~- 157 (316)
T d1fota_ 83 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 157 (316)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred eeecCCccccccccccc-cccccHHHHHHHHHHHhhhhhc---cCcEEccccCchheeEcCCCCEEEecCccceEeccc-
Confidence 99999999999888544 4888999999999999999999 999999999999999999999999999999876542
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 158 ---~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~ 203 (316)
T d1fota_ 158 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 203 (316)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ---cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCC
Confidence 2346799999999999999999999999999999999999999964
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.4e-39 Score=340.98 Aligned_cols=198 Identities=25% Similarity=0.367 Sum_probs=160.6
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+|++.+.||+|+||.||+|++. +++.||+|++.+... .....+.+|++++++++||||+++++++.+++..|+||||
T Consensus 9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~ 88 (307)
T d1a06a_ 9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQL 88 (307)
T ss_dssp GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 45999999999999999999875 588999999975432 2345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc---CCCcEEEeeccCcccccCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN---DYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~---~~~~vkl~Dfg~a~~~~~~~ 815 (885)
++||+|.+++..+ +.+++..+..++.|++.|++||| ++||+||||||+||++. +++.+||+|||+|+......
T Consensus 89 ~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~ 164 (307)
T d1a06a_ 89 VSGGELFDRIVEK-GFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 164 (307)
T ss_dssp CCSCBHHHHHHTC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC----------
T ss_pred cCCCcHHHhhhcc-cCCCHHHHHHHHHHHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEeccceeEEccCCC
Confidence 9999999999854 45999999999999999999999 99999999999999995 57889999999998765422
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 165 --~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~ 211 (307)
T d1a06a_ 165 --VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 211 (307)
T ss_dssp ----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred --eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCC
Confidence 22345799999999999999999999999999999999999999964
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-39 Score=334.95 Aligned_cols=199 Identities=30% Similarity=0.467 Sum_probs=168.3
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+.|++.++||+|+||.||+|++.+ .||+|+++... ....+.+.+|++++++++||||+++++++. ++..++||||
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~Ey 84 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQW 84 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred ccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEec
Confidence 568899999999999999998643 59999987543 334567899999999999999999999875 4568999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC-C
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES-H 817 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~-~ 817 (885)
+++|+|.+++......+++..+..++.|+++|++||| +++|+||||||+||+++.++.+||+|||+|+....... .
T Consensus 85 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~ 161 (276)
T d1uwha_ 85 CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161 (276)
T ss_dssp CCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred CCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHh---cCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence 9999999999876677999999999999999999999 89999999999999999999999999999987654222 2
Q ss_pred cccCCCCCCccCCcccccCC---CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAG---RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......+|+.|+|||++.+. .++.++|||||||++|||+||+.||...
T Consensus 162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~ 212 (276)
T d1uwha_ 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212 (276)
T ss_dssp ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCC
Confidence 33445789999999998653 4788999999999999999999999753
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-39 Score=330.29 Aligned_cols=201 Identities=28% Similarity=0.453 Sum_probs=182.0
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
..|++.++||+|+||.||+|++++++.||+|++++.. ...+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence 4688999999999999999999888899999997644 346789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCccc
Q 047790 741 NGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVST 820 (885)
Q Consensus 741 ~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~~ 820 (885)
+|++.+++......+++..+..++.|+++|++||| +.||+||||||+||+++.++.+||+|||+++.+.........
T Consensus 83 ~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 159 (258)
T d1k2pa_ 83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 159 (258)
T ss_dssp TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred CCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHh---hcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeec
Confidence 99999998876667999999999999999999999 899999999999999999999999999999877654444444
Q ss_pred CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 821 DTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 821 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
...+|..|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~ 205 (258)
T d1k2pa_ 160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 205 (258)
T ss_dssp CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCC
Confidence 5678999999999999999999999999999999998 89998754
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.1e-38 Score=335.69 Aligned_cols=199 Identities=29% Similarity=0.433 Sum_probs=177.3
Q ss_pred eEEeecceecccCCceEEEEEeCC-CCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.+|++.++||+|+||.||+|++.+ ++.||+|+++... ...+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~ 95 (287)
T d1opja_ 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 95 (287)
T ss_dssp GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecc
Confidence 458899999999999999998764 8889999987543 34678999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++|++.+++.. ....+++..+..++.|+++|++||| +++|+||||||+||+++.++.+||+|||+|+.........
T Consensus 96 ~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~ 172 (287)
T d1opja_ 96 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 172 (287)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEE
T ss_pred cCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHH---HCCcccCccccCeEEECCCCcEEEccccceeecCCCCcee
Confidence 99999999875 3456899999999999999999999 8999999999999999999999999999998876544444
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
.....++..|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 173 ~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~ 217 (287)
T d1opja_ 173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217 (287)
T ss_dssp ETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred eccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCC
Confidence 444568889999999999999999999999999999999877764
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-38 Score=331.92 Aligned_cols=199 Identities=24% Similarity=0.311 Sum_probs=177.1
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc------ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG------QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
.+|++.+.||+|+||.||+|++. +|+.||+|++.+... ...+.+.+|++++++++||||+++++++.+++..|
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 89 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 46999999999999999999875 589999999865321 23567999999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC----cEEEeeccCcc
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF----EAKVSDFGLAR 809 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~----~vkl~Dfg~a~ 809 (885)
+||||+++|+|.+++.... .+++..++.++.|++.|++||| +.+|+||||||+||+++.++ .+|++|||.|.
T Consensus 90 iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~ 165 (293)
T d1jksa_ 90 LILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165 (293)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhh---hcceeecccccceEEEecCCCcccceEecchhhhh
Confidence 9999999999999998654 4999999999999999999999 99999999999999998766 49999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||.+.
T Consensus 166 ~~~~~~--~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~ 219 (293)
T d1jksa_ 166 KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 219 (293)
T ss_dssp ECTTSC--BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hcCCCc--cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCC
Confidence 765432 234457899999999999999999999999999999999999999754
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-38 Score=331.86 Aligned_cols=198 Identities=32% Similarity=0.492 Sum_probs=174.2
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEeccc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMV 740 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 740 (885)
..|++.++||+|+||.||+|++++++.||+|+++... ...+.+.+|++++++++||||+++++++. ++..++||||++
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~ 90 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME 90 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCC
Confidence 4689999999999999999999888899999997644 34578999999999999999999999875 456799999999
Q ss_pred CCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 741 NGSLDDWLRNR-AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 741 ~~sL~~~l~~~-~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
+|+|.+++... ...+++..+..++.|+++|++||| +++|+||||||+||++++++.+||+|||+|+...+......
T Consensus 91 ~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~ 167 (272)
T d1qpca_ 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167 (272)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccchhheeeecccceeeccccceEEccCCccccc
Confidence 99999987642 234899999999999999999999 89999999999999999999999999999988765444444
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
....+++.|+|||++.+..++.++|||||||++|||+||..|+.
T Consensus 168 ~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~ 211 (272)
T d1qpca_ 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211 (272)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred cccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCC
Confidence 45678899999999999999999999999999999999766543
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.3e-38 Score=333.33 Aligned_cols=194 Identities=26% Similarity=0.363 Sum_probs=171.1
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+|++.+.||+|+||.||+|++. +++.||+|++...... ..+++.+|++++++++||||+++++++.+++..|+|||
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E 95 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence 4899999999999999999865 5888999998754422 23568899999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
|+++|++..++..+ ..+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||.|.....
T Consensus 96 ~~~~g~l~~~~~~~-~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~---- 167 (309)
T d1u5ra_ 96 YCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---- 167 (309)
T ss_dssp CCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS----
T ss_pred ecCCCchHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEECCCCCEEEeecccccccCC----
Confidence 99999887766543 45999999999999999999999 89999999999999999999999999999986543
Q ss_pred cccCCCCCCccCCcccccC---CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQA---GRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 168 -~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~ 216 (309)
T d1u5ra_ 168 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216 (309)
T ss_dssp -BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred -CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCC
Confidence 234579999999999864 4589999999999999999999999964
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.2e-38 Score=338.40 Aligned_cols=197 Identities=20% Similarity=0.206 Sum_probs=178.1
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
..+|++.+.||+|+||.||+|+++ +|+.||+|++.+.. ....+++.+|+++++.++||||+++++++.+....++|
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence 357999999999999999999875 59999999986532 23456789999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+.+|++.+++.... .+++..++.++.|++.|+.||| +++|+||||||+||+++.++.+||+|||+|+.+...
T Consensus 120 ~e~~~~g~l~~~l~~~~-~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~- 194 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred cccccccchhhhHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc-
Confidence 99999999999998654 4999999999999999999999 999999999999999999999999999999886542
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
.....||+.|+|||++.+..++.++||||+||++|||+||+.||..
T Consensus 195 ---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~ 240 (350)
T d1rdqe_ 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ---cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCC
Confidence 2345799999999999999999999999999999999999999964
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.3e-38 Score=334.13 Aligned_cols=203 Identities=29% Similarity=0.473 Sum_probs=165.8
Q ss_pred eeEEeecceecccCCceEEEEEeCC-CC---eEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPD-QK---TVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~-~~---~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
...|+++++||+|+||.||+|+++. ++ .||+|++.... ....+++.+|++++++++||||+++++++.+++..++
T Consensus 25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~i 104 (299)
T d1jpaa_ 25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI 104 (299)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 3568999999999999999998753 32 58888876543 2334679999999999999999999999999999999
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
||||+++|+|.+++......+++..+..++.|+++|++||| +++|+||||||+||+++.++.+||+|||+|+.....
T Consensus 105 v~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~ 181 (299)
T d1jpaa_ 105 ITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 181 (299)
T ss_dssp EEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHh---hCCCccCccccceEEECCCCcEEECCcccceEccCC
Confidence 99999999999999876667999999999999999999999 899999999999999999999999999999876543
Q ss_pred CCCc----ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 815 ESHV----STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 815 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.... .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 182 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~ 237 (299)
T d1jpaa_ 182 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 237 (299)
T ss_dssp --------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCC
Confidence 2211 122347889999999999999999999999999999998 89998643
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-37 Score=332.38 Aligned_cols=200 Identities=24% Similarity=0.340 Sum_probs=176.0
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHHHHHHHhc-ccCCCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFAAEMETLD-MVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~~E~~~l~-~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
.+|++.+.||+|+||.||+|++. +++.||+|++++.. ....+.+..|..++. .++||||+++++++.+++..|+|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 46999999999999999999876 58899999997532 233456677777765 68999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++|+|.+++.... .+++..+..++.|++.|++||| +++|+||||||+||++++.+.+|++|||.|+......
T Consensus 82 mEy~~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~ 157 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 157 (320)
T ss_dssp EECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EeecCCCcHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCcccceeecCCCceeccccchhhhccccc
Confidence 99999999999998654 4899999999999999999999 8999999999999999999999999999998765432
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~ 206 (320)
T d1xjda_ 158 -AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 206 (320)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCC
Confidence 3334467999999999999999999999999999999999999999753
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-38 Score=328.12 Aligned_cols=200 Identities=24% Similarity=0.422 Sum_probs=172.4
Q ss_pred EEeecc-eecccCCceEEEEEeC---CCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEE
Q 047790 662 IIVFEN-VIGGGGFRTAFKGTMP---DQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 662 ~~~~~~-~lG~G~~g~vy~a~~~---~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 736 (885)
.|.+.+ +||+|+||.||+|.++ ++..||+|+++... ....+++.+|++++++++||||+++++++.. +..|+||
T Consensus 9 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvm 87 (285)
T d1u59a_ 9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 87 (285)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEE
T ss_pred CeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEE
Confidence 366666 4999999999999764 34579999997543 2335679999999999999999999999864 5678999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||+++|+|.+++......+++..+..++.|+++|++||| +++|+||||||+||+++.++.+||+|||+|+.+.....
T Consensus 88 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~ 164 (285)
T d1u59a_ 88 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 164 (285)
T ss_dssp ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCcCchhheeeccCCceeeccchhhhccccccc
Confidence 999999999998766667999999999999999999999 89999999999999999999999999999988765332
Q ss_pred C--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 817 H--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 817 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
. ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~ 216 (285)
T d1u59a_ 165 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 216 (285)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCC
Confidence 2 2234457899999999999999999999999999999998 89999753
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-37 Score=333.38 Aligned_cols=200 Identities=20% Similarity=0.282 Sum_probs=178.1
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+.+|++.+.||+|+||.||+|.+. +++.||+|+++... .....+.+|++++++++||||+++++++.+++..|+||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence 467999999999999999999876 58889999997654 2345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC--CCcEEEeeccCcccccCCCC
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND--YFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~--~~~vkl~Dfg~a~~~~~~~~ 816 (885)
++||+|.+++......+++..++.++.|++.|++||| +.||+||||||+||+++. ...+|++|||.+......
T Consensus 83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~-- 157 (321)
T d1tkia_ 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-- 157 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhccccC--
Confidence 9999999999876667999999999999999999999 999999999999999984 447999999999876542
Q ss_pred CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.......+++.|+|||...+..++.++||||+||++|+|++|+.||...
T Consensus 158 ~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~ 206 (321)
T d1tkia_ 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE 206 (321)
T ss_dssp CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCC
Confidence 2233457899999999999999999999999999999999999999754
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.2e-37 Score=336.39 Aligned_cols=199 Identities=21% Similarity=0.286 Sum_probs=171.9
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc---cccHHHHH---HHHHHhcccCCCCccceeeeeEeCCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT---GQCDREFA---AEMETLDMVKHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~---~~~~~~~~---~E~~~l~~l~~~~i~~~~~~~~~~~~~ 732 (885)
..+|++.++||+|+||.||+|++. +|+.||+|++.+.. ......+. .|+++++.++||||+++++++.+++..
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 356999999999999999999875 58999999986432 12223333 446777788899999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccccc
Q 047790 733 LLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLIS 812 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~ 812 (885)
|+||||++||+|.+++.... .+++..++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||+|+.+.
T Consensus 83 ~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~ 158 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 158 (364)
T ss_dssp EEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSSCEEECCCTTCEECS
T ss_pred EEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHH---HCCccceeeccceeEEcCCCcEEEeeeceeeecC
Confidence 99999999999999998654 4899999999999999999999 9999999999999999999999999999998765
Q ss_pred CCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 813 DCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 813 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.. ......||+.|+|||++.. ..++.++||||+||++|||+||+.||...
T Consensus 159 ~~---~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~ 209 (364)
T d1omwa3 159 KK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 209 (364)
T ss_dssp SS---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred CC---cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCC
Confidence 43 2334579999999999864 57899999999999999999999999753
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.5e-37 Score=324.85 Aligned_cols=202 Identities=24% Similarity=0.378 Sum_probs=168.7
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc---cHHHHHHHHHHhcccCCCCccceeeeeEeCC----e
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---CDREFAAEMETLDMVKHQNLVQLLGYCSVGE----E 731 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----~ 731 (885)
..+|++.+.||+|+||.||+|++. +++.||+|+++..... ...++.+|+++++.++||||+++++++..++ .
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence 356999999999999999999864 5889999999765432 2356889999999999999999999987643 4
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.|+||||++|++|.+++.... .+++..+..++.|+++|++||| ++||+||||||+||+++.++.++++|||.+...
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~ 161 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 161 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred EEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCccccCcccccCccccceeehhhhhhhh
Confidence 789999999999999887654 4899999999999999999999 899999999999999999999999999988765
Q ss_pred cCCC--CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 812 SDCE--SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 812 ~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.... ........||+.|+|||++.+..++.++||||+||++|||+||+.||...
T Consensus 162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 217 (277)
T d1o6ya_ 162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 217 (277)
T ss_dssp C----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCc
Confidence 4322 22334457899999999999999999999999999999999999999753
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-37 Score=325.26 Aligned_cols=199 Identities=31% Similarity=0.476 Sum_probs=168.7
Q ss_pred eeEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
..+|++++.||+|+||.||+|++++++.||+|+++... ...+.+.+|+.++++++||||+++++++. ++..++||||+
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~ 93 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 93 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEec
Confidence 46799999999999999999999888899999997543 44678999999999999999999999985 45678999999
Q ss_pred cCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRN-RAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~-~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++|++..++.. ....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|+.........
T Consensus 94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 170 (285)
T d1fmka3 94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 170 (285)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHh---hhheecccccceEEEECCCCcEEEcccchhhhccCCCcee
Confidence 99999998874 3345899999999999999999999 8999999999999999999999999999998776544444
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
.....+++.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 171 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~ 215 (285)
T d1fmka3 171 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 215 (285)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred eccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCC
Confidence 445678999999999999999999999999999999999766654
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.1e-37 Score=322.29 Aligned_cols=199 Identities=27% Similarity=0.344 Sum_probs=175.2
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc---------cHHHHHHHHHHhcccC-CCCccceeeeeEeC
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ---------CDREFAAEMETLDMVK-HQNLVQLLGYCSVG 729 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~---------~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~ 729 (885)
.+|++.+.||+|+||.||+|++. +++.||+|++.+.... ..+++.+|++++++++ ||||+++++++.++
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 47999999999999999999874 6889999998754321 1245889999999997 99999999999999
Q ss_pred CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
+..|+||||+++|+|.+++..+. .+++..+..++.|+++|++||| ++||+||||||+||+++.++.+||+|||.+.
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC 158 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred cceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HcCCcccccccceEEEcCCCCeEEccchhee
Confidence 99999999999999999998654 4899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccC------CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQA------GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.+.+.. ......||..|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 159 ~~~~~~--~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~ 218 (277)
T d1phka_ 159 QLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 218 (277)
T ss_dssp ECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EccCCC--ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCC
Confidence 876532 2344679999999998753 45788999999999999999999999754
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-37 Score=333.91 Aligned_cols=202 Identities=27% Similarity=0.466 Sum_probs=171.9
Q ss_pred eEEeecceecccCCceEEEEEeCC-C-----CeEEEEEecccc-cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-Q-----KTVAVKKLSQAT-GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~-----~~valK~~~~~~-~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
.+|++.++||+|+||.||+|++.. + ..||+|++.... ......+.+|+++++++ +||||+++++++.+.+..
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 116 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence 468999999999999999998643 2 358999886543 33456788999999998 899999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcC----------------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCC
Q 047790 733 LLVYEYMVNGSLDDWLRNRA----------------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTS 790 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~----------------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~ 790 (885)
++||||+++|+|.+++..+. ..+++..+..++.|+++|++||| +++|+||||||+
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH---~~~IiHRDlKp~ 193 (325)
T d1rjba_ 117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAAR 193 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGG
T ss_pred EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCchh
Confidence 99999999999999997543 23788999999999999999999 899999999999
Q ss_pred cEEEcCCCcEEEeeccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 791 NILLNDYFEAKVSDFGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 791 Nil~~~~~~vkl~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
||+++.++.+||+|||+|+........ ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+.
T Consensus 194 Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~ 270 (325)
T d1rjba_ 194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 270 (325)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCC
Confidence 999999999999999999876543322 2234457999999999999999999999999999999998 89999753
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-37 Score=322.57 Aligned_cols=199 Identities=27% Similarity=0.451 Sum_probs=166.6
Q ss_pred EEeecceecccCCceEEEEEeCCC-----CeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 662 IIVFENVIGGGGFRTAFKGTMPDQ-----KTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~~~-----~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
.|+++++||+|+||.||+|.++.. ..||+|++...... ...++.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v 87 (283)
T d1mqba_ 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 87 (283)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEE
Confidence 488899999999999999986542 36999998754332 345788999999999999999999999999999999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+.++++.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|+.+....
T Consensus 88 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~ 164 (283)
T d1mqba_ 88 TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 164 (283)
T ss_dssp EECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred EEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcc---ccccccCccccceEEECCCCeEEEcccchhhcccCCC
Confidence 9999999999988877777999999999999999999999 8999999999999999999999999999998765432
Q ss_pred C--CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 816 S--HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 816 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
. .......+|+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~ 214 (283)
T d1mqba_ 165 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 214 (283)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred ccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCcc
Confidence 2 22233467899999999999999999999999999999999766654
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-37 Score=322.07 Aligned_cols=193 Identities=26% Similarity=0.431 Sum_probs=164.1
Q ss_pred ceecccCCceEEEEEeCC---CCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecccC
Q 047790 667 NVIGGGGFRTAFKGTMPD---QKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~---~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
++||+|+||.||+|.+++ ++.||+|+++.... ...+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 579999999999997643 46799999865432 234679999999999999999999999864 457899999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC--cc
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH--VS 819 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~--~~ 819 (885)
|+|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+|++|||+|+........ ..
T Consensus 92 g~L~~~l~~~-~~l~~~~~~~i~~qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 167 (277)
T d1xbba_ 92 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167 (277)
T ss_dssp EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC-
T ss_pred CcHHHHHhhc-cCCCHHHHHHHHHHHHHHHhhHH---hCCcccCCCcchhhcccccCcccccchhhhhhccccccccccc
Confidence 9999999854 45999999999999999999999 899999999999999999999999999999876543322 22
Q ss_pred cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
....+|+.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 168 ~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~ 213 (277)
T d1xbba_ 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 213 (277)
T ss_dssp ---CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred cccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCC
Confidence 34568899999999999999999999999999999998 8999974
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-37 Score=330.27 Aligned_cols=197 Identities=23% Similarity=0.265 Sum_probs=169.8
Q ss_pred eeEEeec-ceecccCCceEEEEEe-CCCCeEEEEEecccccccHHHHHHHHHHhcc-cCCCCccceeeeeEe----CCee
Q 047790 660 IAIIVFE-NVIGGGGFRTAFKGTM-PDQKTVAVKKLSQATGQCDREFAAEMETLDM-VKHQNLVQLLGYCSV----GEEK 732 (885)
Q Consensus 660 ~~~~~~~-~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~~~~~~~~~~E~~~l~~-l~~~~i~~~~~~~~~----~~~~ 732 (885)
+..|++. +.||+|+||.||+|++ .+++.||+|+++. ...+.+|++++.+ .+||||+++++++.+ +...
