Citrus Sinensis ID: 047791

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------
MERALEVQVLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYKADNNVRAEQMSQRLKSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTTTA
cccccEEEEEEEEEEEcccccccccccccccccccccccccEEEEEEEccccccccHHHHHHHHHHHHHccccccccccEEccccEEEEccccEEEEEEEEcccHHHHccccccHHHHccccccccccccccccccEEEEEEEEEcccEEEEEcccccccccHHHHHHHHHHHHHcc
ccEEEEEEEcccccccccccccccccEccccccccccccEEEEEEEEEccccccccccHHHHHHHHHHHHHHHHcccHcHHcccEEEEccccEEEEEEEccccEHHHHccccccccHHHcccccccccccccccccEEEEEEEEEcccHEEEEEEEcccHccHHHHHHHHHHHHHHc
MERALEVQVLAREsikpayptpqhlRNFKLSLMDQINFPVYVSTIFLYKADNNVRAEQMSQRLKSSLSKTLtkfypfagrvkddfsieCNDEGAEYVEALANGFLfeylqkpdqnllrdfhpfnyaespvasngcpmlrIQATFFKCGGLAITICtchklidgvslGIFVNSWTTTA
MERALEVQVLaresikpayptpqHLRNFKLSLMDQINFPVYVSTIFLYKADNNVRAEQMSQRLKSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTTTA
MERALEVQVLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYKADNNVRAEQMSQRLKSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTTTA
******************YPTPQHLRNFKLSLMDQINFPVYVSTIFLYKADNNV**************KTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWT***
****LEV*VLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYKADNNVRAEQMSQRLKSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTTTA
MERALEVQVLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYKADNNVRAEQMSQRLKSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTTTA
*ERALEVQVLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYKADNNVRAEQMSQRLKSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTTTA
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MERALEVQVLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYKADNNVRAEQMSQRLKSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTTTA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query177 2.2.26 [Sep-21-2011]
Q70PR7 421 Vinorine synthase OS=Rauv N/A no 0.954 0.401 0.381 1e-26
Q94FT4 474 Salutaridinol 7-O-acetylt N/A no 0.920 0.343 0.372 7e-26
Q9FI40 443 BAHD acyltransferase At5g no no 0.949 0.379 0.420 7e-25
Q9ZTK5 439 Deacetylvindoline O-acety N/A no 0.966 0.389 0.333 3e-22
O64470 451 Spermidine hydroxycinnamo no no 0.903 0.354 0.291 4e-16
Q94CD1 457 Omega-hydroxypalmitate O- no no 0.937 0.363 0.333 3e-15
O24645 445 Anthranilate N-benzoyltra N/A no 0.954 0.379 0.331 5e-15
O23917 446 Anthranilate N-benzoyltra N/A no 0.954 0.378 0.331 9e-15
O23918 445 Anthranilate N-benzoyltra N/A no 0.954 0.379 0.326 3e-14
Q9M6E2 440 10-deacetylbaccatin III 1 N/A no 0.813 0.327 0.301 2e-13
>sp|Q70PR7|VINSY_RAUSE Vinorine synthase OS=Rauvolfia serpentina GN=ACT PE=1 SV=2 Back     alignment and function desciption
 Score =  119 bits (298), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 102/181 (56%), Gaps = 12/181 (6%)

Query: 4   ALEVQVLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYK--ADNNVRAEQMSQ 61
           A +++ ++ E I P+ PTPQ L+ +K+S +DQ+    ++  I  Y    D+N+   Q SQ
Sbjct: 2   APQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQ 61

Query: 62  RLKSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQ------KPDQN 115
            LK SLSK LT FYP AGR+  + S++CND G  +VEA     L + +Q      K DQ 
Sbjct: 62  HLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQY 121

Query: 116 LLRDFHPFNYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTT 175
           L    +P    E    +   P L ++ +FF+CGG AI +   HK+ D +SL  F+N+WT 
Sbjct: 122 LPSAAYPGGKIE---VNEDVP-LAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTA 177

