Citrus Sinensis ID: 048144

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130---
MSRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLGCGTFSGALGATCVYPLQVVRTRMQAQRMNTESAYTGMSDVFKRTFKSEGLRGFYKGLFPNLLKVVPSASITYM
cHHHHHHHHccccccccccHHHHHHHccHHcHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHHHHHHcccccccccccccccccccccEEcc
cHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccHHEEccccHHHHHHccHHHEEEc
MSRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYilhdsepgplvqlgcgtfsgalgatcvypLQVVRTRMQAQRMNTESAYTGMSDVFKRtfkseglrgfyKGLFpnllkvvpsasitym
MSRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLGCGTFSGALGATCVYPLQVVRTRMQAQRMntesaytgmsdvFKRTFKSEGLRGFykglfpnllkvvpsasitym
MSRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLGCGTFSGALGATCVYPLQVVRTRMQAQRMNTESAYTGMSDVFKRTFKSEGLRGFYKGLFPNLLKVVPSASITYM
*****LVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLGCGTFSGALGATCVYPLQVVRTRMQAQRMNTESAYTGMSDVFKRTFKSEGLRGFYKGLFPNLLKVVP*******
MSRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKK********GPLVQLGCGTFSGALGATCVYPLQVVRTRMQAQ*****SAYTGMSDVFKRTFKSEGLRGFYKGLFPNLLKVVPSASITYM
MSRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLGCGTFSGALGATCVYPLQVVRTRMQAQRMNTESAYTGMSDVFKRTFKSEGLRGFYKGLFPNLLKVVPSASITYM
MSRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLGCGTFSGALGATCVYPLQVVRTRMQAQRMNTESAYTGMSDVFKRTFKSEGLRGFYKGLFPNLLKVVPSASITYM
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooo
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MSRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLGCGTFSGALGATCVYPLQVVRTRMQAQRMNTESAYTGMSDVFKRTFKSEGLRGFYKGLFPNLLKVVPSASITYM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query133 2.2.26 [Sep-21-2011]
Q9BV35468 Calcium-binding mitochond yes no 0.992 0.282 0.503 4e-32
Q0V7M4469 Calcium-binding mitochond yes no 0.992 0.281 0.488 2e-31
Q6GQS1467 Calcium-binding mitochond yes no 0.992 0.282 0.488 2e-31
A2ASZ8469 Calcium-binding mitochond no no 0.992 0.281 0.481 3e-31
Q6NYZ6469 Calcium-binding mitochond yes no 0.992 0.281 0.488 6e-31
Q6KCM7469 Calcium-binding mitochond no no 0.992 0.281 0.488 7e-31
Q8K3P6469 Calcium-binding mitochond no no 0.992 0.281 0.473 8e-31
Q7ZYD5514 Calcium-binding mitochond N/A no 0.984 0.254 0.492 2e-30
Q66L49477 Calcium-binding mitochond no no 0.992 0.276 0.473 2e-30
Q5XHA0473 Calcium-binding mitochond yes no 0.992 0.279 0.466 4e-30
>sp|Q9BV35|SCMC3_HUMAN Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2 Back     alignment and function desciption
 Score =  136 bits (342), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 67/133 (50%), Positives = 86/133 (64%), Gaps = 1/133 (0%)

Query: 2   SRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDS-EPGPLVQLG 60
           +R IL +EGPRAFYRG +P++LGIIPYAGIDLA YE+ K    +   HDS +PG LV L 
Sbjct: 322 ARRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLKNWWLQQYSHDSADPGILVLLA 381

Query: 61  CGTFSGALGATCVYPLQVVRTRMQAQRMNTESAYTGMSDVFKRTFKSEGLRGFYKGLFPN 120
           CGT S   G    YPL +VRTRMQAQ          M  + +     EG+RG Y+G+ PN
Sbjct: 382 CGTISSTCGQIASYPLALVRTRMQAQASIEGGPQLSMLGLLRHILSQEGMRGLYRGIAPN 441