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~ 84 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 84 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence 4568776 5699999999999987 4589999999854 3567789998755 479999999999865 4568
Q ss_pred EEEEecccCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEEEeeccCc
Q 047790 733 LLVYEYMVNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAKVSDFGLA 808 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vkl~Dfg~a 808 (885)
|+||||++||+|.+++..+. ..+++..++.++.|++.|++||| ++||+||||||+||+++. .+.+||+|||+|
T Consensus 85 ~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a 161 (335)
T d2ozaa1 85 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 161 (335)
T ss_dssp EEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHH---HcCCcccccccccccccccccccccccccccee
Confidence 99999999999999998643 45899999999999999999999 999999999999999985 457999999999
Q ss_pred ccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 809 RLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
+...... ......||+.|+|||++.+..++.++||||+||++|+|+||+.||.+..
T Consensus 162 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~ 217 (335)
T d2ozaa1 162 KETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 217 (335)
T ss_dssp EECCCCC--CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETT
T ss_pred eeccCCC--ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCC
Confidence 8765432 2344679999999999999999999999999999999999999997543
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-37 Score=321.40 Aligned_cols=201 Identities=25% Similarity=0.389 Sum_probs=163.7
Q ss_pred eEEeecceecccCCceEEEEEeCC----CCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv 735 (885)
.+|++.++||+|+||.||+|++.. +..||+|.++.... ...+.+.+|++++++++||||+++++++. ++..++|
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv 85 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 85 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence 469999999999999999998643 34688888865432 23467899999999999999999999986 5678999
Q ss_pred EecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCC
Q 047790 736 YEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCE 815 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~ 815 (885)
|||+++|++.+++......+++..+..++.|+++|++||| +++|+||||||+||+++.++.+|++|||.|+......
T Consensus 86 ~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~ 162 (273)
T d1mp8a_ 86 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162 (273)
T ss_dssp EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhc---ccCeeccccchhheeecCCCcEEEccchhheeccCCc
Confidence 9999999999998877777999999999999999999999 9999999999999999999999999999998766544
Q ss_pred CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
........+|+.|+|||++.+..++.++|||||||++|||++ |.+||...
T Consensus 163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~ 213 (273)
T d1mp8a_ 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 213 (273)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCC
Confidence 444455568899999999999999999999999999999998 89998754
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-36 Score=320.17 Aligned_cols=200 Identities=24% Similarity=0.294 Sum_probs=171.0
Q ss_pred EEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 662 IIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 662 ~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
+|++.++||+|+||.||+|++. +++.||+|+++.... ....++.+|++++++++||||+++++++.++...|+||||
T Consensus 3 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~ 82 (298)
T d1gz8a_ 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 82 (298)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEee
Confidence 5899999999999999999874 589999999965432 2356789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+.++.+..........+++..++.++.|++.|++||| ++||+||||||+||+++.++.+|++|||.|+...... ..
T Consensus 83 ~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~-~~ 158 (298)
T d1gz8a_ 83 LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 158 (298)
T ss_dssp CSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS-BC
T ss_pred cCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhh---cCCEEccccCchheeecccCcceeccCCcceeccCCc-cc
Confidence 9665444444445566999999999999999999999 9999999999999999999999999999998765432 33
Q ss_pred ccCCCCCCccCCcccccCCC-CCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGR-ANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....+|+.|+|||+..... ++.++|+||+||++|+|++|+.||...
T Consensus 159 ~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~ 206 (298)
T d1gz8a_ 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206 (298)
T ss_dssp TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCC
Confidence 34457999999999877765 478999999999999999999999653
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-37 Score=319.22 Aligned_cols=216 Identities=23% Similarity=0.358 Sum_probs=178.4
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccc------cHHHHHHHHHHhcccC--CCCccceeeeeEeCCe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ------CDREFAAEMETLDMVK--HQNLVQLLGYCSVGEE 731 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~------~~~~~~~E~~~l~~l~--~~~i~~~~~~~~~~~~ 731 (885)
++|+++++||+|+||.||+|++. +++.||+|++.+.... ...++.+|++++++++ ||||+++++++.+++.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 46999999999999999999875 5899999998754311 1234678999999987 8999999999999999
Q ss_pred eEEEEecccC-CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-CCcEEEeeccCcc
Q 047790 732 KLLVYEYMVN-GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-YFEAKVSDFGLAR 809 (885)
Q Consensus 732 ~~lv~e~~~~-~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-~~~vkl~Dfg~a~ 809 (885)
.++||||+.+ +++.+++..+. .+++..++.++.|+++|++||| ++||+||||||+||+++. .+.+||+|||.|+
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~ 159 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGA 159 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccccCcccceEEecCCCeEEECccccce
Confidence 9999999976 57888877544 4999999999999999999999 999999999999999984 5799999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC---------CCCCCCCCHHHHHH
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAGRA-NERGDIYSFGVILLELVTGKQPTGPE---------FEDKDGGNLVDWVL 879 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~P~~~~---------~~~~~~~~l~~~~~ 879 (885)
..... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||... .++.....+.+.+.
T Consensus 160 ~~~~~---~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~~~~~~~~~~~s~~~~~li~ 236 (273)
T d1xwsa_ 160 LLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIR 236 (273)
T ss_dssp ECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHHHHH
T ss_pred ecccc---cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHHhhcccCCCCCCCHHHHHHHH
Confidence 75432 2334579999999999987765 56789999999999999999999742 22333445556666
Q ss_pred HHHh
Q 047790 880 LMMK 883 (885)
Q Consensus 880 ~~~~ 883 (885)
.|+.
T Consensus 237 ~~L~ 240 (273)
T d1xwsa_ 237 WCLA 240 (273)
T ss_dssp HHTC
T ss_pred HHcc
Confidence 6654
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-36 Score=324.20 Aligned_cols=195 Identities=24% Similarity=0.303 Sum_probs=165.3
Q ss_pred cceecccCCceEEEEEeC-CCCeEEEEEecccccc-----cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEecc
Q 047790 666 ENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQ-----CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEYM 739 (885)
Q Consensus 666 ~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 739 (885)
.++||+|+||.||+|++. +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+++..|+||||+
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~ 82 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 82 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence 578999999999999975 5899999998654321 1246889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCcc
Q 047790 740 VNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHVS 819 (885)
Q Consensus 740 ~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~~ 819 (885)
.++++..+.. ....+++..++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||.|+...... ...
T Consensus 83 ~~~~~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~-~~~ 157 (299)
T d1ua2a_ 83 ETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAY 157 (299)
T ss_dssp SEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC-CCC
T ss_pred cchHHhhhhh-cccCCCHHHHHHHHHHHHHHHHHhh---ccceecccCCcceEEecCCCccccccCccccccCCCc-ccc
Confidence 8877666554 4556899999999999999999999 9999999999999999999999999999998765432 233
Q ss_pred cCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 820 TDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 820 ~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
....+|+.|+|||++.+. .++.++||||+||++|||++|..||...
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~ 204 (299)
T d1ua2a_ 158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD 204 (299)
T ss_dssp CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCC
Confidence 345789999999988654 5799999999999999999999998654
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-36 Score=319.98 Aligned_cols=201 Identities=26% Similarity=0.416 Sum_probs=169.4
Q ss_pred eEEeecceecccCCceEEEEEeCC-CC----eEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QK----TVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLL 734 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~----~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~l 734 (885)
.+|++.++||+|+||.||+|.+.. |+ .||+|+++... ....+++.+|++++++++||||+++++++.++ ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 359999999999999999998653 43 58888886533 34567899999999999999999999999864 5678
Q ss_pred EEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCC
Q 047790 735 VYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDC 814 (885)
Q Consensus 735 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~ 814 (885)
++||+.+++|.+.+..+...+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+|+.....
T Consensus 88 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~ 164 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 164 (317)
T ss_dssp EEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTT
T ss_pred EEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHH---HcCcccCcchhhcceeCCCCCeEeeccccceecccc
Confidence 88999999999998877777999999999999999999999 899999999999999999999999999999877543
Q ss_pred CCCc-ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 047790 815 ESHV-STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGPE 865 (885)
Q Consensus 815 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~~ 865 (885)
.... .....+|+.|+|||++.+..++.++|||||||++|||+| |..||...
T Consensus 165 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~ 217 (317)
T d1xkka_ 165 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 217 (317)
T ss_dssp CC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred cccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCC
Confidence 3222 233458999999999999999999999999999999998 78888653
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.8e-35 Score=312.80 Aligned_cols=203 Identities=19% Similarity=0.257 Sum_probs=175.7
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCC-CCccceeeeeEeCCeeEEEE
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKH-QNLVQLLGYCSVGEEKLLVY 736 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~ 736 (885)
++++|+++++||+|+||.||+|++. +++.||+|++.... ....+.+|+++++.++| ++++.+++++..+...++||
T Consensus 3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vm 80 (293)
T d1csna_ 3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 80 (293)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEE
Confidence 3568999999999999999999975 58899999886543 23456788889998876 89999999999999999999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC-----CCcEEEeeccCcccc
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND-----YFEAKVSDFGLARLI 811 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~-----~~~vkl~Dfg~a~~~ 811 (885)
||+ +++|.+++......++...+..++.|++.+++||| ++||+||||||+||+++. .+.+|++|||+|+.+
T Consensus 81 e~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~ 156 (293)
T d1csna_ 81 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 156 (293)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred Eec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence 999 78999999877777999999999999999999999 999999999999999974 567999999999876
Q ss_pred cCCCCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 047790 812 SDCESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFE 867 (885)
Q Consensus 812 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~ 867 (885)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~ 218 (293)
T d1csna_ 157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 218 (293)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS
T ss_pred ccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccc
Confidence 543211 22345699999999999999999999999999999999999999975443
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.2e-35 Score=313.82 Aligned_cols=200 Identities=24% Similarity=0.255 Sum_probs=171.2
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEec
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYEY 738 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 738 (885)
.+|++.++||+|+||.||+|++++++.||+|++.... .....++.+|+.++++++||||+++++++..++..+++|||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 3699999999999999999999999999999997543 23357899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 739 MVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 739 ~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
+.++.+..+.. ..+.+++..++.++.|++.|++||| +.+|+||||||+||+++.++.+|++|||.|.....+. ..
T Consensus 82 ~~~~~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~-~~ 156 (286)
T d1ob3a_ 82 LDQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RK 156 (286)
T ss_dssp CSEEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred ehhhhHHHHHh-hcCCcchhhhHHHHHHHHHHHHHhc---cCcEEecCCCCceeeEcCCCCEEecccccceecccCc-cc
Confidence 97766655554 4566999999999999999999999 8999999999999999999999999999998765432 22
Q ss_pred ccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
.....+++.|+|||.+.+. .++.++||||+||++|||++|+.||...
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~ 204 (286)
T d1ob3a_ 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204 (286)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCC
Confidence 3344688999999998765 5689999999999999999999999653
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.5e-36 Score=308.58 Aligned_cols=194 Identities=29% Similarity=0.452 Sum_probs=162.2
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe-CCeeEEEEecc
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV-GEEKLLVYEYM 739 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~ 739 (885)
.+|++.++||+|+||.||+|++. |+.||+|+++... ..+.+.+|++++++++||||+++++++.+ ++..++||||+
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~ 83 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 83 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence 45889999999999999999984 6789999996543 35779999999999999999999998854 45689999999
Q ss_pred cCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCCc
Q 047790 740 VNGSLDDWLRNRA-ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESHV 818 (885)
Q Consensus 740 ~~~sL~~~l~~~~-~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~~ 818 (885)
++|+|.+++..+. ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+|++|||.++.....
T Consensus 84 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~---- 156 (262)
T d1byga_ 84 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 156 (262)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccc---cCceeccccchHhheecCCCCEeecccccceecCCC----
Confidence 9999999987532 34899999999999999999999 899999999999999999999999999999765432
Q ss_pred ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 819 STDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 819 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.....++..|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 157 ~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~ 203 (262)
T d1byga_ 157 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 203 (262)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCC
Confidence 223457889999999999999999999999999999998 6777764
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-36 Score=310.93 Aligned_cols=200 Identities=26% Similarity=0.389 Sum_probs=163.5
Q ss_pred eEEeecceecccCCceEEEEEeCC----CCeEEEEEecccc---cccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD----QKTVAVKKLSQAT---GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~----~~~valK~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
.+|++.+.||+|+||.||+|++.. ...||+|++.+.. ....+++.+|++++++++||||+++++++.+ ...+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~ 86 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK 86 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence 569999999999999999997532 2368999987543 2234678999999999999999999999965 5678
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
+||||++++++.+++..+...+++..+..++.|++.|++||| +++|+||||||+||+++.++.+|++|||+++....
T Consensus 87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecHHHhccccccceeeccchhhhhccc
Confidence 999999999999988876667999999999999999999999 89999999999999999999999999999988754
Q ss_pred CCCC--cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 814 CESH--VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 814 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.... ......++..|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~ 217 (273)
T d1u46a_ 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 217 (273)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCC
Confidence 3222 2223457789999999999999999999999999999998 8999864
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-35 Score=310.86 Aligned_cols=200 Identities=32% Similarity=0.495 Sum_probs=171.4
Q ss_pred EeecceecccCCceEEEEEeCCC----CeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEe-CCeeEEEE
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQ----KTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSV-GEEKLLVY 736 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~----~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~ 736 (885)
+.+.++||+|+||.||+|++.++ ..||+|+++... ....+++.+|++++++++||||+++++++.. +...++||
T Consensus 29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ 108 (311)
T d1r0pa_ 29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 108 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEE
T ss_pred eccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEE
Confidence 45578999999999999987542 258999987533 3345679999999999999999999999765 56889999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCES 816 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~ 816 (885)
||++++++.+++.......++..+..++.|+++|+.|+| +.+|+||||||+||++++++.+||+|||+++.......
T Consensus 109 E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~ 185 (311)
T d1r0pa_ 109 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 185 (311)
T ss_dssp ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTC
T ss_pred EEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhc---ccCcccCCccHHhEeECCCCCEEEecccchhhcccccc
Confidence 999999999999877777889999999999999999999 89999999999999999999999999999987654322
Q ss_pred C---cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 817 H---VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 817 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
. ......+|+.|+|||.+.+..++.++||||||+++|||+||..||...
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~ 237 (311)
T d1r0pa_ 186 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 237 (311)
T ss_dssp CCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-
T ss_pred ccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCC
Confidence 2 223346889999999999999999999999999999999988887643
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-36 Score=318.02 Aligned_cols=201 Identities=25% Similarity=0.309 Sum_probs=169.4
Q ss_pred eeEEeecceecccCCceEEEEEeC-C-CCeEEEEEeccccc--ccHHHHHHHHHHhccc---CCCCccceeeeeEe----
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-D-QKTVAVKKLSQATG--QCDREFAAEMETLDMV---KHQNLVQLLGYCSV---- 728 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~-~~~valK~~~~~~~--~~~~~~~~E~~~l~~l---~~~~i~~~~~~~~~---- 728 (885)
..+|++.++||+|+||.||+|++. + ++.||+|+++.... .....+.+|+++++.+ +||||+++++++..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~ 85 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 85 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence 357999999999999999999874 4 56789999865432 2233566777777665 79999999998853
Q ss_pred -CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccC
Q 047790 729 -GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGL 807 (885)
Q Consensus 729 -~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~ 807 (885)
....+++|||+.++.+..........+++..++.++.|++.|++||| +.+|+||||||+||+++..+.+|++|||.
T Consensus 86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~kl~dfg~ 162 (305)
T d1blxa_ 86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGL 162 (305)
T ss_dssp SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCccEEEEcCCCCeeecchhh
Confidence 34678999999887776666656667999999999999999999999 99999999999999999999999999999
Q ss_pred cccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 808 ARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 808 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.
T Consensus 163 ~~~~~~~--~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~ 218 (305)
T d1blxa_ 163 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS 218 (305)
T ss_dssp CCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred hhhhccc--ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCC
Confidence 8765432 2334567999999999999999999999999999999999999999754
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.4e-35 Score=313.28 Aligned_cols=201 Identities=29% Similarity=0.504 Sum_probs=172.2
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEecccccc-cHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATGQ-CDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
..|++.+.||+|+||.||+|+++ +++.||+|+++..... ..+++.+|++++++++||||+++++++......+
T Consensus 13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~ 92 (301)
T d1lufa_ 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 92 (301)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence 35899999999999999999864 3568999999754433 3467999999999999999999999999999999
Q ss_pred EEEecccCCCHHHHHhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCC
Q 047790 734 LVYEYMVNGSLDDWLRNRA-----------------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTS 790 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~-----------------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~ 790 (885)
++|||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~ivHrDlKp~ 169 (301)
T d1lufa_ 93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATR 169 (301)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGG
T ss_pred EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc---cCCeEeeEEccc
Confidence 9999999999999986422 23788999999999999999999 999999999999
Q ss_pred cEEEcCCCcEEEeeccCcccccCCC-CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCC-CCCC
Q 047790 791 NILLNDYFEAKVSDFGLARLISDCE-SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQ-PTGP 864 (885)
Q Consensus 791 Nil~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~-P~~~ 864 (885)
||+++.++.+||+|||+|+.+.+.. ........+++.|+|||++.+..++.++|||||||++|||++|.. ||..
T Consensus 170 NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~ 245 (301)
T d1lufa_ 170 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 245 (301)
T ss_dssp GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCC
Confidence 9999999999999999998664432 223334568899999999999999999999999999999999964 5653
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-35 Score=309.53 Aligned_cols=200 Identities=27% Similarity=0.382 Sum_probs=163.8
Q ss_pred eEEeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEeCC----eeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE----EKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~ 736 (885)
..|.+.++||+|+||.||+|+. +|+.||+|+++..... ....+.|+..+.+++||||+++++++.+++ ..|+||
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~-~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-HHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 4588899999999999999986 6789999998654321 223445666667889999999999987643 578999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcc-----CCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHG-----FKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~-----~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
||+++|+|.+++++. .+++..+..++.|++.+++|+|.. .+.+|+||||||+||++++++.+||+|||+++..
T Consensus 81 Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~ 158 (303)
T d1vjya_ 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred ecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccc
Confidence 999999999999864 489999999999999999999932 1369999999999999999999999999999877
Q ss_pred cCCCCC---cccCCCCCCccCCcccccCCC------CCCcchhHHHHHHHHHHHhCCCCCCC
Q 047790 812 SDCESH---VSTDTADTIGYVPSEYGQAGR------ANERGDIYSFGVILLELVTGKQPTGP 864 (885)
Q Consensus 812 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~------~~~~~DvwslGvvl~elltg~~P~~~ 864 (885)
...... ......||+.|+|||++.+.. ++.++|||||||++|||+||..||..
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~ 220 (303)
T d1vjya_ 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220 (303)
T ss_dssp ETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred cCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCc
Confidence 543222 223457899999999987653 56789999999999999999988753
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.1e-34 Score=306.32 Aligned_cols=209 Identities=21% Similarity=0.239 Sum_probs=170.1
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCcc-ceeeeeEeCCeeEEEEe
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLV-QLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~e 737 (885)
+++|++.+.||+|+||.||+|++. +++.||+|++..... ..++..|+++++.++|++++ .+..++.+++..++|||
T Consensus 6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme 83 (299)
T d1ckia_ 6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 83 (299)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence 357999999999999999999874 588999998765432 34578899999999877655 45556677888999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC---CCcEEEeeccCcccccCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND---YFEAKVSDFGLARLISDC 814 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~---~~~vkl~Dfg~a~~~~~~ 814 (885)
|+ ++++.+.+......+++..+..++.|++.|++||| ++||+||||||+||+++. +..++++|||+|+.+...
T Consensus 84 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~ 159 (299)
T d1ckia_ 84 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 159 (299)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCT
T ss_pred Ec-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCcceecccc
Confidence 99 66887777766677999999999999999999999 899999999999999863 456999999999887543
Q ss_pred CCC------cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCH
Q 047790 815 ESH------VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEFEDKDGGNL 874 (885)
Q Consensus 815 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~~~~~~~~l 874 (885)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+
T Consensus 160 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~ 225 (299)
T d1ckia_ 160 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 225 (299)
T ss_dssp TTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------H
T ss_pred ccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHH
Confidence 221 223456999999999999999999999999999999999999999876555444333
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-35 Score=312.05 Aligned_cols=205 Identities=26% Similarity=0.319 Sum_probs=176.8
Q ss_pred eEEeecceecccCCceEEEEEeC----CCCeEEEEEecccc----cccHHHHHHHHHHhcccCC-CCccceeeeeEeCCe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP----DQKTVAVKKLSQAT----GQCDREFAAEMETLDMVKH-QNLVQLLGYCSVGEE 731 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~----~~~~valK~~~~~~----~~~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~~~ 731 (885)
.+|++.+.||+|+||.||+|+.. +|+.||+|++++.. ....+.+.+|++++++++| |||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 56999999999999999999752 37889999986532 2234668899999999977 899999999999999
Q ss_pred eEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccc
Q 047790 732 KLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLI 811 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~ 811 (885)
.+++|||+.+++|.+++..... ..+..+..++.|++.|++|+| +.+|+||||||+||+++.++.+||+|||.|..+
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~~-~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~ 179 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRER-FTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 179 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eeeeeecccccHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHhh---cCCEEeccCCccceeecCCCCEEEeeccchhhh
Confidence 9999999999999999986544 788999999999999999999 899999999999999999999999999999877
Q ss_pred cCCCCCcccCCCCCCccCCcccccCC--CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 047790 812 SDCESHVSTDTADTIGYVPSEYGQAG--RANERGDIYSFGVILLELVTGKQPTGPEFEDK 869 (885)
Q Consensus 812 ~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGvvl~elltg~~P~~~~~~~~ 869 (885)
............+++.|+|||.+.+. .++.++||||+||++|+|++|+.||......+
T Consensus 180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~ 239 (322)
T d1vzoa_ 180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN 239 (322)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC
T ss_pred cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 65444445556799999999998764 46889999999999999999999997654443
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-34 Score=307.26 Aligned_cols=201 Identities=29% Similarity=0.464 Sum_probs=169.2
Q ss_pred eEEeecceecccCCceEEEEEeCC--------CCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCC
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD--------QKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGE 730 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~--------~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~ 730 (885)
.+|+++++||+|+||.||+|+... +..||+|++++... .....+.+|...+.++ +||||+++++++.+++
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~ 92 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 92 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence 469999999999999999997533 24699999976543 2346788899999888 7999999999999999
Q ss_pred eeEEEEecccCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRA---------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~ 795 (885)
..++||||+++|++.+++..+. ..+++..+..++.|++.|++||| +.+|+||||||+||+++
T Consensus 93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp~NiLl~ 169 (299)
T d1fgka_ 93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT 169 (299)
T ss_dssp SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh---hCCEEeeeecccceeec
Confidence 9999999999999999997543 34899999999999999999999 99999999999999999
Q ss_pred CCCcEEEeeccCcccccCCC-CCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 796 DYFEAKVSDFGLARLISDCE-SHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 796 ~~~~vkl~Dfg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
.++.+||+|||.+....... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 170 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~ 240 (299)
T d1fgka_ 170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 240 (299)
T ss_dssp TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCC
Confidence 99999999999998775432 223445678899999999999999999999999999999998 6888753
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-34 Score=307.47 Aligned_cols=201 Identities=27% Similarity=0.393 Sum_probs=160.4
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeC-Ce
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVG-EE 731 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~-~~ 731 (885)
.+|++.++||+|+||.||+|++. +++.||+|+++.... ...+.+.+|.+++.++ +|++|+.+++++..+ ..