Query: 176 T 176
           T
Sbjct: 178 T 178
Acetyltransferase that catalyzes the formation of vinorine, a precursor of the antiarrhythmic monoterpenoid indole alkaloid ajmaline. Acts on gardneral, but not on polyneuridine aldehyde or N-methylgardneral.
Rauvolfia serpentina (taxid: 4060)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 6EC: 0
>sp|Q94FT4|SALAT_PAPSO Salutaridinol 7-O-acetyltransferase OS=Papaver somniferum GN=SALAT PE=1 SV=1 Back     alignment and function description
>sp|Q9FI40|BAHD1_ARATH BAHD acyltransferase At5g47980 OS=Arabidopsis thaliana GN=BAHD1 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZTK5|DAT_CATRO Deacetylvindoline O-acetyltransferase OS=Catharanthus roseus GN=DAT PE=1 SV=1 Back     alignment and function description
>sp|O64470|SHT_ARATH Spermidine hydroxycinnamoyl transferase OS=Arabidopsis thaliana GN=SHT PE=1 SV=1 Back     alignment and function description
>sp|Q94CD1|HHT1_ARATH Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1 Back     alignment and function description
>sp|O24645|HCBT1_DIACA Anthranilate N-benzoyltransferase protein 1 OS=Dianthus caryophyllus GN=HCBT1 PE=1 SV=1 Back     alignment and function description
>sp|O23917|HCBT2_DIACA Anthranilate N-benzoyltransferase protein 2 OS=Dianthus caryophyllus GN=HCBT2 PE=1 SV=1 Back     alignment and function description
>sp|O23918|HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 OS=Dianthus caryophyllus GN=HCBT3 PE=1 SV=1 Back     alignment and function description
>sp|Q9M6E2|DBAT_TAXCU 10-deacetylbaccatin III 10-O-acetyltransferase OS=Taxus cuspidata PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query177
449515991 434 PREDICTED: BAHD acyltransferase At5g4798 0.971 0.396 0.442 1e-37
449469643 434 PREDICTED: BAHD acyltransferase At5g4798 0.971 0.396 0.442 1e-37
255547900 441 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltr 0.988 0.396 0.415 8e-37
224104303 346 predicted protein [Populus trichocarpa] 0.988 0.505 0.428 9e-37
224100077 439 predicted protein [Populus trichocarpa] 0.966 0.389 0.442 4e-36
224089615 432 predicted protein [Populus trichocarpa] 0.971 0.398 0.425 1e-35
224061883 449 predicted protein [Populus trichocarpa] 0.949 0.374 0.435 2e-35
297815300 443 transferase family protein [Arabidopsis 0.983 0.392 0.418 3e-35
224107681 445 predicted protein [Populus trichocarpa] 0.966 0.384 0.459 3e-35
15230740 443 HXXXD-type acyl-transferase-like protein 0.983 0.392 0.412 3e-35
>gi|449515991|ref|XP_004165031.1| PREDICTED: BAHD acyltransferase At5g47980-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 113/174 (64%), Gaps = 2/174 (1%)

Query: 5   LEVQVLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYKADNNVRA-EQMSQRL 63
           +E+Q+L +E IKP+ PTP HL  F +SL+DQ++   YV  I  +   N   +  + S RL
Sbjct: 1   MELQILTKEIIKPSSPTPSHLHRFNISLLDQLSTAGYVPVILFFPNSNGAPSFHERSHRL 60

Query: 64  KSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPF 123
           K SL++TLT+FYP AGR + +  I+CND+GAEYVEA AN  L ++L++P  +LL  F P 
Sbjct: 61  KKSLAETLTRFYPLAGRPRQNSYIDCNDDGAEYVEARANCVLSDFLKEPTPDLLAQFLPI 120

Query: 124 NYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTTTA 177
              E+P A++G  ML +Q T F+CGG+A+ I   HKL+D  S+ + +  W+  A
Sbjct: 121 K-TEAPEAADGGRMLLVQVTLFECGGMAMGISFSHKLVDASSISVILKCWSAAA 173