Query: 121 LLKVVPSASITYM 133
            +KV+P+ SI+Y+
Sbjct: 442 FMKVIPAVSISYV 454
Calcium-dependent mitochondrial solute carrier. Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. May act as a ATP-Mg/Pi exchanger that mediates the transport of Mg-ATP in exchange for phosphate, catalyzing the net uptake or efflux of adenine nucleotides into or from the mitochondria.
Homo sapiens (taxid: 9606)
>sp|Q0V7M4|SCMC2_BOVIN Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Bos taurus GN=SLC25A25 PE=2 SV=1 Back     alignment and function description
>sp|Q6GQS1|SCMC3_MOUSE Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Mus musculus GN=Slc25a23 PE=2 SV=1 Back     alignment and function description
>sp|A2ASZ8|SCMC2_MOUSE Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Mus musculus GN=Slc25a25 PE=2 SV=1 Back     alignment and function description
>sp|Q6NYZ6|SCM2A_DANRE Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1 Back     alignment and function description
>sp|Q6KCM7|SCMC2_HUMAN Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Homo sapiens GN=SLC25A25 PE=1 SV=1 Back     alignment and function description
>sp|Q8K3P6|SCMC2_RAT Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Rattus norvegicus GN=Slc25a25 PE=1 SV=1 Back     alignment and function description
>sp|Q7ZYD5|SCMC2_XENLA Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1 Back     alignment and function description
>sp|Q66L49|SCMC1_DANRE Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|Q5XHA0|SCMC1_XENTR Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query133
255543499 469 ADP,ATP carrier protein, putative [Ricin 0.977 0.277 0.872 1e-63
317106605 505 JHL07K02.2 [Jatropha curcas] 0.894 0.235 0.804 2e-59
225451643 489 PREDICTED: calcium-binding mitochondrial 0.977 0.265 0.804 2e-59
356571647 477 PREDICTED: calcium-binding mitochondrial 0.962 0.268 0.819 2e-59
225456523 511 PREDICTED: calcium-binding mitochondrial 0.924 0.240 0.796 2e-59
147860847 496 hypothetical protein VITISV_022552 [Viti 0.924 0.247 0.796 3e-59
297734527 509 unnamed protein product [Vitis vinifera] 0.962 0.251 0.796 5e-59
255540015 510 Succinate/fumarate mitochondrial transpo 0.984 0.256 0.804 5e-59
356560416 473 PREDICTED: calcium-binding mitochondrial 0.962 0.270 0.812 6e-59
125597796 469 hypothetical protein OsJ_21908 [Oryza sa 0.984 0.279 0.789 2e-58
>gi|255543499|ref|XP_002512812.1| ADP,ATP carrier protein, putative [Ricinus communis] gi|223547823|gb|EEF49315.1| ADP,ATP carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  247 bits (631), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 116/133 (87%), Positives = 124/133 (93%)

Query: 1   MSRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLG 60
           MSRDI VQEGPRAFYRGLVPSLLGIIPYAGIDLAAYE+FK+MSKKYIL DSEPGPLVQLG
Sbjct: 325 MSRDIWVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYETFKDMSKKYILRDSEPGPLVQLG 384

Query: 61  CGTFSGALGATCVYPLQVVRTRMQAQRMNTESAYTGMSDVFKRTFKSEGLRGFYKGLFPN 120
           CGT SGALGATCVYPLQVVRTRMQA R NT +AY GMSDVF+RTF+ EG+RG YKG+FPN
Sbjct: 385 CGTLSGALGATCVYPLQVVRTRMQAHRTNTGTAYEGMSDVFRRTFQHEGIRGLYKGIFPN 444

Query: 121 LLKVVPSASITYM 133
           +LKVVPSASITYM
Sbjct: 445 MLKVVPSASITYM 457

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|317106605|dbj|BAJ53112.1| JHL07K02.2 [Jatropha curcas] Back     alignment and taxonomy information
>gi|225451643|ref|XP_002277297.1| PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1 [Vitis vinifera] gi|296082251|emb|CBI21256.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356571647|ref|XP_003553987.1| PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like [Glycine max] Back     alignment and taxonomy information
>gi|225456523|ref|XP_002284731.1| PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147860847|emb|CAN83157.1| hypothetical protein VITISV_022552 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297734527|emb|CBI15774.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255540015|ref|XP_002511072.1| Succinate/fumarate mitochondrial transporter, putative [Ricinus communis] gi|223550187|gb|EEF51674.1| Succinate/fumarate mitochondrial transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356560416|ref|XP_003548488.1| PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like [Glycine max] Back     alignment and taxonomy information
>gi|125597796|gb|EAZ37576.1| hypothetical protein OsJ_21908 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query133
TAIR|locus:2157423487 APC2 "ATP/phosphate carrier 2" 0.962 0.262 0.751 5.2e-49
TAIR|locus:2183314479 APC3 "ATP/phosphate carrier 3" 0.962 0.267 0.691 1.6e-45
TAIR|locus:2159168478 APC1 "ATP/phosphate carrier 1" 0.962 0.267 0.649 1.2e-44
UNIPROTKB|Q9BV35468 SLC25A23 "Calcium-binding mito 0.992 0.282 0.503 1.8e-30
UNIPROTKB|Q0V7M4469 SLC25A25 "Calcium-binding mito 0.992 0.281 0.488 3.8e-30
UNIPROTKB|C8C417501 SLC25A25 "Solute carrier famil 0.992 0.263 0.488 4.3e-30
MGI|MGI:1915913469 Slc25a25 "solute carrier famil 0.992 0.281 0.481 7.9e-30
RGD|628666469 Slc25a25 "solute carrier famil 0.992 0.281 0.473 1.6e-29
UNIPROTKB|Q8K3P6469 Slc25a25 "Calcium-binding mito 0.992 0.281 0.473 1.6e-29
UNIPROTKB|Q6KCM7469 SLC25A25 "Calcium-binding mito 0.992 0.281 0.488 1.6e-29
TAIR|locus:2157423 APC2 "ATP/phosphate carrier 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
 Identities = 100/133 (75%), Positives = 112/133 (84%)