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~ 92 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 92 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCe
Confidence 46999999999999999999854 246799999875432 3345677888888777 578999999987654 56
Q ss_pred eEEEEecccCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcC
Q 047790 732 KLLVYEYMVNGSLDDWLRNR---------------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLND 796 (885)
Q Consensus 732 ~~lv~e~~~~~sL~~~l~~~---------------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~ 796 (885)
.++||||+++|+|.+++... ...+++..+..++.|+++|++||| +++|+||||||+||+++.
T Consensus 93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~ivHrDlKp~NILl~~ 169 (299)
T d1ywna1 93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSE 169 (299)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECG
T ss_pred EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH---hCCCcCCcCCccceeECC
Confidence 89999999999999999743 234789999999999999999999 899999999999999999
Q ss_pred CCcEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCC-CCCCC
Q 047790 797 YFEAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGK-QPTGP 864 (885)
Q Consensus 797 ~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~-~P~~~ 864 (885)
++.+||+|||+|+....... .......||+.|+|||++.+..++.++|||||||++|||+||. .||..
T Consensus 170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~ 239 (299)
T d1ywna1 170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 239 (299)
T ss_dssp GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCC
Confidence 99999999999987654322 2334457899999999999999999999999999999999975 56654
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-34 Score=307.97 Aligned_cols=198 Identities=30% Similarity=0.469 Sum_probs=167.2
Q ss_pred eEEeecceecccCCceEEEEEeCC-CC--eEEEEEecccc-cccHHHHHHHHHHhccc-CCCCccceeeeeEeCCeeEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMPD-QK--TVAVKKLSQAT-GQCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~~-~~--~valK~~~~~~-~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 735 (885)
..|+++++||+|+||.||+|++++ +. +||+|++.... ....+++.+|+++++++ +||||+++++++.+++..++|
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV 89 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 89 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence 568999999999999999998765 33 47788875433 33445799999999998 699999999999999999999
Q ss_pred EecccCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcE
Q 047790 736 YEYMVNGSLDDWLRNR---------------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEA 800 (885)
Q Consensus 736 ~e~~~~~sL~~~l~~~---------------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~v 800 (885)
|||+++|+|.++++.. ...+++..+..++.|++.|++|+| +.+|+||||||+||+++.++.+
T Consensus 90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 166 (309)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh---cCCccccccccceEEEcCCCce
Confidence 9999999999999743 355899999999999999999999 8999999999999999999999
Q ss_pred EEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCC-CCC
Q 047790 801 KVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQ-PTG 863 (885)
Q Consensus 801 kl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~-P~~ 863 (885)
||+|||.|+...... ......+|..|+|||.+.+..++.++|||||||++|||++|.. ||.
T Consensus 167 kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~ 228 (309)
T d1fvra_ 167 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 228 (309)
T ss_dssp EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred EEccccccccccccc--cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCC
Confidence 999999997654321 2233468899999999999999999999999999999999765 564
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-34 Score=309.65 Aligned_cols=201 Identities=30% Similarity=0.483 Sum_probs=173.2
Q ss_pred eEEeecceecccCCceEEEEEe------CCCCeEEEEEeccccc-ccHHHHHHHHHHhccc-CCCCccceeeeeEeCCee
Q 047790 661 AIIVFENVIGGGGFRTAFKGTM------PDQKTVAVKKLSQATG-QCDREFAAEMETLDMV-KHQNLVQLLGYCSVGEEK 732 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~------~~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~ 732 (885)
.+|++.++||+|+||.||+|++ .+++.||+|+++.... .....+.+|+.+++++ +||||+++++++..++..
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~ 102 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence 5689999999999999999975 2467899999976442 3345788999999999 699999999999999999
Q ss_pred EEEEecccCCCHHHHHhhcC-----------------CCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEc
Q 047790 733 LLVYEYMVNGSLDDWLRNRA-----------------ASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLN 795 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~~~~-----------------~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~ 795 (885)
++||||+++|++.+++.... ..+++..+..++.|+++|++||| +++++||||||+||+++
T Consensus 103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp~NIl~~ 179 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLT 179 (311)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccccccccccc
Confidence 99999999999999987532 24889999999999999999999 99999999999999999
Q ss_pred CCCcEEEeeccCcccccCCCC-CcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 047790 796 DYFEAKVSDFGLARLISDCES-HVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVT-GKQPTGP 864 (885)
Q Consensus 796 ~~~~vkl~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~P~~~ 864 (885)
..+.++++|||.++....... .......+|+.|+|||++.+..++.++|||||||++|||+| |.+||..
T Consensus 180 ~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~ 250 (311)
T d1t46a_ 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 250 (311)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCC
Confidence 999999999999987654332 23344568999999999999999999999999999999999 4555543
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-34 Score=309.67 Aligned_cols=202 Identities=23% Similarity=0.312 Sum_probs=167.3
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccc--cccHHHHHHHHHHhcccCCCCccceeeeeEe--------
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQAT--GQCDREFAAEMETLDMVKHQNLVQLLGYCSV-------- 728 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-------- 728 (885)
+++|++.++||+|+||.||+|++. +|+.||+|++.... .....++.+|++++++++||||+++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 467999999999999999999874 68999999986543 3345678899999999999999999998754
Q ss_pred CCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCc
Q 047790 729 GEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLA 808 (885)
Q Consensus 729 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a 808 (885)
+...++||||+.++.+.... .....+++..++.++.|+++|++||| +.||+||||||+||+++.++.+|++|||++
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~-~~~~~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~dfg~~ 164 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 164 (318)
T ss_dssp --CEEEEEECCCEEHHHHHT-CTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCCCccchhh-hcccccccHHHHHHHHHHHHHHHHhc---cCCEEecCcCchheeecCCCcEEeeeccee
Confidence 34579999999776655444 44556899999999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCC---CcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 809 RLISDCES---HVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 809 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..+..... .......+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~ 225 (318)
T d3blha1 165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 225 (318)
T ss_dssp EECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred eecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCC
Confidence 87654221 122334689999999998765 6899999999999999999999999653
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-34 Score=309.02 Aligned_cols=201 Identities=23% Similarity=0.321 Sum_probs=166.1
Q ss_pred eeEEeecceecccCCceEEEEEe-CCCCeEEEEEecccc-cccHHHHHHHHHHhcccCCCCccceeeeeEeCC----eeE
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTM-PDQKTVAVKKLSQAT-GQCDREFAAEMETLDMVKHQNLVQLLGYCSVGE----EKL 733 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~-~~~~~valK~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----~~~ 733 (885)
..+|++.++||+|+||.||+|.+ .+|+.||+|++.+.. ....+++.+|++++++++||||+++++++.... ..+
T Consensus 7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~ 86 (345)
T d1pmea_ 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 86 (345)
T ss_dssp CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence 35799999999999999999986 469999999997543 233467889999999999999999999986543 234
Q ss_pred EEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccC
Q 047790 734 LVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISD 813 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~ 813 (885)
++++|+.+++|.+++..+ .+++..++.++.|++.|++||| ++||+||||||+||++++++.+||+|||.|.....
T Consensus 87 ~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~ 161 (345)
T d1pmea_ 87 YLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 161 (345)
T ss_dssp EEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence 444556689999999754 4899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCC--CcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 814 CES--HVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 814 ~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... .......+++.|+|||++.. ..++.++||||+||++|+|++|+.||...
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~ 216 (345)
T d1pmea_ 162 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 216 (345)
T ss_dssp GGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCC
Confidence 322 22344568999999999855 46789999999999999999999999654
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-33 Score=306.87 Aligned_cols=197 Identities=23% Similarity=0.232 Sum_probs=163.8
Q ss_pred eeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccCCCCccceeeeeEe------CCee
Q 047790 660 IAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNLVQLLGYCSV------GEEK 732 (885)
Q Consensus 660 ~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~ 732 (885)
...|...++||+|+||.||+|++. +++.||+|++..... ...+|++++++++||||+++++++.. ..+.
T Consensus 19 ~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~ 94 (350)
T d1q5ka_ 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 94 (350)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEE
T ss_pred cCCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEE
Confidence 346999999999999999999976 589999999976432 23479999999999999999998854 2357
Q ss_pred EEEEecccCCCHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-cEEEeeccCcc
Q 047790 733 LLVYEYMVNGSLDDWLR--NRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-EAKVSDFGLAR 809 (885)
Q Consensus 733 ~lv~e~~~~~sL~~~l~--~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-~vkl~Dfg~a~ 809 (885)
++||||++++....+.. .....+++..++.++.|++.|++||| ++||+||||||+||+++.++ .+||+|||++.
T Consensus 95 ~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~ 171 (350)
T d1q5ka_ 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171 (350)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTTCE
T ss_pred EEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH---hcCCcccCCCcceEEEecCCCceeEecccchh
Confidence 89999997654433332 24556999999999999999999999 99999999999999999764 89999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQA-GRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
...... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...
T Consensus 172 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~ 226 (350)
T d1q5ka_ 172 QLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226 (350)
T ss_dssp ECCTTS--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred hccCCc--ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCC
Confidence 765432 2334578999999998765 56899999999999999999999999654
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-33 Score=296.63 Aligned_cols=198 Identities=24% Similarity=0.301 Sum_probs=173.4
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeEEEEe
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 737 (885)
.+|++.++||+|+||.||+|++. +++.||+|+++.... ....++.+|+.+++.++||||+++++++.+....++|++
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 46999999999999999999875 588899999865432 235678999999999999999999999999999999999
Q ss_pred cccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcccccCCCCC
Q 047790 738 YMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARLISDCESH 817 (885)
Q Consensus 738 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~~~~~~~~ 817 (885)
++.++++..++.. .+.+++..++.++.|+++|++||| +++|+||||||+||+++.++.+|++|||.|....... .
T Consensus 82 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~-~ 156 (292)
T d1unla_ 82 FCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-R 156 (292)
T ss_dssp CCSEEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC-S
T ss_pred ecccccccccccc-ccccchhHHHHHHHHHHHHHHHhh---cCCEeeecccCcccccccCCceeeeecchhhcccCCC-c
Confidence 9999888887764 455899999999999999999999 8999999999999999999999999999998875432 2
Q ss_pred cccCCCCCCccCCcccccCCC-CCCcchhHHHHHHHHHHHhCCCCCC
Q 047790 818 VSTDTADTIGYVPSEYGQAGR-ANERGDIYSFGVILLELVTGKQPTG 863 (885)
Q Consensus 818 ~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~P~~ 863 (885)
......++..|+|||++.+.. ++.++||||+||++|||++|+.||.
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 203 (292)
T d1unla_ 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSC
T ss_pred cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCC
Confidence 333456788999999887765 6899999999999999999999974
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.4e-34 Score=301.50 Aligned_cols=200 Identities=27% Similarity=0.446 Sum_probs=172.2
Q ss_pred eEEeecceecccCCceEEEEEeC------CCCeEEEEEeccccc-ccHHHHHHHHHHhcccCCCCccceeeeeEeCCeeE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP------DQKTVAVKKLSQATG-QCDREFAAEMETLDMVKHQNLVQLLGYCSVGEEKL 733 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~------~~~~valK~~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 733 (885)
.+|++.++||+|+||.||+|.+. ++..||+|+++.... .....+.+|++++++++||||+++++++..+...+
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 99 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 99 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence 56899999999999999999763 356899999975432 23456889999999999999999999999889999
Q ss_pred EEEecccCCCHHHHHhhc---------CCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEee
Q 047790 734 LVYEYMVNGSLDDWLRNR---------AASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSD 804 (885)
Q Consensus 734 lv~e~~~~~sL~~~l~~~---------~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~D 804 (885)
+||||+++|+|.+++... ....++..+..++.|+++|+.||| +++|+||||||+||+++.++.+||+|
T Consensus 100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~~NiLld~~~~~Kl~D 176 (308)
T d1p4oa_ 100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGD 176 (308)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECC
T ss_pred EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeeceEcCCceeecCCceEEEee
Confidence 999999999999988642 133688999999999999999999 89999999999999999999999999
Q ss_pred ccCcccccCCCCC-cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCC-CCCC
Q 047790 805 FGLARLISDCESH-VSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGK-QPTG 863 (885)
Q Consensus 805 fg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~-~P~~ 863 (885)
||+|+........ ......+++.|+|||.+.+..++.++||||||+++|||+||. .||.
T Consensus 177 FGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~ 237 (308)
T d1p4oa_ 177 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 237 (308)
T ss_dssp TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred cccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCC
Confidence 9999876543222 223345889999999999999999999999999999999985 6664
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-33 Score=307.21 Aligned_cols=197 Identities=27% Similarity=0.358 Sum_probs=165.0
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeCC-----
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVGE----- 730 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----- 730 (885)
+-.+|++.++||+|+||.||+|.+. +|+.||+|+++.... ...+.+.+|++++++++||||+++++++...+
T Consensus 16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~ 95 (346)
T d1cm8a_ 16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 95 (346)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence 4568999999999999999999875 589999999975432 23457889999999999999999999987654
Q ss_pred -eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 731 -EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 731 -~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
+.|+||||+ +.++..+.+.. .+++..++.++.|++.|++||| ++||+||||||+||+++.++.+|++|||.|.
T Consensus 96 ~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~ 169 (346)
T d1cm8a_ 96 TDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR 169 (346)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred ceEEEEEecc-cccHHHHHHhc--cccHHHHHHHHHHHHHHHHHHH---hCCCcccccCcchhhccccccccccccccee
Confidence 569999999 67888877643 4999999999999999999999 9999999999999999999999999999998
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..... .....+|+.|+|||++.+. .++.++||||+||++|+|++|+.||.+.
T Consensus 170 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~ 222 (346)
T d1cm8a_ 170 QADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 222 (346)
T ss_dssp ECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCCc----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCC
Confidence 76432 2345789999999998764 5689999999999999999999999754
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=3.6e-33 Score=300.85 Aligned_cols=193 Identities=18% Similarity=0.250 Sum_probs=167.3
Q ss_pred eEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeC--CeeEEEE
Q 047790 661 AIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVG--EEKLLVY 736 (885)
Q Consensus 661 ~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~--~~~~lv~ 736 (885)
.+|++.++||+|+||.||+|++. +++.||+|+++... .+++.+|++++++++ ||||+++++++... ...++||
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~ 111 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 111 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence 57999999999999999999874 58899999986543 567889999999996 99999999998743 5689999
Q ss_pred ecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC-cEEEeeccCcccccCCC
Q 047790 737 EYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF-EAKVSDFGLARLISDCE 815 (885)
Q Consensus 737 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~-~vkl~Dfg~a~~~~~~~ 815 (885)
||+.+++|..+. +.+++..++.++.|++.||+||| ++||+||||||+||+++.++ .+|++|||.|+...+..
T Consensus 112 e~~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~ 184 (328)
T d3bqca1 112 EHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 184 (328)
T ss_dssp ECCCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC
T ss_pred eecCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHh---hcccccccccccceEEcCCCCeeeecccccceeccCCC
Confidence 999999987653 34899999999999999999999 99999999999999998654 69999999998765432
Q ss_pred CCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 816 SHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 816 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
......+|+.|+|||.+.+. .++.++|+||+||++|||++|+.||...
T Consensus 185 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~ 233 (328)
T d3bqca1 185 --EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 233 (328)
T ss_dssp --CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred --cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCC
Confidence 23445789999999997775 4799999999999999999999999754
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.98 E-value=7.3e-33 Score=296.94 Aligned_cols=258 Identities=27% Similarity=0.406 Sum_probs=218.1
Q ss_pred CceeEEeecCcccc--ccCccccCccccceeeccc-ccccCCCcccccccccccEEEccCCcccccCcccccccccccce
Q 047790 334 PLKVFDLQYNNFTG--VIPVSLWNSENLMEFNAAS-NLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQIL 410 (885)
Q Consensus 334 ~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 410 (885)
.++.|+|++|.++| .+|..+.++++|++|++++ |.+.|.+|..|+++++|++|+|++|++.+..+..+..+.+|+.+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 45667777777766 4677888888888888876 78888888888888888888888888888888888888888888
Q ss_pred ecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCC-CEEeccCccccCCCCCCc
Q 047790 411 KLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNL-TTLNLFGNLLTGSIPPEF 489 (885)
Q Consensus 411 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L-~~L~Ls~N~l~~~~p~~~ 489 (885)
++++|.+.+.+|..+.+++.|+.+++++|.++ +.+|..+..+..+ +.+++++|++++..|..+
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~----------------~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~ 194 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRIS----------------GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTF 194 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCE----------------EECCGGGGCCCTTCCEEECCSSEEEEECCGGG
T ss_pred ccccccccccCchhhccCcccceeeccccccc----------------cccccccccccccccccccccccccccccccc
Confidence 88888888888888888888888888887774 5677878777775 788889999988888888
Q ss_pred ccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCc
Q 047790 490 GDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNL 569 (885)
Q Consensus 490 ~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l 569 (885)
..+..+ .+++++|...|.+ |..+..+++|+.|+++ +|.+++.+ ++++.+
T Consensus 195 ~~l~~~-~l~l~~~~~~~~~----------------~~~~~~~~~l~~l~~~-------------~~~l~~~~-~~~~~~ 243 (313)
T d1ogqa_ 195 ANLNLA-FVDLSRNMLEGDA----------------SVLFGSDKNTQKIHLA-------------KNSLAFDL-GKVGLS 243 (313)
T ss_dssp GGCCCS-EEECCSSEEEECC----------------GGGCCTTSCCSEEECC-------------SSEECCBG-GGCCCC
T ss_pred cccccc-ccccccccccccc----------------cccccccccccccccc-------------cccccccc-cccccc
Confidence 776544 6888888888765 7788889999999999 44555554 468889
Q ss_pred ccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccccccccccccCCccccccccCCcc
Q 047790 570 VQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMGSDC 639 (885)
Q Consensus 570 ~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~~~~c 639 (885)
++|++|+|++|+++|.+|++++++++|++|||++|+|+|.+|..+.+++++.+++.||+.+||.|+| .|
T Consensus 244 ~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~plp-~c 312 (313)
T d1ogqa_ 244 KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp TTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred cccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccccCCCCC-CC
Confidence 9999999999999999999999999999999999999999999889999999999999999999987 46
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.4e-32 Score=299.12 Aligned_cols=198 Identities=28% Similarity=0.298 Sum_probs=160.3
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEe------C
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSV------G 729 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~ 729 (885)
+..+|++.++||+|+||.||+|++. +|+.||+|++..... ....++.+|+.++++++||||+++++++.. .
T Consensus 15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~ 94 (355)
T d2b1pa1 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 94 (355)
T ss_dssp EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccC
Confidence 4578999999999999999999876 599999999975432 234568899999999999999999999853 3
Q ss_pred CeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCcc
Q 047790 730 EEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLAR 809 (885)
Q Consensus 730 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~ 809 (885)
.+.|+||||+.++ +.+.+. ..+++..++.++.|++.|++||| ++||+||||||+||+++.++.++++|||.++
T Consensus 95 ~~~~iv~Ey~~~~-l~~~~~---~~~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df~~~~ 167 (355)
T d2b1pa1 95 QDVYLVMELMDAN-LCQVIQ---MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_dssp CEEEEEEECCSEE-HHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred ceeEEEEeccchH-HHHhhh---cCCCHHHHHHHHHHHHHHHHHhh---hcccccccCCccccccccccceeeechhhhh
Confidence 6789999999664 444443 34899999999999999999999 8999999999999999999999999999987
Q ss_pred cccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 810 LISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
..... .......+|+.|+|||++.+..++.++||||+||++|+|++|+.||.+.
T Consensus 168 ~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~ 221 (355)
T d2b1pa1 168 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_dssp ---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccc--cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCC
Confidence 65532 2334457899999999999999999999999999999999999999643
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1e-32 Score=300.25 Aligned_cols=198 Identities=27% Similarity=0.336 Sum_probs=165.4
Q ss_pred eeeEEeecceecccCCceEEEEEeC-CCCeEEEEEeccccc--ccHHHHHHHHHHhcccCCCCccceeeeeEeC-----C
Q 047790 659 VIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATG--QCDREFAAEMETLDMVKHQNLVQLLGYCSVG-----E 730 (885)
Q Consensus 659 ~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~ 730 (885)
+..+|++.++||+|+||.||+|++. +|+.||+|++.+... ...+++.+|++++++++||||+++++++... .
T Consensus 16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~ 95 (348)
T d2gfsa1 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95 (348)
T ss_dssp EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence 3467999999999999999999864 699999999975432 2345788999999999999999999998532 3
Q ss_pred eeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 731 EKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 731 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..+++|+|+.+|+|.+++.. +.+++..++.++.|++.|++||| ++||+||||||+||+++.++.+|++|||.+..
T Consensus 96 ~~~~i~~~~~gg~L~~~~~~--~~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~ 170 (348)
T d2gfsa1 96 NDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 170 (348)
T ss_dssp CCCEEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC----C
T ss_pred ceEEEEEeecCCchhhhccc--ccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCCccccccccccccccccchhcc
Confidence 34566777789999999864 34999999999999999999999 89999999999999999999999999999876
Q ss_pred ccCCCCCcccCCCCCCccCCcccccCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 047790 811 ISDCESHVSTDTADTIGYVPSEYGQAG-RANERGDIYSFGVILLELVTGKQPTGPE 865 (885)
Q Consensus 811 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~P~~~~ 865 (885)
... ......++..|+|||+..+. .++.++||||+||++|+|++|+.||.+.
T Consensus 171 ~~~----~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~ 222 (348)
T d2gfsa1 171 TDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222 (348)
T ss_dssp CTG----GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCc----ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCC
Confidence 432 23445788999999987765 4689999999999999999999999653
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.97 E-value=4.4e-29 Score=275.64 Aligned_cols=339 Identities=24% Similarity=0.292 Sum_probs=172.2
Q ss_pred ecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCC
Q 047790 94 DLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLN 173 (885)
Q Consensus 94 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 173 (885)
+++.+.+++.+. ...+.+|++|+++++.|+. + +.++.+++|++|+|++|+|++. | .++++++|++|++++|+++
T Consensus 28 ~l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~~l-~-~l~~L~~L~~L~L~~n~i~ 101 (384)
T d2omza2 28 VLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIA 101 (384)
T ss_dssp HTTCSSTTSEEC--HHHHTTCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC
T ss_pred HhCCCCCCCccC--HHHhCCCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCCCC-c-cccCCcccccccccccccc
Confidence 455555554433 2456667777777777763 3 3466777777777777777743 2 2777777777777777776
Q ss_pred ccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccc
Q 047790 174 GTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGR 253 (885)
Q Consensus 174 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~ 253 (885)
+.. .++++++|+.|++++|.++ .++. ......+..+....|.+....+.............. ...
T Consensus 102 ~i~--~l~~l~~L~~L~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------~~~ 166 (384)
T d2omza2 102 DIT--PLANLTNLTGLTLFNNQIT-DIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN----------QVT 166 (384)
T ss_dssp CCG--GGTTCTTCCEEECCSSCCC-CCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEE----------SCC
T ss_pred ccc--ccccccccccccccccccc-cccc--cccccccccccccccccccccccccccccccccccc----------ccc
Confidence 432 2667777777777777776 3332 334556666666666665332222111111111110 001
Q ss_pred cCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC
Q 047790 254 ITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL 333 (885)
Q Consensus 254 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 333 (885)
....+...+.........|... .+..+..+++++.+++++|.+++..+ +...++|++|++++|+++.. +
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~-~------ 235 (384)
T d2omza2 167 DLKPLANLTTLERLDISSNKVS--DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-G------ 235 (384)
T ss_dssp CCGGGTTCTTCCEEECCSSCCC--CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-G------
T ss_pred hhhhhccccccccccccccccc--cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc-c------
Confidence 1122233334444444444433 23334445555555555555555443 23345555555555554421 1
Q ss_pred CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecc
Q 047790 334 PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLN 413 (885)
Q Consensus 334 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 413 (885)
.+..+++|+.+++++|.+++..+ +..+++|++|++++|++++.. .+..++.++.++++
T Consensus 236 ------------------~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~ 293 (384)
T d2omza2 236 ------------------TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS--PLAGLTALTNLELN 293 (384)
T ss_dssp ------------------GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECC
T ss_pred ------------------hhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCC--cccccccccccccc
Confidence 23333444444444444443322 344455555555555554332 24445555555555
Q ss_pred cccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCccccc
Q 047790 414 SNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSL 493 (885)
Q Consensus 414 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 493 (885)
.|.+++. ..+..+++++.|++++|+++ .++ .+..+++|++|++++|++++ ++ .+.+++
T Consensus 294 ~n~l~~~--~~~~~~~~l~~L~ls~n~l~-----------------~l~-~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~ 351 (384)
T d2omza2 294 ENQLEDI--SPISNLKNLTYLTLYFNNIS-----------------DIS-PVSSLTKLQRLFFANNKVSD-VS-SLANLT 351 (384)
T ss_dssp SSCCSCC--GGGGGCTTCSEEECCSSCCS-----------------CCG-GGGGCTTCCEEECCSSCCCC-CG-GGGGCT
T ss_pred ccccccc--cccchhcccCeEECCCCCCC-----------------CCc-ccccCCCCCEEECCCCCCCC-Ch-hHcCCC
Confidence 5555532 23455555555555555553 111 24455555555555555552 22 355555
Q ss_pred ccceeeeccccceec
Q 047790 494 KVQGLYLGHNQLTGS 508 (885)
Q Consensus 494 ~L~~L~Ls~N~l~g~ 508 (885)
+|++|++++|++++.
T Consensus 352 ~L~~L~l~~N~l~~l 366 (384)
T d2omza2 352 NINWLSAGHNQISDL 366 (384)
T ss_dssp TCCEEECCSSCCCBC
T ss_pred CCCEEECCCCcCCCC
Confidence 555555555555543
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.96 E-value=9e-28 Score=264.97 Aligned_cols=342 Identities=26% Similarity=0.329 Sum_probs=230.2
Q ss_pred cCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCce
Q 047790 85 FNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKS 164 (885)
Q Consensus 85 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 164 (885)
..+.+|++|+++++.++. + +.+..+++|++|+|++|+|++. | .|+++++|++|++++|++++.. .++.+++|+.
T Consensus 41 ~~l~~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~~l-~-~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~ 114 (384)
T d2omza2 41 TDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIADIT--PLANLTNLTG 114 (384)
T ss_dssp HHHTTCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCE
T ss_pred HHhCCCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCCCC-c-cccCCccccccccccccccccc--cccccccccc
Confidence 456789999999999874 3 4688999999999999999954 4 3899999999999999998543 3889999999
Q ss_pred EEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccc
Q 047790 165 LDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGP 244 (885)
Q Consensus 165 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 244 (885)
|++++|.+++..+ ......+..+....|.+. .+....................+ ..+...+.........+
T Consensus 115 L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~- 185 (384)
T d2omza2 115 LTLFNNQITDIDP--LKNLTNLNRLELSSNTIS-DISALSGLTSLQQLSFGNQVTDL-----KPLANLTTLERLDISSN- 185 (384)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEEC-CCGGGTTCTTCSEEEEEESCCCC-----GGGTTCTTCCEEECCSS-
T ss_pred ccccccccccccc--cccccccccccccccccc-ccccccccccccccccccccchh-----hhhcccccccccccccc-
Confidence 9999999985543 445677888888888886 33333222222333332222222 22333333333333221
Q ss_pred ccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCC
Q 047790 245 YQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISG 324 (885)
Q Consensus 245 ~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 324 (885)
..........+++++.+++++|.+++..| +...++|++|++++|.++... .+..+++|+.|++++|++++
T Consensus 186 ------~~~~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~ 255 (384)
T d2omza2 186 ------KVSDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISN 255 (384)
T ss_dssp ------CCCCCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCG--GGGGCTTCSEEECCSSCCCC
T ss_pred ------ccccccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCcc--hhhcccccchhccccCccCC
Confidence 12234456778999999999999997665 456789999999999998753 57888999999999998886
Q ss_pred CCCcccCCC-CceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccc
Q 047790 325 SIPEYISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGN 403 (885)
Q Consensus 325 ~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 403 (885)
..+ +... .|++|++++|++++..+ +..++.++.++++.|++++. ..+..
T Consensus 256 ~~~--~~~~~~L~~L~l~~~~l~~~~~--------------------------~~~~~~l~~l~~~~n~l~~~--~~~~~ 305 (384)
T d2omza2 256 LAP--LSGLTKLTELKLGANQISNISP--------------------------LAGLTALTNLELNENQLEDI--SPISN 305 (384)
T ss_dssp CGG--GTTCTTCSEEECCSSCCCCCGG--------------------------GTTCTTCSEEECCSSCCSCC--GGGGG
T ss_pred CCc--ccccccCCEeeccCcccCCCCc--------------------------cccccccccccccccccccc--cccch
Confidence 433 2222 56666666666654322 34455566666666666542 33556
Q ss_pred cccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccC
Q 047790 404 LTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTG 483 (885)
Q Consensus 404 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 483 (885)
+++++.|++++|+++++.+ +..+++|++|++++|+|+ .++ .+.++++|++|++++|++++
T Consensus 306 ~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~-----------------~l~-~l~~l~~L~~L~l~~N~l~~ 365 (384)
T d2omza2 306 LKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVS-----------------DVS-SLANLTNINWLSAGHNQISD 365 (384)
T ss_dssp CTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCC-----------------CCG-GGGGCTTCCEEECCSSCCCB
T ss_pred hcccCeEECCCCCCCCCcc--cccCCCCCEEECCCCCCC-----------------CCh-hHcCCCCCCEEECCCCcCCC
Confidence 6666666666666665432 566667777777766664 233 46667777777777777775
Q ss_pred CCCCCcccccccceeeeccc
Q 047790 484 SIPPEFGDSLKVQGLYLGHN 503 (885)
Q Consensus 484 ~~p~~~~~l~~L~~L~Ls~N 503 (885)
..| +.++++|+.|+|++|
T Consensus 366 l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 366 LTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CGG--GTTCTTCSEEECCCE
T ss_pred Chh--hccCCCCCEeeCCCC
Confidence 433 666777777777766
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=4.6e-29 Score=272.94 Aligned_cols=205 Identities=22% Similarity=0.244 Sum_probs=161.0
Q ss_pred eceeeeeEEeecceecccCCceEEEEEeC-CCCeEEEEEecccccccHHHHHHHHHHhcccC-----------CCCccce
Q 047790 655 GSVLVIAIIVFENVIGGGGFRTAFKGTMP-DQKTVAVKKLSQATGQCDREFAAEMETLDMVK-----------HQNLVQL 722 (885)
Q Consensus 655 g~~~~~~~~~~~~~lG~G~~g~vy~a~~~-~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-----------~~~i~~~ 722 (885)
|..+..++|++.++||+|+||.||+|++. +|+.||+|++++.... .+.+.+|+++++.++ |+||+++
T Consensus 7 g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~-~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~ 85 (362)
T d1q8ya_ 7 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTKEDSMGANHILKL 85 (362)
T ss_dssp TCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHH-HHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCC
T ss_pred CCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccc-hHHHHHHHHHHHHhcchhhhhhhhcCcCceEEE
Confidence 44444567999999999999999999874 6899999999765322 456778999888775 5789999
Q ss_pred eeeeEe--CCeeEEEEecccCCC-HHH-HHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCC
Q 047790 723 LGYCSV--GEEKLLVYEYMVNGS-LDD-WLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYF 798 (885)
Q Consensus 723 ~~~~~~--~~~~~lv~e~~~~~s-L~~-~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~ 798 (885)
++++.. ....+++|++...+. ... ........+++..+..++.|++.|++|||+ ..||+||||||+||+++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~ 163 (362)
T d1q8ya_ 86 LDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVD 163 (362)
T ss_dssp CEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEE
T ss_pred EEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccC
Confidence 988754 345566666654432 222 233345568999999999999999999993 38999999999999997554
Q ss_pred ------cEEEeeccCcccccCCCCCcccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 047790 799 ------EAKVSDFGLARLISDCESHVSTDTADTIGYVPSEYGQAGRANERGDIYSFGVILLELVTGKQPTGPEF 866 (885)
Q Consensus 799 ------~vkl~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~P~~~~~ 866 (885)
.++++|||.|..... ......+|+.|+|||++....++.++|+||+||++++|++|+.||.+..
T Consensus 164 ~~~~~~~~kl~dfg~s~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~ 233 (362)
T d1q8ya_ 164 SPENLIQIKIADLGNACWYDE----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 233 (362)
T ss_dssp TTTTEEEEEECCCTTCEETTB----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred cccccceeeEeeccccccccc----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCc
Confidence 399999999876432 2344679999999999999999999999999999999999999997643
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.93 E-value=3.1e-25 Score=236.08 Aligned_cols=243 Identities=22% Similarity=0.335 Sum_probs=126.4
Q ss_pred CCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccC
Q 047790 90 LRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSG 169 (885)
Q Consensus 90 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 169 (885)
.+.+|-++++++ .+|+.+. +++++|+|++|+|+...+.+|.++++|++|++++|.++...|..|..+++|++|++++
T Consensus 12 ~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 12 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 88 (305)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccC
Confidence 455566665554 3444442 4566666666666533334555666666666666666655555566666666666666
Q ss_pred CcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccc
Q 047790 170 NGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSL 249 (885)
Q Consensus 170 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~ 249 (885)
|+++ .+|..+ ...++.|++++|.+. .++...+.....++.++...|....
T Consensus 89 n~l~-~l~~~~--~~~l~~L~~~~n~l~-~l~~~~~~~~~~~~~l~~~~n~~~~-------------------------- 138 (305)
T d1xkua_ 89 NQLK-ELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKS-------------------------- 138 (305)
T ss_dssp SCCS-BCCSSC--CTTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCG--------------------------
T ss_pred CccC-cCccch--hhhhhhhhccccchh-hhhhhhhhccccccccccccccccc--------------------------
Confidence 6655 333322 234555555555555 4444444445555555554443321
Q ss_pred cccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcc
Q 047790 250 FVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEY 329 (885)
Q Consensus 250 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 329 (885)
....+..+..+++|+++++++|+++ .+|..+ .++|+.|++++|.++...+..|..++.++.|++++|.+++..+..
T Consensus 139 -~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~ 214 (305)
T d1xkua_ 139 -SGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGS 214 (305)
T ss_dssp -GGBCTTGGGGCTTCCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTT
T ss_pred -cCCCccccccccccCccccccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhhcccccccccccccccccccccc
Confidence 1222334555666777777777666 334332 456666666666666666666666666666666665555444444
Q ss_pred cCCC-CceeEEeecCccccccCccccCccccceeeccccccc
Q 047790 330 ISEL-PLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLE 370 (885)
Q Consensus 330 ~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 370 (885)
+... +|++|+|++|+++. +|.++..+++|++|++++|+|+
T Consensus 215 ~~~l~~L~~L~L~~N~L~~-lp~~l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 215 LANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp GGGSTTCCEEECCSSCCSS-CCTTTTTCSSCCEEECCSSCCC
T ss_pred ccccccceeeecccccccc-cccccccccCCCEEECCCCccC
Confidence 4333 34444444444442 2333444444444444444433
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.93 E-value=5.3e-25 Score=234.30 Aligned_cols=243 Identities=23% Similarity=0.328 Sum_probs=126.3
Q ss_pred CCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCcccccc
Q 047790 113 RLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLS 192 (885)
Q Consensus 113 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 192 (885)
.++.+|-++++++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|++++|++....|..|.++++|++|+++
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 4556666676776 5566553 567777777777774444567777777777777777776666667777777777777
Q ss_pred ccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCC
Q 047790 193 DNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNN 272 (885)
Q Consensus 193 ~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N 272 (885)
+|+++ .+|... ...++.|++++|.+.+
T Consensus 88 ~n~l~-~l~~~~---~~~l~~L~~~~n~l~~------------------------------------------------- 114 (305)
T d1xkua_ 88 KNQLK-ELPEKM---PKTLQELRVHENEITK------------------------------------------------- 114 (305)
T ss_dssp SSCCS-BCCSSC---CTTCCEEECCSSCCCB-------------------------------------------------
T ss_pred CCccC-cCccch---hhhhhhhhccccchhh-------------------------------------------------
Confidence 77776 565442 2345556666665543
Q ss_pred cccccccccccCCCCCcEEEccCCCCc--CcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccC
Q 047790 273 KLSGPIPRELCNSGSLVEINLDGNMLS--GTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIP 350 (885)
Q Consensus 273 ~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p 350 (885)
..+..+.....+..++...|... ...+..|..+++|+.+++++|.+... |... ..+++.|++++|..++..+
T Consensus 115 ----l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l-~~~~-~~~L~~L~l~~n~~~~~~~ 188 (305)
T d1xkua_ 115 ----VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI-PQGL-PPSLTELHLDGNKITKVDA 188 (305)
T ss_dssp ----BCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC-CSSC-CTTCSEEECTTSCCCEECT
T ss_pred ----hhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcccc-Cccc-CCccCEEECCCCcCCCCCh
Confidence 22222222333333333333221 12233455556666666666655532 2211 1134555555555555544
Q ss_pred ccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceeccccccc
Q 047790 351 VSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFD 418 (885)
Q Consensus 351 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 418 (885)
..|..++.++.|++++|.+.+..+..+.++++|++|+|++|+|+. +|.+|..+++|++|+|++|+|+
T Consensus 189 ~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~-lp~~l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 189 ASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp GGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSS-CCTTTTTCSSCCEEECCSSCCC
T ss_pred hHhhccccccccccccccccccccccccccccceeeecccccccc-cccccccccCCCEEECCCCccC
Confidence 444444444444444444444444444444444444444444442 2334444444444444444444
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.8e-25 Score=235.12 Aligned_cols=251 Identities=21% Similarity=0.198 Sum_probs=187.7
Q ss_pred EEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeee-ccCC
Q 047790 70 VIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLR-SNSF 148 (885)
Q Consensus 70 ~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls-~N~l 148 (885)
+.++.+++ .+|..+. +.+++|||++|+|+...+..|.++++|++|++++|++....+..+..++.++.++.+ .|.+
T Consensus 17 ~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~ 93 (284)
T d1ozna_ 17 SCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93 (284)
T ss_dssp ECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred EcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccccc
Confidence 44555565 5666553 568899999999987777789999999999999999988878888888888888765 5667
Q ss_pred CCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCcc
Q 047790 149 TGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPE 228 (885)
Q Consensus 149 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 228 (885)
+...|..|+++++|++|++++|.+....+..+...++|+.+++++|+++ .+|...|+.+++|++|++++|++++..+..
T Consensus 94 ~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~-~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~ 172 (284)
T d1ozna_ 94 RSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERA 172 (284)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCEECTTT
T ss_pred ccccchhhcccccCCEEecCCcccccccccccchhcccchhhhcccccc-ccChhHhccccchhhcccccCcccccchhh
Confidence 7666888899999999999999988777777888889999999999998 777777888888999999998887543333
Q ss_pred ccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccc
Q 047790 229 IGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDR 308 (885)
Q Consensus 229 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 308 (885)
+.++++|+++++++|++++..|..|..+++|++|++++|.+++.++..|..
T Consensus 173 -----------------------------f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~ 223 (284)
T d1ozna_ 173 -----------------------------FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAP 223 (284)
T ss_dssp -----------------------------TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTT
T ss_pred -----------------------------hccccccchhhhhhccccccChhHhhhhhhccccccccccccccccccccc
Confidence 445566777777888888777888888888888888888888888778888
Q ss_pred cCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccc
Q 047790 309 CTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSL 353 (885)
Q Consensus 309 l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~ 353 (885)
+++|++|++++|.+...-+...-...++.+....++++...|..+
T Consensus 224 ~~~L~~L~l~~N~l~C~C~~~~l~~~l~~~~~~~~~~~C~~p~~l 268 (284)
T d1ozna_ 224 LRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRL 268 (284)
T ss_dssp CTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGG
T ss_pred ccccCEEEecCCCCCCCccchHHHHHHHhCcCCCCceEeCCchHH
Confidence 888888888888776432211000023444444455554444443
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=8.5e-25 Score=229.94 Aligned_cols=268 Identities=23% Similarity=0.214 Sum_probs=161.9
Q ss_pred EEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCcc
Q 047790 266 YISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNF 345 (885)
Q Consensus 266 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l 345 (885)
.++.++++++ .+|..+. .++++|+|++|+|+.+++..|.++++|++|++++|++.+..+..+...
T Consensus 15 ~v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~------------ 79 (284)
T d1ozna_ 15 TTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGL------------ 79 (284)
T ss_dssp EEECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC------------
T ss_pred EEEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccc------------
Confidence 4556666666 5565542 456777777777777776677777777777777776665544444333
Q ss_pred ccccCccccCccccceeec-ccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCc
Q 047790 346 TGVIPVSLWNSENLMEFNA-ASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPME 424 (885)
Q Consensus 346 ~~~~p~~~~~l~~L~~L~l-~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 424 (885)
..+..+.. ..|.+....+..|.++++|++|++++|.+....+..+...++|+.+++++|+|+++.+..
T Consensus 80 -----------~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~ 148 (284)
T d1ozna_ 80 -----------ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDT 148 (284)
T ss_dssp -----------TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred -----------ccccccccccccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhH
Confidence 33333332 233344444555666666666666666666555666666666677777777776665666
Q ss_pred cCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeecccc
Q 047790 425 FGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQ 504 (885)
Q Consensus 425 ~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 504 (885)
|..+++|+.|++++|+++ +..+.+|.++++|+.+++++|++++..|..|..+++|+.|++++|+
T Consensus 149 f~~~~~L~~L~l~~N~l~----------------~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 212 (284)
T d1ozna_ 149 FRDLGNLTHLFLHGNRIS----------------SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (284)
T ss_dssp TTTCTTCCEEECCSSCCC----------------EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred hccccchhhcccccCccc----------------ccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccc
Confidence 666667777777666664 2334566667777777777777776667777777777777777777
Q ss_pred ceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCC
Q 047790 505 LTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDG 584 (885)
Q Consensus 505 l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~ 584 (885)
+++.. |..|+.+++|+.|+|++|++. +..+. ..-...++.+....+++..
T Consensus 213 i~~~~----------------~~~~~~~~~L~~L~l~~N~l~-------------C~C~~-~~l~~~l~~~~~~~~~~~C 262 (284)
T d1ozna_ 213 LSALP----------------TEALAPLRALQYLRLNDNPWV-------------CDCRA-RPLWAWLQKFRGSSSEVPC 262 (284)
T ss_dssp CSCCC----------------HHHHTTCTTCCEEECCSSCEE-------------CSGGG-HHHHHHHHHCCSEECCCBE
T ss_pred ccccc----------------ccccccccccCEEEecCCCCC-------------CCccc-hHHHHHHHhCcCCCCceEe
Confidence 66433 456667777777777766543 11110 0112345566666666666
Q ss_pred CCCccccCccccceeecccCcCCC
Q 047790 585 HIPEKLCSLPYLLYLNLADNRLEG 608 (885)
Q Consensus 585 ~ip~~l~~l~~L~~L~l~~N~l~~ 608 (885)
..|..+.+ ....+++.+.|+|
T Consensus 263 ~~p~~l~g---~~l~~l~~~~l~g 283 (284)
T d1ozna_ 263 SLPQRLAG---RDLKRLAANDLQG 283 (284)
T ss_dssp EESGGGTT---CBGGGSCGGGSCC
T ss_pred CCchHHcC---CccccCCHHHCCC
Confidence 66666543 3344455565554
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.7e-24 Score=225.00 Aligned_cols=207 Identities=27% Similarity=0.242 Sum_probs=123.4
Q ss_pred cccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCC
Q 047790 382 ALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKI 461 (885)
Q Consensus 382 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~ 461 (885)
.+.+.+.+++.++. +|..+. +++++|+|++|+|+++.+..|.++++|++|+|++|+|+ .+
T Consensus 11 ~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-----------------~l 70 (266)
T d1p9ag_ 11 SHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-----------------KL 70 (266)
T ss_dssp TCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-----------------EE
T ss_pred CCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-----------------cc
Confidence 34445555555553 344332 34566666666666555555666666666666666554 12
Q ss_pred chhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEcc
Q 047790 462 PGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLS 541 (885)
Q Consensus 462 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls 541 (885)
| .++.+++|++|+|++|+++ ..+..+..+++|+.|++++|++.+.. +..+..+.+++.|+++
T Consensus 71 ~-~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~----------------~~~~~~l~~l~~L~l~ 132 (266)
T d1p9ag_ 71 Q-VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLP----------------LGALRGLGELQELYLK 132 (266)
T ss_dssp E-CCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCC----------------SSTTTTCTTCCEEECT
T ss_pred c-ccccccccccccccccccc-ccccccccccccccccccccccceee----------------cccccccccccccccc
Confidence 2 2344566666666666665 34555666666666666666655322 4455566666666666
Q ss_pred CCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCcccccccc
Q 047790 542 CNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSI 621 (885)
Q Consensus 542 ~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~ 621 (885)
+|.++. ..|..+..+++|++|++++|++++..|..+..+++|++|+|++|+|+..++.......++.
T Consensus 133 ~n~l~~-------------l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~ 199 (266)
T d1p9ag_ 133 GNELKT-------------LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPF 199 (266)
T ss_dssp TSCCCC-------------CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSE
T ss_pred ccccce-------------eccccccccccchhcccccccccccCccccccccccceeecccCCCcccChhHCCCCCCCE
Confidence 554442 2234445566777777777777765555666677777777777777644334445566777
Q ss_pred ccccCCccccccccCCcccccccc
Q 047790 622 ISLTGNKDLCEKIMGSDCQILTFG 645 (885)
Q Consensus 622 ~~~~~N~~~c~~~~~~~c~~~~~~ 645 (885)
+++.||||.| ||++.|+.
T Consensus 200 L~L~~Np~~C------dC~~~~l~ 217 (266)
T d1p9ag_ 200 AFLHGNPWLC------NCEILYFR 217 (266)
T ss_dssp EECCSCCBCC------SGGGHHHH
T ss_pred EEecCCCCCC------CcchHHHH
Confidence 7888889999 89887764
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=3.6e-22 Score=207.21 Aligned_cols=200 Identities=26% Similarity=0.228 Sum_probs=129.0
Q ss_pred CCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeE
Q 047790 260 NCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVF 338 (885)
Q Consensus 260 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L 338 (885)
..+.+.+++.++++++ .+|..+. +++++|+|++|+|+++++..|..+++|++|+|++|+|+.. |. +..+ .|++|
T Consensus 8 ~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~~-~~~l~~L~~L 82 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLGTL 82 (266)
T ss_dssp CSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCCEE
T ss_pred ccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc-cc-cccccccccc
Confidence 4456777888888888 5677663 5788999999999888888888888888888888888732 21 1222 45555
Q ss_pred EeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceeccccccc
Q 047790 339 DLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFD 418 (885)
Q Consensus 339 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 418 (885)
+|++|++++. +..+..+++|+.|++++|.+....+..+..+.+++.|++++|.++
T Consensus 83 ~Ls~N~l~~~-------------------------~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~ 137 (266)
T d1p9ag_ 83 DLSHNQLQSL-------------------------PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137 (266)
T ss_dssp ECCSSCCSSC-------------------------CCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC
T ss_pred cccccccccc-------------------------ccccccccccccccccccccceeeccccccccccccccccccccc
Confidence 5555555432 223445555666666666665555555566666666666666666
Q ss_pred CcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCccccccccee
Q 047790 419 GIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGL 498 (885)
Q Consensus 419 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 498 (885)
.+.+..+..+++|+.|++++|+|+ +..+..|..+++|++|+|++|+|+ .+|+.+..+.+|+.|
T Consensus 138 ~l~~~~~~~l~~l~~l~l~~N~l~----------------~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L 200 (266)
T d1p9ag_ 138 TLPPGLLTPTPKLEKLSLANNNLT----------------ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFA 200 (266)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCS----------------CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEE
T ss_pred eeccccccccccchhccccccccc----------------ccCccccccccccceeecccCCCc-ccChhHCCCCCCCEE
Confidence 555555666666666666666553 233445566666666666666666 566666666666666
Q ss_pred eeccccce
Q 047790 499 YLGHNQLT 506 (885)
Q Consensus 499 ~Ls~N~l~ 506 (885)
+|++|.+.
T Consensus 201 ~L~~Np~~ 208 (266)
T d1p9ag_ 201 FLHGNPWL 208 (266)
T ss_dssp ECCSCCBC
T ss_pred EecCCCCC
Confidence 66666655
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.86 E-value=7.1e-20 Score=198.26 Aligned_cols=303 Identities=24% Similarity=0.277 Sum_probs=157.7
Q ss_pred CCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEcc
Q 047790 89 SLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFS 168 (885)
Q Consensus 89 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 168 (885)
++++|||+++.++ .+|+. +++|++|+|++|+|+ .+|+.+ .+|++|++++|+++ .++.. .+.|++|+++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEECC
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---cccccccccc
Confidence 5778888888886 46643 467888888888888 667654 46777788888777 33321 1357788888
Q ss_pred CCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccc
Q 047790 169 GNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLS 248 (885)
Q Consensus 169 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~ 248 (885)
+|++. .+|. ++.+++|++|++++|.+. ..+.. ...+..+.+.++... .+..+..+
T Consensus 107 ~n~l~-~lp~-~~~l~~L~~L~l~~~~~~-~~~~~----~~~l~~l~~~~~~~~--~~~~l~~l---------------- 161 (353)
T d1jl5a_ 107 NNQLE-KLPE-LQNSSFLKIIDVDNNSLK-KLPDL----PPSLEFIAAGNNQLE--ELPELQNL---------------- 161 (353)
T ss_dssp SSCCS-SCCC-CTTCTTCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCCS--SCCCCTTC----------------
T ss_pred ccccc-cccc-hhhhccceeecccccccc-ccccc----cccccchhhcccccc--cccccccc----------------
Confidence 88877 4553 567777888888777776 33322 345556666555443 22233334
Q ss_pred ccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCc
Q 047790 249 LFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPE 328 (885)
Q Consensus 249 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 328 (885)
+.++.+++++|.+... +.. ....+.+...++.+.... .+..++.|+.+++++|.... .+.
T Consensus 162 -------------~~l~~L~l~~n~~~~~-~~~---~~~~~~l~~~~~~~~~~~--~~~~l~~L~~l~l~~n~~~~-~~~ 221 (353)
T d1jl5a_ 162 -------------PFLTAIYADNNSLKKL-PDL---PLSLESIVAGNNILEELP--ELQNLPFLTTIYADNNLLKT-LPD 221 (353)
T ss_dssp -------------TTCCEEECCSSCCSSC-CCC---CTTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSS-CCS
T ss_pred -------------ccceeccccccccccc-ccc---cccccccccccccccccc--cccccccccccccccccccc-ccc
Confidence 4444555555544421 111 112333444444433221 13345555555555555442 221
Q ss_pred ccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCcccccccccccEEEccCCcccccCccccccccccc
Q 047790 329 YISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQ 408 (885)
Q Consensus 329 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 408 (885)
.. ..+..+.+.++.+..... ....+...++..+.+.+... -.......++..|.+.+. ...+++|+
T Consensus 222 ~~--~~l~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~l~~----l~~~~~~~~~~~~~~~~~----~~~~~~L~ 287 (353)
T d1jl5a_ 222 LP--PSLEALNVRDNYLTDLPE----LPQSLTFLDVSENIFSGLSE----LPPNLYYLNASSNEIRSL----CDLPPSLE 287 (353)
T ss_dssp CC--TTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSEESC----CCTTCCEEECCSSCCSEE----CCCCTTCC
T ss_pred cc--cccccccccccccccccc----cccccccccccccccccccc----ccchhcccccccCccccc----cccCCCCC
Confidence 11 134444555554442211 11233333333333221100 012234455555555432 22345666
Q ss_pred ceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCC
Q 047790 409 ILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPP 487 (885)
Q Consensus 409 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 487 (885)
+|+|++|+|+ .+|.. +++|+.|+|++|+|+ .+|.. +++|+.|++++|+++ .+|+
T Consensus 288 ~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-----------------~l~~~---~~~L~~L~L~~N~L~-~lp~ 341 (353)
T d1jl5a_ 288 ELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-----------------EVPEL---PQNLKQLHVEYNPLR-EFPD 341 (353)
T ss_dssp EEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-----------------CCCCC---CTTCCEEECCSSCCS-SCCC
T ss_pred EEECCCCccC-ccccc---cCCCCEEECCCCcCC-----------------ccccc---cCCCCEEECcCCcCC-CCCc
Confidence 6666666666 34432 345666666666664 33322 345666666666666 4554
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.84 E-value=2.9e-19 Score=193.36 Aligned_cols=303 Identities=26% Similarity=0.324 Sum_probs=185.6
Q ss_pred ccCCcEEEEEEecccccccccccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccE
Q 047790 61 CRHSRVVSLVIQTQSLKGPVSPFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLET 140 (885)
Q Consensus 61 c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 140 (885)
|-..+++.||+++++++ .+|+. +++|++|+|++|+|+ .+|..+ .+|+.|++++|+++ .++.. .+.|++
T Consensus 35 c~~~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~ 102 (353)
T d1jl5a_ 35 CLDRQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEY 102 (353)
T ss_dssp HHHHTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCE
T ss_pred HHHcCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---cccccc
Confidence 33346778999999997 57754 578999999999998 667654 57999999999998 44432 246999
Q ss_pred eeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeeccc
Q 047790 141 ISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNL 220 (885)
Q Consensus 141 L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~ 220 (885)
|++++|.++ .+|. ++.+++|+.|++++|.+.. .|.. ...+..+.+..+... .. ..+..++.++.|++++|.
T Consensus 103 L~L~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~-~~~~---~~~l~~l~~~~~~~~-~~--~~l~~l~~l~~L~l~~n~ 173 (353)
T d1jl5a_ 103 LGVSNNQLE-KLPE-LQNSSFLKIIDVDNNSLKK-LPDL---PPSLEFIAAGNNQLE-EL--PELQNLPFLTAIYADNNS 173 (353)
T ss_dssp EECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SC--CCCTTCTTCCEEECCSSC
T ss_pred ccccccccc-cccc-hhhhccceeeccccccccc-cccc---cccccchhhcccccc-cc--ccccccccceeccccccc
Confidence 999999998 5664 6889999999999999983 3333 456667777777665 22 226788999999999998
Q ss_pred CcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcC
Q 047790 221 LSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSG 300 (885)
Q Consensus 221 l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 300 (885)
+.. ++.... ..+.+....+. . ...+.+..++.|+.+++++|.... ++. ...++..+.+..+.+..
T Consensus 174 ~~~-~~~~~~---~~~~l~~~~~~------~-~~~~~~~~l~~L~~l~l~~n~~~~-~~~---~~~~l~~~~~~~~~~~~ 238 (353)
T d1jl5a_ 174 LKK-LPDLPL---SLESIVAGNNI------L-EELPELQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTD 238 (353)
T ss_dssp CSS-CCCCCT---TCCEEECCSSC------C-SSCCCCTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSC
T ss_pred ccc-cccccc---ccccccccccc------c-cccccccccccccccccccccccc-ccc---ccccccccccccccccc
Confidence 873 222211 11222221110 0 111234455566666666665542 222 22344555555555443
Q ss_pred cccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccceeecccccccCCCccccccc
Q 047790 301 TIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLMEFNAASNLLEGSLSWEISNA 380 (885)
Q Consensus 301 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 380 (885)
... ....+...++.. +.+.+.... .......++..+.+.+. ...+
T Consensus 239 ~~~----~~~~l~~~~~~~-----------------------~~~~~l~~l----~~~~~~~~~~~~~~~~~----~~~~ 283 (353)
T d1jl5a_ 239 LPE----LPQSLTFLDVSE-----------------------NIFSGLSEL----PPNLYYLNASSNEIRSL----CDLP 283 (353)
T ss_dssp CCC----CCTTCCEEECCS-----------------------SCCSEESCC----CTTCCEEECCSSCCSEE----CCCC
T ss_pred ccc----cccccccccccc-----------------------ccccccccc----cchhcccccccCccccc----cccC
Confidence 221 122333333333 333221100 01222333444433322 2234
Q ss_pred ccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCCcccC
Q 047790 381 VALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLN 442 (885)
Q Consensus 381 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 442 (885)
++|++|+|++|+|+ .+|.. +++|+.|+|++|+|+. +|.. +++|++|++++|+|+
T Consensus 284 ~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~~-l~~~---~~~L~~L~L~~N~L~ 337 (353)
T d1jl5a_ 284 PSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLAE-VPEL---PQNLKQLHVEYNPLR 337 (353)
T ss_dssp TTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS
T ss_pred CCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCCc-cccc---cCCCCEEECcCCcCC
Confidence 57888888888887 34543 5678888888888874 5543 457888888888876
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.81 E-value=4.8e-21 Score=187.76 Aligned_cols=165 Identities=12% Similarity=0.070 Sum_probs=120.8
Q ss_pred EeecceecccCCceEEEEEeCCCCeEEEEEecccccc------------------cHHHHHHHHHHhcccCCCCccceee
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQ------------------CDREFAAEMETLDMVKHQNLVQLLG 724 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~------------------~~~~~~~E~~~l~~l~~~~i~~~~~ 724 (885)
+.++++||+|+||.||+|+..+|+.||+|+++..... .......|.+.+.++.|++++..++
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~ 81 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA 81 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred chhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence 5678999999999999999889999999987532110 0123456888999999999988876
Q ss_pred eeEeCCeeEEEEecccCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccCCCCceecCCCCCcEEEcCCCcEEEee
Q 047790 725 YCSVGEEKLLVYEYMVNGSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGFKPYIIHMDIKTSNILLNDYFEAKVSD 804 (885)
Q Consensus 725 ~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~~~~i~H~dlkp~Nil~~~~~~vkl~D 804 (885)
+.. .+++|||+++....+ ++......++.|++.+++||| +.||+||||||+||+++++ .++++|
T Consensus 82 ~~~----~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH---~~giiHrDiKP~NILv~~~-~~~liD 145 (191)
T d1zara2 82 WEG----NAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEE-GIWIID 145 (191)
T ss_dssp EET----TEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETT-EEEECC
T ss_pred ecC----CEEEEEeeccccccc--------hhhHHHHHHHHHHHHHHHHHh---hCCEEEccCChhheeeeCC-CEEEEE
Confidence 632 379999998755422 333456779999999999999 8999999999999999976 489999
Q ss_pred ccCcccccCCCCCcccCCCCCCccCCcc-----cccCCCCCCcchhHHHHHHH
Q 047790 805 FGLARLISDCESHVSTDTADTIGYVPSE-----YGQAGRANERGDIYSFGVIL 852 (885)
Q Consensus 805 fg~a~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~DvwslGvvl 852 (885)
||.|.....+... .|...+ ....+.|..++|+||+.--+
T Consensus 146 FG~a~~~~~~~~~---------~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 146 FPQSVEVGEEGWR---------EILERDVRNIITYFSRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CTTCEETTSTTHH---------HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred CCCcccCCCCCcH---------HHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence 9998765432110 111110 01135677889999986543
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=3.5e-22 Score=224.98 Aligned_cols=238 Identities=17% Similarity=0.136 Sum_probs=122.6
Q ss_pred ccCCCCCcEEEecCCccccccc----ccc-cCCCCCcEEEccCCCCcCcc----cccccccCCcceeeccccccCCC---
Q 047790 258 IGNCSMLKYISLSNNKLSGPIP----REL-CNSGSLVEINLDGNMLSGTI----EDVFDRCTNLSELVLVNNRISGS--- 325 (885)
Q Consensus 258 l~~l~~L~~L~Ls~N~l~~~~p----~~l-~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~--- 325 (885)
+.....++.++++++......- ..+ ........+++..+.+.... ...+...+.++.+++++|++...
T Consensus 165 l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~ 244 (460)
T d1z7xw1 165 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 244 (460)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccccccc
Confidence 3445667777777776653211 111 12235566777777665321 12344567777888877765321
Q ss_pred --CCcccCCC-CceeEEeecCccccccC----ccccCccccceeecccccccCCCcccc-----cccccccEEEccCCcc
Q 047790 326 --IPEYISEL-PLKVFDLQYNNFTGVIP----VSLWNSENLMEFNAASNLLEGSLSWEI-----SNAVALEKLDLSSNML 393 (885)
Q Consensus 326 --~p~~~~~~-~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l 393 (885)
.+...... .++.+++++|.+..... ..+...+.++.+++++|.+.......+ .....|+.+++++|.+
T Consensus 245 ~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l 324 (460)
T d1z7xw1 245 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 324 (460)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred hhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccch
Confidence 11122222 57777777777654322 233445666667777666643222111 1234567777777766
Q ss_pred cccCccccc----ccccccceecccccccCc----CCCccC-CCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchh
Q 047790 394 TRQIPKKIG----NLTNIQILKLNSNFFDGI----IPMEFG-DCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGS 464 (885)
Q Consensus 394 ~~~~p~~~~----~l~~L~~L~Ls~N~l~~~----~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~ 464 (885)
+......+. ..++|++|+|++|+|++. ++..+. ..+.|++|+|++|+|+... -..++..
T Consensus 325 ~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~------------~~~l~~~ 392 (460)
T d1z7xw1 325 TAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS------------CSSLAAT 392 (460)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH------------HHHHHHH
T ss_pred hhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHH------------HHHHHHH
Confidence 654333332 334667777777766532 222222 3455666666666664110 0123445
Q ss_pred cccCCCCCEEeccCccccCCCCCCc----c-cccccceeeecccccee
Q 047790 465 LSRLTNLTTLNLFGNLLTGSIPPEF----G-DSLKVQGLYLGHNQLTG 507 (885)
Q Consensus 465 l~~l~~L~~L~Ls~N~l~~~~p~~~----~-~l~~L~~L~Ls~N~l~g 507 (885)
+...++|++|||++|+|+......+ . +..+|+.|++++|++..
T Consensus 393 l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~ 440 (460)
T d1z7xw1 393 LLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 440 (460)
T ss_dssp HHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred HhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCH
Confidence 5556667777777776653211111 1 12246666666666653
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=8.3e-19 Score=174.35 Aligned_cols=184 Identities=24% Similarity=0.303 Sum_probs=140.1
Q ss_pred cceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcCC
Q 047790 359 LMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGS 438 (885)
Q Consensus 359 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 438 (885)
....++..+.+.+.++. ..+.+|+.|++++|+++... .+..+++|++|+|++|+|+++. .+..+++|++|++++
T Consensus 26 ~i~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~ 99 (210)
T d1h6ta2 26 TIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDE 99 (210)
T ss_dssp HHHHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCS
T ss_pred HHHHHhCcCccCCccCH--HHhcCccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCcc--ccccCcccccccccc
Confidence 33345555555544432 35677888899998887542 4778889999999999988654 367888999999998
Q ss_pred cccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccC
Q 047790 439 NNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSG 518 (885)
Q Consensus 439 N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~ 518 (885)
|+++ .+| .+..+++|+.|++++|.+.. .+.+..+++++.+++++|.+++
T Consensus 100 n~i~-----------------~l~-~l~~l~~L~~L~l~~~~~~~--~~~l~~l~~l~~l~~~~n~l~~----------- 148 (210)
T d1h6ta2 100 NKVK-----------------DLS-SLKDLKKLKSLSLEHNGISD--INGLVHLPQLESLYLGNNKITD----------- 148 (210)
T ss_dssp SCCC-----------------CGG-GGTTCTTCCEEECTTSCCCC--CGGGGGCTTCCEEECCSSCCCC-----------
T ss_pred cccc-----------------ccc-cccccccccccccccccccc--cccccccccccccccccccccc-----------
Confidence 8885 344 47788899999999998863 3457888889999999998873
Q ss_pred CccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccce
Q 047790 519 NKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLY 598 (885)
Q Consensus 519 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~ 598 (885)
+..+..+++|+.+++++|+++ .++ .++++++|++|+|++|+++ .+| .+.++++|++
T Consensus 149 -------~~~~~~l~~L~~l~l~~n~l~--------------~i~-~l~~l~~L~~L~Ls~N~i~-~l~-~l~~l~~L~~ 204 (210)
T d1h6ta2 149 -------ITVLSRLTKLDTLSLEDNQIS--------------DIV-PLAGLTKLQNLYLSKNHIS-DLR-ALAGLKNLDV 204 (210)
T ss_dssp -------CGGGGGCTTCSEEECCSSCCC--------------CCG-GGTTCTTCCEEECCSSCCC-BCG-GGTTCTTCSE
T ss_pred -------ccccccccccccccccccccc--------------ccc-cccCCCCCCEEECCCCCCC-CCh-hhcCCCCCCE
Confidence 345677889999999977665 233 3788999999999999998 566 5889999999
Q ss_pred eeccc
Q 047790 599 LNLAD 603 (885)
Q Consensus 599 L~l~~ 603 (885)
|+|++
T Consensus 205 L~Ls~ 209 (210)
T d1h6ta2 205 LELFS 209 (210)
T ss_dssp EEEEE
T ss_pred EEccC
Confidence 99874
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=1.7e-18 Score=174.68 Aligned_cols=187 Identities=25% Similarity=0.315 Sum_probs=102.7
Q ss_pred CccccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEE
Q 047790 355 NSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTL 434 (885)
Q Consensus 355 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 434 (885)
.+.+|+.|++.+|.|+.. ..+..+++|++|++++|++++..| +..+++|+.+++++|.++.+ ..+.++++|+.+
T Consensus 39 ~l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~i--~~l~~l~~L~~l 112 (227)
T d1h6ua2 39 DLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (227)
T ss_dssp HHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HcCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccccc--cccccccccccc
Confidence 344455555555554432 135555666666666666654322 55566666666666665532 235556666666
Q ss_pred EcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccc
Q 047790 435 DLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLG 514 (885)
Q Consensus 435 ~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 514 (885)
+++++...+ ...+...+.++.+.++++.+... ..+...++|+.|++++|++++
T Consensus 113 ~l~~~~~~~------------------~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~------- 165 (227)
T d1h6ua2 113 DLTSTQITD------------------VTPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSD------- 165 (227)
T ss_dssp ECTTSCCCC------------------CGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCC-------
T ss_pred ccccccccc------------------cchhccccchhhhhchhhhhchh--hhhcccccccccccccccccc-------
Confidence 666555431 12244455566666666665532 224555666666666666552
Q ss_pred cccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCcc
Q 047790 515 YLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLP 594 (885)
Q Consensus 515 ~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~ 594 (885)
...|+++++|+.|+|++|++++ +| .++++++|++|+|++|++++ +| .+.+++
T Consensus 166 -----------~~~l~~l~~L~~L~Ls~n~l~~--------------l~-~l~~l~~L~~L~Ls~N~lt~-i~-~l~~l~ 217 (227)
T d1h6ua2 166 -----------LTPLANLSKLTTLKADDNKISD--------------IS-PLASLPNLIEVHLKNNQISD-VS-PLANTS 217 (227)
T ss_dssp -----------CGGGTTCTTCCEEECCSSCCCC--------------CG-GGGGCTTCCEEECTTSCCCB-CG-GGTTCT
T ss_pred -----------chhhcccccceecccCCCccCC--------------Ch-hhcCCCCCCEEECcCCcCCC-Cc-ccccCC
Confidence 1235566666666666555542 22 25566666777777776663 43 256666
Q ss_pred ccceeecc
Q 047790 595 YLLYLNLA 602 (885)
Q Consensus 595 ~L~~L~l~ 602 (885)
+|++|+++
T Consensus 218 ~L~~L~ls 225 (227)
T d1h6ua2 218 NLFIVTLT 225 (227)
T ss_dssp TCCEEEEE
T ss_pred CCCEEEee
Confidence 66666665
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=9.6e-22 Score=221.35 Aligned_cols=391 Identities=20% Similarity=0.179 Sum_probs=180.1
Q ss_pred cEEEEEEeccccccc-ccccccCCCCCCEEecCCCcccC----cCCcCccCcCCCCEEeccCCcCCCC----CCcccc-c
Q 047790 65 RVVSLVIQTQSLKGP-VSPFLFNLSSLRILDLSKNLLFG----QLSPQVSNLKRLKMLSVGENQLSGS----IPSQLG-L 134 (885)
Q Consensus 65 ~v~~l~l~~~~l~g~-~~~~l~~l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~-~ 134 (885)
.+.+||++++++++. +...+..+++++.|+|++|.++. .+...+..+++|++|||++|+|+.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 466777777777653 23334556777777777777653 2334456677777777777776521 112222 1
Q ss_pred cccccEeeeeccCCCCC----CCccccCCccCceEEccCCcCCccCCccc----C-CCCCCccccccccccCCCCC----
Q 047790 135 LTRLETISLRSNSFTGE----MPSELGDIKQLKSLDFSGNGLNGTIPSRL----G-DLTQLQDLDLSDNLLSGSLP---- 201 (885)
Q Consensus 135 l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~----~-~l~~L~~L~Ls~N~l~~~~p---- 201 (885)
.++|++|+|++|+++.. ++..+..+++|++|+|++|+++......+ . ..............+. ...
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~ 161 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLS-AASCEPL 161 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCB-GGGHHHH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccc-hhhhccc
Confidence 24677777777777643 24455666777777777777653211111 1 1111222222222221 000
Q ss_pred cccccccccccEEEeecccCcccCCc----cc-cCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccc
Q 047790 202 VSLLKNLQSLSYLDVSNNLLSGNIPP----EI-GNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSG 276 (885)
Q Consensus 202 ~~~~~~l~~L~~L~Ls~N~l~~~~p~----~~-~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 276 (885)
...+.....++.++++++......-. .+ ..-.....+.+..+...... .......+...+.++.+++++|++..
T Consensus 162 ~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~-~~~~~~~l~~~~~~~~l~~~~n~~~~ 240 (460)
T d1z7xw1 162 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN-CRDLCGIVASKASLRELALGSNKLGD 240 (460)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH-HHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchh-hhcccccccccccccccchhhccccc
Confidence 01123345666666666655421100 00 01112223333222111000 00111223345566666666665532
Q ss_pred c-----ccccccCCCCCcEEEccCCCCcCcc----cccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCcccc
Q 047790 277 P-----IPRELCNSGSLVEINLDGNMLSGTI----EDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTG 347 (885)
Q Consensus 277 ~-----~p~~l~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~ 347 (885)
. .+........++.+++++|.+.... ...+...+.++.+++++|.++......+.
T Consensus 241 ~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~---------------- 304 (460)
T d1z7xw1 241 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLC---------------- 304 (460)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHH----------------
T ss_pred cccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhh----------------
Confidence 1 2222333455666666666554322 12233455555666665555421111100
Q ss_pred ccCccc-cCccccceeecccccccCCCccc----ccccccccEEEccCCccccc----Cccccc-ccccccceecccccc
Q 047790 348 VIPVSL-WNSENLMEFNAASNLLEGSLSWE----ISNAVALEKLDLSSNMLTRQ----IPKKIG-NLTNIQILKLNSNFF 417 (885)
Q Consensus 348 ~~p~~~-~~l~~L~~L~l~~N~l~~~~~~~----~~~l~~L~~L~Ls~N~l~~~----~p~~~~-~l~~L~~L~Ls~N~l 417 (885)
..+ .....|+.+++++|.+....... +....+|++|+|++|++++. ++..+. ..+.|++|+|++|.|
T Consensus 305 ---~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i 381 (460)
T d1z7xw1 305 ---ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 381 (460)
T ss_dssp ---HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred ---ccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCC
Confidence 000 11224444455544444332222 22334566666666666532 222222 244567777777776
Q ss_pred cCc----CCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcc-cCCCCCEEeccCccccCCCCCC
Q 047790 418 DGI----IPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLS-RLTNLTTLNLFGNLLTGSIPPE 488 (885)
Q Consensus 418 ~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~ 488 (885)
+.. ++..+..+++|++|+|++|+|+.... ..+...+. +...|+.|++++|.+.......
T Consensus 382 ~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~------------~~l~~~l~~~~~~L~~l~l~~~~~~~~~~~~ 445 (460)
T d1z7xw1 382 SDSSCSSLAATLLANHSLRELDLSNNCLGDAGI------------LQLVESVRQPGCLLEQLVLYDIYWSEEMEDR 445 (460)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHH------------HHHHHHHTSTTCCCCEEECTTCCCCHHHHHH
T ss_pred ChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHH------------HHHHHHHHhCCCccCEEECCCCCCCHHHHHH
Confidence 532 33345555667777777776642100 01112222 2235677777777666544443
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=7e-18 Score=172.01 Aligned_cols=220 Identities=16% Similarity=0.129 Sum_probs=120.9
Q ss_pred cEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeec
Q 047790 139 ETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSN 218 (885)
Q Consensus 139 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~ 218 (885)
++++.+++.++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|++++|.+...+|...|.++++++++.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 56777777777 5665543 46777777777777555556777777777777777766556666666666666666553
Q ss_pred -ccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCcccccccc-cccCCCCCcEEEccCC
Q 047790 219 -NLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGPIPR-ELCNSGSLVEINLDGN 296 (885)
Q Consensus 219 -N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~L~~N 296 (885)
|++.... +..+..+++|+++++++|+++...+. .+..+..+..+...++
T Consensus 88 ~n~l~~~~-----------------------------~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~ 138 (242)
T d1xwdc1 88 ANNLLYIN-----------------------------PEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNI 138 (242)
T ss_dssp CTTCCEEC-----------------------------TTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCT
T ss_pred cccccccc-----------------------------cccccccccccccccchhhhccccccccccccccccccccccc
Confidence 3333211 22345556677777777776533221 1222333333444444
Q ss_pred CCcCcccccccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCccccCccccc-eeecccccccCCCcc
Q 047790 297 MLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLWNSENLM-EFNAASNLLEGSLSW 375 (885)
Q Consensus 297 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~ 375 (885)
.+....+..|..++ ..++.|++++|+++...+..+. ..+++ .+.+.+|+++...+.
T Consensus 139 ~l~~i~~~~~~~~~----------------------~~l~~L~l~~n~l~~i~~~~~~-~~~l~~~~~l~~n~l~~l~~~ 195 (242)
T d1xwdc1 139 NIHTIERNSFVGLS----------------------FESVILWLNKNGIQEIHNCAFN-GTQLDELNLSDNNNLEELPND 195 (242)
T ss_dssp TCCEECTTSSTTSB----------------------SSCEEEECCSSCCCEECTTTTT-TCCEEEEECTTCTTCCCCCTT
T ss_pred cccccccccccccc----------------------ccceeeeccccccccccccccc-chhhhccccccccccccccHH
Confidence 44444333333322 1344555555555543333322 22222 223455555555455
Q ss_pred cccccccccEEEccCCcccccCcccccccccccceecc
Q 047790 376 EISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLN 413 (885)
Q Consensus 376 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 413 (885)
.|.++++|++|+|++|+|+...+..|.++++|+.+++.
T Consensus 196 ~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~ 233 (242)
T d1xwdc1 196 VFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY 233 (242)
T ss_dssp TTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEE
T ss_pred HhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCC
Confidence 56666666777777766665555556666666666654
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.75 E-value=2.2e-18 Score=173.84 Aligned_cols=204 Identities=22% Similarity=0.335 Sum_probs=100.4
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
..++++.+.+++.. .+..+++|+.|++++|+|+. ++ .+..+++|++|++++|++++..| +..+++|+++++++|
T Consensus 22 ~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n 95 (227)
T d1h6ua2 22 IKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN 95 (227)
T ss_dssp HHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred HHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--ccccccccccccccc
Confidence 33455555555432 34555666666666666653 32 35666666666666666654322 556666666666666
Q ss_pred cCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccccc
Q 047790 171 GLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLF 250 (885)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 250 (885)
.++. ++ .+.++++|+.+++++|...+ ++. +...+.++.+.++++.+... ..+.++++|+.|+++.|...
T Consensus 96 ~~~~-i~-~l~~l~~L~~l~l~~~~~~~-~~~--~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~---- 164 (227)
T d1h6ua2 96 PLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP--LAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVS---- 164 (227)
T ss_dssp CCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG--GTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCC----
T ss_pred cccc-cc-cccccccccccccccccccc-cch--hccccchhhhhchhhhhchh--hhhccccccccccccccccc----
Confidence 6552 22 35566666666666666552 221 34455566666655555421 11233333333333222110
Q ss_pred ccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeecc
Q 047790 251 VGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLV 318 (885)
Q Consensus 251 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 318 (885)
. ...++++++|++|++++|++++. + .++.+++|++|+|++|+++++.+ +..+++|++|+++
T Consensus 165 --~-~~~l~~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 165 --D-LTPLANLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp --C-CGGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred --c-chhhcccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence 0 01134445555555555555532 1 24445555555555555554432 4455555555544
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.74 E-value=2.1e-18 Score=169.88 Aligned_cols=181 Identities=24% Similarity=0.347 Sum_probs=121.7
Q ss_pred ccceeecccccccCCCcccccccccccEEEccCCcccccCcccccccccccceecccccccCcCCCccCCCCcccEEEcC
Q 047790 358 NLMEFNAASNLLEGSLSWEISNAVALEKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLG 437 (885)
Q Consensus 358 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 437 (885)
+.....++.+.+++..+ ...+.++++|++++|.++.. +.+..+++|++|++++|++++..| +.++++|++|+++
T Consensus 19 ~~i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~ 92 (199)
T d2omxa2 19 EKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMN 92 (199)
T ss_dssp HHHHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred HHHHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCccc--ccCCccccccccc
Confidence 33444555555554432 24566778888888887643 346777888888888888876543 7778888888888
Q ss_pred CcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceecccccccccc
Q 047790 438 SNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLS 517 (885)
Q Consensus 438 ~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls 517 (885)
+|.+. .++ .+.++++|+.|++++|.+... +.+..+++|+.|++++|+++.
T Consensus 93 ~n~~~-----------------~~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~---------- 142 (199)
T d2omxa2 93 NNQIA-----------------DIT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISD---------- 142 (199)
T ss_dssp SSCCC-----------------CCG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC----------
T ss_pred ccccc-----------------ccc-ccccccccccccccccccccc--cccchhhhhHHhhhhhhhhcc----------
Confidence 77764 333 367777888888888777642 346677778888888777752
Q ss_pred CCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccc
Q 047790 518 GNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLL 597 (885)
Q Consensus 518 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~ 597 (885)
...+..+++|+.|++++|+++. ++ .++++++|++|++++|+++ .+| .++++++|+
T Consensus 143 --------~~~l~~~~~L~~L~l~~n~l~~--------------l~-~l~~l~~L~~L~ls~N~i~-~i~-~l~~L~~L~ 197 (199)
T d2omxa2 143 --------ISALSGLTSLQQLNFSSNQVTD--------------LK-PLANLTTLERLDISSNKVS-DIS-VLAKLTNLE 197 (199)
T ss_dssp --------CGGGTTCTTCSEEECCSSCCCC--------------CG-GGTTCTTCCEEECCSSCCC-CCG-GGGGCTTCS
T ss_pred --------cccccccccccccccccccccC--------------Cc-cccCCCCCCEEECCCCCCC-CCc-cccCCCCCC
Confidence 2346677778888887666552 22 3667778888888888877 344 466777776
Q ss_pred ee
Q 047790 598 YL 599 (885)
Q Consensus 598 ~L 599 (885)
+|
T Consensus 198 ~L 199 (199)
T d2omxa2 198 SL 199 (199)
T ss_dssp EE
T ss_pred cC
Confidence 64
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=1.2e-17 Score=170.29 Aligned_cols=216 Identities=14% Similarity=0.144 Sum_probs=136.3
Q ss_pred CEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccC-CcccCCCCCCccccccc
Q 047790 115 KMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTI-PSRLGDLTQLQDLDLSD 193 (885)
Q Consensus 115 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~ 193 (885)
+.++.+++.++ .+|+.+. +++++|+|++|+|+...+..|.++++|++|++++|.+...+ +.+|.++++++++++..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 68899999998 7887663 68999999999999666668999999999999999987654 55789999999999865
Q ss_pred -cccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCC
Q 047790 194 -NLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNN 272 (885)
Q Consensus 194 -N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N 272 (885)
|.+. .++...|.++++|++|++++|+++...+ +..+.. +..+..+..+++
T Consensus 88 ~n~l~-~~~~~~~~~l~~L~~l~l~~~~l~~~~~--~~~~~~--------------------------l~~l~~~~~~n~ 138 (242)
T d1xwdc1 88 ANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPD--VHKIHS--------------------------LQKVLLDIQDNI 138 (242)
T ss_dssp CTTCC-EECTTSEECCTTCCEEEEESCCCCSCCC--CTTTCB--------------------------SSCEEEEEESCT
T ss_pred ccccc-ccccccccccccccccccchhhhccccc--cccccc--------------------------cccccccccccc
Confidence 6776 6777779999999999999999874222 222222 233344444444
Q ss_pred cccccccccccCCC-CCcEEEccCCCCcCcccccccccCCcceeeccccccCCCCCcccCCC-CceeEEeecCccccccC
Q 047790 273 KLSGPIPRELCNSG-SLVEINLDGNMLSGTIEDVFDRCTNLSELVLVNNRISGSIPEYISEL-PLKVFDLQYNNFTGVIP 350 (885)
Q Consensus 273 ~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p 350 (885)
++....+..+..+. .++.|++++|+++.+.+..|.....++.+++++|+++...+..|..+ +|++|++++|+++...+
T Consensus 139 ~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~ 218 (242)
T d1xwdc1 139 NIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPS 218 (242)
T ss_dssp TCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCS
T ss_pred ccccccccccccccccceeeecccccccccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCH
Confidence 55444444444433 56666666666665555444332222223344455543333333333 34444444444443333
Q ss_pred ccccCcccccee
Q 047790 351 VSLWNSENLMEF 362 (885)
Q Consensus 351 ~~~~~l~~L~~L 362 (885)
..|.++++|+.+
T Consensus 219 ~~~~~l~~L~~l 230 (242)
T d1xwdc1 219 YGLENLKKLRAR 230 (242)
T ss_dssp SSCTTCCEEESS
T ss_pred HHHcCCcccccC
Confidence 333333333333
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.73 E-value=5.3e-18 Score=165.89 Aligned_cols=174 Identities=24% Similarity=0.241 Sum_probs=100.8
Q ss_pred cEEEccCCcccccCcccccccccccceecccccccCc-CCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCc
Q 047790 384 EKLDLSSNMLTRQIPKKIGNLTNIQILKLNSNFFDGI-IPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIP 462 (885)
Q Consensus 384 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p 462 (885)
+.++.++|+++ .+|..+. +++++|+|++|+|++. .+..|.++++|+.|+|++|++. +..+
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~----------------~~~~ 71 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT----------------GIEP 71 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCC----------------CBCT
T ss_pred CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccc----------------cccc
Confidence 45666666665 3444432 4566666666666543 3445566666666666666653 3445
Q ss_pred hhcccCCCCCEEeccCccccCCCCCCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccC
Q 047790 463 GSLSRLTNLTTLNLFGNLLTGSIPPEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSC 542 (885)
Q Consensus 463 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 542 (885)
..+..+++|++|+|++|+|+...|..|.++++|+.|+|++|+|++.. |.+|..+++|++|+|++
T Consensus 72 ~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~----------------~~~f~~l~~L~~l~L~~ 135 (192)
T d1w8aa_ 72 NAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVM----------------PGSFEHLNSLTSLNLAS 135 (192)
T ss_dssp TTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEEC----------------TTSSTTCTTCCEEECTT
T ss_pred cccccccccceeeeccccccccCHHHHhCCCcccccccCCccccccC----------------HHHhcCCcccccccccc
Confidence 56666666666777777666655666666777777777777666433 55666667777777776
Q ss_pred CCCCCceeeeecccccccccchhccCcccccccccccccCCCCCCccccCccccceeecccCcCCCC
Q 047790 543 NELDGIVGLYVQSNKFYGEIPPELGNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGE 609 (885)
Q Consensus 543 N~l~~~~~l~~~~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~ 609 (885)
|++... .+ ...-...++.+.+..|.++...|..+. .++.++|+.|.+...
T Consensus 136 N~~~~~-------------~~-~~~~~~~l~~~~l~~~~~~c~~p~~l~---~~~l~~L~~n~l~C~ 185 (192)
T d1w8aa_ 136 NPFNCN-------------CH-LAWFAEWLRKKSLNGGAARCGAPSKVR---DVQIKDLPHSEFKCS 185 (192)
T ss_dssp CCBCCS-------------GG-GHHHHHHHHHHCCSGGGCBBCSSTTTT---TSBGGGSCTTTCCCC
T ss_pred cccccc-------------cc-hHHHhhhhhhhcccCCCeEeCCChhhc---CCEeeecCHhhCcCC
Confidence 555311 11 001122355566666666655565433 344556666666543
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.73 E-value=1.1e-17 Score=166.19 Aligned_cols=183 Identities=22% Similarity=0.293 Sum_probs=119.5
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
...+++.+.+++.++. ..+.+|++|++++|.+++. + .+..+++|++|+|++|++++. + .++.+++|++|++++|
T Consensus 27 i~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n 100 (210)
T d1h6ta2 27 IKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDEN 100 (210)
T ss_dssp HHHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSS
T ss_pred HHHHhCcCccCCccCH--HHhcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCc-c-ccccCccccccccccc
Confidence 3345666666554432 3466777777777777643 2 366777777777777777743 2 3567777777777777
Q ss_pred cCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccccc
Q 047790 171 GLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLF 250 (885)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 250 (885)
+|++ +| .+.++++|+.|++++|.+. .++. +..+++|+.+++++|.+++.
T Consensus 101 ~i~~-l~-~l~~l~~L~~L~l~~~~~~-~~~~--l~~l~~l~~l~~~~n~l~~~-------------------------- 149 (210)
T d1h6ta2 101 KVKD-LS-SLKDLKKLKSLSLEHNGIS-DING--LVHLPQLESLYLGNNKITDI-------------------------- 149 (210)
T ss_dssp CCCC-GG-GGTTCTTCCEEECTTSCCC-CCGG--GGGCTTCCEEECCSSCCCCC--------------------------
T ss_pred cccc-cc-ccccccccccccccccccc-cccc--cccccccccccccccccccc--------------------------
Confidence 7763 33 4667777777777777765 4432 56677777777777766521
Q ss_pred ccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCcceeeccc
Q 047790 251 VGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSELVLVN 319 (885)
Q Consensus 251 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 319 (885)
..+..+++|+++++++|++++.. .+.++++|++|+|++|+|+.+. .+..+++|++|+|++
T Consensus 150 -----~~~~~l~~L~~l~l~~n~l~~i~--~l~~l~~L~~L~Ls~N~i~~l~--~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 150 -----TVLSRLTKLDTLSLEDNQISDIV--PLAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFS 209 (210)
T ss_dssp -----GGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCBCG--GGTTCTTCSEEEEEE
T ss_pred -----ccccccccccccccccccccccc--cccCCCCCCEEECCCCCCCCCh--hhcCCCCCCEEEccC
Confidence 12334567777777888777532 3677778888888888777543 467777787777764
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.72 E-value=8.7e-18 Score=164.37 Aligned_cols=183 Identities=22% Similarity=0.284 Sum_probs=143.8
Q ss_pred ccceecccccccCcCCCccCCCCcccEEEcCCcccCcceeEEEEeecCCcccCCCchhcccCCCCCEEeccCccccCCCC
Q 047790 407 IQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNLNGCVVVVYLLLNNNMLSGKIPGSLSRLTNLTTLNLFGNLLTGSIP 486 (885)
Q Consensus 407 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 486 (885)
.+.++.++|+++ .+|..+. +++++|+|++|+|++. ..+..|.++++|+.|+|++|++++..+
T Consensus 10 ~~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~---------------~~~~~f~~l~~L~~L~L~~N~i~~~~~ 71 (192)
T d1w8aa_ 10 GTTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRI---------------SSDGLFGRLPHLVKLELKRNQLTGIEP 71 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSB---------------CCSCSGGGCTTCCEEECCSSCCCCBCT
T ss_pred CCEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCccc---------------ccccccCCCceEeeeeccccccccccc
Confidence 467899999999 4676553 6899999999988521 335678999999999999999999999
Q ss_pred CCcccccccceeeeccccceeccccccccccCCccCCCCCccccccccCcEEEccCCCCCCceeeeecccccccccchhc
Q 047790 487 PEFGDSLKVQGLYLGHNQLTGSIPESLGYLSGNKLYGSVPTSFGNLNGLTHLDLSCNELDGIVGLYVQSNKFYGEIPPEL 566 (885)
Q Consensus 487 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~l~~~~n~l~g~ip~~~ 566 (885)
..|..+++|+.|+|++|++++.. |.+|.++++|++|+|++|+|++ ..|..|
T Consensus 72 ~~~~~~~~L~~L~Ls~N~l~~l~----------------~~~F~~l~~L~~L~L~~N~l~~-------------i~~~~f 122 (192)
T d1w8aa_ 72 NAFEGASHIQELQLGENKIKEIS----------------NKMFLGLHQLKTLNLYDNQISC-------------VMPGSF 122 (192)
T ss_dssp TTTTTCTTCCEEECCSCCCCEEC----------------SSSSTTCTTCCEEECCSSCCCE-------------ECTTSS
T ss_pred cccccccccceeeeccccccccC----------------HHHHhCCCcccccccCCccccc-------------cCHHHh
Confidence 99999999999999999999543 6789999999999999777663 335678
Q ss_pred cCcccccccccccccCCCCCCccccCccccceeecccCcCCCCCCCCccccccccccccCCccccccccCCcc
Q 047790 567 GNLVQLEYLDFSMNMLDGHIPEKLCSLPYLLYLNLADNRLEGEVPRSGICQNLSIISLTGNKDLCEKIMGSDC 639 (885)
Q Consensus 567 ~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~~~~~~c 639 (885)
..+++|++|+|++|.+....+ ..+-...++.+.+..|.+++..|. .++.+...+++.|...|..+-..+|
T Consensus 123 ~~l~~L~~l~L~~N~~~~~~~-~~~~~~~l~~~~l~~~~~~c~~p~--~l~~~~l~~L~~n~l~C~~~~~~g~ 192 (192)
T d1w8aa_ 123 EHLNSLTSLNLASNPFNCNCH-LAWFAEWLRKKSLNGGAARCGAPS--KVRDVQIKDLPHSEFKCSSENSEGC 192 (192)
T ss_dssp TTCTTCCEEECTTCCBCCSGG-GHHHHHHHHHHCCSGGGCBBCSST--TTTTSBGGGSCTTTCCCCCC---CC
T ss_pred cCCcccccccccccccccccc-hHHHhhhhhhhcccCCCeEeCCCh--hhcCCEeeecCHhhCcCCCCCCCCC
Confidence 899999999999999985433 222234577788889998876664 3566777889999988966554444
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.71 E-value=1.7e-17 Score=163.30 Aligned_cols=179 Identities=26% Similarity=0.388 Sum_probs=110.4
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
..++++.+.+++.++ ...++++++|++++|.++. + +.++.+++|++|+|++|++++..| ++++++|++|++++|
T Consensus 21 i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n 94 (199)
T d2omxa2 21 MKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNN 94 (199)
T ss_dssp HHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCccc--ccCCccccccccccc
Confidence 344556666554332 3456677777777777763 3 236667777777777777764332 667777777777777
Q ss_pred cCCccCCcccCCCCCCccccccccccCCCCCcccccccccccEEEeecccCcccCCccccCCCcccceeccccccccccc
Q 047790 171 GLNGTIPSRLGDLTQLQDLDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLF 250 (885)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 250 (885)
.+.. ++ .+.++++|+.|++++|.+. .++. +..+++|++|++++|++.. +
T Consensus 95 ~~~~-~~-~l~~l~~L~~L~l~~~~~~-~~~~--~~~l~~L~~L~l~~n~l~~-~------------------------- 143 (199)
T d2omxa2 95 QIAD-IT-PLANLTNLTGLTLFNNQIT-DIDP--LKNLTNLNRLELSSNTISD-I------------------------- 143 (199)
T ss_dssp CCCC-CG-GGTTCTTCSEEECCSSCCC-CCGG--GTTCTTCSEEECCSSCCCC-C-------------------------
T ss_pred cccc-cc-ccccccccccccccccccc-cccc--cchhhhhHHhhhhhhhhcc-c-------------------------
Confidence 7663 33 3666777777777777665 3322 5566677777777766541 1
Q ss_pred ccccCccccCCCCCcEEEecCCcccccccccccCCCCCcEEEccCCCCcCcccccccccCCccee
Q 047790 251 VGRITPEIGNCSMLKYISLSNNKLSGPIPRELCNSGSLVEINLDGNMLSGTIEDVFDRCTNLSEL 315 (885)
Q Consensus 251 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 315 (885)
+.+..+++|++|++++|++++.. .+.++++|++|++++|+++++. .++.+++|++|
T Consensus 144 -----~~l~~~~~L~~L~l~~n~l~~l~--~l~~l~~L~~L~ls~N~i~~i~--~l~~L~~L~~L 199 (199)
T d2omxa2 144 -----SALSGLTSLQQLNFSSNQVTDLK--PLANLTTLERLDISSNKVSDIS--VLAKLTNLESL 199 (199)
T ss_dssp -----GGGTTCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCG--GGGGCTTCSEE
T ss_pred -----ccccccccccccccccccccCCc--cccCCCCCCEEECCCCCCCCCc--cccCCCCCCcC
Confidence 12344556677777777776432 3667777777777777776643 36667776654
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.54 E-value=7.6e-15 Score=131.22 Aligned_cols=119 Identities=24% Similarity=0.343 Sum_probs=76.8
Q ss_pred CEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCC
Q 047790 91 RILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 91 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 170 (885)
|+|||++|+++ .++ .++++++|++|++++|+|+ .+|+.|+.+++|++|++++|.|++ +| .++.+++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 46777777776 333 4777777777777777776 566667777777777777777773 33 4677777777777777
Q ss_pred cCCccC-CcccCCCCCCccccccccccCC--CCCcccccccccccEE
Q 047790 171 GLNGTI-PSRLGDLTQLQDLDLSDNLLSG--SLPVSLLKNLQSLSYL 214 (885)
Q Consensus 171 ~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~~l~~L~~L 214 (885)
+|+... ...+..+++|++|++++|++++ .++..+...+++|+.|
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 776432 2456667777777777777652 1233334445555444
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=3e-16 Score=163.34 Aligned_cols=184 Identities=17% Similarity=0.179 Sum_probs=99.8
Q ss_pred cccccEeeeeccCCCCC-CCccccCCccCceEEccCCcCCccCCcccCCCCCCcccccccc-ccCCCCCccccccccccc
Q 047790 135 LTRLETISLRSNSFTGE-MPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN-LLSGSLPVSLLKNLQSLS 212 (885)
Q Consensus 135 l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~~l~~L~ 212 (885)
..+|++|||++|.++.. ++..+..+++|++|+|++|.+++..+..++.+++|++|+++++ .++..--..+..++++|+
T Consensus 45 ~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~ 124 (284)
T d2astb2 45 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 124 (284)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcc
Confidence 34556666665555432 2233455556666666666655555555555566666666653 333110011234456666
Q ss_pred EEEeecc-cCccc-CCccccC-CCcccceecccccccccccccccCccccCCCCCcEEEecCC-cccccccccccCCCCC
Q 047790 213 YLDVSNN-LLSGN-IPPEIGN-LKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNN-KLSGPIPRELCNSGSL 288 (885)
Q Consensus 213 ~L~Ls~N-~l~~~-~p~~~~~-l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N-~l~~~~p~~l~~l~~L 288 (885)
+|+++++ .++.. ++..+.. .++|+.|++++.... .....+.....++++|++|++++| .+++..+..+..+++|
T Consensus 125 ~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~--i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L 202 (284)
T d2astb2 125 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKN--LQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYL 202 (284)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGG--SCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTC
T ss_pred ccccccccccccccchhhhcccccccchhhhcccccc--cccccccccccccccccccccccccCCCchhhhhhcccCcC
Confidence 6666653 23211 1111222 245555555432110 001112223455777888888775 4676677777778888
Q ss_pred cEEEccCC-CCcCcccccccccCCcceeecccc
Q 047790 289 VEINLDGN-MLSGTIEDVFDRCTNLSELVLVNN 320 (885)
Q Consensus 289 ~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N 320 (885)
++|+|++| .+++.....++.+++|+.|+++++
T Consensus 203 ~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 203 QHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp CEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 88888874 566665566777788888887776
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=3.3e-15 Score=140.65 Aligned_cols=111 Identities=23% Similarity=0.269 Sum_probs=61.1
Q ss_pred ccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCc
Q 047790 108 VSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQ 187 (885)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 187 (885)
+.++.+|++|+|++|+|+ .+|..+..+++|++|+|++|+|+. + +.|..+++|++|++++|+++...+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~-l-~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCc-c-CCcccCcchhhhhcccccccCCCccccccccccc
Confidence 344445555555555555 334444555556666666665552 2 2355556666666666666544344445566666
Q ss_pred cccccccccCCCCCc-ccccccccccEEEeecccCc
Q 047790 188 DLDLSDNLLSGSLPV-SLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 188 ~L~Ls~N~l~~~~p~-~~~~~l~~L~~L~Ls~N~l~ 222 (885)
+|++++|+++ .++. ..+..+++|++|++++|+++
T Consensus 91 ~L~L~~N~i~-~~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 91 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred cceecccccc-ccccccccccccccchhhcCCCccc
Confidence 6666666665 3432 33556666666666666664
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=4.1e-15 Score=139.98 Aligned_cols=131 Identities=18% Similarity=0.177 Sum_probs=109.6
Q ss_pred ccccCCCCCCEEecCCCcccCcCCcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCcc
Q 047790 82 PFLFNLSSLRILDLSKNLLFGQLSPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQ 161 (885)
Q Consensus 82 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 161 (885)
+.+.+...+++|||++|+|+. ++..+..+++|+.|+|++|+|+ .++ .|..+++|++|++++|+++...+..+..+++
T Consensus 12 ~~~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~ 88 (162)
T d1a9na_ 12 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPD 88 (162)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred HhccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccc
Confidence 346678899999999999975 5777788999999999999999 454 5889999999999999999655556778999
Q ss_pred CceEEccCCcCCccCC-cccCCCCCCccccccccccCCCCCc---ccccccccccEEEe
Q 047790 162 LKSLDFSGNGLNGTIP-SRLGDLTQLQDLDLSDNLLSGSLPV---SLLKNLQSLSYLDV 216 (885)
Q Consensus 162 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~~l~~L~~L~L 216 (885)
|+.|++++|+|+.... ..+..+++|++|++++|.++ ..|. .++..+++|++||-
T Consensus 89 L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~-~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 89 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred cccceeccccccccccccccccccccchhhcCCCccc-cccchHHHHHHHCCCcCeeCC
Confidence 9999999999984322 46889999999999999998 6663 35677888888873
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.52 E-value=1.3e-14 Score=129.58 Aligned_cols=103 Identities=24% Similarity=0.382 Sum_probs=90.6
Q ss_pred CEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCcccccccc
Q 047790 115 KMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQDLDLSDN 194 (885)
Q Consensus 115 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 194 (885)
++|+|++|+|+ .+| .++.+++|++|++++|+|+ .+|+.++.+++|+.|++++|+|++ +| .+.++++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 58999999998 555 4899999999999999998 678889999999999999999994 44 4899999999999999
Q ss_pred ccCCCCCc-ccccccccccEEEeecccCcc
Q 047790 195 LLSGSLPV-SLLKNLQSLSYLDVSNNLLSG 223 (885)
Q Consensus 195 ~l~~~~p~-~~~~~l~~L~~L~Ls~N~l~~ 223 (885)
+++ .+|. ..+..+++|++|++++|+++.
T Consensus 76 ~i~-~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 76 RLQ-QSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCC-SSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred ccC-CCCCchhhcCCCCCCEEECCCCcCCc
Confidence 998 5553 558889999999999999973
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=6.8e-15 Score=152.95 Aligned_cols=103 Identities=13% Similarity=0.107 Sum_probs=50.5
Q ss_pred ceeeccccccCCCCCcccCCCCceeEEeecCcccccc-CccccCccccceeecccccccCCCcccccccccccEEEccCC
Q 047790 313 SELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVI-PVSLWNSENLMEFNAASNLLEGSLSWEISNAVALEKLDLSSN 391 (885)
Q Consensus 313 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 391 (885)
..+.++...+.......+....|++||++++.++... +..+..+++|++|+++++.++...+..++.+++|++|+++++
T Consensus 26 ~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c 105 (284)
T d2astb2 26 IAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC 105 (284)
T ss_dssp SEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTC
T ss_pred eEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCcccccc
Confidence 3444444444433333333445667777766665332 233445555555555555555444445555555666665553
Q ss_pred -cccccC-cccccccccccceecccc
Q 047790 392 -MLTRQI-PKKIGNLTNIQILKLNSN 415 (885)
Q Consensus 392 -~l~~~~-p~~~~~l~~L~~L~Ls~N 415 (885)
.++... ......+++|++|+++++
T Consensus 106 ~~itd~~l~~l~~~~~~L~~L~ls~c 131 (284)
T d2astb2 106 SGFSEFALQTLLSSCSRLDELNLSWC 131 (284)
T ss_dssp BSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred ccccccccchhhHHHHhccccccccc
Confidence 343211 111234455555555553
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.45 E-value=2.8e-15 Score=161.03 Aligned_cols=243 Identities=20% Similarity=0.210 Sum_probs=137.0
Q ss_pred ccccccCCCCCCEEecCCCcccCc----CCcCccCcCCCCEEeccCCcCCCCC----------CccccccccccEeeeec
Q 047790 80 VSPFLFNLSSLRILDLSKNLLFGQ----LSPQVSNLKRLKMLSVGENQLSGSI----------PSQLGLLTRLETISLRS 145 (885)
Q Consensus 80 ~~~~l~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~----------p~~~~~l~~L~~L~Ls~ 145 (885)
+...+.+.+.|+.|+|++|.+... +...+...++|+.|+++++...... ...+...++|++|+|++
T Consensus 23 l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~ 102 (344)
T d2ca6a1 23 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 102 (344)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccc
Confidence 445677788899999999887543 3445677888999999887654221 12244567888888888
Q ss_pred cCCCCCC----CccccCCccCceEEccCCcCCccCCcc-------------cCCCCCCccccccccccCCCCC---cccc
Q 047790 146 NSFTGEM----PSELGDIKQLKSLDFSGNGLNGTIPSR-------------LGDLTQLQDLDLSDNLLSGSLP---VSLL 205 (885)
Q Consensus 146 N~l~~~~----p~~l~~l~~L~~L~Ls~N~l~~~~p~~-------------~~~l~~L~~L~Ls~N~l~~~~p---~~~~ 205 (885)
|.++... ...+...++|++|++++|.+....... ....+.|+.+++++|.++..-- ...+
T Consensus 103 n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l 182 (344)
T d2ca6a1 103 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 182 (344)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred cccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchh
Confidence 8887542 233445678888888888775211111 1234567777777777652100 1113
Q ss_pred cccccccEEEeecccCcccCCccccCCCcccceecccccccccccccccCccccCCCCCcEEEecCCccccc----cccc
Q 047790 206 KNLQSLSYLDVSNNLLSGNIPPEIGNLKKLSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGP----IPRE 281 (885)
Q Consensus 206 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~----~p~~ 281 (885)
...++|++|++++|+++.... ...+...+..+++|+.|++++|.++.. +...
T Consensus 183 ~~~~~L~~L~L~~n~i~~~g~------------------------~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 238 (344)
T d2ca6a1 183 QSHRLLHTVKMVQNGIRPEGI------------------------EHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 238 (344)
T ss_dssp HHCTTCCEEECCSSCCCHHHH------------------------HHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred hhhhhhccccccccccccccc------------------------ccchhhhhcchhhhccccccccccccccccccccc
Confidence 455677777777777652100 001122234455566666666665432 2234
Q ss_pred ccCCCCCcEEEccCCCCcCccccc----ccc--cCCcceeeccccccCCCC----CcccC-C-CCceeEEeecCccc
Q 047790 282 LCNSGSLVEINLDGNMLSGTIEDV----FDR--CTNLSELVLVNNRISGSI----PEYIS-E-LPLKVFDLQYNNFT 346 (885)
Q Consensus 282 l~~l~~L~~L~L~~N~l~~~~~~~----~~~--l~~L~~L~Ls~N~l~~~~----p~~~~-~-~~L~~L~Ls~N~l~ 346 (885)
+...++|++|+|++|.|++..... +.. .+.|++|++++|+|+... ...+. . ..|++|++++|++.
T Consensus 239 l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 239 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred ccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCC
Confidence 445566666666666665432222 221 245666666666654321 11111 1 24666777777665
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.41 E-value=7.1e-15 Score=157.84 Aligned_cols=247 Identities=17% Similarity=0.153 Sum_probs=121.6
Q ss_pred CcCccCcCCCCEEeccCCcCCCC----CCccccccccccEeeeeccCCCCC---C-------CccccCCccCceEEccCC
Q 047790 105 SPQVSNLKRLKMLSVGENQLSGS----IPSQLGLLTRLETISLRSNSFTGE---M-------PSELGDIKQLKSLDFSGN 170 (885)
Q Consensus 105 ~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~---~-------p~~l~~l~~L~~L~Ls~N 170 (885)
...+...+.|+.|+|++|.|... +...+...++|+.|+++++..... . ...+...++|++|+|++|
T Consensus 24 ~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n 103 (344)
T d2ca6a1 24 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 103 (344)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccc
Confidence 34455567777777777776532 223445566777777766654311 1 122334555666666666
Q ss_pred cCCcc----CCcccCCCCCCccccccccccCCCCCcc------------cccccccccEEEeecccCcccCCccccCCCc
Q 047790 171 GLNGT----IPSRLGDLTQLQDLDLSDNLLSGSLPVS------------LLKNLQSLSYLDVSNNLLSGNIPPEIGNLKK 234 (885)
Q Consensus 171 ~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~------------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 234 (885)
.+... +...+...++|++|++++|.+...-... .....+.|+.|++++|+++.
T Consensus 104 ~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~----------- 172 (344)
T d2ca6a1 104 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN----------- 172 (344)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG-----------
T ss_pred ccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccc-----------
Confidence 65532 1122334455555555555543100000 00122334444444444321
Q ss_pred ccceecccccccccccccccCccccCCCCCcEEEecCCccccc-----ccccccCCCCCcEEEccCCCCcCc----cccc
Q 047790 235 LSDLYLGIGPYQLSLFVGRITPEIGNCSMLKYISLSNNKLSGP-----IPRELCNSGSLVEINLDGNMLSGT----IEDV 305 (885)
Q Consensus 235 L~~L~l~~n~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~-----~p~~l~~l~~L~~L~L~~N~l~~~----~~~~ 305 (885)
.. ...+...+..++.|+.|++++|+++.. +...+...++|+.|+|++|.++.. +...
T Consensus 173 -------------~~-~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 238 (344)
T d2ca6a1 173 -------------GS-MKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 238 (344)
T ss_dssp -------------GG-HHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred -------------cc-cccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccccccc
Confidence 00 111223344556677777777776532 233455566677777777766532 2334
Q ss_pred ccccCCcceeeccccccCCCCCcccCCCCceeEEeecCccccccCcccc--CccccceeecccccccCC----Cccccc-
Q 047790 306 FDRCTNLSELVLVNNRISGSIPEYISELPLKVFDLQYNNFTGVIPVSLW--NSENLMEFNAASNLLEGS----LSWEIS- 378 (885)
Q Consensus 306 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~l~~N~l~~~----~~~~~~- 378 (885)
+..+++|++|+|++|.|++.....+. ..+. ....|++|++++|.|... +...+.
T Consensus 239 l~~~~~L~~L~Ls~n~i~~~g~~~l~-------------------~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~ 299 (344)
T d2ca6a1 239 LKSWPNLRELGLNDCLLSARGAAAVV-------------------DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDE 299 (344)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHH-------------------HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHH
T ss_pred ccccccchhhhhhcCccCchhhHHHH-------------------HHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHc
Confidence 45666666666666666532111110 0111 113344555555544321 112222
Q ss_pred ccccccEEEccCCcccc
Q 047790 379 NAVALEKLDLSSNMLTR 395 (885)
Q Consensus 379 ~l~~L~~L~Ls~N~l~~ 395 (885)
+.+.|++|+|++|++..
T Consensus 300 ~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 300 KMPDLLFLELNGNRFSE 316 (344)
T ss_dssp HCTTCCEEECTTSBSCT
T ss_pred cCCCCCEEECCCCcCCC
Confidence 45678888888888863
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.35 E-value=1.1e-14 Score=142.16 Aligned_cols=41 Identities=24% Similarity=0.370 Sum_probs=17.4
Q ss_pred ccccccccccceecccccccCcCCCccCCCCcccEEEcCCccc
Q 047790 399 KKIGNLTNIQILKLNSNFFDGIIPMEFGDCISLNTLDLGSNNL 441 (885)
Q Consensus 399 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 441 (885)
..+..+++|+.|+|++|+|+.+ + .+..+++|++|+|++|+|
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i 82 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLI 82 (198)
T ss_dssp HHHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEE
T ss_pred hHHhcccccceeECcccCCCCc-c-cccCCccccChhhccccc
Confidence 3444444444444444444422 1 234444444444444443
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.35 E-value=6.7e-15 Score=143.61 Aligned_cols=113 Identities=25% Similarity=0.264 Sum_probs=65.3
Q ss_pred CcCccCcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccCCcccCCCC
Q 047790 105 SPQVSNLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLT 184 (885)
Q Consensus 105 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 184 (885)
+..++.+++|++|+|++|+|+ .++ .+..+++|++|+|++|.|+ .+|..+..+++|+.|++++|+|+.. +.+..++
T Consensus 41 ~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~ 115 (198)
T d1m9la_ 41 DATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL--SGIEKLV 115 (198)
T ss_dssp HHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH--HHHHHHH
T ss_pred hhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-ccccccccccccccccccccccccc--ccccccc
Confidence 344555556666666666665 233 3556666666666666665 3444444445566666666666632 2355566
Q ss_pred CCccccccccccCCCCCc-ccccccccccEEEeecccCcc
Q 047790 185 QLQDLDLSDNLLSGSLPV-SLLKNLQSLSYLDVSNNLLSG 223 (885)
Q Consensus 185 ~L~~L~Ls~N~l~~~~p~-~~~~~l~~L~~L~Ls~N~l~~ 223 (885)
+|++|++++|+++ .++. ..+..+++|++|++++|++..
T Consensus 116 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~L~~N~l~~ 154 (198)
T d1m9la_ 116 NLRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp HSSEEEESEEECC-CHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred cccccccccchhc-cccccccccCCCccceeecCCCcccc
Confidence 6666666666665 4432 335666677777777776653
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=2.3e-12 Score=119.96 Aligned_cols=43 Identities=21% Similarity=0.242 Sum_probs=18.4
Q ss_pred cccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCC
Q 047790 131 QLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLN 173 (885)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 173 (885)
.|.++++|++|+|++|+|+...|.+|..+++|++|+|++|+|+
T Consensus 51 ~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~ 93 (156)
T d2ifga3 51 DLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE 93 (156)
T ss_dssp GSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS
T ss_pred hhccccccCcceeeccccCCcccccccccccccceeccCCCCc
Confidence 3444444444444444444333344444444444444444444
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=3.1e-12 Score=119.03 Aligned_cols=110 Identities=22% Similarity=0.187 Sum_probs=91.7
Q ss_pred CcCCCCEEeccCCcCCCCCCccccccccccEeeeecc-CCCCCCCccccCCccCceEEccCCcCCccCCcccCCCCCCcc
Q 047790 110 NLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSN-SFTGEMPSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQD 188 (885)
Q Consensus 110 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 188 (885)
.+...+.++.+++.+. ..|..+..+++|++|++++| .++...+.+|.++++|+.|+|++|+|+.+.|.+|..+++|++
T Consensus 6 ~c~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~ 84 (156)
T d2ifga3 6 CPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSR 84 (156)
T ss_dssp CCSSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCE
T ss_pred CcCCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccc
Confidence 3445566788888777 56778888899999999766 588666778999999999999999999888888999999999
Q ss_pred ccccccccCCCCCcccccccccccEEEeecccCc
Q 047790 189 LDLSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLS 222 (885)
Q Consensus 189 L~Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~ 222 (885)
|+|++|+|+ .+|.+.|..+ +|++|+|++|.+.
T Consensus 85 L~Ls~N~l~-~l~~~~~~~~-~l~~L~L~~Np~~ 116 (156)
T d2ifga3 85 LNLSFNALE-SLSWKTVQGL-SLQELVLSGNPLH 116 (156)
T ss_dssp EECCSSCCS-CCCSTTTCSC-CCCEEECCSSCCC
T ss_pred eeccCCCCc-ccChhhhccc-cccccccCCCccc
Confidence 999999998 8888877655 6999999999885
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.48 E-value=3.3e-09 Score=98.86 Aligned_cols=87 Identities=21% Similarity=0.132 Sum_probs=41.4
Q ss_pred CcCCCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCC--CccccCCccCceEEccCCcCCccCCcccCCCCCCc
Q 047790 110 NLKRLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEM--PSELGDIKQLKSLDFSGNGLNGTIPSRLGDLTQLQ 187 (885)
Q Consensus 110 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 187 (885)
.+..+..|+..++... .++..+..+++|++|+|++|+|+..- +..+..+++|+.|+|++|+|+...+-.+....+|+
T Consensus 40 ~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~ 118 (162)
T d1koha1 40 AQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLE 118 (162)
T ss_dssp TTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCS
T ss_pred hccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccc
Confidence 3333444444333332 23333344556666666666665321 23344555666666666666533222222333455
Q ss_pred cccccccccC
Q 047790 188 DLDLSDNLLS 197 (885)
Q Consensus 188 ~L~Ls~N~l~ 197 (885)
.|++++|.++
T Consensus 119 ~L~L~~Npl~ 128 (162)
T d1koha1 119 ELWLDGNSLS 128 (162)
T ss_dssp SCCCTTSTTS
T ss_pred eeecCCCCcC
Confidence 6666666555
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.45 E-value=4.7e-09 Score=97.81 Aligned_cols=107 Identities=22% Similarity=0.087 Sum_probs=73.1
Q ss_pred CCCEEeccCCcCCCCCCccccccccccEeeeeccCCCCCCCccccCCccCceEEccCCcCCccC--CcccCCCCCCcccc
Q 047790 113 RLKMLSVGENQLSGSIPSQLGLLTRLETISLRSNSFTGEMPSELGDIKQLKSLDFSGNGLNGTI--PSRLGDLTQLQDLD 190 (885)
Q Consensus 113 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~ 190 (885)
+.+.|++++.... ..+..+..+..++..++... .++..+..+++|++|+|++|+|+... +..+..+++|+.|+
T Consensus 23 ~~~~Ldls~l~~~----~~l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~ 97 (162)
T d1koha1 23 SQQALDLKGLRSD----PDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILN 97 (162)
T ss_dssp SSCCBCCCCCSSC----TTTTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCC
T ss_pred hhCeeecccCCCC----chhhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccc
Confidence 3455666554432 22444555666666666544 44455567899999999999998542 34567789999999
Q ss_pred ccccccCCCCCcccccccccccEEEeecccCcccC
Q 047790 191 LSDNLLSGSLPVSLLKNLQSLSYLDVSNNLLSGNI 225 (885)
Q Consensus 191 Ls~N~l~~~~p~~~~~~l~~L~~L~Ls~N~l~~~~ 225 (885)
|++|.++ .++.-.+-...+|+.|++++|.+....
T Consensus 98 Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~~~~ 131 (162)
T d1koha1 98 LSGNELK-SERELDKIKGLKLEELWLDGNSLSDTF 131 (162)
T ss_dssp CTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTSSSS
T ss_pred cccCccc-cchhhhhhhccccceeecCCCCcCcCc
Confidence 9999998 666533444567899999999887543
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.30 E-value=2.7e-06 Score=85.62 Aligned_cols=141 Identities=13% Similarity=0.027 Sum_probs=97.3
Q ss_pred EeecceecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEEecccC
Q 047790 663 IVFENVIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVYEYMVN 741 (885)
Q Consensus 663 ~~~~~~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~ 741 (885)
|+..+..+.++.+.||+... +++.+++|+..........++.+|.+.++.+. +--+.+++.+...++..++||++++|
T Consensus 16 ~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G 94 (263)
T d1j7la_ 16 YRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp SEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred eEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccc
Confidence 44444444455578999864 55667888876655444556788888888775 33477888888888899999999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhccC-------------------------------------------
Q 047790 742 GSLDDWLRNRAASLDWGKRCKIAYGAARGISFLHHGF------------------------------------------- 778 (885)
Q Consensus 742 ~sL~~~l~~~~~~~~~~~~~~i~~~l~~~l~~LH~~~------------------------------------------- 778 (885)
.++.+..... . ....++.++++.++.+|...
T Consensus 95 ~~~~~~~~~~---~---~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T d1j7la_ 95 VLCSEEYEDE---Q---SPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp EEHHHHTTTC---S---CHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHH
T ss_pred cccccccccc---c---cHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHH
Confidence 8876644321 1 12334555556666666221
Q ss_pred -------------CCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 779 -------------KPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 779 -------------~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
...++|+|+.|.||++++++.+.++||+.+..
T Consensus 169 ~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 11258999999999999876667999998754
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.84 E-value=2.4e-05 Score=78.06 Aligned_cols=74 Identities=14% Similarity=0.075 Sum_probs=53.6
Q ss_pred eecccCC-ceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCC--CCccceeeeeEeCCeeEEEEecccCCCH
Q 047790 668 VIGGGGF-RTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKH--QNLVQLLGYCSVGEEKLLVYEYMVNGSL 744 (885)
Q Consensus 668 ~lG~G~~-g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~~lv~e~~~~~sL 744 (885)
.+..|.. +.||+....++..+++|...... ...+..|.+.++.+.. -.+.+++.+..+++..++||++++|.++
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~ 93 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 93 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence 3445554 67899988888888899765433 3456778888877653 3367778887888888999999987654
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.46 E-value=0.00021 Score=75.70 Aligned_cols=76 Identities=14% Similarity=0.096 Sum_probs=49.0
Q ss_pred ceecccCCceEEEEEeCC-CCeEEEEEecccc-------cccHHHHHHHHHHhcccC-C--CCccceeeeeEeCCeeEEE
Q 047790 667 NVIGGGGFRTAFKGTMPD-QKTVAVKKLSQAT-------GQCDREFAAEMETLDMVK-H--QNLVQLLGYCSVGEEKLLV 735 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~-~~~valK~~~~~~-------~~~~~~~~~E~~~l~~l~-~--~~i~~~~~~~~~~~~~~lv 735 (885)
+.||.|....||++...+ ++.+++|.-.... +....+...|.++++.+. + ..+++++.+ +....++|
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lv 109 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 109 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEE
Confidence 457889999999998765 6778888653211 123345667888887664 2 235555544 45567899
Q ss_pred EecccCCCH
Q 047790 736 YEYMVNGSL 744 (885)
Q Consensus 736 ~e~~~~~sL 744 (885)
||++++..+
T Consensus 110 mE~L~~~~~ 118 (392)
T d2pula1 110 MEDLSHLKI 118 (392)
T ss_dssp ECCCTTSEE
T ss_pred EeccCCccc
Confidence 999977543
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.44 E-value=7.5e-06 Score=75.83 Aligned_cols=62 Identities=15% Similarity=0.095 Sum_probs=30.6
Q ss_pred CCccCceEEccCCcCCcc----CCcccCCCCCCccccccccccCCCCC-------cccccccccccEEEeeccc
Q 047790 158 DIKQLKSLDFSGNGLNGT----IPSRLGDLTQLQDLDLSDNLLSGSLP-------VSLLKNLQSLSYLDVSNNL 220 (885)
Q Consensus 158 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p-------~~~~~~l~~L~~L~Ls~N~ 220 (885)
..+.|++|+|++|.|+.. +-.++...++|++|++++|.+. .+. ...+...++|+.|+++.+.
T Consensus 70 ~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~-~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 70 TSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQS-VLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSC-CCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred hcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCC-CccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 344555555555555421 1223444555666666655543 221 1123345667777766554
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.30 E-value=3.3e-05 Score=71.31 Aligned_cols=40 Identities=20% Similarity=0.259 Sum_probs=19.7
Q ss_pred cCCCCCcEEEecCCccccccc----ccccCCCCCcEEEccCCCC
Q 047790 259 GNCSMLKYISLSNNKLSGPIP----RELCNSGSLVEINLDGNML 298 (885)
Q Consensus 259 ~~l~~L~~L~Ls~N~l~~~~p----~~l~~l~~L~~L~L~~N~l 298 (885)
...+.|++|+|++|.++.... ..+...++|++|++++|.+
T Consensus 69 ~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~ 112 (167)
T d1pgva_ 69 ETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQ 112 (167)
T ss_dssp HHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSS
T ss_pred hhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcC
Confidence 334556666666666553221 2333444555555555543
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.82 E-value=0.0022 Score=65.65 Aligned_cols=133 Identities=14% Similarity=0.103 Sum_probs=79.6
Q ss_pred ceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCCc--ccee-----eeeEeCCeeEEEEecccCCCH---
Q 047790 675 RTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQNL--VQLL-----GYCSVGEEKLLVYEYMVNGSL--- 744 (885)
Q Consensus 675 g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~i--~~~~-----~~~~~~~~~~lv~e~~~~~sL--- 744 (885)
-.||+++.++|..|++|+..... ...+.+..|.+.+..|....+ +... ..+..+...+.++++++|..+
T Consensus 36 N~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~~ 114 (325)
T d1zyla1 36 NRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEAD 114 (325)
T ss_dssp SEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSS
T ss_pred ceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCCC
Confidence 57999999999999999986543 345778889988887752221 1111 123456778899999976421
Q ss_pred --HHH------H---hh--c------CCC-------------------CC---HHHHHHHHHHHHHHHHHHh-ccCCCCc
Q 047790 745 --DDW------L---RN--R------AAS-------------------LD---WGKRCKIAYGAARGISFLH-HGFKPYI 782 (885)
Q Consensus 745 --~~~------l---~~--~------~~~-------------------~~---~~~~~~i~~~l~~~l~~LH-~~~~~~i 782 (885)
..+ + +. . ... .+ .......+.++...+...- .....++
T Consensus 115 ~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~l 194 (325)
T d1zyla1 115 NIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLR 194 (325)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEE
T ss_pred CHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCcee
Confidence 111 1 00 0 000 11 1122333334443333321 2224678
Q ss_pred eecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 783 IHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 783 ~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
+|+|+.+.||+++++ ..++||+-+..
T Consensus 195 iHgDlh~~NvL~~~~--~~~IDFdd~~~ 220 (325)
T d1zyla1 195 LHGDCHAGNILWRDG--PMFVDLDDARN 220 (325)
T ss_dssp CCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred ecCCCCcccEEEeCC--ceEEechhccc
Confidence 999999999999754 46899997754
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.50 E-value=6.9e-05 Score=69.05 Aligned_cols=40 Identities=13% Similarity=0.057 Sum_probs=19.4
Q ss_pred CCCCCCEEecCC-CcccCc----CCcCccCcCCCCEEeccCCcCC
Q 047790 86 NLSSLRILDLSK-NLLFGQ----LSPQVSNLKRLKMLSVGENQLS 125 (885)
Q Consensus 86 ~l~~L~~L~Ls~-n~l~~~----~~~~~~~l~~L~~L~L~~n~l~ 125 (885)
+-+.|++|+|++ +.++.. +-..+...+.|++|+|++|.++
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~ 59 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 59 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCccc
Confidence 445666666665 334322 1222334455555555555554
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.38 E-value=0.0058 Score=64.36 Aligned_cols=71 Identities=17% Similarity=0.189 Sum_probs=47.2
Q ss_pred ceecccCCceEEEEEeCC--------CCeEEEEEecccccccHHHHHHHHHHhcccC-CCCccceeeeeEeCCeeEEEEe
Q 047790 667 NVIGGGGFRTAFKGTMPD--------QKTVAVKKLSQATGQCDREFAAEMETLDMVK-HQNLVQLLGYCSVGEEKLLVYE 737 (885)
Q Consensus 667 ~~lG~G~~g~vy~a~~~~--------~~~valK~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e 737 (885)
+.|+.|-.-.+|++...+ .+.|++++.-. .....+..+|.++++.+. +.-..++++++.. .+|+|
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~--~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e 121 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN--PETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 121 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS--CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC--cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence 456777788899987543 34566666542 233456778999998886 4445577776642 57899
Q ss_pred cccCCC
Q 047790 738 YMVNGS 743 (885)
Q Consensus 738 ~~~~~s 743 (885)
|++|..
T Consensus 122 fi~g~~ 127 (395)
T d1nw1a_ 122 YIPSRP 127 (395)
T ss_dssp CCCEEE
T ss_pred Eecccc
Confidence 998753
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.03 E-value=0.00048 Score=63.13 Aligned_cols=62 Identities=21% Similarity=0.324 Sum_probs=29.6
Q ss_pred cCCCCCcEEEecCCccccc----ccccccCCCCCcEEEc--cCCCCcC----cccccccccCCcceeecccc
Q 047790 259 GNCSMLKYISLSNNKLSGP----IPRELCNSGSLVEINL--DGNMLSG----TIEDVFDRCTNLSELVLVNN 320 (885)
Q Consensus 259 ~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L--~~N~l~~----~~~~~~~~l~~L~~L~Ls~N 320 (885)
...+.++.+++++|.++.. +...+...++|+.++| ++|.+.. .+.+.+...++|+.|+++.+
T Consensus 71 ~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 71 KVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp HHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred hhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCC
Confidence 3445566666666666532 2234444555555433 3444433 22233344555555555443
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.29 E-value=0.05 Score=54.77 Aligned_cols=140 Identities=9% Similarity=-0.006 Sum_probs=73.0
Q ss_pred eecccCCceEEEEEeCCCCeEEEEEecccccccHHHHHHHHHHhcccCCCC--ccceee------eeEeCCeeEEEEecc
Q 047790 668 VIGGGGFRTAFKGTMPDQKTVAVKKLSQATGQCDREFAAEMETLDMVKHQN--LVQLLG------YCSVGEEKLLVYEYM 739 (885)
Q Consensus 668 ~lG~G~~g~vy~a~~~~~~~valK~~~~~~~~~~~~~~~E~~~l~~l~~~~--i~~~~~------~~~~~~~~~lv~e~~ 739 (885)
.|..|---..|+.+..+| .+++|++.... ....+..|++++..+.... |..... +...+...+.++.++
T Consensus 25 ~i~~G~~N~ny~v~t~~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~~~~~~~~~~ 101 (316)
T d2ppqa1 25 GIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 101 (316)
T ss_dssp EECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred cCCCCcccCeEEEEECCC-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccceecCCCcceeeecccceeeeec
Confidence 445566677898887655 49999986532 2344555666666654211 221111 123345566677776
Q ss_pred cCCCH-----HH------H---Hhhc--C------------------------CCCCHHHHHHHHHHHHHHHHHHh-ccC
Q 047790 740 VNGSL-----DD------W---LRNR--A------------------------ASLDWGKRCKIAYGAARGISFLH-HGF 778 (885)
Q Consensus 740 ~~~sL-----~~------~---l~~~--~------------------------~~~~~~~~~~i~~~l~~~l~~LH-~~~ 778 (885)
.+... .. . ++.. . ...........+......+...+ ...
T Consensus 102 ~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 181 (316)
T d2ppqa1 102 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 181 (316)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred ccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchhHHHHHHHHHHhhhccCcccc
Confidence 65322 00 0 0000 0 00011112222222333333332 223
Q ss_pred CCCceecCCCCCcEEEcCCCcEEEeeccCccc
Q 047790 779 KPYIIHMDIKTSNILLNDYFEAKVSDFGLARL 810 (885)
Q Consensus 779 ~~~i~H~dlkp~Nil~~~~~~vkl~Dfg~a~~ 810 (885)
..|+||+|+.++||+++++...-++||+.+..
T Consensus 182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 182 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN 213 (316)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccccccCCcchhhhhcccccceeEeccccccc
Confidence 67899999999999999887778999998754
|