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449469643|ref|XP_004152528.1| PREDICTED: BAHD acyltransferase At5g47980-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255547900|ref|XP_002515007.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] gi|223546058|gb|EEF47561.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224104303|ref|XP_002333962.1| predicted protein [Populus trichocarpa] gi|222839277|gb|EEE77614.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224100077|ref|XP_002311734.1| predicted protein [Populus trichocarpa] gi|222851554|gb|EEE89101.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224089615|ref|XP_002308780.1| predicted protein [Populus trichocarpa] gi|222854756|gb|EEE92303.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224061883|ref|XP_002300646.1| predicted protein [Populus trichocarpa] gi|222842372|gb|EEE79919.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297815300|ref|XP_002875533.1| transferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297321371|gb|EFH51792.1| transferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224107681|ref|XP_002314561.1| predicted protein [Populus trichocarpa] gi|222863601|gb|EEF00732.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15230740|ref|NP_189647.1| HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana] gi|9294332|dbj|BAB02229.1| acetyl-CoA:benzylalcohol acetyltranferase-like protein [Arabidopsis thaliana] gi|332644108|gb|AEE77629.1| HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query177
TAIR|locus:2102936 443 AT3G30280 [Arabidopsis thalian 0.988 0.395 0.418 5.1e-35
TAIR|locus:2092090 442 AT3G26040 [Arabidopsis thalian 0.937 0.375 0.414 1.3e-34
TAIR|locus:2130065 446 AT4G15390 [Arabidopsis thalian 0.971 0.385 0.417 2.8e-34
TAIR|locus:2024061 436 AT1G24420 [Arabidopsis thalian 0.971 0.394 0.436 6e-32
TAIR|locus:2152783 426 AT5G47950 [Arabidopsis thalian 0.949 0.394 0.408 4.9e-30
TAIR|locus:2178667 428 AT5G23970 [Arabidopsis thalian 0.903 0.373 0.427 2.7e-29
TAIR|locus:2024036 435 AT1G24430 [Arabidopsis thalian 0.949 0.386 0.388 9.4e-27
TAIR|locus:2130075 435 BIA1 "BRASSINOSTEROID INACTIVA 0.943 0.383 0.421 5.6e-26
TAIR|locus:2152763 443 AT5G47980 [Arabidopsis thalian 0.949 0.379 0.420 1e-24
TAIR|locus:2162976 457 RWP1 "REDUCED LEVELS OF WALL-B 0.943 0.365 0.329 2.1e-16
TAIR|locus:2102936 AT3G30280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 75/179 (41%), Positives = 112/179 (62%)

Query:     1 MERALEVQVLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYKADNNVRAEQMS 60
             ME  ++V+ +A+E IKP+  TP  L+  +LS+ D I  PVY      Y  D+ +  EQ S
Sbjct:     1 ME-TMKVETIAKEIIKPSSTTPNDLQTLQLSIYDHILPPVYTVAFLFYTKDDLISPEQSS 59

Query:    61 QRLKSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGF-LFEYLQKPDQNLLRD 119
              +LK+SL++TLTKFYP AGR+K   +I+CNDEGA +V+A  N + L ++L+ PD   L+ 
Sbjct:    60 HKLKTSLAETLTKFYPLAGRIKG-VTIDCNDEGAVFVDARVNNYPLSDFLRSPDFKTLQQ 118

Query:   120 FHPFNYAESPV-ASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTTTA 177
               P +  + P  A+   P+L ++AT+F CGG+AI +C  HK+ D  S+  F+ SW   A
Sbjct:   119 LLPLDVIDDPYEAATTWPLLLVKATYFPCGGMAIGLCITHKIADATSISTFIQSWAAMA 177
GO:0005737 "cytoplasm" evidence=ISM
GO:0016740 "transferase activity" evidence=ISS
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
TAIR|locus:2092090 AT3G26040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130065 AT4G15390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024061 AT1G24420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152783 AT5G47950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178667 AT5G23970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024036 AT1G24430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130075 BIA1 "BRASSINOSTEROID INACTIVATOR1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152763 AT5G47980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2162976 RWP1 "REDUCED LEVELS OF WALL-BOUND PHENOLICS 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_scaffold_887000001
hypothetical protein (346 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query177
PLN00140 444 PLN00140, PLN00140, alcohol acetyltransferase fami 1e-46
pfam02458 432 pfam02458, Transferase, Transferase family 1e-46
PLN02481 436 PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul 5e-26
PLN03157 447 PLN03157, PLN03157, spermidine hydroxycinnamoyl tr 3e-23
PLN02663 431 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate 1e-15
>gnl|CDD|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional Back     alignment and domain information 
 Score =  157 bits (399), Expect = 1e-46
 Identities = 72/176 (40%), Positives = 105/176 (59%), Gaps = 8/176 (4%)

Query: 5   LEVQVLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYKADNN--VRAEQMSQR 62
           +EV +++RE IKP+ P+  HL+ FKLSL+DQ+    Y+  IF Y  +NN   +  Q+S +
Sbjct: 1   MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNFKGLQISIQ 60

Query: 63  LKSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDF-- 120
           LK SLS+TL+ FYPF+GRVKD+  I+  +EG  + E    G L ++L+ P   LL  F  
Sbjct: 61  LKRSLSETLSTFYPFSGRVKDNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLP 120

Query: 121 -HPFNYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTT 175
             PF+Y   P      P + IQ   F CGG+A+ +C  HK+ID  +   F++SW  
Sbjct: 121 CQPFSYESDP---EAIPQVAIQVNTFDCGGIALGLCFSHKIIDAATASAFLDSWAA 173

Length = 444
>gnl|CDD|217048 pfam02458, Transferase, Transferase family Back     alignment and domain information
>gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase Back     alignment and domain information
>gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional Back     alignment and domain information
>gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 177
PLN00140 444 alcohol acetyltransferase family protein; Provisio 100.0
PLN03157 447 spermidine hydroxycinnamoyl transferase; Provision 100.0
PF02458 432 Transferase: Transferase family; InterPro: IPR0034 100.0
PLN02663 431 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn 100.0
PLN02481 436 Omega-hydroxypalmitate O-feruloyl transferase 100.0
PF03007 263 WES_acyltransf: Wax ester synthase-like Acyl-CoA a 97.74
PRK09294 416 acyltransferase PapA5; Provisional 97.45
TIGR02946 446 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b 97.3
PF00668 301 Condensation: Condensation domain; InterPro: IPR00 97.16
COG4908 439 Uncharacterized protein containing a NRPS condensa 96.88
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 95.5
PRK12467 3956 peptide synthase; Provisional 94.05
PRK05691 4334 peptide synthase; Validated 93.74
PRK12467 3956 peptide synthase; Provisional 93.2
PRK05691 4334 peptide synthase; Validated 92.92
PRK12316 5163 peptide synthase; Provisional 92.78
PRK12316 5163 peptide synthase; Provisional 90.77
PF07247 480 AATase: Alcohol acetyltransferase; InterPro: IPR01 88.11
PRK13757219 chloramphenicol acetyltransferase; Provisional 85.23
PF00302206 CAT: Chloramphenicol acetyltransferase; InterPro: 81.62
PRK11856411 branched-chain alpha-keto acid dehydrogenase subun 81.22
>PLN00140 alcohol acetyltransferase family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.2e-43  Score=300.69  Aligned_cols=173  Identities=40%  Similarity=0.753  Sum_probs=149.7

Q ss_pred             ceEEEEeeEEEeCCCCCCCCCceeeCCcCcccccCcceEEEEEEeCCCCCC--hhHHHHHHHHHHHHhcccccCCceeec
Q 047791            5 LEVQVLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYKADNNVR--AEQMSQRLKSSLSKTLTKFYPFAGRVK   82 (177)
Q Consensus         5 ~~v~i~~~~~V~P~~~~p~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~LaGrl~   82 (177)
                      |+|+++++++|+|+.|||.+.+.++||.|||..++.|++.+|||+.+.+.+  ...++++||+||+++|++||||||||+
T Consensus         1 ~~v~~~s~~~V~Ps~ptp~~~~~~~LS~lD~~~~~~~~~~~~fY~~~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~   80 (444)
T PLN00140          1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNFKGLQISIQLKRSLSETLSTFYPFSGRVK   80 (444)
T ss_pred             CeeEEeccceeccCCCCccccccCCCChHHhcccccccceEEEeeCCCcccccchhHHHHHHHHHHHHHhhhhccCcccc
Confidence            579999999999999998766689999999988889999999999865322  236789999999999999999999999


Q ss_pred             CceeEEeCCCCeEEEEEeeceeccccCCCCChhhhcccCCCCCCCCCCCCCCCCeeEEEEEEecCCeEEEEeccccccch
Q 047791           83 DDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLID  162 (177)
Q Consensus        83 ~~~~i~~~~~gv~~~~a~~~~s~~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~pll~vQvt~f~cGG~~lg~~~~H~v~D  162 (177)
                      .+++|.|||+||.|+||+++.+++|+...|+...+.+|+|..+........+.|++.+|||+|+|||++||+++||.++|
T Consensus        81 ~~~~i~cn~~Gv~fveA~~~~~l~d~l~~~~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvT~F~cGG~~lG~~~~H~v~D  160 (444)
T PLN00140         81 DNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLPCQPFSYESDPEAIPQVAIQVNTFDCGGIALGLCFSHKIID  160 (444)
T ss_pred             CCceeEccCCCceEEEEEecCcHHHhcCCCCHHHHHhhCCCCcccccCCccCCceEEEEEEEeccCcEEEEeeeceEccc
Confidence            88999999999999999999999998776665566788886532100112457999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHhcC
Q 047791          163 GVSLGIFVNSWTTTA  177 (177)
Q Consensus       163 g~~~~~fl~~Wa~~~  177 (177)
                      |.|+.+|+++||++|
T Consensus       161 g~s~~~Fl~~WA~~~  175 (444)
T PLN00140        161 AATASAFLDSWAANT  175 (444)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999999987