Query:     1 MSRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLG 60
             +++DILV EGPRAFY+GL PSLLGIIPYAGIDLAAYE+ K++S+ YIL D+EPGPLVQLG
Sbjct:   348 LTKDILVHEGPRAFYKGLFPSLLGIIPYAGIDLAAYETLKDLSRTYILQDAEPGPLVQLG 407

Query:    61 CGTFSGALGATCVYPLQVVRTRMQAQRMNTESAYTGMSDVFKRTFKSEGLRGFYKGLFPN 120
             CGT SGALGATCVYPLQVVRTRMQA+R     A T MS VF+RT   EG R  YKGL PN
Sbjct:   408 CGTISGALGATCVYPLQVVRTRMQAER-----ARTSMSGVFRRTISEEGYRALYKGLLPN 462

Query:   121 LLKVVPSASITYM 133
             LLKVVP+ASITYM
Sbjct:   463 LLKVVPAASITYM 475
GO:0005509 "calcium ion binding" evidence=IEA;ISS;IDA
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005739 "mitochondrion" evidence=IDA
GO:0015867 "ATP transport" evidence=IMP
GO:0030048 "actin filament-based movement" evidence=RCA
GO:0051645 "Golgi localization" evidence=RCA
GO:0051646 "mitochondrion localization" evidence=RCA
GO:0060151 "peroxisome localization" evidence=RCA
TAIR|locus:2183314 APC3 "ATP/phosphate carrier 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159168 APC1 "ATP/phosphate carrier 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BV35 SLC25A23 "Calcium-binding mitochondrial carrier protein SCaMC-3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q0V7M4 SLC25A25 "Calcium-binding mitochondrial carrier protein SCaMC-2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|C8C417 SLC25A25 "Solute carrier family 25 member 25" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1915913 Slc25a25 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|628666 Slc25a25 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q8K3P6 Slc25a25 "Calcium-binding mitochondrial carrier protein SCaMC-2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q6KCM7 SLC25A25 "Calcium-binding mitochondrial carrier protein SCaMC-2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00018059001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (469 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query133
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-25
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-11
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 4e-11
PTZ00169 300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-06
PTZ00169 300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 0.003
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score = 92.7 bits (231), Expect = 1e-25
 Identities = 38/83 (45%), Positives = 51/83 (61%)

Query: 51  SEPGPLVQLGCGTFSGALGATCVYPLQVVRTRMQAQRMNTESAYTGMSDVFKRTFKSEGL 110
           S    L  L  G  +GA+ AT  YPL VV+TR+Q+        Y G+ D FK+ +K EG+
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGI 60

Query: 111 RGFYKGLFPNLLKVVPSASITYM 133
           RG YKGL PNLL+V P+A+I + 
Sbjct: 61  RGLYKGLLPNLLRVAPAAAIYFG 83

Length = 96
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 133
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 99.97
KOG0764 299 consensus Mitochondrial FAD carrier protein [Energ 99.97
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.97
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 99.97
KOG0752 320 consensus Mitochondrial solute carrier protein [En 99.96
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.96
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.96
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 99.96
PTZ00168259 mitochondrial carrier protein; Provisional 99.96
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.96
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.96
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.95
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.95
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.95
KOG0753 317 consensus Mitochondrial fatty acid anion carrier p 99.95
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.94
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.94
KOG0757 319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.94
KOG0760 302 consensus Mitochondrial carrier protein MRS3/4 [En 99.94
PTZ00168 259 mitochondrial carrier protein; Provisional 99.94
KOG0762 311 consensus Mitochondrial carrier protein [Energy pr 99.94
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.94
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 99.93
KOG0759 286 consensus Mitochondrial oxoglutarate/malate carrie 99.93
KOG0765333 consensus Predicted mitochondrial carrier protein 99.93
KOG0758 297 consensus Mitochondrial carnitine-acylcarnitine ca 99.92
KOG0766297 consensus Predicted mitochondrial carrier protein 99.92
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.92
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.91
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.91
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.91
KOG0754 294 consensus Mitochondrial oxodicarboxylate carrier p 99.91
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 99.91
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.9
KOG0036463 consensus Predicted mitochondrial carrier protein 99.88
KOG0765 333 consensus Predicted mitochondrial carrier protein 99.87
KOG0768 323 consensus Mitochondrial carrier protein PET8 [Ener 99.87
KOG0766 297 consensus Predicted mitochondrial carrier protein 99.87
KOG0770353 consensus Predicted mitochondrial carrier protein 99.85
KOG0036 463 consensus Predicted mitochondrial carrier protein 99.84
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.83
KOG0763 301 consensus Mitochondrial ornithine transporter [Ene 99.83
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.82
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.82
KOG0755 320 consensus Mitochondrial oxaloacetate carrier prote 99.81
KOG0749 298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.78
KOG0756 299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.78
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.75
KOG0750 304 consensus Mitochondrial solute carrier protein [En 99.72
KOG0769308 consensus Predicted mitochondrial carrier protein 99.69
KOG2745 321 consensus Mitochondrial carrier protein [General f 99.68
KOG1519297 consensus Predicted mitochondrial carrier protein 99.55
KOG2954427 consensus Mitochondrial carrier protein [General f 99.28
KOG1519 297 consensus Predicted mitochondrial carrier protein 99.07
KOG2745321 consensus Mitochondrial carrier protein [General f 99.06
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 98.85
KOG2954427 consensus Mitochondrial carrier protein [General f 95.83
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=2e-33  Score=194.72  Aligned_cols=132  Identities=45%  Similarity=0.780  Sum_probs=116.2

Q ss_pred             cccchhhcchhhhhcchhHHHhhHhhhhhhhHHhhHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhhccHHHHHH
Q 048144            2 SRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLGCGTFSGALGATCVYPLQVVRT   81 (133)
Q Consensus         2 ~~~i~~~~Gi~gly~G~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~   81 (133)
                      +++|+++||++|||||+.|++++..|+.++.|.+||.++++......++++.+.+..+++|++||+++.++++|+|+||.
T Consensus       170 ~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRr  249 (320)
T KOG0752|consen  170 FKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTVRR  249 (320)
T ss_pred             HHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHH
Confidence            57899999999999999999999999999999999999995222112224566778999999999999999999999999


Q ss_pred             HHHhhccC---CCcccCcHHHHHHHHHHhhhHhHhhcchhhhhhhhhcccceecC
Q 048144           82 RMQAQRMN---TESAYTGMSDVFKRTFKSEGLRGFYKGLFPNLLKVVPSASITYM  133 (133)
Q Consensus        82 r~q~~~~~---~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~f~  133 (133)
                      |||..+..   ....+++++||+++|+++||++|||||+.|++++.+|..++.|+
T Consensus       250 rmQ~~~~~~~~~~~~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~  304 (320)
T KOG0752|consen  250 RMQLGGLKYFGGGFRYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFT  304 (320)
T ss_pred             HHhccCccccccccccccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeee
Confidence            99998753   23456899999999999999999999999999999999999885

>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query133
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-11
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 6e-08
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure 
Iteration: 1

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 9   EGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLGCGTFSGAL 68
           EGPR+ Y GLV  L   + +A + +  Y+S K+    Y       G   +L  G+ +GAL
Sbjct: 61  EGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQF---YTKGSEHAGIGSRLLAGSTTGAL 117
Query: 69  GATCVYPLQVVRTRMQAQ-RMNTESAYTGMSDVFKRTFKSEGLRGFYKGLFPNLLK 123
                 P  VV+ R QAQ R      Y    + +K   + EG+RG +KG  PN+ +
Sbjct: 118 AVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVAR 173
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query133
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-52
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 9e-34
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-21
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-30
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-26
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 7e-14
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-05
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  166 bits (423), Expect = 1e-52
 Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 7/133 (5%)

Query: 3   RDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLGCG 62
             I   +G R  Y+G   S+ GII Y       Y++     K  +        +V     
Sbjct: 161 TKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTA----KGMLPDPKNVHIIVSWMIA 216

Query: 63  TFSGALGATCVYPLQVVRTRMQAQRM--NTESAYTGMSDVFKRTFKSEGLRGFYKGLFPN 120
               A+     YP   VR RM  Q      +  YTG  D +++  K EG + F+KG + N
Sbjct: 217 QTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSN 276

Query: 121 LLKVVPSASITYM 133
           +L+ +  A    +
Sbjct: 277 VLRGMGGA-FVLV 288
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query133
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.97
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 99.97
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.97
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 99.97
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=99.97  E-value=1.1e-31  Score=187.51  Aligned_cols=126  Identities=21%  Similarity=0.330  Sum_probs=113.5

Q ss_pred             cccchhhcchhhhhcchhHHHhhHhhhhhhhHHhhHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhhccHHHHHH
Q 048144            2 SRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLGCGTFSGALGATCVYPLQVVRT   81 (133)
Q Consensus         2 ~~~i~~~~Gi~gly~G~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~   81 (133)
                      +++|+++||++|||+|+.|.+++.++.++++|.+||.+++.+.+..  ....+....+++|++||++++++++|+|+||+
T Consensus       151 ~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~--~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvkt  228 (303)
T 2lck_A          151 YKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAN--LMTDDLPCHFTSAFGAGFCTTVIASPVDVVKT  228 (303)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTT--SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCchHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence            5789999999999999999999999999999999999999875432  22455667899999999999999999999999


Q ss_pred             HHHhhccCCCcccCcHHHHHHHHHHhhhHhHhhcchhhhhhhhhcccceec
Q 048144           82 RMQAQRMNTESAYTGMSDVFKRTFKSEGLRGFYKGLFPNLLKVVPSASITY  132 (133)
Q Consensus        82 r~q~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~f  132 (133)
                      |+|.+..   ..|+++++|+++|+++||++|||||+.++++|.+|.++++|
T Consensus       229 rlq~~~~---~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f  276 (303)
T 2lck_A          229 RYMNSAL---GQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMF  276 (303)
T ss_dssp             HHTTCCS---SSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHH
T ss_pred             HHHhccc---cccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHH
Confidence            9999753   36999999999999999999999999999999999988876
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 133
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-18
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-10
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 6e-06
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-05
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 76.3 bits (186), Expect = 3e-18
 Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 6/123 (4%)

Query: 10  GPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLGCGTFSGALG 69
           G R  Y+G   S+ GII Y       Y++ K M             +V         A+ 
Sbjct: 167 GLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVH----IIVSWMIAQTVTAVA 222

Query: 70  ATCVYPLQVVRTRMQAQ--RMNTESAYTGMSDVFKRTFKSEGLRGFYKGLFPNLLKVVPS 127
               YP   VR RM  Q  R   +  YTG  D +++  K EG + F+KG + N+L+ +  
Sbjct: 223 GLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG 282

Query: 128 ASI 130
           A +
Sbjct: 283 AFV 285
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query133
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.95
d1okca_ 292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.91
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=99.95  E-value=4.4e-29  Score=171.37  Aligned_cols=123  Identities=28%  Similarity=0.466  Sum_probs=109.3

Q ss_pred             cccchhhcchhhhhcchhHHHhhHhhhhhhhHHhhHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhhccHHHHHH
Q 048144            2 SRDILVQEGPRAFYRGLVPSLLGIIPYAGIDLAAYESFKEMSKKYILHDSEPGPLVQLGCGTFSGALGATCVYPLQVVRT   81 (133)
Q Consensus         2 ~~~i~~~~Gi~gly~G~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~   81 (133)
                      +++++++||+++||+|+.+.+++.++.++++|..||.+++.+.+    .........++++.+++++++++++|+|+||+
T Consensus       159 ~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~a~~~t~P~dvvkt  234 (292)
T d1okca_         159 ITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD----PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRR  234 (292)
T ss_dssp             HHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCG----GGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhccc----ccccchHHHHHHHHHHHHHHhhccccHHHHHH
Confidence            46788999999999999999999999999999999999986643    33456778899999999999999999999999


Q ss_pred             HHHhhccCC--CcccCcHHHHHHHHHHhhhHhHhhcchhhhhhhhhccc
Q 048144           82 RMQAQRMNT--ESAYTGMSDVFKRTFKSEGLRGFYKGLFPNLLKVVPSA  128 (133)
Q Consensus        82 r~q~~~~~~--~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~  128 (133)
                      |+|.+....  +..|.++++++++++|+||+++||||+.++++|.+|..
T Consensus       235 R~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~~~  283 (292)
T d1okca_         235 RMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGA  283 (292)
T ss_dssp             HHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHHHH
Confidence            999976543  34789999999999999999999999999999987743
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure