Citrus Sinensis ID: 047897

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230--
YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQK
cccccccccccccccHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHcccEEEEEEcccHHHHHHHHHccccccccEEEEEccccccccccccEEEEcccccccHHHHHHHccccccccEEEEEEHHHHHHHHccccccccccHHHHHHHHHcccEEEEECccccccccccccEEEEEEECccccccccHHHHHHHHHHHHcHHHHHHHHHHccHHHHHHHHHHcccc
*IFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLS***
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YIFFHKSKGQHILTNQRVLDSIVRKSSINPDDTVLEIGPGTGNLTLKLLEVSKKVHAIEIDERMVEILNRRAADSGFHDRLNVISKDALKTEFPQFDLVVANIPYGISSPLVAKLVYGTKSFRSATLLLQKEFARRLLASPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKAEIPDVNLDEWRAFTRTCFSKKNKTLGATFKQKKKVIELLRLSKQK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ribosomal RNA small subunit methyltransferase A Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.probableB4S787
Ribosomal RNA small subunit methyltransferase A Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.probableQ8EU92
Probable dimethyladenosine transferase Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA in the 40S particle.probableQ09522

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.1.-.-Transferring one-carbon groups.probable
2.1.1.-15-hydroxyprostaglandin-I dehydrogenase (NADP(+)).probable
2.1.1.182Transferred entry: 2.1.1.181, 2.1.1.182, 2.1.1.183 and 2.1.1.184.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2H1R, chain A
Confidence level:very confident
Coverage over the Query: 11-219
View the alignment between query and template
View the model in PyMOL