>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional Back     alignment and domain information
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes Back     alignment and domain information
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase Back     alignment and domain information
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase Back     alignment and domain information
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins Back     alignment and domain information
>PRK09294 acyltransferase PapA5; Provisional Back     alignment and domain information
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT Back     alignment and domain information
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics Back     alignment and domain information
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 Back     alignment and domain information
>PRK13757 chloramphenicol acetyltransferase; Provisional Back     alignment and domain information
>PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2 Back     alignment and domain information
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query177
2bgh_A 421 Crystal Structure Of Vinorine Synthase Length = 421 1e-27
4g0b_A 436 Structure Of Native Hct From Coffea Canephora Lengt 3e-17
4g2m_A 439 Structure Of A Lys-Hct Mutant From Coffea Canephora 6e-17
4g22_A 439 Structure Of A Lys-Hct Mutant From Coffea Canephora 8e-16
2e1v_A 454 Crystal Structure Of Dendranthema Morifolium Dmat, 9e-05
2e1t_A 454 Crystal Structure Of Dendranthema Morifolium Dmat C 9e-05
>pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase Length = 421 Back     alignment and structure 
Iteration: 1

 Score =  119 bits (298), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 102/181 (56%), Gaps = 12/181 (6%)
Query: 4   ALEVQVLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYK--ADNNVRAEQMSQ 61
           A +++ ++ E I P+ PTPQ L+ +K+S +DQ+    ++  I  Y    D+N+   Q SQ
Sbjct: 2   APQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQ 61
Query: 62  RLKSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQ------KPDQN 115
            LK SLSK LT FYP AGR+  + S++CND G  +VEA     L + +Q      K DQ 
Sbjct: 62  HLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQY 121
Query: 116 LLRDFHPFNYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTT 175
           L    +P    E    +   P L ++ +FF+CGG AI +   HK+ D +SL  F+N+WT 
Sbjct: 122 LPSAAYPGGKIE---VNEDVP-LAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTA 177
Query: 176 T 176
           T
Sbjct: 178 T 178
>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436 Back     alignment and structure
>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439 Back     alignment and structure
>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439 Back     alignment and structure
>pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno- Methionine Derivative Length = 454 Back     alignment and structure
>pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat Complexed With Malonyl-coa Length = 454 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query177
2bgh_A 421 Vinorine synthase; VS, BAHD, acetyltransferase, au 1e-58
4g22_A 439 Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn 3e-54
2xr7_A 453 Malonyltransferase; xenobiotics, naphthols; HET: M 1e-44
2e1v_A 454 Acyl transferase; BAHD superfamily, seleno-methion 5e-43
2rkv_A 451 Trichothecene 3-O-acetyltransferase; BAHD superfam 9e-32
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 Back     alignment and structure
 Score =  187 bits (477), Expect = 1e-58
 Identities = 66/178 (37%), Positives = 100/178 (56%), Gaps = 4/178 (2%)

Query: 4   ALEVQVLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYKA--DNNVRAEQMSQ 61
           A +++ ++ E I P+ PTPQ L+ +K+S +DQ+    ++  I  Y    D+N+   Q SQ
Sbjct: 2   APQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQ 61

Query: 62  RLKSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALANGFLFEYLQK-PDQNLLRDF 120
            LK SLSK LT FYP AGR+  + S++CND G  +VEA     L + +Q   +   L  +
Sbjct: 62  HLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQY 121

Query: 121 HPFN-YAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTTTA 177
            P   Y    +  N    L ++ +FF+CGG AI +   HK+ D +SL  F+N+WT T 
Sbjct: 122 LPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATC 179
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 Back     alignment and structure
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 Back     alignment and structure
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 Back     alignment and structure
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query177
2bgh_A 421 Vinorine synthase; VS, BAHD, acetyltransferase, au 100.0
4g22_A 439 Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn 100.0
2e1v_A 454 Acyl transferase; BAHD superfamily, seleno-methion 100.0
2xr7_A 453 Malonyltransferase; xenobiotics, naphthols; HET: M 100.0
2rkv_A 451 Trichothecene 3-O-acetyltransferase; BAHD superfam 99.96
1q9j_A 422 PAPA5, polyketide synthase associated protein 5; c 97.89
4hvm_A 493 Tlmii; PSI-biology, midwest center for structural 97.21
1l5a_A 436 Amide synthase, VIBH; nonribosomal peptide synthet 97.17
2jgp_A 520 Tyrocidine synthetase 3; multifunctional enzyme, a 96.62
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 95.77
2xhg_A 466 Tyrocidine synthetase A; isomerase, nonribosomal p 94.43
3cla_A213 Type III chloramphenicol acetyltransferase; transf 86.81
2i9d_A217 Chloramphenicol acetyltransferase; structural geno 86.26
1q23_A219 Chloramphenicol acetyltransferase; CAT I, trimer, 85.75
3rqc_A224 Probable lipoamide acyltransferase; alpha beta fol 85.46
3b8k_A239 PDCE2;, dihydrolipoyllysine-residue acetyltransfer 85.33
1dpb_A243 Dihydrolipoyl-transacetylase; dihydrolipoamide ace 84.25
1scz_A233 E2, dihydrolipoamide succinyltransferase; COA-depe 84.24
2ii3_A262 Lipoamide acyltransferase component of branched-C 83.08
3mae_A256 2-oxoisovalerate dehydrogenase E2 component, dihyd 80.5
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Back     alignment and structure
Probab=100.00  E-value=3.3e-42  Score=291.12  Aligned_cols=175  Identities=36%  Similarity=0.587  Sum_probs=149.0

Q ss_pred             CCCcceEEEEeeEEEeCCCCCCCCCceeeCCcCcccccCcceEEEEEEeCCCCC--ChhHHHHHHHHHHHHhcccccCCc
Q 047791            1 MERALEVQVLARESIKPAYPTPQHLRNFKLSLMDQINFPVYVSTIFLYKADNNV--RAEQMSQRLKSSLSKTLTKFYPFA   78 (177)
Q Consensus         1 ~~~~~~v~i~~~~~V~P~~~~p~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~--~~~~~~~~L~~sL~~~L~~~p~La   78 (177)
                      |+  |+|+|.++++|+|+.|+|.+.+.++||+||+..++.|++.+|||+.++..  +...++++||+||+++|++|||||
T Consensus         1 m~--m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plA   78 (421)
T 2bgh_A            1 MA--PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLA   78 (421)
T ss_dssp             -----CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGG
T ss_pred             CC--ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhc
Confidence            55  77999999999999988865568999999998778999999999976531  356789999999999999999999


Q ss_pred             eeecCceeEEeCCCCeEEEEEeeceeccccCCC-CChhhhcccCCCCCCCCCC-CCCCCCeeEEEEEEecCCeEEEEecc
Q 047791           79 GRVKDDFSIECNDEGAEYVEALANGFLFEYLQK-PDQNLLRDFHPFNYAESPV-ASNGCPMLRIQATFFKCGGLAITICT  156 (177)
Q Consensus        79 Grl~~~~~i~~~~~gv~~~~a~~~~s~~~l~~~-p~~~~~~~l~p~~~~~~~~-~~~~~pll~vQvt~f~cGG~~lg~~~  156 (177)
                      |||+++++|+||++||.|++|++|.+++|+.+. |+...+++|+|.......+ ...+.|++.+|+|+|+|||++||+++
T Consensus        79 GRl~~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~  158 (421)
T 2bgh_A           79 GRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNL  158 (421)
T ss_dssp             SEEETTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEE
T ss_pred             cccCCCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEEEe
Confidence            999988999999999999999999999998765 6555667888866211000 03458999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHHHhcC
Q 047791          157 CHKLIDGVSLGIFVNSWTTTA  177 (177)
Q Consensus       157 ~H~v~Dg~~~~~fl~~Wa~~~  177 (177)
                      ||.++||.|+.+|+++||++|
T Consensus       159 ~H~v~Dg~~~~~fl~~wa~~~  179 (421)
T 2bgh_A          159 SHKIADVLSLATFLNAWTATC  179 (421)
T ss_dssp             ETTTCCHHHHHHHHHHHHHHH
T ss_pred             eEEechHHHHHHHHHHHHHHh
Confidence            999999999999999999875
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Back     alignment and structure
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Back     alignment and structure
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Back     alignment and structure
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Back     alignment and structure
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} Back     alignment and structure
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} Back     alignment and structure
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A* Back     alignment and structure
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A* Back     alignment and structure
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728} Back     alignment and structure
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens} Back     alignment and structure
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A Back     alignment and structure
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A Back     alignment and structure
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A* Back     alignment and structure
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query177
d1q9ja1175 Polyketide synthase associated protein 5, PapA5 {M 97.84
d1l5aa1174 VibH {Vibrio cholerae [TaxId: 666]} 97.76
d3claa_213 Chloramphenicol acetyltransferase, CAT {Escherichi 88.91
d1q23a_214 Chloramphenicol acetyltransferase, CAT {Escherichi 88.84
d1b5sa_242 Dihydrolipoamide acetyltransferase {Bacillus stear 81.36
d1dpba_243 Dihydrolipoamide acetyltransferase {Azotobacter vi 80.15
>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: NRPS condensation domain (amide synthase)
domain: Polyketide synthase associated protein 5, PapA5
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.84  E-value=5.6e-05  Score=53.57  Aligned_cols=128  Identities=15%  Similarity=0.149  Sum_probs=72.2

Q ss_pred             eeCCcCccccc--CcceEEEEEEeCCCCCChhHHHHHHHHHHHHhcccccCCceeecCceeEEeCCCCeEEEEEeec---
Q 047791           28 FKLSLMDQINF--PVYVSTIFLYKADNNVRAEQMSQRLKSSLSKTLTKFYPFAGRVKDDFSIECNDEGAEYVEALAN---  102 (177)
Q Consensus        28 ~~LS~lD~~~~--~~y~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~i~~~~~gv~~~~a~~~---  102 (177)
                      -+|++.++...  ..++...+-.+.+-      ..++|++++..++.++|.|..+++.      ++.|.........   
T Consensus         8 r~l~~~e~~~~~~~~~~~~~~~l~g~l------d~~~l~~A~~~lv~rh~~LRt~f~~------~~~~~~~~~~~~~~~~   75 (175)
T d1q9ja1           8 RKLSHSEEVFAQYEVFTSMTIQLRGVI------DVDALSDAFDALLETHPVLASHLEQ------SSDGGWNLVADDLLHS   75 (175)
T ss_dssp             EECCHHHHHHHHTTCEEEEEEEEESCC------CHHHHHHHHHHHHHHCGGGSEEEEE------CTTSSEEEEECCSSSC
T ss_pred             HHhCHHhhhcccCceEEEEEEEEcCCC------CHHHHHHHHHHHHHhchhheEEEEE------eCCeeEEEEECCCCCc
Confidence            46888887653  34555555444433      5889999999999999999998851      1111111111100   


Q ss_pred             -eeccccCCCCChhhhcccCCCCCCCCCCCCCCCCeeEEEEEEecCCeEEEEeccccccchhhhHHHHHHHHHh
Q 047791          103 -GFLFEYLQKPDQNLLRDFHPFNYAESPVASNGCPMLRIQATFFKCGGLAITICTCHKLIDGVSLGIFVNSWTT  175 (177)
Q Consensus       103 -~s~~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~pll~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl~~Wa~  175 (177)
                       ....+...... .....-.+..    .  ..+.|+..+.+..- .++..|.+.+||.++||.|+..|++.+.+
T Consensus        76 ~~~~~d~~~~~~-~~~~~~~~~~----l--~~~~~l~~~~i~~~-~~~~~l~l~~HH~i~Dg~S~~~ll~el~~  141 (175)
T d1q9ja1          76 GICVIDGTAATN-GSPSGNAELR----L--DQSVSLLHLQLILR-EGGAELTLYLHHCMADGHHGAVLVDELFS  141 (175)
T ss_dssp             CCEEEC-------------CCCC----C--CTTTCSEEEEEECC-SSSCEEEEEEEGGGCCHHHHHHHHHHHHH
T ss_pred             cEEEEEcccchh-HHHHhhcccC----c--cCCCCeEEEEEEec-CCeEEEEEEccccccCHhHHHHHHHHHHH
Confidence             01111111000 0001111111    1  23456666555533 47888899999999999999999988764
>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d3claa_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q23a_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1b5sa_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1dpba_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure